CmaCh20G007930.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G007930.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr20 : 3727585 .. 3728787 (-)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCGCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTATGTGGGGGAAATCCAAACAAGGAGATTTGTGGTTCCAATTTCTTATTTGAACCATCCTTCTTTTCTAAACCTACTAAAAAGGGCCGAGGAAGAGTTCGGATTCAATCATCCAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGTTGCAGATATTATGAGAGATGGAGAAGAAAGATCAACCATCCACACAGTTTTGCCAACCTTGTTTTTTTTTTTTTTTTTTCTTTTCAACTTGTCCTAGTCATAGTAGAATATCAATGTATAGGAAGTACATCAAAATGACTGTATTTAGGGTGGAAAACTGATCTTCCCACCTGAAACGGCAATAGCACATAAACACTGCAATTGCACGGAGCAGTAAAGTGACTTTTTTTTCAAAGAGAAAACTATTCCCCATCAACGCATTCAATATATATGCCATTTTCCTCTCTGAATTTCATCGAAGTTCTCATATTCTTATGTTGAATACAATTACATGGATGAATCTTGAGTAGGAGTCCCAGATTGAAACAATTGAAAATAATATATTGAACTTAAGTAAATAAGAATAATAATAATAAATAAATAAGGAGAACTTTAAAGTGCCCCTCCCAGAAACCAAAGCTTTTTGACTTGTCATCTTGAAGCAATTAACTCTCTTTATGTGCTGAAATCGTATCTAATATGTTATCACGACCTAACCAATAGGATTTTTTTAACACTGAAATTGTGAAAATCTAATCTAGTATGTGACGGAAATCAATTTTAATCTCCATTATTACGGTGCTTTGCTGTGTTCTCAATGTCATAAAAAAAAAAAATTGGAGGAGAGAGAGAGAAGAAAAAAAAATCTTATGGTAGACGGGTTCAAGGGAAACAGGCTCTTTTTATTATTACACTTCCACATGTTTCAAGTTTCACTAAACAAAATGCACTGCAGGTTTAATCCATATCGGCTGGCATGGAAGCTGCTCAAAATTTAATTACATTGAAAAAGAAATATAAGAATAACCGGAAACAATCACTTTAAGATATAATTTACCGATGCTTATACAATGTATTTGTCTACTAGGATGCTGGTGATTTGA

mRNA sequence

ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCGCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTATGTGGGGGAAATCCAAACAAGGAGATTTGTGGTTCCAATTTCTTATTTGAACCATCCTTCTTTTCTAAACCTACTAAAAAGGGCCGAGGAAGAGTTCGGATTCAATCATCCAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGATGCTGGTGATTTGA

Coding sequence (CDS)

ATGGGAATCCGTTTGCCTTCAATTCTTCTTCATACCAAGCAAATTCTCAAAATGCAGGGCGCTTCTTCAAAAGTAAAGTCCAATATTCCCAAAGGACATATTGCAGTCTATGTGGGGGAAATCCAAACAAGGAGATTTGTGGTTCCAATTTCTTATTTGAACCATCCTTCTTTTCTAAACCTACTAAAAAGGGCCGAGGAAGAGTTCGGATTCAATCATCCAATGGGTGGTCTGACAATTCCCTGCAGAGAAGAGACCTTCATTGATCTCACTTCTAGGATGCTGGTGATTTGA

Protein sequence

MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRMLVI

Homology

[Close]

BLAST of CmaCh20G007930.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-23
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VPISYLN PSF  LL ++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSR 94
          FGF+HPMGGLTIPC E+TFI++TSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmaCh20G007930.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VP+SYLN PSF  LL ++EEE
Sbjct: 7  LLGAKKILSR---STGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007930.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VP+SYLN PSF  LL ++E+E
Sbjct: 7  LLGAKKILSR---STAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007930.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL    A+       PKG +AVYVGE Q +R++VP+SYLN PSF  LL ++EEE
Sbjct: 7  LLVAKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007930.1 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 51/86 (59.30%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL    AS+      PKG +AVYVGE Q +R++VP+SYL+ PSF  LL ++EEE
Sbjct: 7  LLGAKKILSRSTASAA-----PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSRM 95
          FGF+HPMGGLTIPC E+TFI++TSR+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmaCh20G007930.1 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-43
Identity = 87/94 (92.55%), Postives = 93/94 (98.94%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPSILLHTKQILK+QG S+KVKS+IPKGHIAVYVGEIQT+RFVVPIS+LNHPSFLN
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR+
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL 94

