Lsi03G007310 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G007310
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_4725
Location	chr03 : 9855737 .. 9861096 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCATTATCATTACCATCTTCATAACACACACAAAATTCCTCTACTACTTCAATGTTGAGACTTTAATTTACAAATACATCTGTTGTGTCGTCTTTGGAGATCTTCACCTTTGGAAGCCTCTGTCCGACATGTCGTCTAAATTTGGTCATTTTTGGAGAAGCTGGCTTCTTCAACTTTTTCCCAAGATAGACACCTCCACCCCGGGCAGCGGCTTGATCTGTCGTCGTTGGAAATCTGAGCTACCGCAAGCCTCCTCTGTAGCCATTGTTCCGGTCAGGTTAAGCTTATTTGGTTCTGCAACTTATATGTCATCTCTCTTCAGATCTTATTGTCCCAGGTTAGTTATTTGGAATCAACTTTAATATTGATATACTTTACATTGTTTTTAAGCTTTCAAACATTTTAGGAACCAAAAATGTTTTTTTAACATTTTTTTATTTTTTTATTTTTAAATAATTTATTTTAATAATCTTTGATTGGTTAGATATATATATATATTTTTTTTTTGGAGACTTAAACGGTAGATTTGTCAGAAATAAGAAGAAAAATAAATTTCATAGTTTACAAAATAGCATCTTTTTGCTAGTTGTTTTAATGACTTGTCTTGGTGCATCTCAGGATCGATAACAAAGCCAAAATAAAAACGTAAACATATTTTGATGGCACATTCGATTTTTAGAATAATATATGTTAATAGAAAACTGGCCAATTTTCTTAAACATATTTTGATGGCACACCCAATTTTCTTATAATATATGTTAGCGCTCAATTTTTATTTTGGCGTTCAATAATTTGGACAGAGTTTCACTATGATAGTTATAGTTTAATTAAAGAAAATTTTTACACATAGAAAAAAATGTCAAACTATTTATAGAAAATAGCAAAAAAAATTACGGATACACATTGATAGACTTCTATCAGCATCTATTAGTGTTAAACTTCTATCATTTATATCACTGATAGACTCTGACAGACTTCTATCAGCGTCTATTACAACTATCTAAAAATTTTATATTTTGTATAAATAGTTTCTCTTATTTAAAAATTTTTCTTTAATTAAGAGTTTTATTAAGTTCTAATTTCAATTTGGTCTCGTCGATCGGAAGAGAATTTTAATTTGGTTTCAAGAGTTTCAACTTAATTTTGATTATAATTTAATTAAACTTTCACAAGTCATCTCTAACTTGTGTTTTATCCTATTCCAAAAATTCGGAAAAAAAAATTTAGGAATTAAACTGAAACTAAACTTAAATTATGTAGATCAAATTGATACTTTCTCCTAAATATATGCTAATTTTTTGTTCTCGATTGCTAGGATTAGACATAACCAAGATAAGGATCAGCCATTAACATCAACATTTTTCTTCTTCCCTGGTTGGTAAGTCAAACTTTGAAAACTATTGAAAATGAAAAACCATTGTTTTTTCCCCTCTTCAATTGCACTTACATTTTTATTCTTCTGGATTTAATGAATTTAGGGCCAAATGGATTTTTGGCTCCCTATTGTCCCTCTTGGTACCCAGTTGGAATAAATTGCAAACTCTTGAAGGTATATTCCATTTATTTCTTTAAAATTAATATTATTTTCCTTTTCTAATTTCATTCTAAAGAATATATTAACATATGTGCATTTGATAACTATTTTCTATTTTGTTTTCAATTTTTAAAAATTAAGCTTACTTCTTCACATTTTTTAATTATAATAGTATGCATCTTTTTTAAGTTCAAGAGTTGAATTCTTAGCTAAACTTCAAAAGCAAAAACAAGTTTTTAAAAATTACTTTTTTCAGTTTTTAAAATTTTGCTTGGTTTTTGAAAACATTGATGAAAAGTAGATAAGAGAAAGTAAGACATTTAGGAGTGAGAGAAGTGCGTTTGTAGGCTTAATTTTCAAAAACTAAAAACAAAAAACCAAATATTTATCAAACGGAGTCATAACGATTTTGTTTTAAATTTCTTGTTTTTAAAATTTATATTTGTTTTCCTCCAATGTTTCAATTATGGGTTTTATCACTTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTCAACTTCTAATCCATTTCTAAAAACAAAAATGAGTTTTTCAAAACTTTTTTTTTAGTTTCTAAAACATAGTTTAGTTTTTTTAATAGAAAATGAATAAGAAAACATAACTTATATAGATAGATAGGAGTAACGTTTATATGAAACTTAATTTTGAAAAACTAAAAAATAAAAAACTATCCTATGCCAAATTTCTTAAATCAATAGCCATCCTTTTTATATATATATATATATATATAAAAGGAAAATATATTTATTAACTATATAGTCAAAATTTTAAAAGAAAATCTGGTTTAAAAATGATGAGTTTAATAGAAAACTGAACTACAAAATTATAAAAGTATATTTTTAGAATTAATATTTTCATCGACATCGAACACTAAATTGATATCTGATTGAAATTGAATGTTTAGATGAAGCTGAAACGATGATCGAAGAGGCTGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGCAGAAATTGGTGACAAACTACCTGAAAAGAGTAAGCTTAAAGAGGCAGCTCATATTGTAGAAAACTATTCTAAGGAAATTGCTCATGATGCTCACCTAACCCAAGATATCCTCCATAAGGTTTACATCTATACAATTTTATTTTTTCCTATATCATTTACAAACGTGTCGCTAATTCGTTTCGACGACTAGGTTTCACTGACTATTGGTGCATAAAGTTGTTTTTTTTTTTCACGTCATTGAAGGGTTTTTTAGACTAAATAGAAGATTTAGAAATGTTGTTATTTGTTGTAGCGTATGATTATTAATATCTTAGGATGTGTTTGTTTTAACTTTTCGAGTGTTTAATTTAAAAAATAAGTCATTTTAGAAAAAATTAAATTGTTTGGTAACTATTCAAAATAGCTTTTGAAATACTTTTAAAGTTCATTTTAAACAATTTTTATCAAAAGTGTTTAAATAAAAATGAGTGTTTTAAAAAACATTTTTTTTTCTAGTCAATCCAAACGGGCCTAAGATATTAAACACTTGAAATAGGCCCTTAATCATTTGGGATTCGATTGGTAACCATTTGGTTTTTAGTTTTTAGTTTTTTAAAATTAAGCCCATAGACTCCTCTTTCCACCTCTAAAATTCTTGCTTTGTTATTTCTTTCTACCAATATTTTTAAAAATCAAGTCAAATTTTGAAAACTTAAAAAAGTAATTTTTAAAAATTTGTTTTTATTTTTGGAATTTGCTAAGAATTCAACTTGTGTACTTAAGAAAGATGCAAACAATTGTAAGAAAATAAAAGAAAATAGATTTAATTTTCAAAATAATAAAAAAAGTAAAATCGAAATAGTTATCAAACCAGACCTTAATTATTCTTGAGTTGTTTTTATCACGAAGTTTCAAACAACATACTTTTATGGGCCCTATGGGCCCCGGTGTTTTTATCAATCTTAATCATATTTATTATTAAGTATATAGGGAGTCATTCTTGTGTGGCCTCCATTTAACTTTTAATATATTAATTTAGAAATATATAATATATCAAATTTAAATATGGGAAATTTTTAAAAATAGAAAAATAAGGGAAATTATTTACACAAAATAGCAAAACTTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTATCACGGATAGATACTGATAGAAGTCTATCAATATCTATCAGTATTTTTTTGCTATTTTATGTAAATAGTTTGACATTTTTTCTATCTGTGAAAATTTTCCTTTAAATATATATTATTTTAAAATTTTTTATTTAATCTTTTAAAATTTTTGAGTTATTGCAATGGATAGTACTTTTAAAGCTATTAATTAAGTATATAGCATCATTTTAAAAAAAATTCAAATATAACAAAATCTACTAGTGATAGACTCATATCAACGATATAGTTTATCATTGATAAACTTCAAGAGTTGGATCTAAATTTTGCTATATTTACAAATTTTTTTGCATTGTATTATATCTATTAATATTTTGGACTTGATTATTATATTTGTAGCTGCATTTTAGTTTTTAGACTTATTTTATTCTTCTCTCGAAATTCAAGTATTTATTTTAGTTTAGATTATGTTAATTTTATTCTTTTTTAGTTCTAACTTCTAACATGGGGAGGTAAAATTCAAACTTCAAACTTCTTTTCAGAAAAAAAAATTATTATTATCATTTCTACTTTCAATATTTTGATGTGCGTGACTTTAATAATATATATATATATATAATTCCACAACTATTTTCCTTTTTCTTTTTCTCTTTTCGTTGTAGGTGGAAGAGTGGAAGCAAAAGCTAGATAAGTCGGAGACAACTGTGAATGAACAGATTAAGAAGAAATAAAGGCAAATTAAAGGAAACAAGTGAAAATGTATTAAATTATAAGGATCAATATATATAGCATATAAAAATTGTAAAACTTAAGAGAAAGAAATTTGATTTATTCTATCATGTC

