CmaCh19G005410 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G005410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ribosomal RNA small subunit methyltransferase E
Location	Cma_Chr19 : 6226516 .. 6232059 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCGCATACTTTCACTATAAGGTCCCTTCCCTACTTCCAGCGAGAGCTGAGAATTCCATGCTTGTTCAGGGTTGGAAGCTTGAAAGCGTCACACCAGCGGCAATCCTCATGTTCCATAGTTGTTCTTCTTTGCAGATGCGAACTATAGGAGCAATACGACCTCAATTGACGGAGTTATTCGACCGTTCGTGTTTCAGAAGCTTCAGAGTTAGAGCTCTCTCGTCTTCATCTCTGGCTTCCTCGAATCAATCCCGCGGTGGTCTTCCTCGCTTCTTCTCCCAAGTTCTTCCTTCTTATAAGGCAATCCATCTCTCTCTCGTGTAATTTTCATGTTTTTATATGATCGGAAATTGTTTATATAGTTGTGTATGAGGTTTTGATTGTGAAAATTTGAAGAACCGAATGATTTGCCTCGCGCTGTAGCTTTTACTGTGACTACACGAGCGGGATTGTGTTATGTTCTGAATGCGGTCTGTCCATTTGAATGGATGATTACAAACTTTTTATTTTCTAAGTGAGCCGATATTCGCCTTTCCTACCGAAAAGCTAACCGAACCGAAGGAAATTACTGGGAAGGGCTATAAAGAATCTCATTCCATCCTCCCTTTCTTCCCCTGTTTTCGAGATTGATATAGCCCTATTGAAACCTAGCGGCTAGAGTTGCATTTCCGGGCTAATAATCCACTTAATCCCCAAATAGGCACTTGAACCCTTCTCCGGCAAGGTATAGAACAACTAAGGTGTGGGTCCTCCTCGCTTTGGTTCAGCTTATGCGGTGACCGAGAAGCAAGACCTTGAACTCAACCAGCCATTGATAATCACTTTTGTGGTTCCCAATCGGGATGGAGATTCCAGTCCAGTGTAGGAGACACCTTATTCATGATCTAGGGGTCCAATGTAGCCTATGTTAAGCGGAGTGTTGGTGACTCTAAATTTTGGAAGACCAAGGAGGCGTGTCATTATGGGTGGTGTTTGATCCATGAAATGTTAATTATGGAGCTTTGTGTTCTTGTGCAAATTTGGAATGTTTTAGATGGTTCTTTGTGGGGGAATTGGTATTTATGAACTTATGAGATGGATAATGGCATTTACTAAGATGAAATTGGATAGGATGGATGGTTGTTTCCCTAATGGTATCCCTATTGGTTTCTTCAAGTAAGTCTTTTAGGAATTTGTCATATAATGATATTCTAGTGAAGCTGAACTACATTGTTTAATTTCATGTTGTAGTAAGCTTAATGCTTGATTTGATTTGATAATTTTGTAAAGTGAGATTGTGATGCTTGGTTTGATTGCGGAACTGGAACTACTGTCTTAACATATGCTTCATCGTTATCCAGGGTGATATTATTCGTCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTTTTGAGGTTGAAGACTGATGATAGGTACTATTTTTAATAGTCACTACAAGAAATAATAAATACGATAGCTTACGAAAAATGCTATCGTAGACTTTTTATAGCGTTTTTCGTACTAGTCGACATGATTCACTATTATCTGGACATGTGTGTCACTGGCTAGATCCTTCTATCTTTATCTGTTTGTTTTCTTCATGATAATTGGATGTAAATTAAAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAACGGAATCGACATTCTGGCAATGGAAGATCCAAAATCTGTTCTACCTCAAAGCACACAGTGGCATGTATTTGCAGCTTGTGGTGAGATTCTTTTGTAGAATCATTAACTGTTTACTGCATCTTGTGGCATGGAATTTAACATGTCTTTGTTTAGGTACTCTAAAGGGCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACAGTAAGTAAATGACTACGGTGTTGCAAATGAAAATTTTTACTTCCTAATTATCTTGCTGCCCCTTTCATTTTATCTAGGAACTGGGTGCCAGTAGCGTAACTCCACTGCTAACAGAACGTTGCGCTACCATATCTGATAACCGGGTGCACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTGAGTCAGTATTCAAGTAAACTTTCTTCACCTTGGGAGTGGGAACTTGAGACAGTTCAATTTGGCTTGTTGGTGTTGTCTAATTACGTTTGGGAATTTTTTATGTATCCTTCATCGCAGGTCAAAGACTGCACCAAATGAGTCTGAATTCTCCATTGAAGATTGATGGTCTTTTGCACATTGTGAGTTGCAGCACAATTTTCTTCGTGTACTTTATTGACCTTTGTGCTTGGCTTGGCTAGCATAATTTTTTTTTTTTAAATTAAAAAATCATAAAAGAATTATGGACACTTGGGATAATTTAAGAATTAAGCATATTTCGACTACAATTGGTCAAGTCCTTGTAATATTTGTTGAGGATTGTTGGGAGGGAGTTCTACGGGATGATCATGGGTTTATAAGTAAGGAATACATCACCATTGGTATCAGGCCTTTTGGGAAAACCAAAAGAAAAGTCACGAGAGATTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGGTTCCTAATATGGAATCAAAGTCATGCCCTTAACTTAGTCATATCAATAGAATCCTCAAGTGTCAAACAAACAAGTTGCTAGCCTTGAAGATGTAGTCAAAAGTGATTCATGTGTCGAACAAAGGGTATTCTTTGTTCGAGGGCTCCAGAGAAAGGAGTCAAGCCTCGATTAAGGGGAGGCTATTCGAGGGCTACATAGACCTCAGGGGAGGCTCTATGGTGTACTTTGTTCGAGAGGAGAATTATCAAGGACTGTTGAGAATTATTGGGAGGAGTCCCACGTAGACTAATTTAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTACGAGGCTTTTTGAGGAAACCCAAAGCAAAACCATGAAAGTTTATGCTCAAAGTGGACACTATTGTGGATAGTTATAGTTCCTAACATATTGTTAGTTCAAGCTCATATGTCCATTTGATGTGGCCTTCTTCATCAAATGAATGTATTTTTTCAGAAGTTGTGTTGATAACCTGAGATATACTGATAAAAACGAGCAAAACAACCTAAACAACCTAAGGGGTAGAGAGAACCCTTGGCCAGAGAAACCACAAAAGAATTTCATAGCATTCTATACTACAAGTTCTTTTTCTTTCTTTCAACTTAATTTCATAACTGCCTCAGTTTTATTCTGCTTCCCTGTAGATTAATGAGTCGAAGCTATCTTTTGTAGCAGTTGCAGAAGCAACCCCGCTTGTAAGTGCATTAGCTTCAATTGAAACTGAGTCTGGTGGGCTTTTGGTCGTCGGACCTGAAGGAGGTACATTTTATGATAATCTTGCTTTAAAAGAGGGTTTTAGGGTAGTTTTCAACATTCTGATGATGTGTGTATATGTATATATATATATATATAATCTTTATTTAATAAGTAACCGAGTTTTCATCAAGCAAAATGAAAGAATAAACAAAATGAGTACAACTCCGAAACTTTACCTGAGAGTAAAGGAATGAAATCCTACTGAAAAAAATCTGGTTAACAGACGCCCATAAAGATGCATTTAACCTCACCTCCTCTGACATCTTCTCCACCCCTCTAAAAGTTTTACCATTCCTCTCGAACCACATACCACGAGATTATTATTTTATCACGAAAGAGAGAATTCATCAAGGTTTCATCCATCGTACTCTTTACCAAGAATTTGATCGTCATGGAAAATTACCTATGTTATCTATTGTTAATTGTCCACCTATAAAATAATGTTATAACAGCCCAAGCTCACTGCTAGCAGATATTGTCCGCTTTAGTCCATTACGTATCGTCGTCAGTCTCACAGTTTTAAAACACATCTATTAGGGAGATGTTTCCACACCCCTATGAGGAATACTTTGTTCCCCTCTCCAACCGACGTGTGGGATCTCACAAATGTGTCATTTTAAATATGCTAGTTATATAAACTAGTACTTATCATTTAGTGCATTGCATTTTTCATCCTTTCTTTCTTTTCTTTTTTTTTTTTCTTAACATCTTTTCTTCTTCTTCTTCGTCTTCTTCAGACTTCACCGAAAAAGAGGTCAACATGATCAAAGAAGCTGGTGCAATTGCAGTTGGTCTTGGCCCATATCGACTTCGTGTTGAAACTGCAACAGTTGCAATCTTATCAACCCTGATGTTATGGTCTGACTCGAAAAGTTCTAATCGTTAATCTCTCTTTCAGGTTAGCCCTTGTCTGTTTGTGTATTGATAAATCAAATTTTCCTGCATATCTATTTTGTTCTGTTTCAAGGATGACAAAGGGAATGGGTGCCTATGAAATAGATTTTGAATGCAGTACATGAATACAAGATGTACCAATATCAAGTTTCAATAGCGTAAGATGCGTTGTAAAAATCTTAAGGAAAAGTCCGAAAGGAAAAGCCCAAAGAGGACAATATCTGTTAGCGGTGGGGTTGAGCTGTTACAAATGATATCAAAGCCAGATACCGTGCGGTGTGCCAACGAGGATGCTGGGCCTCAAAGAGGGTGAATTGTGAAATCCCATCTCAGTCGGAGAGGGAAACAAAGCATTTTTTATAAGGGTGTGGAAATCTCTTCTTAGTAGACGTGTTATAAAATCTTGAGGGGAATCCTAAATGGGAAAGTCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCTAGACACAGAGTAGTGTGCCAACGAGGACACTGGCCCACAAGGAGGGTGGATTGTGAGATTCCACATCGGTCAGAGAGAGAAACAAAATATTCCTTATAAGAGTGTGAAAACATCTTCCTAATAGACGCGTTATAAAACTTTGAGGGCAAGGCCGAAAGGGAAAGCCATAGTGAACAATATCTCCTAGCGGTGGGTATGGATTGTTACGCCTAGAAATTTACCTTTCTTCCTATTGAATGGACAAAATTACATTGTGTCATCATATCGAGATCTCAAAAGCGACTAACATCAGTTTATTGCTTCATCTCTTATCGACCTAGTAGATGCTACTCATTTTTTCTAAAACTGGTTGGCCATATCAGACCTACCCATGAAAGTTAACCCATCCCAAACTCACCAACGTGACTTACAGTAAAAAACCAGGACATTTCCCATTAGTTTTCACTTGTTTTAATTCTATTTACTGATTTACTGCAATGCTCCATGGTGAAATATAGTCTTAGAAGAACAATACTAACAATGTAAGGTAGTTTCTAGCATTGGTTATTTAGGTTTATAAGGTTGAAGGATTGTTGTTCATACATAGTTATTGTCTTGCGTTTGCTAGATAGATCATCTAAACGATTCACCCAAGCTTGGGAGTTTCTATTAGAACAATGGAATCCATTCTAGTAGCTTCAGCCTTTCTATGCTTCACTGTGTACAGGATATCATCAAGATCAGCACCATTTCTAAGCCTTAAAGTCGAGCGTTTGAGGCATGGAGCATGTCGACAATTTGAGACATTCTACAAAACAACTTGA

