CmoCh19G004830 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G004830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr19 : 5772449 .. 5775811 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAACAACAATCCATCATATTTCATCATCTTCAAATCCTCTGACCCTTTACTTTCTTGTGTTCATCCGCCGTCTCGTCTTCGGAGATCCTCACCGGAGAAGCCGCCGCCCGCCGTCCGTCATGTCGTCCAACTCTGGTCATTTCTGGAGCTTCACAATCCTCAGATTCCGAACCTTGCTTCTTCAACTTTCTAATAAGATAAACACCTCCGCCCCCGCCGGTGGGTTCCGTCGTCGTCCGGTATCTGAGCCGCCGCAGAGCTCCTCCGTTGCCGTGGTTCCGTACAGCTTCCGTTCCTTTGGTCTGTCGTCCCTCCTCAGATCTTTTTGTCCCAGGTTAGTTACTTCTCTTTAATGGTGGGCTTTTGAATTTTTTTATTAATTAAATTAATAAAAATACTTATAAAAATTATCGGTTCAAAAATAGTTTAAATAATACTTTTAATAAATGAAAAATATTTTTAGTGTTTATTATTATTATTATTATTTAGGAAAATAGTGAGTAATTGTTTTAAAAAAAATACATTTCAAAAAGAAGTATTAATAAAAAATTTAAAAATATTAATTAAACTTTGAAAGCTCTATATTTAAGATATTTTTGTAAAATTGTACAATATTTTGAAAATAAAATATTAAGGATTTTCATCTAAAATTAAAATTAAAATAAAGTTTTTCATTTTTTTTAAAATTTTTTTTAAGGATAATATTAAAATTTTTAAACTGATATTTTAATTTTAATTTTTATCGTCGAGTCATTTTTTTAATTAATCGAAAACTACTATACAAATTACTAATATTATTTTTCAAATAGAAGATTGCGCGATAAAAAAAATTATTATTAATATTTGCAAAATTTAATTAAACATAAGGTCAAATTTCTTCTTCCCTAGTTGGTAAGTCAAAACATTGAAAATTTAAAATGAAAAAATCATTTTTTATTTTTCTTTTTTTATTTTCTGACTTTACATTATTTTATTTATTTATTTATTTATTTATTATTTTGGATTTAATGAATTTAGGGCAAAATGGATATTTGGGTCCCTATTGTCCCTCTTGGTACCTAGTTGGAATAAATGGCAAGCTTTTGAAGGTATATATTTAATTTATTTCTTAAAATATTATCTTTTTTTTTTTCTTAAAATATTATTGCATGCCAAATTTCTAAAATCAATAATCCAAAATGATATTTTTAAGGTTAAATTAATTTTTAAAAATACCATTAAATTTTTATATTTGGTCTAAAAAATACTTAAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTATGATTTGTTTTTAGATGAAAATGTATTTCGTTACCAAAAGTATTTTTAAATTATTTTTAAATTTTTTTAAAAAAAAATTCATTAATTTAAAACAAAGTTAAAATAATAATAATAAATAATTTAAAAGTTTTGTAAAAGTTTTAAAGTTGAAGGGTAATTAATTAAAGTAAAATTTTGAAATAAATATTATCAATTTTCATTTTAAAAAAATTCAAGGCTATTTTTGAAATTTAATAAATTTCCATTACATTATTCAAATATTTATATAATAATATATAATAAAAATTATTAACGAACTTCTACTAGACTTTACAGATCCTCCCTGATTCTTCCGATCTTTCGTTATTTAGTTATACTATAAATTGATGTGTTATGTATCGATCTTGAATGGTTAGACGAAGCGGAAAAGATGATCGAAGAGGCGGAAAATGTGGCAGAAGTAGTAGAAAAGGTAGCAGAGTTAACAGAGAAGGTATCAGCAGAAATTGGGGAGAAAGTTGGTGAGGAGAGTAAGGTGAAAGAAGCAGCTGAAGTGGTAGAGAAGTATTCCAAGGAAATTGCCCATCATGCCCTCCTAGCACAACACATCCTCCACAAGGTTCCATATTTATTAATTAAAATTACCTCTAAAAAATAATAATAATAATAATAATAATTAAAATTAAAATTAAACCGTGAAATTGTCCGCTTAGTATGATATTGTTCACCTTGAGCGTAACCTCGTACCAATGAAAAGAGTACAATTCTCTAGTCTTGCTATGAGCTTCCTAAAAGGCCTCAAATCTCATACCAATGGTCCCAAAAAGCCTCGTACCAATGGAAAAAGTAGCTCCTCTTCGGGGCTTGGCTTTGGATTCCTTAAAGGGGTGTCTCAAGTCTGATACCAATAGTCCCAAAAGGCTCCTCAAGCCTCGTACCAATAGAGAGAGGTTTGGTTTTCGATAGTATTCATTGATTATAGACAAATCATTATTTATCCAACACACCCCACCCATTTTATCCATTCATCCAACACTAATCTCATGTTAAATAAATACGATTCTCCACAATCGAATGATATAATGAAAAAAGCATCCTTGATTATAAAAATCTCTGATCCAAACACCTCTCCCCGTGTTAAATGAACACACAACTCTTCGGAATCGAATAATCGTTTTAAAAAAAGAATTAAAATACCACAAATTATTGTTAATATTAATAATTTCTTTCAATATTTTGATTGTAGGTGGAAGAATGGAAGCAAAAGCTAGACAAATCAAAGGCAGATATTAATGAACAGATGAAAAAGAAAGAAGAATAGTAAATTAATTCAATCCATAA