mRNA sequence

CATTCATTATCATTACCATCTTCATAACACACACAAAATTCCTCTACTACTTCAATGTTGAGACTTTAATTTACAAATACATCTGTTGTGTCGTCTTTGGAGATCTTCACCTTTGGAAGCCTCTGTCCGACATGTCGTCTAAATTTGGTCATTTTTGGAGAAGCTGGCTTCTTCAACTTTTTCCCAAGATAGACACCTCCACCCCGGGCAGCGGCTTGATCTGTCGTCGTTGGAAATCTGAGCTACCGCAAGCCTCCTCTGTAGCCATTGTTCCGGTCAGGTTAAGCTTATTTGGTTCTGCAACTTATATGTCATCTCTCTTCAGATCTTATTGTCCCAGGATTAGACATAACCAAGATAAGGATCAGCCATTAACATCAACATTTTTCTTCTTCCCTGGTTGGGCCAAATGGATTTTTGGCTCCCTATTGTCCCTCTTGGTACCCAGTTGGAATAAATTGCAAACTCTTGAAGATGAAGCTGAAACGATGATCGAAGAGGCTGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGCAGAAATTGGTGACAAACTACCTGAAAAGAGTAAGCTTAAAGAGGCAGCTCATATTGTAGAAAACTATTCTAAGGAAATTGCTCATGATGCTCACCTAACCCAAGATATCCTCCATAAGGTGGAAGAGTGGAAGCAAAAGCTAGATAAGTCGGAGACAACTGTGAATGAACAGATTAAGAAGAAATAAAGGCAAATTAAAGGAAACAAGTGAAAATGTATTAAATTATAAGGATCAATATATATAGCATATAAAAATTGTAAAACTTAAGAGAAAGAAATTTGATTTATTCTATCATGTC

Coding sequence (CDS)