[Close]

BLAST of CmaCh20G007930.1 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.0e-35
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIR+PS+LL+ KQI +MQ  S++  SNIPKGHIAVYVGEI+ +RFVVP+SYLNHP+FL+
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL RAEEEFGFNHP GGLTIPC+E+ FIDLTS++
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKL 94

[Close]

BLAST of CmaCh20G007930.1 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.8e-35
Identity = 71/94 (75.53%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MG RLPSIL   KQILK Q  S + +S++PKGHIAVYVGEIQ +RF+VPISYLNHPSFL+
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL+RAEEEFGFNHP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL 94

[Close]

BLAST of CmaCh20G007930.1 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.8e-34
Identity = 69/94 (73.40%), Postives = 83/94 (88.30%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPS+LL  KQILKM+  S++ +S++PKGHI VYVGE Q +RF+VPISYLNHPSF+N
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL RAEEEFGF+HP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRL 94

[Close]

BLAST of CmaCh20G007930.1 vs. TrEMBL
Match: A0A061DYL9_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006722 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-33
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 1   MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
           MGIR+PS++LH KQ+LK+Q   S+ ++++PKGHIAVYVGEIQ  R+VVPISYLNHPSFL+
Sbjct: 25  MGIRIPSVILHAKQVLKLQ---SRNQTDVPKGHIAVYVGEIQKTRYVVPISYLNHPSFLD 84

Query: 61  LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
           LL RA+EEFGFNHPMGGLTIPC E+ FIDLTSR+
Sbjct: 85  LLNRAQEEFGFNHPMGGLTIPCDEDAFIDLTSRL 115

[Close]

BLAST of CmaCh20G007930.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-28
Identity = 58/97 (59.79%), Postives = 75/97 (77.32%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILK----MQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHP 60
          M IR+P +L  +KQIL+    +  +SS    ++PKG++AVYVGE   +RFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR 94
          SF +LL++AEEEFGF+HPMGGLTIPC EE FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmaCh20G007930.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-28
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEI-QTRRFVVPISYLNHPSFL 60
          M IR+  +L  +KQ+LK    SS   + IPKGH+AVYVGE+ Q RRFVVP++YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 NLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
           LL++AEEEFGF+HPMGGLTIPC E+ FIDL SR+
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of CmaCh20G007930.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-27
Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 1   MGIRLPSILLHTKQILKMQG------ASSKVKSNIPKGHIAVYVGE---IQTRRFVVPIS 60
           MG+   +I   TKQILK+         SS    ++PKGH+AVYVGE   ++ +RFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRML 96
           +LNHPSF   L RAEEEFGFNHPMGGLTIPCREE F+DL +  L
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of CmaCh20G007930.1 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-26
Identity = 60/92 (65.22%), Postives = 70/92 (76.09%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQT--RRFVVPISYLNHPSF 60
          M IRL S ++++KQ       S K +S +PKGH+AVYVGE     +RFVVPISYLNHPSF
Sbjct: 1  MAIRL-SRVINSKQ-------SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 LNLLKRAEEEFGFNHPMGGLTIPCREETFIDL 91
            LL RAEEEFGFNHP+GGLTIPCREETF+ L
Sbjct: 61 QGLLSRAEEEFGFNHPIGGLTIPCREETFVGL 84

[Close]

BLAST of CmaCh20G007930.1 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 4.8e-24
Identity = 53/85 (62.35%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLNLLKRAEEE 68
          LL  K+IL     S+   S  PKG +AVYVGE Q +R++VPISYLN PSF  LL ++EEE
Sbjct: 7  LLGAKKILSR---STTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPMGGLTIPCREETFIDLTSR 94
          FGF+HPMGGLTIPC E+TFI++TSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmaCh20G007930.1 vs. NCBI nr
Match: gi|449458542|ref|XP_004147006.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-43
Identity = 87/94 (92.55%), Postives = 93/94 (98.94%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPSILLHTKQILK+QG S+KVKS+IPKGHIAVYVGEIQT+RFVVPIS+LNHPSFLN
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSR+
Sbjct: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRL 94

