CmaCh19G004670 (gene) Cucurbita maxima (Rimu)

NameCmaCh19G004670
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr19 : 5607965 .. 5610759 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTAAGCAACAACAATCCATCCTCTGCCGTTTCATCATCTTCAAATCCTCTGACCCTTTACTTTCTTGTGTTCATCCGCCGTGTCGTCTTTGGAGATTCTCACCGGATAGGCCGCCGCCCGCCGTCCGTCATGTCGTCCAACTCTGGTCATTTCTGGAGCTTCACAATCCTCAGATTCCGAAGCTTGCTTCTTCAACTTTCTCATAAGATAAACACCTCCGCCCCCGCCGGTGGGTGCCGTCGTCGTCCGGTATCGGAGCCGCCGCAGAGCTCCTCCGTTGCCGTGGTTCCGTACAGCTTCCGTTCCTTTGGTCTGTCGTCCCTCCTCAGATCTTATTGTCCCAGGTTCGTTACTTCCGTTTAATGTGTGGTTCTGTGGTAAATTAATAAAAATAGTTTAAATAATACTTTTAATAAATGAAAATCCTTCCGAAAATTGATATTCAAAGCTTTATAATATTTTTTAAATACTTTTACAGAAAAATATTTAATATTAATATATTAAACTTTTACAAAATATATATATATATATATATATATATATATATATAATTATATAATTAATATTTATAAAATTTGAAATTATTGAAACTATTATAAATTGGAGTTATTTATTTATTTATTTATTATTTTGGATTGAATGAATTTAGGGCAAAATGGATATTTGGGTCCCTATTGTCTCTCTTTGTACCTAGTTGGAATAAATGGCAAGCTCTTGAAGGTATATATTTCATTTATTTCTTAAATTATTCTTTATAAATAATTTTACACCCTAACATATAATAATCCAAAATTATATTTTTAAGGTTAAATTAATTTTTAAAAATACCATTAAATTTTTATATTTGGTTTAAAAAACCAACTTTTAATTAATTAAAGGTTCTTATGAAACATCCCATTTTAAAAGTTTTAAAAATTTTATATCAAACGCGCTTTTTCGAAGAATCCTGCACCCATGGGCATACGGCCTGGCAGGCCTTCCCTTTCCGCCGGAGCTTCATGGGCGTTGCCCTGTTCCCCAATCAGATGTTTGGATGTGAGCTATACTCCGCGAGGAGCCAAACGGGCGTATGGCCTTGCCATTTGACCTCTCTTCCCGTGTGACTAGGAATGGTATGATATGGTCCACATAAGTGGACATGACTTTGCTTTGGAAGGCCTCATACCAATAAGTTAGTATTCCTCACTTATAAACCCATGATCATTTCCTAAATTAGCCGATGTGGGAATGGAGTTAATATTCCTCACTTATAAACTCAAGATCATTCCAACCCATAATCATTCCTCACTTATAAACTCAAGATCATTCCAACCCATAATCATTCTCTAAATTAACCAATGTGGGAATGGAGCTAGTATTAGCCGATGTGAGAATGGAGTTAATATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCGAACTTTCATCATCCAACAAAATGAATTGTGATAGCTACGAAATGCCCTGCATACTATAAATTGATGTGTTATTGATCCTGAATGGTTAGACGAAGCGGAAAAAGGGATCGAAGAGGCGGAGCATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGCAGAAATTGGGGAGAAGCTTCCTGAGAAGAGTAGGATGAAAGATGCAGCTGAAGCTGTAGAGAAGTATTCCAAGGAAATTGCCCACGATGCTCTCCTTGCACAACACATCCTTCACAAGGTTTCATATTTATTAATTACCAGCTATGATATGATATTAAAAACTTCGATATTGTCCACTCTAATCATAAGCTCTTCGGAGGCCTCATATATCAATGAAGAGACCTCGTACCAATGACCTTGGGTAATGGAGAAACCGAATACTAATTGTCCCAAAAGGCTTTCAAGCCTCATACCAATGAAGAGAGTACCTCTCATGGCTTTTTCAGACCTCATACCAATGGAGAGAGTACCTCTCATGGCTTCTTCCGGCCTCATACCAATGGAGAGAGAACCTCTCATGGCTTCTTCAGGCCTCATACCCATGGAGAGAGTACCTCTCATGGCTTCTTGCGGCCTCATACCCATGGAGAGAGTACCTCTCATGGCTTCTTGCGGCCTCATACCCATGGAGAGAGTACCTCTCATGGCTTCTTCCAGCCTCATACCAATGGAGAGAGTACCTCTCATGACTTCTTCAAACCTCATCCCAATGGAGAGAGTACCTATCCCAATGGGAAGAGTACCTCTCATGGCTTCTTCGATAGTATTCTTTAATAGACTCATGATCATTCCTTATATTGGCTACTTCCAGCCTAAGTTCTCATGACTATGTTTGAGTTTTCTCAAAATTGTTCTCAGGACTGATTTGGGTTTTCTCAAAACACCCTCGTACCAACGAGAGTATTCCTAGATTATAAACTCATAATCATTCCTTAAATCGGTCGAGGCGTGACTTTCATCCAACATCTCCTCATGTTGGATGATGAGTCCCACGTCGGTTAATTTAGGAGGGAATAATCATGGAGGCTTTGTGGGAAAGCCCAAAAACAAAACCATGAAAGCTTAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAAAGTTGTCTCGTCCACTGGTATGATAAACTCACAATAACAGCTAAAAAATCACACCGTATCAAATAATCGTTTAAAAAAAAACTAAAAAATTATTATTAAATATTATTAATTTCTTTCAATATTTGATTGTAGGTGGAAGAATGGAAGCAAAAGCTAGACAAATCAGAGGCAGATATTAATGAACAGATGAAAAAGATAGTAAATAAGTGA