ATGTCGTCTAAATTTGGTCATTTTTGGAGAAGCTGGCTTCTTCAACTTTTTCCCAAGATAGACACCTCCACCCCGGGCAGCGGCTTGATCTGTCGTCGTTGGAAATCTGAGCTACCGCAAGCCTCCTCTGTAGCCATTGTTCCGGTCAGGTTAAGCTTATTTGGTTCTGCAACTTATATGTCATCTCTCTTCAGATCTTATTGTCCCAGGATTAGACATAACCAAGATAAGGATCAGCCATTAACATCAACATTTTTCTTCTTCCCTGGTTGGGCCAAATGGATTTTTGGCTCCCTATTGTCCCTCTTGGTACCCAGTTGGAATAAATTGCAAACTCTTGAAGATGAAGCTGAAACGATGATCGAAGAGGCTGAAAATGTAGCAGAAGTAGTAGAAAAGGTAGCAGAATTAACAGAGAAGGTATCAGCAGAAATTGGTGACAAACTACCTGAAAAGAGTAAGCTTAAAGAGGCAGCTCATATTGTAGAAAACTATTCTAAGGAAATTGCTCATGATGCTCACCTAACCCAAGATATCCTCCATAAGGTGGAAGAGTGGAAGCAAAAGCTAGATAAGTCGGAGACAACTGTGAATGAACAGATTAAGAAGAAATAA

Protein sequence

MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQASSVAIVPVRLSLFGSATYMSSLFRSYCPRIRHNQDKDQPLTSTFFFFPGWAKWIFGSLLSLLVPSWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKKK

Homology

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BLAST of Lsi03G007310 vs. TrEMBL
Match: A0A0A0K622_CUCSA (Alkyl transferase OS=Cucumis sativus GN=Csa_7G064570 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.2e-61
Identity = 145/219 (66.21%), Postives = 163/219 (74.43%), Query Frame = 1


Query: 1   MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQASS------VAIVPVRLSLF 60
           MSSKFGH WR+ LLQLF K D S   S    RR  SE  QASS      VA+VP     F
Sbjct: 265 MSSKFGH-WRTLLLQLFRKTDDS---SSTYRRRRVSEPLQASSSSSSSSVAMVP-----F 324

Query: 61  GSATYMSSLFRSYCPRI-------RHNQDKDQPLTSTFFFF--PGWAKWIFGSLLSLLVP 120
           GS TYMSSL RSYC R          ++D+D+P  STFFFF  P WAKWIFG+LLSLLVP
Sbjct: 325 GSTTYMSSLLRSYCCRPSWMRREKEESKDEDRPSISTFFFFVPPNWAKWIFGALLSLLVP 384

Query: 121 SWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENY 180
           +WNKLQ +EDEAE +IEEAENVAEVVEKVAELTEKVS +I +KLPEKSKLKEAA +VE+Y
Sbjct: 385 NWNKLQRIEDEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESY 444

Query: 181 SKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKKK 205
           SKEIAHDAHLTQDILHKVEEWK K+DKS+   NE  K++
Sbjct: 445 SKEIAHDAHLTQDILHKVEEWKLKVDKSKIDTNEPNKEE 474

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BLAST of Lsi03G007310 vs. TrEMBL
Match: C6T1F0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-24
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 1


Query: 71  IRHNQDKDQPLTSTFFFFPGWAKWIFGSLLSLLVPSWN----KLQTLEDEAETMIEEAEN 130
           ++   +   P +  F FFP W +W+ G +LSLL+P W     KLQ ++ EAE ++EEAE 
Sbjct: 71  VKAQPEAPAPASKIFTFFPHWLRWVLGMVLSLLLPFWKSYWRKLQIIQAEAEFVVEEAEA 130

Query: 131 VAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW 190
           VA+VVEKVA + EKVS ++ + LPE  KL++AA +VE  SKE AHDA LT++ +HKVEE 
Sbjct: 131 VAKVVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQLTEEFIHKVEEL 190

Query: 191 KQKLDKSETTVNEQIKK 204
           K  LD  E  V   I K
Sbjct: 191 KNDLDDLEAFVEPVIDK 207

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BLAST of Lsi03G007310 vs. TrEMBL
Match: I1LX64_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G042400 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-24
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 1