mRNA sequence

GCAACAACAATCCATCATATTTCATCATCTTCAAATCCTCTGACCCTTTACTTTCTTGTGTTCATCCGCCGTCTCGTCTTCGGAGATCCTCACCGGAGAAGCCGCCGCCCGCCGTCCGTCATGTCGTCCAACTCTGGTCATTTCTGGAGCTTCACAATCCTCAGATTCCGAACCTTGCTTCTTCAACTTTCTAATAAGATAAACACCTCCGCCCCCGCCGGTGGGTTCCGTCGTCGTCCGGTATCTGAGCCGCCGCAGAGCTCCTCCGTTGCCGTGGTTCCGTACAGCTTCCGTTCCTTTGGTCTGTCGTCCCTCCTCAGATCTTTTTGTCCCAGGGCAAAATGGATATTTGGGTCCCTATTGTCCCTCTTGGTACCTAGTTGGAATAAATGGCAAGCTTTTGAAGACGAAGCGGAAAAGATGATCGAAGAGGCGGAAAATGTGGCAGAAGTAGTAGAAAAGGTAGCAGAGTTAACAGAGAAGGTATCAGCAGAAATTGGGGAGAAAGTTGGTGAGGAGAGTAAGGTGAAAGAAGCAGCTGAAGTGGTAGAGAAGTATTCCAAGGAAATTGCCCATCATGCCCTCCTAGCACAACACATCCTCCACAAGGTGGAAGAATGGAAGCAAAAGCTAGACAAATCAAAGGCAGATATTAATGAACAGATGAAAAAGAAAGAAGAATAGTAAATTAATTCAATCCATAA

Coding sequence (CDS)