mRNA sequence

TCCTCGCATACTTTCACTATAAGGTCCCTTCCCTACTTCCAGCGAGAGCTGAGAATTCCATGCTTGTTCAGGGTTGGAAGCTTGAAAGCGTCACACCAGCGGCAATCCTCATGTTCCATAGTTGTTCTTCTTTGCAGATGCGAACTATAGGAGCAATACGACCTCAATTGACGGAGTTATTCGACCGTTCGTGTTTCAGAAGCTTCAGAGTTAGAGCTCTCTCGTCTTCATCTCTGGCTTCCTCGAATCAATCCCGCGGTGGTCTTCCTCGCTTCTTCTCCCAAGTTCTTCCTTCTTATAAGGGTGATATTATTCGTCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTTTTGAGGTTGAAGACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAACGGAATCGACATTCTGGCAATGGAAGATCCAAAATCTGTTCTACCTCAAAGCACACAGTGGCATGTATTTGCAGCTTGTGGTACTCTAAAGGGCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACAGAACTGGGTGCCAGTAGCGTAACTCCACTGCTAACAGAACGTTGCGCTACCATATCTGATAACCGGGTGCACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTGCACCAAATGAGTCTGAATTCTCCATTGAAGATTGATGGTCTTTTGCACATTATTAATGAGTCGAAGCTATCTTTTGTAGCAGTTGCAGAAGCAACCCCGCTTGTAAGTGCATTAGCTTCAATTGAAACTGAGTCTGGTGGGCTTTTGGTCGTCGGACCTGAAGGAGACTTCACCGAAAAAGAGGTCAACATGATCAAAGAAGCTGGTGCAATTGCAGTTGTTCTAATCGTTAATCTCTCTTTCAGGATATCATCAAGATCAGCACCATTTCTAAGCCTTAAAGTCGAGCGTTTGAGGCATGGAGCATGTCGACAATTTGAGACATTCTACAAAACAACTTGA

Coding sequence (CDS)

ATGCTTGTTCAGGGTTGGAAGCTTGAAAGCGTCACACCAGCGGCAATCCTCATGTTCCATAGTTGTTCTTCTTTGCAGATGCGAACTATAGGAGCAATACGACCTCAATTGACGGAGTTATTCGACCGTTCGTGTTTCAGAAGCTTCAGAGTTAGAGCTCTCTCGTCTTCATCTCTGGCTTCCTCGAATCAATCCCGCGGTGGTCTTCCTCGCTTCTTCTCCCAAGTTCTTCCTTCTTATAAGGGTGATATTATTCGTCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTTTTGAGGTTGAAGACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAACGGAATCGACATTCTGGCAATGGAAGATCCAAAATCTGTTCTACCTCAAAGCACACAGTGGCATGTATTTGCAGCTTGTGGTACTCTAAAGGGCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACAGAACTGGGTGCCAGTAGCGTAACTCCACTGCTAACAGAACGTTGCGCTACCATATCTGATAACCGGGTGCACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTGCACCAAATGAGTCTGAATTCTCCATTGAAGATTGATGGTCTTTTGCACATTATTAATGAGTCGAAGCTATCTTTTGTAGCAGTTGCAGAAGCAACCCCGCTTGTAAGTGCATTAGCTTCAATTGAAACTGAGTCTGGTGGGCTTTTGGTCGTCGGACCTGAAGGAGACTTCACCGAAAAAGAGGTCAACATGATCAAAGAAGCTGGTGCAATTGCAGTTGTTCTAATCGTTAATCTCTCTTTCAGGATATCATCAAGATCAGCACCATTTCTAAGCCTTAAAGTCGAGCGTTTGAGGCATGGAGCATGTCGACAATTTGAGACATTCTACAAAACAACTTGA

Protein sequence

MLVQGWKLESVTPAAILMFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMIKEAGAIAVVLIVNLSFRISSRSAPFLSLKVERLRHGACRQFETFYKTT

Homology

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BLAST of CmaCh19G005410 vs. Swiss-Prot
Match: RSME_RICCN (Ribosomal RNA small subunit methyltransferase E OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=rsmE PE=3 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-11
Identity = 54/191 (28.27%), Postives = 85/191 (44.50%), Query Frame = 1


Query: 85  IRLEGDEVWHMTK-VLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQ 144
           I L  D   H  K VLRLK +D + LFNG  G     I +I  N + +   E  K    +
Sbjct: 18  IELASDHHVHYVKTVLRLKVNDGLRLFNGTDGEFLAQINDIGKNNLSVRLKEQLKKPYTK 77

Query: 145 STQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAAT 204
           ST   +  A   +K  +    +   T+LG + + PL+T  C   S N + R  +  + AT
Sbjct: 78  ST---LTLAVAIIKQDKLMLAINMATQLGITKIIPLITRWCQFRSVN-IERLTKCVIEAT 137

Query: 205 KQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPE 264
           +Q +RL    +   + I   L   N   L      +    +  ++S  + S   ++VGPE
Sbjct: 138 EQSERLTPPIIEKAITIQDYLKKNNNLMLYANEHEKEENSILRISSSLSNSDITIIVGPE 197