Query: 71  IRHNQDKDQPLTSTFFFFPGWAKWIFGSLLSLLVPSWN----KLQTLEDEAETMIEEAEN 130
           ++   +   P +  F FFP W +W+ G +LSLL+P W     KLQ ++ EAE ++EEAE 
Sbjct: 71  VKAQPEAPAPASKIFTFFPHWLRWVLGMVLSLLLPFWKSYWRKLQIIQAEAEFVVEEAEA 130

Query: 131 VAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW 190
           VA+VVEKVA + EKVS ++ + LPE  KL++AA +VE  SKE AHDA LT++ +HKVEE 
Sbjct: 131 VAKVVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQLTEEFIHKVEEL 190

Query: 191 KQKLDKSETTVNEQIKK 204
           K  LD  E  V   I K
Sbjct: 191 KNDLDDLEAFVEPVIDK 207

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BLAST of Lsi03G007310 vs. TrEMBL
Match: A0A0B2P142_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_047136 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-24
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 1


Query: 71  IRHNQDKDQPLTSTFFFFPGWAKWIFGSLLSLLVPSWN----KLQTLEDEAETMIEEAEN 130
           ++   +   P +  F FFP W +W+ G +LSLL+P W     KLQ ++ EAE ++EEAE 
Sbjct: 71  VKAQPEAPAPASKIFTFFPHWLRWVLGMVLSLLLPFWKSYWRKLQIIQAEAEFVVEEAEA 130

Query: 131 VAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW 190
           VA+VVEKVA + EKVS ++ + LPE  KL++AA +VE  SKE AHDA LT++ +HKVEE 
Sbjct: 131 VAKVVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQLTEEFIHKVEEL 190

Query: 191 KQKLDKSETTVNEQIKK 204
           K  LD  E  V   I K
Sbjct: 191 KNDLDDLEAFVEPVIDK 207

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BLAST of Lsi03G007310 vs. TrEMBL
Match: A0A059ATI9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02631 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-23
Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 1


Query: 88  FPGWAKWIFGSLLSLLVP----SWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSA 147
           FP W KW+ GS+LSLL+P     W+KL+ +E EAE +IE AE VAEV+EKVA + EKVSA
Sbjct: 83  FPPWVKWVMGSILSLLIPFWKLKWDKLRQIEGEAEEVIEGAEIVAEVLEKVATVAEKVSA 142

Query: 148 EIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKK 204
           ++ DKLP+ SKLKEAA  VE+ S+  A DAHLT D +HKV+E KQ++   ET V   I+K
Sbjct: 143 QVADKLPDDSKLKEAALFVEHVSEVTARDAHLTDDFIHKVDEVKQEV---ETAVETGIQK 199

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BLAST of Lsi03G007310 vs. TAIR10
Match: AT2G14095.1 (AT2G14095.1 unknown protein)

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-25
Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 1


Query: 74  NQDKDQPLT-STFFFFPGWAKWIFGSLLSLLVPSWN-----KLQTLEDEAETMIEEAENV 133
           N  K QP   + +F FP W +W+ GS +SL++  WN     KL+ +E EAE ++E  E V
Sbjct: 75  NDSKMQPSPPNQWFNFPSWGRWVIGSAISLVLSFWNNERLQKLKRIEGEAELVVEGVEAV 134

Query: 134 AEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEWK 193
           AE+VEKVA  T++++ E+ +KLPEK+KLK+ A ++E+ S+  AH+AHLTQD LHKVE+  
Sbjct: 135 AEMVEKVATATDEMAEEMAEKLPEKNKLKQVALVLEHISEVAAHEAHLTQDFLHKVEKVT 194

Query: 194 QKLDKSETTVNEQIKKK 205
           Q +D  E  +   I KK
Sbjct: 195 QDIDDLEAMIKPLIDKK 211

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BLAST of Lsi03G007310 vs. NCBI nr
Match: gi|659110320|ref|XP_008455165.1| (PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 5.7e-61
Identity = 138/212 (65.09%), Postives = 158/212 (74.53%), Query Frame = 1