ATGTCGTCCAACTCTGGTCATTTCTGGAGCTTCACAATCCTCAGATTCCGAACCTTGCTTCTTCAACTTTCTAATAAGATAAACACCTCCGCCCCCGCCGGTGGGTTCCGTCGTCGTCCGGTATCTGAGCCGCCGCAGAGCTCCTCCGTTGCCGTGGTTCCGTACAGCTTCCGTTCCTTTGGTCTGTCGTCCCTCCTCAGATCTTTTTGTCCCAGGGCAAAATGGATATTTGGGTCCCTATTGTCCCTCTTGGTACCTAGTTGGAATAAATGGCAAGCTTTTGAAGACGAAGCGGAAAAGATGATCGAAGAGGCGGAAAATGTGGCAGAAGTAGTAGAAAAGGTAGCAGAGTTAACAGAGAAGGTATCAGCAGAAATTGGGGAGAAAGTTGGTGAGGAGAGTAAGGTGAAAGAAGCAGCTGAAGTGGTAGAGAAGTATTCCAAGGAAATTGCCCATCATGCCCTCCTAGCACAACACATCCTCCACAAGGTGGAAGAATGGAAGCAAAAGCTAGACAAATCAAAGGCAGATATTAATGAACAGATGAAAAAGAAAGAAGAATAG

Homology

[Close]

BLAST of CmoCh19G004830 vs. TrEMBL
Match: A0A0A0K622_CUCSA (Alkyl transferase OS=Cucumis sativus GN=Csa_7G064570 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33
Identity = 86/113 (76.11%), Postives = 96/113 (84.96%), Query Frame = 1


Query: 73  AKWIFGSLLSLLVPSWNKWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGE 132
           AKWIFG+LLSLLVP+WNK Q  EDEAE +IEEAENVAEVVEKVAELTEKVS +I EK+ E
Sbjct: 362 AKWIFGALLSLLVPNWNKLQRIEDEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPE 421

Query: 133 ESKVKEAAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKKK 186
           +SK+KEAAEVVE YSKEIAH A L Q ILHKVEEWK K+DKSK D NE  K++
Sbjct: 422 KSKLKEAAEVVESYSKEIAHDAHLTQDILHKVEEWKLKVDKSKIDTNEPNKEE 474

[Close]

BLAST of CmoCh19G004830 vs. TrEMBL
Match: V7CLM6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G211100g PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 71/166 (42.77%), Postives = 95/166 (57.23%), Query Frame = 1


Query: 24  SNKINTSAPAGGFRRRPV-SEPPQSSSVAVVPYSFRSFGLSSLLRSFCPRAKWIFGSLLS 83
           +N INTS  A G +   V SE P S+      ++ +SF  S  LR       W+ G +LS
Sbjct: 59  TNSINTSTNAKGIKGEKVQSELPASA------HASKSFAFSYWLR-------WVLGMVLS 118

Query: 84  LLVPSWN----KWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGEESKVKE 143
           LLVP W     K Q  E E E +IEEA+ VA+VVEKVA + EKVS ++ E + E+ K+++
Sbjct: 119 LLVPFWKPYWGKLQRIEGEVEFVIEEADAVAKVVEKVATVAEKVSEDVAEMLPEDGKLRK 178

Query: 144 AAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKK 185
           A  VVE  SKE AH A L Q  +HKVEE K  L+  +A +   + K
Sbjct: 179 ATLVVEHASKEAAHDAQLTQQFIHKVEELKNDLNDIEAFVEPVIDK 211

[Close]

BLAST of CmoCh19G004830 vs. TrEMBL
Match: A0A0L9TEN0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan630s001900 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-15
Identity = 70/165 (42.42%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 24  SNKINTSAPAGGFRRRPVSEPPQSSSVAVVPYSFRSFGLSSLLRSFCPRAKWIFGSLLSL 83
           +N  NTS  A G     V   P     A   ++ +SF  S  LR       WI G  LS+
Sbjct: 59  TNSNNTSTNAKGINDEQVQPEP-----AAPAHASKSFAFSYWLR-------WILGMTLSV 118

Query: 84  LVPSWN----KWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGEESKVKEA 143
           L+P W     K Q  E EAE +IEEAE VA+VVEKVA + EKVS ++ E + E+ K+++A
Sbjct: 119 LLPFWKPYWEKLQRIEGEAEFVIEEAEAVAKVVEKVASVAEKVSEDVAEMLPEDGKLRKA 178