Query: 265 GDFTEKEVNMI 275
           G FT  E+ ++
Sbjct: 198 GGFTNDELELL 204

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BLAST of CmaCh19G005410 vs. Swiss-Prot
Match: RSME_SYNY3 (Ribosomal RNA small subunit methyltransferase E OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rsmE PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-10
Identity = 50/193 (25.91%), Postives = 93/193 (48.19%), Query Frame = 1


Query: 85  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQS 144
           + L   ++ ++ +VLRL+  D   + +G GG+    + ++      +L     ++ LP  
Sbjct: 80  VTLTTAQLHYLQRVLRLQKGDGFMVLDGGGGVWRAQLNDLAHGTAQLLETVSEQNELPLP 139

Query: 145 TQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER-CATISDNRVHRFERITLAAT 204
               V  A    KG   + ++  CTELGA++  PLLTER     S N++ R++RI   A 
Sbjct: 140 ----VTLAIALPKGSGFEEIIRPCTELGATAFQPLLTERTLLKPSQNKLERWQRIVTEAA 199

Query: 205 KQCQRLHQMSLNSPLKIDGLLH-IINESKLSFVAVAEA-TPLVSA-LASIETESGGLLVV 264
           +Q +R     + +PL     +  +     L+ + V    +P++ A L      +  +L  
Sbjct: 200 EQSERQWLPPVAAPLTFGQFVEKVAGPETLALLCVTRLNSPMLGAYLKQSNLPAQIVLAT 259

Query: 265 GPEGDFTEKEVNM 274
           GPEG +T+ E+++
Sbjct: 260 GPEGGWTDNEISL 268

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BLAST of CmaCh19G005410 vs. Swiss-Prot
Match: RSME_HAEIN (Ribosomal RNA small subunit methyltransferase E OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rsmE PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.6e-09
Identity = 50/208 (24.04%), Postives = 100/208 (48.08%), Query Frame = 1


Query: 87  LEGDEVWHMTKVLRLKTDDRVELFNGNGGL-----VEGSIKNIRVNGIDILAMEDPKSVL 146
           L  D   H+ +VLR+   +++ELF+G+  +     +E + K+++V   +IL  E    + 
Sbjct: 20  LSEDAANHVARVLRMTEGEQLELFDGSNHIYPAKIIESNKKSVKV---EILGRE----LA 79

Query: 147 PQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC-----ATISDNRVHRFE 206
            + +   +       +G R ++ ++K  ELG + +TPL +ERC     A   D ++ +++
Sbjct: 80  DKESHLKIHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQWQ 139

Query: 207 RITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGG 266
           +I +AA +QC R     +   +K+       N+  L       A   +  L +I    G 
Sbjct: 140 KIAIAACEQCGRNIVPEIRPLMKLQDWC-AENDGALKLNLHPRAHYSIKTLPTIPA-GGV 199

Query: 267 LLVVGPEGDFTEKEVNMIKEAGAIAVVL 285
            L++G EG  + +E+   ++ G   ++L
Sbjct: 200 RLLIGSEGGLSAQEIAQTEQQGFTEILL 218

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BLAST of CmaCh19G005410 vs. Swiss-Prot
Match: RSME_BACSU (Ribosomal RNA small subunit methyltransferase E OS=Bacillus subtilis (strain 168) GN=rsmE PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.2e-09
Identity = 52/207 (25.12%), Postives = 94/207 (45.41%), Query Frame = 1


Query: 87  LEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAME--DPKSVLPQS 146
           + G+EV H+  V+R+   D++   + +G   +  ++++  + +  L +E  +    LP  
Sbjct: 21  ITGEEVHHIVNVMRMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIK 80

Query: 147 TQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRV-----HRFERIT 206
               V+ A G  KG + +W+++K TELGA +  P    R     D++       R+ +I 
Sbjct: 81  ----VYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIA 140

Query: 207 LAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPL--VSALASIETE---- 266
             A +Q  R     +        LL  + +     VA  E++    +SA ++I +     
Sbjct: 141 KEAAEQSYRNEVPRVMDVHSFQQLLQRMQDFDKCVVAYEESSKQGEISAFSAIVSSLPKG 200

Query: 267 SGGLLVVGPEGDFTEKEVNMIKEAGAI 281
           S  L+V GPEG  TE EV  + E   +
Sbjct: 201 SSLLIVFGPEGGLTEAEVERLTEQDGV 223

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BLAST of CmaCh19G005410 vs. Swiss-Prot
Match: RSME_ECOL6 (Ribosomal RNA small subunit methyltransferase E OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rsmE PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-08
Identity = 45/194 (23.20%), Postives = 92/194 (47.42%), Query Frame = 1


Query: 85  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQS 144
           I L  D   H+ +VLR+     ++LF+G+  + +  I +     +++  +E    +  + 
Sbjct: 18  IALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEG--QIDDRE 77

Query: 145 TQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDN-----RVHRFERIT 204
           +  H+       +G + ++ ++K  ELG S +TPL +ERC    D+     ++ ++++I 
Sbjct: 78  SPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDSERLNKKLQQWQKIA 137

Query: 205 LAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLV 264
           +AA +QC R     +   + ++      +E  L       A+  ++ L  +  E   LL 
Sbjct: 138 IAACEQCGRNRVPEIRPAMDLEAWCAEQDEG-LKLNLHPRASNSINTL-PLPVERVRLL- 197

Query: 265 VGPEGDFTEKEVNM 274
           +GPEG  +  E+ M
Sbjct: 198 IGPEGGLSADEIAM 206

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BLAST of CmaCh19G005410 vs. TrEMBL
Match: A0A0A0K4E1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070790 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 4.2e-105
Identity = 190/207 (91.79%), Postives = 198/207 (95.65%), Query Frame = 1