mRNA sequence

CTTCTAAGCAACAACAATCCATCCTCTGCCGTTTCATCATCTTCAAATCCTCTGACCCTTTACTTTCTTGTGTTCATCCGCCGTGTCGTCTTTGGAGATTCTCACCGGATAGGCCGCCGCCCGCCGTCCGTCATGTCGTCCAACTCTGGTCATTTCTGGAGCTTCACAATCCTCAGATTCCGAAGCTTGCTTCTTCAACTTTCTCATAAGATAAACACCTCCGCCCCCGCCGGTGGGTGCCGTCGTCGTCCGGTATCGGAGCCGCCGCAGAGCTCCTCCGTTGCCGTGGTTCCGTACAGCTTCCGTTCCTTTGACGAAGCGGAAAAAGGGATCGAAGAGGCGGAGCATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGCAGAAATTGGGGAGAAGCTTCCTGAGAAGAGTAGGATGAAAGATGCAGCTGAAGCTGTAGAGAAGTATTCCAAGGAAATTGCCCACGATGCTCTCCTTGCACAACACATCCTTCACAAGGTGGAAGAATGGAAGCAAAAGCTAGACAAATCAGAGGCAGATATTAATGAACAGATGAAAAAGATAGTAAATAAGTGA

Coding sequence (CDS)

CTTCTAAGCAACAACAATCCATCCTCTGCCGTTTCATCATCTTCAAATCCTCTGACCCTTTACTTTCTTGTGTTCATCCGCCGTGTCGTCTTTGGAGATTCTCACCGGATAGGCCGCCGCCCGCCGTCCGTCATGTCGTCCAACTCTGGTCATTTCTGGAGCTTCACAATCCTCAGATTCCGAAGCTTGCTTCTTCAACTTTCTCATAAGATAAACACCTCCGCCCCCGCCGGTGGGTGCCGTCGTCGTCCGGTATCGGAGCCGCCGCAGAGCTCCTCCGTTGCCGTGGTTCCGTACAGCTTCCGTTCCTTTGACGAAGCGGAAAAAGGGATCGAAGAGGCGGAGCATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGCAGAAATTGGGGAGAAGCTTCCTGAGAAGAGTAGGATGAAAGATGCAGCTGAAGCTGTAGAGAAGTATTCCAAGGAAATTGCCCACGATGCTCTCCTTGCACAACACATCCTTCACAAGGTGGAAGAATGGAAGCAAAAGCTAGACAAATCAGAGGCAGATATTAATGAACAGATGAAAAAGATAGTAAATAAGTGA

Protein sequence

LLSNNNPSSAVSSSSNPLTLYFLVFIRRVVFGDSHRIGRRPPSVMSSNSGHFWSFTILRFRSLLLQLSHKINTSAPAGGCRRRPVSEPPQSSSVAVVPYSFRSFDEAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALLAQHILHKVEEWKQKLDKSEADINEQMKKIVNK
BLAST of CmaCh19G004670 vs. TrEMBL
Match: A0A0A0K622_CUCSA (Alkyl transferase OS=Cucumis sativus GN=Csa_7G064570 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23
Identity = 67/93 (72.04%), Postives = 77/93 (82.80%), Query Frame = 1

Query: 105 DEAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDAL 164
           DEAE  IEEAE+VAEVVEKVAELTEKVS +I EKLPEKS++K+AAE VE YSKEIAHDA 
Sbjct: 385 DEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESYSKEIAHDAH 444

Query: 165 LAQHILHKVEEWKQKLDKSEADINEQMKKIVNK 198
           L Q ILHKVEEWK K+DKS+ D NE  K+ + +
Sbjct: 445 LTQDILHKVEEWKLKVDKSKIDTNEPNKEEIRQ 477