Query: 144 AEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKK 185
             VVE  SKE AH A L Q  +HKVEE K  LD  +A +   + K
Sbjct: 179 TLVVEHASKEAAHDAQLTQQFIHKVEELKNDLDDIQAFVEPVIDK 211

[Close]

BLAST of CmoCh19G004830 vs. TrEMBL
Match: A0A0S3R011_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G150500 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-15
Identity = 70/165 (42.42%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 24  SNKINTSAPAGGFRRRPVSEPPQSSSVAVVPYSFRSFGLSSLLRSFCPRAKWIFGSLLSL 83
           +N  NTS  A G     V   P     A   ++ +SF  S  LR       WI G  LS+
Sbjct: 59  TNSNNTSTNAKGINDEQVQPEP-----AAPAHASKSFAFSYWLR-------WILGMTLSV 118

Query: 84  LVPSWN----KWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGEESKVKEA 143
           L+P W     K Q  E EAE +IEEAE VA+VVEKVA + EKVS ++ E + E+ K+++A
Sbjct: 119 LLPFWKPYWEKLQRIEGEAEFVIEEAEAVAKVVEKVASVAEKVSEDVAEMLPEDGKLRKA 178

Query: 144 AEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKK 185
             VVE  SKE AH A L Q  +HKVEE K  LD  +A +   + K
Sbjct: 179 TLVVEHASKEAAHDAQLTQQFIHKVEELKNDLDDIQAFVEPVIDK 211

[Close]

BLAST of CmoCh19G004830 vs. TrEMBL
Match: V4SE12_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030152mg PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.8e-15
Identity = 54/104 (51.92%), Postives = 72/104 (69.23%), Query Frame = 1


Query: 73  AKWIFGSLLSLLVPSWN-KWQAF---EDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGE 132
           AKWI GS+LSLL+P W  KW+     E EAE +IEE E  AEVVEKVA + E VSAE+ E
Sbjct: 90  AKWILGSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAE 149

Query: 133 KVGEESKVKEAAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLD 173
            + + +K K+AA  VE+ +KE AH A L ++ +HKV+E KQ ++
Sbjct: 150 ILPDHTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDIN 193

[Close]

BLAST of CmoCh19G004830 vs. TAIR10
Match: AT2G14095.1 (AT2G14095.1 unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 60/170 (35.29%), Postives = 93/170 (54.71%), Query Frame = 1


Query: 21  LQLSNKINTSAPAGGFRRRPVSEPPQSSSVAVVPYSFRSFGLSSLLRSFCPRAKWIFGSL 80
           L+LSN +N    AG +     ++     S     ++F S+G            +W+ GS 
Sbjct: 58  LKLSNPLN----AGRYFSNVSNDSKMQPSPPNQWFNFPSWG------------RWVIGSA 117

Query: 81  LSLLVPSWN-----KWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGEESK 140
           +SL++  WN     K +  E EAE ++E  E VAE+VEKVA  T++++ E+ EK+ E++K
Sbjct: 118 ISLVLSFWNNERLQKLKRIEGEAELVVEGVEAVAEMVEKVATATDEMAEEMAEKLPEKNK 177

Query: 141 VKEAAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKKK 186
           +K+ A V+E  S+  AH A L Q  LHKVE+  Q +D  +A I   + KK
Sbjct: 178 LKQVALVLEHISEVAAHEAHLTQDFLHKVEKVTQDIDDLEAMIKPLIDKK 211

[Close]

BLAST of CmoCh19G004830 vs. NCBI nr
Match: gi|659110320|ref|XP_008455165.1| (PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo])

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 112/217 (51.61%), Postives = 132/217 (60.83%), Query Frame = 1


Query: 1   MSSNSGHFWSFTILRFRTLLLQLSNKINTSAPAGGFRRRP---VSEPPQ--SSSVAVVPY 60
           MSS  GH+        RT+LLQL  K + S+       RP   VSEP Q  SS   VVP+
Sbjct: 1   MSSKFGHW--------RTMLLQLFRKTDNSSSTDVALHRPRRRVSEPLQGSSSVAMVVPF 60