Query: 18  MFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77
           MFHSC S QMRTIGA RPQLT+L + SCFRSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 78  PSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDP 137
           PSYKGD+IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNG++ILAME+P
Sbjct: 61  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEP 120

Query: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRV RFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFER 180

Query: 198 ITLAATKQCQRLHQMSLNSPLKIDGLL 225
           I LAATKQCQRLHQM+LNSPLKIDGLL
Sbjct: 181 IALAATKQCQRLHQMNLNSPLKIDGLL 207

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BLAST of CmaCh19G005410 vs. TrEMBL
Match: V4SG52_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030269mg PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 9.7e-94
Identity = 174/253 (68.77%), Postives = 207/253 (81.82%), Query Frame = 1


Query: 32  AIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDIIRLEGDE 91
           A+RP+  +  +R   +   +RA SSSS   +NQSRGG+PRFFSQVLPS KG I+R+EGDE
Sbjct: 144 AVRPRFVQFLNRPSLKPLSLRAFSSSSSDYANQSRGGIPRFFSQVLPSSKGGIVRVEGDE 203

Query: 92  VWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQSTQWHVFA 151
            WHMTKVLRL T+DRVELFNG GGL+EG I+ I   G+D++A+ED K VLPQ TQW+VFA
Sbjct: 204 FWHMTKVLRLSTNDRVELFNGKGGLIEGCIQRIDRTGLDVVALEDLKLVLPQHTQWNVFA 263

Query: 152 ACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQ 211
           A GTLKGGRADWLVEKCTELGA SVTPLLTE   +IS+NRV R ER+ LAATKQCQRLH+
Sbjct: 264 AFGTLKGGRADWLVEKCTELGAQSVTPLLTEHSPSISENRVDRLERVILAATKQCQRLHE 323

Query: 212 MSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEV 271
           M LN P+KIDGLL ++++SKL+FVA+AEATPLV+AL+S   ES GL++VGPEGDFTEKEV
Sbjct: 324 MVLNPPMKIDGLLPLVSQSKLAFVAIAEATPLVTALSSSRNESSGLIIVGPEGDFTEKEV 383

Query: 272 NMIKEAGAIAVVL 285
           N I EAGA AV L
Sbjct: 384 NKIVEAGATAVGL 396

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BLAST of CmaCh19G005410 vs. TrEMBL
Match: A0A061E1J5_THECC (Methyltransferases isoform 1 OS=Theobroma cacao GN=TCM_007256 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.7e-93
Identity = 178/260 (68.46%), Postives = 212/260 (81.54%), Query Frame = 1


Query: 27  MRTIGAIRPQLTELFDRSCF-RSFRVRALSSSSLAS-SNQSRGGLPRFFSQVLPSYKGDI 86
           M+T+G +RP+ TEL  R    + F +RA SS+  A+ +NQSRGGL RFFS+ LPS KG +
Sbjct: 1   MQTLGTLRPRFTELLKRPWLTKPFNLRAFSSTPPAAYTNQSRGGLRRFFSETLPSSKGGV 60

Query: 87  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQS 146
           IR++GDE WHMTKVLRLKTDDR+ELFNG GGLVEG I+NI    ID +A+E+PK VLPQS
Sbjct: 61  IRVQGDEFWHMTKVLRLKTDDRIELFNGKGGLVEGCIQNIDRTAIDFVALEEPKLVLPQS 120

Query: 147 TQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATK 206
            QWHVFAA G+LKGGRADWLVEKCTELGA+SVTPLLTER + I+DNRV R +R+ LAATK
Sbjct: 121 -QWHVFAAFGSLKGGRADWLVEKCTELGATSVTPLLTERSSVIADNRVERLQRVILAATK 180

Query: 207 QCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEG 266
           QCQRLH+M LN P KID L+ ++ +SKLSF+A+AEATPLV AL S  TES GL++VGPEG
Sbjct: 181 QCQRLHEMKLNHPTKIDNLVPLVAKSKLSFIAIAEATPLVGALTSTRTESSGLIIVGPEG 240

Query: 267 DFTEKEVNMIKEAGAIAVVL 285
           DFTEKEVNMI EAG+ AV L
Sbjct: 241 DFTEKEVNMIIEAGSTAVGL 259

[Close]

BLAST of CmaCh19G005410 vs. TrEMBL
Match: M5W4K3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009413mg PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.4e-92
Identity = 175/264 (66.29%), Postives = 216/264 (81.82%), Query Frame = 1


Query: 27  MRTIGAIRPQLTELFDRS----CFRSFRVRALSSSSLAS--SNQSRGGLPRFFSQVLPSY 86
           M+T+  IRP+   L+  +      R+   RA SSSS +S  SNQSRGGLPRFFS++LP+ 
Sbjct: 1   MQTLTPIRPRFARLWSLNPSSLSIRTLSPRAFSSSSSSSDYSNQSRGGLPRFFSELLPTS 60

Query: 87  KGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSV 146
           KG I+R++GDE WHMTKVLRL+T+DRVELFNG GGL++G I+++  +G+D +A+EDPKSV
Sbjct: 61  KGGIVRVQGDEFWHMTKVLRLRTNDRVELFNGKGGLIQGLIQSVDRSGLDFVALEDPKSV 120