BLAST of CmaCh19G004670 vs. TrEMBL
Match: A0A0R0II79_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G070200 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.3e-12
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1

Query: 106 EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 165
           EAE  +EEAE VA++VEKVA +TEKVS ++ E LPE  +++ AA  VE+ SKE AHDA L
Sbjct: 140 EAEFVVEEAEAVAKMVEKVAMVTEKVSEDVAEMLPEDGKLRKAALVVERASKEAAHDAQL 199

Query: 166 AQHILHKVEEWKQKLDKSEADINEQMKKIV 196
            +  LHKVEE K  LD  EA +   + KIV
Sbjct: 200 TEEFLHKVEELKNDLDDLEAFVEPVIDKIV 229

BLAST of CmaCh19G004670 vs. TrEMBL
Match: A0A0B2SMY3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_034603 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.3e-12
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1

Query: 106 EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 165
           EAE  +EEAE VA++VEKVA +TEKVS ++ E LPE  +++ AA  VE+ SKE AHDA L
Sbjct: 122 EAEFVVEEAEAVAKMVEKVAMVTEKVSEDVAEMLPEDGKLRKAALVVERASKEAAHDAQL 181

Query: 166 AQHILHKVEEWKQKLDKSEADINEQMKKIV 196
            +  LHKVEE K  LD  EA +   + KIV
Sbjct: 182 TEEFLHKVEELKNDLDDLEAFVEPVIDKIV 211

BLAST of CmaCh19G004670 vs. TrEMBL
Match: I1KR05_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G070200 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.3e-12
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1

Query: 106 EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 165
           EAE  +EEAE VA++VEKVA +TEKVS ++ E LPE  +++ AA  VE+ SKE AHDA L
Sbjct: 122 EAEFVVEEAEAVAKMVEKVAMVTEKVSEDVAEMLPEDGKLRKAALVVERASKEAAHDAQL 181

Query: 166 AQHILHKVEEWKQKLDKSEADINEQMKKIV 196
            +  LHKVEE K  LD  EA +   + KIV
Sbjct: 182 TEEFLHKVEELKNDLDDLEAFVEPVIDKIV 211

BLAST of CmaCh19G004670 vs. TrEMBL
Match: C6T1F0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.4e-12
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 1

Query: 106 EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 165
           EAE  +EEAE VA+VVEKVA + EKVS ++ E LPE  +++ AA  VE+ SKE AHDA L
Sbjct: 120 EAEFVVEEAEAVAKVVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQL 179

Query: 166 AQHILHKVEEWKQKLDKSEADINEQMKKIV 196
            +  +HKVEE K  LD  EA +   + KIV
Sbjct: 180 TEEFIHKVEELKNDLDDLEAFVEPVIDKIV 209

BLAST of CmaCh19G004670 vs. TAIR10
Match: AT2G14095.1 (AT2G14095.1 unknown protein)

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 1

Query: 106 EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 165
           EAE  +E  E VAE+VEKVA  T++++ E+ EKLPEK+++K  A  +E  S+  AH+A L
Sbjct: 123 EAELVVEGVEAVAEMVEKVATATDEMAEEMAEKLPEKNKLKQVALVLEHISEVAAHEAHL 182

Query: 166 AQHILHKVEEWKQKLDKSEADINEQM-KKIVN 197
            Q  LHKVE+  Q +D  EA I   + KK+ N
Sbjct: 183 TQDFLHKVEKVTQDIDDLEAMIKPLIDKKVAN 214

BLAST of CmaCh19G004670 vs. NCBI nr
Match: gi|659110320|ref|XP_008455165.1| (PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 2.4e-24
Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 1

Query: 105 DEAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDAL 164
           DEAE  +EE E+VAEVVEKVAELTEKVS EI EKLPEKS++K+AA+ VE YSKEIAHDA 
Sbjct: 118 DEAEMVMEEVENVAEVVEKVAELTEKVSTEISEKLPEKSKLKEAAQVVENYSKEIAHDAH 177

Query: 165 LAQHILHKVEEWKQKLDKSEADINEQMKK 194
           L Q ILHKVEEWKQK+DKS+ D+NE  K+
Sbjct: 178 LTQDILHKVEEWKQKIDKSKIDMNESNKE 206

BLAST of CmaCh19G004670 vs. NCBI nr
Match: gi|778724472|ref|XP_011658811.1| (PREDICTED: uncharacterized protein LOC105436091 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 2.1e-23
Identity = 67/93 (72.04%), Postives = 77/93 (82.80%), Query Frame = 1

Query: 105 DEAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDAL 164
           DEAE  IEEAE+VAEVVEKVAELTEKVS +I EKLPEKS++K+AAE VE YSKEIAHDA 
Sbjct: 121 DEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESYSKEIAHDAH 180