Query: 1   MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICR---RWKSELPQASSVAIVPVRLSLFGSA 60
           MSSKFGH WR+ LLQLF K D S+     + R   R    L  +SSVA+V      FGS 
Sbjct: 1   MSSKFGH-WRTMLLQLFRKTDNSSSTDVALHRPRRRVSEPLQGSSSVAMVVP----FGST 60

Query: 61  TYMSSLFRSYCPRIRHNQDKDQ-----PLTSTFFFFPGWAKWIFGSLLSLLVPSWNKLQT 120
           TY+SSL RSY  R R    K +     P +STFFFFP WAKWIFG+LLSLLVP+WN LQ 
Sbjct: 61  TYLSSLLRSYYGRPRMRPQKKEIKDHRPSSSTFFFFPAWAKWIFGTLLSLLVPNWNTLQR 120

Query: 121 LEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHD 180
           +EDEAE ++EE ENVAEVVEKVAELTEKVS EI +KLPEKSKLKEAA +VENYSKEIAHD
Sbjct: 121 IEDEAEMVMEEVENVAEVVEKVAELTEKVSTEISEKLPEKSKLKEAAQVVENYSKEIAHD 180

Query: 181 AHLTQDILHKVEEWKQKLDKSETTVNEQIKKK 205
           AHLTQDILHKVEEWKQK+DKS+  +NE  K++
Sbjct: 181 AHLTQDILHKVEEWKQKIDKSKIDMNESNKER 207

[Close]

BLAST of Lsi03G007310 vs. NCBI nr
Match: gi|778724472|ref|XP_011658811.1| (PREDICTED: uncharacterized protein LOC105436091 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 7.5e-61
Identity = 145/219 (66.21%), Postives = 163/219 (74.43%), Query Frame = 1


Query: 1   MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQASS------VAIVPVRLSLF 60
           MSSKFGH WR+ LLQLF K D S   S    RR  SE  QASS      VA+VP     F
Sbjct: 1   MSSKFGH-WRTLLLQLFRKTDDS---SSTYRRRRVSEPLQASSSSSSSSVAMVP-----F 60

Query: 61  GSATYMSSLFRSYCPRI-------RHNQDKDQPLTSTFFFF--PGWAKWIFGSLLSLLVP 120
           GS TYMSSL RSYC R          ++D+D+P  STFFFF  P WAKWIFG+LLSLLVP
Sbjct: 61  GSTTYMSSLLRSYCCRPSWMRREKEESKDEDRPSISTFFFFVPPNWAKWIFGALLSLLVP 120

Query: 121 SWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENY 180
           +WNKLQ +EDEAE +IEEAENVAEVVEKVAELTEKVS +I +KLPEKSKLKEAA +VE+Y
Sbjct: 121 NWNKLQRIEDEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESY 180

Query: 181 SKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKKK 205
           SKEIAHDAHLTQDILHKVEEWK K+DKS+   NE  K++
Sbjct: 181 SKEIAHDAHLTQDILHKVEEWKLKVDKSKIDTNEPNKEE 210

[Close]

BLAST of Lsi03G007310 vs. NCBI nr
Match: gi|700188514|gb|KGN43747.1| (hypothetical protein Csa_7G064570 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 7.5e-61
Identity = 145/219 (66.21%), Postives = 163/219 (74.43%), Query Frame = 1


Query: 1   MSSKFGHFWRSWLLQLFPKIDTSTPGSGLICRRWKSELPQASS------VAIVPVRLSLF 60
           MSSKFGH WR+ LLQLF K D S   S    RR  SE  QASS      VA+VP     F
Sbjct: 265 MSSKFGH-WRTLLLQLFRKTDDS---SSTYRRRRVSEPLQASSSSSSSSVAMVP-----F 324