Query: 147 LPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL 206
           LPQSTQWHVFAA GTLKGGRADWLVEKCTELGASS+TPLLTER  T+S+NR+ R +R+ +
Sbjct: 121 LPQSTQWHVFAAFGTLKGGRADWLVEKCTELGASSLTPLLTERSPTVSENRLDRLQRVNV 180

Query: 207 AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVV 266
           AA KQCQRLH+M LN P KI+GLL ++ ESKL+F+AVAE TPLVSAL    TESGGL+VV
Sbjct: 181 AAAKQCQRLHEMILNPPKKINGLLPLVAESKLAFLAVAEGTPLVSALTLSGTESGGLIVV 240

Query: 267 GPEGDFTEKEVNMIKEAGAIAVVL 285
           GPEGDFTEKEVN + +AGAI+V L
Sbjct: 241 GPEGDFTEKEVNELMQAGAISVGL 264

[Close]

BLAST of CmaCh19G005410 vs. TrEMBL
Match: A0A0D2PMD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G019500 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.4e-92
Identity = 176/260 (67.69%), Postives = 210/260 (80.77%), Query Frame = 1


Query: 27  MRTIGAIRPQLTELFDRSCF-RSFRVRALSSSSLAS-SNQSRGGLPRFFSQVLPSYKGDI 86
           M+++G +RP+ T L  R    + F  RALSS   +  SNQSRGGLPRFFS+ LPS KG +
Sbjct: 1   MQSLGPLRPRSTVLVKRPWLTKPFNWRALSSIPPSDYSNQSRGGLPRFFSETLPSSKGGV 60

Query: 87  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQS 146
           IR++GDE WHMTKVLRLKTDDRVELFNG GGLVEG I+NI  + ID +A+EDPK VLPQ+
Sbjct: 61  IRVQGDEFWHMTKVLRLKTDDRVELFNGKGGLVEGFIQNIDRSSIDFVALEDPKLVLPQT 120

Query: 147 TQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATK 206
            QWH+FAA G+LKGGRADWLVEKCTELGASSVTPLLT+R +TISDNRV R +R+ LAA K
Sbjct: 121 PQWHIFAAFGSLKGGRADWLVEKCTELGASSVTPLLTQRSSTISDNRVERLQRVILAAAK 180

Query: 207 QCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEG 266
           QCQRLH+M LN P+KID L+ ++ +SK SF+A+AE TPLVSAL S   ES GL++VGPEG
Sbjct: 181 QCQRLHEMKLNHPMKIDNLIPLVAKSKQSFIAIAEGTPLVSALTSTTKESSGLIIVGPEG 240

Query: 267 DFTEKEVNMIKEAGAIAVVL 285
           DFTEKEV++I EAGA AV L
Sbjct: 241 DFTEKEVDLITEAGATAVGL 260

[Close]

BLAST of CmaCh19G005410 vs. TAIR10
Match: AT1G50000.1 (AT1G50000.1 methyltransferases)

HSP 1 Score: 302.0 bits (772), Expect = 4.4e-82
Identity = 157/242 (64.88%), Postives = 181/242 (74.79%), Query Frame = 1


Query: 44  SCFRSFR-VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDIIRLEGDEVWHMTKVLRLK 103
           S F+SF  V +   S L   NQSRGGLPRFFS  LPS KG ++R++G E WHM KVLRLK
Sbjct: 27  SSFKSFATVSSSPPSDLNLRNQSRGGLPRFFSDDLPSRKGGVVRVQGSEFWHMAKVLRLK 86

Query: 104 TDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQSTQWHVFAACGTLKGGRAD 163
            +DRVELFNG GGLVEG I++I   G+D +A ED K +LPQ  QW VFAA GTLKGGRAD
Sbjct: 87  QEDRVELFNGKGGLVEGCIQSIDKTGVDFIAQEDQKVILPQGMQWQVFAAFGTLKGGRAD 146

Query: 164 WLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDG 223
           WL+EKCTELGASSVTPLLTER   IS+NRV R ER++ AA KQCQRLHQM LN P+K   
Sbjct: 147 WLIEKCTELGASSVTPLLTERSPIISENRVDRLERVSFAAAKQCQRLHQMVLNPPIKFGT 206

Query: 224 LLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMIKEAGAIAV 283
           LL  I +SKL  VA AEA PL++A+ S   ES GLL+VGPEGDFT+KEV M+ EAG  AV
Sbjct: 207 LLDHILKSKLCLVATAEAKPLLNAVNSSAKESSGLLIVGPEGDFTKKEVEMMLEAGGTAV 266

Query: 284 VL 285
            L
Sbjct: 267 GL 268

[Close]

BLAST of CmaCh19G005410 vs. NCBI nr
Match: gi|778724803|ref|XP_004136932.2| (PREDICTED: uncharacterized protein LOC101213733 [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 2.6e-132
Identity = 241/267 (90.26%), Postives = 253/267 (94.76%), Query Frame = 1


Query: 18  MFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77
           MFHSC S QMRTIGA RPQLT+L + SCFRSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 78  PSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDP 137
           PSYKGD+IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNG++ILAME+P
Sbjct: 61  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEP 120

Query: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRV RFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFER 180

Query: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257
           I LAATKQCQRLHQM+LNSPLKIDGLL  INE+KLSFVAVAEATPLVSALAS + ESGGL
Sbjct: 181 IALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 258 LVVGPEGDFTEKEVNMIKEAGAIAVVL 285
           LV+GPEGDFTEKEVNM+KEAGAIAV L
Sbjct: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGL 267

[Close]

BLAST of CmaCh19G005410 vs. NCBI nr
Match: gi|659110109|ref|XP_008455052.1| (PREDICTED: uncharacterized protein LOC103495322 [Cucumis melo])