[Close]

BLAST of CmaCh20G007930.1 vs. NCBI nr
Match: gi|659115580|ref|XP_008457625.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42
Identity = 84/94 (89.36%), Postives = 92/94 (97.87%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIRLPSILLHTKQILK+QG S+KVKS++P+GHIAVYVGEIQT+RFVVPIS+LNHPSFLN
Sbjct: 1  MGIRLPSILLHTKQILKIQGVSTKVKSDVPRGHIAVYVGEIQTKRFVVPISFLNHPSFLN 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LLK AEEEFGFNHPMGGLTIPCREETFIDLTSR+
Sbjct: 61 LLKTAEEEFGFNHPMGGLTIPCREETFIDLTSRL 94

[Close]

BLAST of CmaCh20G007930.1 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 5.7e-35
Identity = 69/94 (73.40%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MGIR+PS+LL+ KQI +MQ  S++  SNIPKGHIAVYVGEI+ +RFVVP+SYLNHP+FL+
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL RAEEEFGFNHP GGLTIPC+E+ FIDLTS++
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKL 94

[Close]

BLAST of CmaCh20G007930.1 vs. NCBI nr
Match: gi|449458550|ref|XP_004147010.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 9.8e-35
Identity = 71/94 (75.53%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MG RLPSIL   KQILK Q  S + +S++PKGHIAVYVGEIQ +RF+VPISYLNHPSFL+
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL+RAEEEFGFNHP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL 94

[Close]

BLAST of CmaCh20G007930.1 vs. NCBI nr
Match: gi|659115590|ref|XP_008457631.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 2.8e-34
Identity = 70/94 (74.47%), Postives = 81/94 (86.17%), Query Frame = 1


Query: 1  MGIRLPSILLHTKQILKMQGASSKVKSNIPKGHIAVYVGEIQTRRFVVPISYLNHPSFLN 60
          MG RLPSIL   KQILK Q  S + +S++PKGHIAVYVGE+Q  RF+VPISYLNHPSFL+
Sbjct: 1  MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEVQKTRFLVPISYLNHPSFLD 60

Query: 61 LLKRAEEEFGFNHPMGGLTIPCREETFIDLTSRM 95
          LL+RAEEEFGFNHP GGLTIPC+EE FID+TSR+
Sbjct: 61 LLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRL 94

The following BLAST results are available for this feature:

BLAST of CmaCh20G007930.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU20_ARATH	8.6e-23	62.35	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU24_ARATH	1.1e-22	60.47	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	1.5e-22	59.30	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	1.9e-22	59.30	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU21_ARATH	2.5e-22	59.30	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of CmaCh20G007930.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPG7_CUCSA	1.4e-43	92.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	4.0e-35	73.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LIZ4_CUCSA	6.8e-35	75.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	5.8e-34	73.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]
A0A061DYL9_THECC	1.3e-33	73.40	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006722 PE=4 ...	[more]

BLAST of CmaCh20G007930.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.1e-28	59.79	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	9.4e-28	62.11	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.2e-27	58.65	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	3.0e-26	65.22	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	4.8e-24	62.35	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh20G007930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458542\|ref\|XP_004147006.1\|	2.0e-43	92.55	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115580\|ref\|XP_008457625.1\|	2.8e-42	89.36	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	5.7e-35	73.40	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|449458550\|ref\|XP_004147010.1\|	9.8e-35	75.53	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115590\|ref\|XP_008457631.1\|	2.8e-34	74.47	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh20G007930	CmaCh20G007930	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007930.1	CmaCh20G007930.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007930.1.CDS.2	CmaCh20G007930.1.CDS.2	CDS
CmaCh20G007930.1.CDS.1	CmaCh20G007930.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007930.1.exon.2	CmaCh20G007930.1.exon.2	exon
CmaCh20G007930.1.exon.1	CmaCh20G007930.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..92 score: 1.2
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..94 score: 2.1
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..94 score: 2.1