Query: 165 LAQHILHKVEEWKQKLDKSEADINEQMKKIVNK 198
           L Q ILHKVEEWK K+DKS+ D NE  K+ + +
Sbjct: 181 LTQDILHKVEEWKLKVDKSKIDTNEPNKEEIRQ 213

BLAST of CmaCh19G004670 vs. NCBI nr
Match: gi|700188514|gb|KGN43747.1| (hypothetical protein Csa_7G064570 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 2.1e-23
Identity = 67/93 (72.04%), Postives = 77/93 (82.80%), Query Frame = 1

Query: 105 DEAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDAL 164
           DEAE  IEEAE+VAEVVEKVAELTEKVS +I EKLPEKS++K+AAE VE YSKEIAHDA 
Sbjct: 385 DEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESYSKEIAHDAH 444

Query: 165 LAQHILHKVEEWKQKLDKSEADINEQMKKIVNK 198
           L Q ILHKVEEWK K+DKS+ D NE  K+ + +
Sbjct: 445 LTQDILHKVEEWKLKVDKSKIDTNEPNKEEIRQ 477

BLAST of CmaCh19G004670 vs. NCBI nr
Match: gi|955332801|ref|XP_014633807.1| (PREDICTED: uncharacterized protein LOC100305915 isoform X1 [Glycine max])

HSP 1 Score: 79.7 bits (195), Expect = 6.2e-12
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1

Query: 106 EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 165
           EAE  +EEAE VA++VEKVA +TEKVS ++ E LPE  +++ AA  VE+ SKE AHDA L
Sbjct: 140 EAEFVVEEAEAVAKMVEKVAMVTEKVSEDVAEMLPEDGKLRKAALVVERASKEAAHDAQL 199

Query: 166 AQHILHKVEEWKQKLDKSEADINEQMKKIV 196
            +  LHKVEE K  LD  EA +   + KIV
Sbjct: 200 TEEFLHKVEELKNDLDDLEAFVEPVIDKIV 229

BLAST of CmaCh19G004670 vs. NCBI nr
Match: gi|571468869|ref|XP_006584480.1| (PREDICTED: uncharacterized protein LOC100305915 isoform X2 [Glycine max])

HSP 1 Score: 79.7 bits (195), Expect = 6.2e-12
Identity = 49/90 (54.44%), Postives = 62/90 (68.89%), Query Frame = 1

Query: 106 EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 165
           EAE  +EEAE VA++VEKVA +TEKVS ++ E LPE  +++ AA  VE+ SKE AHDA L
Sbjct: 122 EAEFVVEEAEAVAKMVEKVAMVTEKVSEDVAEMLPEDGKLRKAALVVERASKEAAHDAQL 181

Query: 166 AQHILHKVEEWKQKLDKSEADINEQMKKIV 196
            +  LHKVEE K  LD  EA +   + KIV
Sbjct: 182 TEEFLHKVEELKNDLDDLEAFVEPVIDKIV 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K622_CUCSA1.4e-2372.04Alkyl transferase OS=Cucumis sativus GN=Csa_7G064570 PE=3 SV=1[more]
A0A0R0II79_SOYBN4.3e-1254.44Uncharacterized protein OS=Glycine max GN=GLYMA_08G070200 PE=4 SV=1[more]
A0A0B2SMY3_GLYSO4.3e-1254.44Uncharacterized protein OS=Glycine soja GN=glysoja_034603 PE=4 SV=1[more]
I1KR05_SOYBN4.3e-1254.44Uncharacterized protein OS=Glycine max GN=GLYMA_08G070200 PE=4 SV=1[more]
C6T1F0_SOYBN7.4e-1253.33Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT2G14095.14.3e-1146.74 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659110320|ref|XP_008455165.1|2.4e-2474.16PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo][more]
gi|778724472|ref|XP_011658811.1|2.1e-2372.04PREDICTED: uncharacterized protein LOC105436091 [Cucumis sativus][more]
gi|700188514|gb|KGN43747.1|2.1e-2372.04hypothetical protein Csa_7G064570 [Cucumis sativus][more]
gi|955332801|ref|XP_014633807.1|6.2e-1254.44PREDICTED: uncharacterized protein LOC100305915 isoform X1 [Glycine max][more]
gi|571468869|ref|XP_006584480.1|6.2e-1254.44PREDICTED: uncharacterized protein LOC100305915 isoform X2 [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G004670.1CmaCh19G004670.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 166..197
scor
NoneNo IPR availablePANTHERPTHR33735FAMILY NOT NAMEDcoord: 105..197
score: 8.1
NoneNo IPR availablePANTHERPTHR33735:SF4EXPRESSED PROTEINcoord: 105..197
score: 8.1