HSP 1 Score: 471.9 bits (1213), Expect = 9.2e-130
Identity = 237/267 (88.76%), Postives = 252/267 (94.38%), Query Frame = 1


Query: 18  MFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77
           MFHSC   QMRTIGA RPQLT+L   S  RSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 78  PSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDP 137
           PS+KGD+IRLEGDEVWHMTKVLRLKT+DRVELFNGNGGLVEGSIKN+RVNG+DILAME+P
Sbjct: 61  PSHKGDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNVRVNGLDILAMEEP 120

Query: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180

Query: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257
           ITLAATKQCQRLHQM+LNSPLKIDGLL +INE+KLSFVAVAEATPLVSALAS + ESGGL
Sbjct: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 258 LVVGPEGDFTEKEVNMIKEAGAIAVVL 285
           LV+GPEGDFTEKEV+M+KEAGAIAV L
Sbjct: 241 LVIGPEGDFTEKEVSMMKEAGAIAVGL 267

[Close]

BLAST of CmaCh19G005410 vs. NCBI nr
Match: gi|700188606|gb|KGN43839.1| (hypothetical protein Csa_7G070790 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 6.0e-105
Identity = 190/207 (91.79%), Postives = 198/207 (95.65%), Query Frame = 1


Query: 18  MFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77
           MFHSC S QMRTIGA RPQLT+L + SCFRSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 78  PSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDP 137
           PSYKGD+IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNG++ILAME+P
Sbjct: 61  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEP 120

Query: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRV RFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFER 180

Query: 198 ITLAATKQCQRLHQMSLNSPLKIDGLL 225
           I LAATKQCQRLHQM+LNSPLKIDGLL
Sbjct: 181 IALAATKQCQRLHQMNLNSPLKIDGLL 207

[Close]

BLAST of CmaCh19G005410 vs. NCBI nr
Match: gi|568867118|ref|XP_006486891.1| (PREDICTED: ribosomal RNA small subunit methyltransferase E [Citrus sinensis])

HSP 1 Score: 357.8 bits (917), Expect = 1.9e-95
Identity = 177/253 (69.96%), Postives = 209/253 (82.61%), Query Frame = 1


Query: 32  AIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDIIRLEGDE 91
           A+RP+  +L +R   +   +RA SSSS   +NQSRGGLPRFFSQVLP  KG I+R+EGDE
Sbjct: 7   AVRPRFVQLLNRPSLKPLSLRAFSSSSSDYANQSRGGLPRFFSQVLPPSKGGIVRVEGDE 66

Query: 92  VWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQSTQWHVFA 151
            WHMTKVLRL T+DRVELFNG GGL+EG I+ I   G+D++A+EDPK VLPQ TQW+VFA
Sbjct: 67  FWHMTKVLRLSTNDRVELFNGKGGLIEGCIQRIDRTGLDVVALEDPKLVLPQHTQWNVFA 126

Query: 152 ACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQ 211
           A GTLKGGRADWLVEKCTELGA SVTPLLTER  +IS+NRV R ER+ LAATKQCQRLH+
Sbjct: 127 AFGTLKGGRADWLVEKCTELGAQSVTPLLTERSPSISENRVDRLERVILAATKQCQRLHE 186

Query: 212 MSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEV 271
           M LN P+KIDGLL ++++SKL+FVA+AEATPLV+AL+S   ES GL++VGPEGDFTEKEV
Sbjct: 187 MVLNPPMKIDGLLPLVSQSKLAFVAIAEATPLVTALSSSRNESSGLIIVGPEGDFTEKEV 246

Query: 272 NMIKEAGAIAVVL 285
           N I EAGA AV L
Sbjct: 247 NKIVEAGATAVGL 259

[Close]

BLAST of CmaCh19G005410 vs. NCBI nr
Match: gi|567860214|ref|XP_006422761.1| (hypothetical protein CICLE_v10030269mg [Citrus clementina])

HSP 1 Score: 351.7 bits (901), Expect = 1.4e-93
Identity = 174/253 (68.77%), Postives = 207/253 (81.82%), Query Frame = 1


Query: 32  AIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDIIRLEGDE 91
           A+RP+  +  +R   +   +RA SSSS   +NQSRGG+PRFFSQVLPS KG I+R+EGDE
Sbjct: 144 AVRPRFVQFLNRPSLKPLSLRAFSSSSSDYANQSRGGIPRFFSQVLPSSKGGIVRVEGDE 203

Query: 92  VWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDPKSVLPQSTQWHVFA 151
            WHMTKVLRL T+DRVELFNG GGL+EG I+ I   G+D++A+ED K VLPQ TQW+VFA
Sbjct: 204 FWHMTKVLRLSTNDRVELFNGKGGLIEGCIQRIDRTGLDVVALEDLKLVLPQHTQWNVFA 263

Query: 152 ACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQ 211
           A GTLKGGRADWLVEKCTELGA SVTPLLTE   +IS+NRV R ER+ LAATKQCQRLH+
Sbjct: 264 AFGTLKGGRADWLVEKCTELGAQSVTPLLTEHSPSISENRVDRLERVILAATKQCQRLHE 323

Query: 212 MSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEV 271
           M LN P+KIDGLL ++++SKL+FVA+AEATPLV+AL+S   ES GL++VGPEGDFTEKEV
Sbjct: 324 MVLNPPMKIDGLLPLVSQSKLAFVAIAEATPLVTALSSSRNESSGLIIVGPEGDFTEKEV 383