Query: 61  GSATYMSSLFRSYCPRI-------RHNQDKDQPLTSTFFFF--PGWAKWIFGSLLSLLVP 120
           GS TYMSSL RSYC R          ++D+D+P  STFFFF  P WAKWIFG+LLSLLVP
Sbjct: 325 GSTTYMSSLLRSYCCRPSWMRREKEESKDEDRPSISTFFFFVPPNWAKWIFGALLSLLVP 384

Query: 121 SWNKLQTLEDEAETMIEEAENVAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENY 180
           +WNKLQ +EDEAE +IEEAENVAEVVEKVAELTEKVS +I +KLPEKSKLKEAA +VE+Y
Sbjct: 385 NWNKLQRIEDEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESY 444

Query: 181 SKEIAHDAHLTQDILHKVEEWKQKLDKSETTVNEQIKKK 205
           SKEIAHDAHLTQDILHKVEEWK K+DKS+   NE  K++
Sbjct: 445 SKEIAHDAHLTQDILHKVEEWKLKVDKSKIDTNEPNKEE 474

[Close]

BLAST of Lsi03G007310 vs. NCBI nr
Match: gi|351723523|ref|NP_001236514.1| (uncharacterized protein LOC100500336 [Glycine max])

HSP 1 Score: 120.2 bits (300), Expect = 4.3e-24
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 1


Query: 71  IRHNQDKDQPLTSTFFFFPGWAKWIFGSLLSLLVPSWN----KLQTLEDEAETMIEEAEN 130
           ++   +   P +  F FFP W +W+ G +LSLL+P W     KLQ ++ EAE ++EEAE 
Sbjct: 71  VKAQPEAPAPASKIFTFFPHWLRWVLGMVLSLLLPFWKSYWRKLQIIQAEAEFVVEEAEA 130

Query: 131 VAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW 190
           VA+VVEKVA + EKVS ++ + LPE  KL++AA +VE  SKE AHDA LT++ +HKVEE 
Sbjct: 131 VAKVVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQLTEEFIHKVEEL 190

Query: 191 KQKLDKSETTVNEQIKK 204
           K  LD  E  V   I K
Sbjct: 191 KNDLDDLEAFVEPVIDK 207

[Close]

BLAST of Lsi03G007310 vs. NCBI nr
Match: gi|734313368|gb|KHN01278.1| (hypothetical protein glysoja_047136 [Glycine soja])

HSP 1 Score: 120.2 bits (300), Expect = 4.3e-24
Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = 1


Query: 71  IRHNQDKDQPLTSTFFFFPGWAKWIFGSLLSLLVPSWN----KLQTLEDEAETMIEEAEN 130
           ++   +   P +  F FFP W +W+ G +LSLL+P W     KLQ ++ EAE ++EEAE 
Sbjct: 71  VKAQPEAPAPASKIFTFFPHWLRWVLGMVLSLLLPFWKSYWRKLQIIQAEAEFVVEEAEA 130

Query: 131 VAEVVEKVAELTEKVSAEIGDKLPEKSKLKEAAHIVENYSKEIAHDAHLTQDILHKVEEW 190
           VA+VVEKVA + EKVS ++ + LPE  KL++AA +VE  SKE AHDA LT++ +HKVEE 
Sbjct: 131 VAKVVEKVATVAEKVSEDVAEMLPENGKLRKAALVVERASKEAAHDAQLTEEFIHKVEEL 190

Query: 191 KQKLDKSETTVNEQIKK 204
           K  LD  E  V   I K
Sbjct: 191 KNDLDDLEAFVEPVIDK 207

The following BLAST results are available for this feature:

BLAST of Lsi03G007310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi03G007310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K622_CUCSA	5.2e-61	66.21	Alkyl transferase OS=Cucumis sativus GN=Csa_7G064570 PE=3 SV=1	[more]
C6T1F0_SOYBN	3.0e-24	48.18	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
I1LX64_SOYBN	3.0e-24	48.18	Uncharacterized protein OS=Glycine max GN=GLYMA_13G042400 PE=4 SV=1	[more]
A0A0B2P142_GLYSO	3.0e-24	48.18	Uncharacterized protein OS=Glycine soja GN=glysoja_047136 PE=4 SV=1	[more]
A0A059ATI9_EUCGR	1.1e-23	56.67	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02631 PE=4 SV=1	[more]

BLAST of Lsi03G007310 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14095.1	3.2e-25	45.99	unknown protein	[more]

BLAST of Lsi03G007310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110320\|ref\|XP_008455165.1\|	5.7e-61	65.09	PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo]	[more]
gi\|778724472\|ref\|XP_011658811.1\|	7.5e-61	66.21	PREDICTED: uncharacterized protein LOC105436091 [Cucumis sativus]	[more]
gi\|700188514\|gb\|KGN43747.1\|	7.5e-61	66.21	hypothetical protein Csa_7G064570 [Cucumis sativus]	[more]
gi\|351723523\|ref\|NP_001236514.1\|	4.3e-24	48.18	uncharacterized protein LOC100500336 [Glycine max]	[more]
gi\|734313368\|gb\|KHN01278.1\|	4.3e-24	48.18	hypothetical protein glysoja_047136 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G007310.1	Lsi03G007310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 110..141 score: -coord: 183..203 scor
None	No IPR available	PANTHER	PTHR33735	FAMILY NOT NAMED	coord: 79..204 score: 3.2
None	No IPR available	PANTHER	PTHR33735:SF4	EXPRESSED PROTEIN	coord: 79..204 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G007310	Csa7G064570	Cucumber (Chinese Long) v2	culsiB522
Lsi03G007310	CSPI07G05800	Wild cucumber (PI 183967)	cpilsiB536
Lsi03G007310	Cucsa.218170	Cucumber (Gy14) v1	cgylsiB367
Lsi03G007310	CmaCh19G004670	Cucurbita maxima (Rimu)	cmalsiB484
Lsi03G007310	MELO3C018616	Melon (DHL92) v3.5.1	lsimeB247
Lsi03G007310	ClCG09G015950	Watermelon (Charleston Gray)	lsiwcgB213
Lsi03G007310	MELO3C018616.2	Melon (DHL92) v3.6.1	lsimedB260
Lsi03G007310	Cla97C09G177760	Watermelon (97103) v2	lsiwmbB248
Lsi03G007310	Bhi05G000738	Wax gourd	lsiwgoB320
Lsi03G007310	Cp4.1LG15g03660	Cucurbita pepo (Zucchini)	cpelsiB208
Lsi03G007310	CsGy7G005500	Cucumber (Gy14) v2	cgyblsiB489
Lsi03G007310	Carg22821	Silver-seed gourd	carlsiB262
Lsi03G007310	CsaV3_7G006790	Cucumber (Chinese Long) v3	cuclsiB555

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G007310	Silver-seed gourd	carlsiB338
Lsi03G007310	Silver-seed gourd	carlsiB888
Lsi03G007310	Watermelon (97103) v2	lsiwmbB251
Lsi03G007310	Cucurbita maxima (Rimu)	cmalsiB117
Lsi03G007310	Cucurbita maxima (Rimu)	cmalsiB482
Lsi03G007310	Cucurbita moschata (Rifu)	cmolsiB104
Lsi03G007310	Cucurbita moschata (Rifu)	cmolsiB466
Lsi03G007310	Cucurbita moschata (Rifu)	cmolsiB468
Lsi03G007310	Cucurbita pepo (Zucchini)	cpelsiB206
Lsi03G007310	Cucurbita pepo (Zucchini)	cpelsiB544
Lsi03G007310	Watermelon (Charleston Gray)	lsiwcgB215
Lsi03G007310	Watermelon (97103) v1	lsiwmB233