Query: 272 NMIKEAGAIAVVL 285
           N I EAGA AV L
Sbjct: 384 NKIVEAGATAVGL 396

The following BLAST results are available for this feature:

BLAST of CmaCh19G005410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RSME_RICCN	2.3e-11	28.27	Ribosomal RNA small subunit methyltransferase E OS=Rickettsia conorii (strain AT...	[more]
RSME_SYNY3	2.5e-10	25.91	Ribosomal RNA small subunit methyltransferase E OS=Synechocystis sp. (strain PCC...	[more]
RSME_HAEIN	3.6e-09	24.04	Ribosomal RNA small subunit methyltransferase E OS=Haemophilus influenzae (strai...	[more]
RSME_BACSU	6.2e-09	25.12	Ribosomal RNA small subunit methyltransferase E OS=Bacillus subtilis (strain 168...	[more]
RSME_ECOL6	3.1e-08	23.20	Ribosomal RNA small subunit methyltransferase E OS=Escherichia coli O6:H1 (strai...	[more]

BLAST of CmaCh19G005410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4E1_CUCSA	4.2e-105	91.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070790 PE=4 SV=1	[more]
V4SG52_9ROSI	9.7e-94	68.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030269mg PE=4 SV=1	[more]
A0A061E1J5_THECC	3.7e-93	68.46	Methyltransferases isoform 1 OS=Theobroma cacao GN=TCM_007256 PE=4 SV=1	[more]
M5W4K3_PRUPE	2.4e-92	66.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009413mg PE=4 SV=1	[more]
A0A0D2PMD5_GOSRA	2.4e-92	67.69	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G019500 PE=4 SV=1	[more]

BLAST of CmaCh19G005410 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50000.1	4.4e-82	64.88	methyltransferases	[more]

BLAST of CmaCh19G005410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724803\|ref\|XP_004136932.2\|	2.6e-132	90.26	PREDICTED: uncharacterized protein LOC101213733 [Cucumis sativus]	[more]
gi\|659110109\|ref\|XP_008455052.1\|	9.2e-130	88.76	PREDICTED: uncharacterized protein LOC103495322 [Cucumis melo]	[more]
gi\|700188606\|gb\|KGN43839.1\|	6.0e-105	91.79	hypothetical protein Csa_7G070790 [Cucumis sativus]	[more]
gi\|568867118\|ref\|XP_006486891.1\|	1.9e-95	69.96	PREDICTED: ribosomal RNA small subunit methyltransferase E [Citrus sinensis]	[more]
gi\|567860214\|ref\|XP_006422761.1\|	1.4e-93	68.77	hypothetical protein CICLE_v10030269mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006700	rRNA_ssu_MeTrfase-E
IPR015947	PUA-like_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008168	methyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G005410.1	CmaCh19G005410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006700	Ribosomal RNA small subunit methyltransferase E	PFAM	PF04452	Methyltrans_RNA	coord: 86..284 score: 2.0
IPR006700	Ribosomal RNA small subunit methyltransferase E	TIGRFAMs	TIGR00046	TIGR00046	coord: 84..282 score: 2.1
IPR015947	PUA-like domain	unknown	SSF88697	PUA domain-like	coord: 73..127 score: 2.34
None	No IPR available	PANTHER	PTHR30027	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E	coord: 49..284 score: 3.5E
None	No IPR available	PANTHER	PTHR30027:SF4	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE-RELATED	coord: 49..284 score: 3.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G005410	Cucsa.219040	Cucumber (Gy14) v1	cgycmaB0624
CmaCh19G005410	Cla001613	Watermelon (97103) v1	cmawmB503
CmaCh19G005410	Csa7G070790	Cucumber (Chinese Long) v2	cmacuB528
CmaCh19G005410	MELO3C018530	Melon (DHL92) v3.5.1	cmameB463
CmaCh19G005410	ClCG02G007120	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G005410	CSPI07G06740	Wild cucumber (PI 183967)	cmacpiB534
CmaCh19G005410	CmoCh19G005550	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G005410	Lsi03G005980	Bottle gourd (USVL1VR-Ls)	cmalsiB484
CmaCh19G005410	Cp4.1LG15g04260	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G005410	MELO3C018530.2	Melon (DHL92) v3.6.1	cmamedB535
CmaCh19G005410	CsaV3_7G007700	Cucumber (Chinese Long) v3	cmacucB0639
CmaCh19G005410	Cla97C02G033960	Watermelon (97103) v2	cmawmbB531
CmaCh19G005410	Carg16319	Silver-seed gourd	carcmaB0632

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G005410	Watermelon (97103) v2	cmawmbB524
CmaCh19G005410	Wax gourd	cmawgoB0634
CmaCh19G005410	Wax gourd	cmawgoB0642
CmaCh19G005410	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh19G005410	Cucurbita maxima (Rimu)	cmacmaB340
CmaCh19G005410	Cucurbita moschata (Rifu)	cmacmoB494
CmaCh19G005410	Cucurbita moschata (Rifu)	cmacmoB502
CmaCh19G005410	Cucurbita moschata (Rifu)	cmacmoB530
CmaCh19G005410	Cucurbita pepo (Zucchini)	cmacpeB539
CmaCh19G005410	Bottle gourd (USVL1VR-Ls)	cmalsiB483
CmaCh19G005410	Cucumber (Gy14) v2	cgybcmaB945
CmaCh19G005410	Melon (DHL92) v3.6.1	cmamedB562
CmaCh19G005410	Silver-seed gourd	carcmaB0407
CmaCh19G005410	Silver-seed gourd	carcmaB0528
CmaCh19G005410	Silver-seed gourd	carcmaB1026