Query: 61  SFRSF-------------------------GLSSLLRSFCPRAKWIFGSLLSLLVPSWNK 120
              ++                           SS    F   AKWIFG+LLSLLVP+WN 
Sbjct: 61  GSTTYLSSLLRSYYGRPRMRPQKKEIKDHRPSSSTFFFFPAWAKWIFGTLLSLLVPNWNT 120

Query: 121 WQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGEESKVKEAAEVVEKYSKEI 180
            Q  EDEAE ++EE ENVAEVVEKVAELTEKVS EI EK+ E+SK+KEAA+VVE YSKEI
Sbjct: 121 LQRIEDEAEMVMEEVENVAEVVEKVAELTEKVSTEISEKLPEKSKLKEAAQVVENYSKEI 180

Query: 181 AHHALLAQHILHKVEEWKQKLDKSKADINEQMKKKEE 188
           AH A L Q ILHKVEEWKQK+DKSK D+NE  K++ +
Sbjct: 181 AHDAHLTQDILHKVEEWKQKIDKSKIDMNESNKERNK 209

[Close]

BLAST of CmoCh19G004830 vs. NCBI nr
Match: gi|778724472|ref|XP_011658811.1| (PREDICTED: uncharacterized protein LOC105436091 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 86/113 (76.11%), Postives = 96/113 (84.96%), Query Frame = 1


Query: 73  AKWIFGSLLSLLVPSWNKWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGE 132
           AKWIFG+LLSLLVP+WNK Q  EDEAE +IEEAENVAEVVEKVAELTEKVS +I EK+ E
Sbjct: 98  AKWIFGALLSLLVPNWNKLQRIEDEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPE 157

Query: 133 ESKVKEAAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKKK 186
           +SK+KEAAEVVE YSKEIAH A L Q ILHKVEEWK K+DKSK D NE  K++
Sbjct: 158 KSKLKEAAEVVESYSKEIAHDAHLTQDILHKVEEWKLKVDKSKIDTNEPNKEE 210

[Close]

BLAST of CmoCh19G004830 vs. NCBI nr
Match: gi|700188514|gb|KGN43747.1| (hypothetical protein Csa_7G064570 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33
Identity = 86/113 (76.11%), Postives = 96/113 (84.96%), Query Frame = 1


Query: 73  AKWIFGSLLSLLVPSWNKWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGE 132
           AKWIFG+LLSLLVP+WNK Q  EDEAE +IEEAENVAEVVEKVAELTEKVS +I EK+ E
Sbjct: 362 AKWIFGALLSLLVPNWNKLQRIEDEAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPE 421

Query: 133 ESKVKEAAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKKK 186
           +SK+KEAAEVVE YSKEIAH A L Q ILHKVEEWK K+DKSK D NE  K++
Sbjct: 422 KSKLKEAAEVVESYSKEIAHDAHLTQDILHKVEEWKLKVDKSKIDTNEPNKEE 474

[Close]

BLAST of CmoCh19G004830 vs. NCBI nr
Match: gi|719968883|ref|XP_010266756.1| (PREDICTED: uncharacterized protein LOC104604186 [Nelumbo nucifera])

HSP 1 Score: 92.8 bits (229), Expect = 6.7e-16
Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 1


Query: 68  SFCPRAKWIFGSLLSLLVPSW-NKWQ---AFEDEAEKMIEEAENVAEVVEKVAELTEKVS 127
           SF   AKW+ GS+LSL +P W +KW+     EDE E + E  ENVA  VEKVA + EKVS
Sbjct: 91  SFSSWAKWVLGSILSLFLPFWKHKWENLLRLEDEVEMVAERVENVARAVEKVASVAEKVS 150

Query: 128 AEIGEKVGEESKVKEAAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLD 173
           AE+ + +  + K+KEAA +VE+ SKE A  A LAQ I+H+ +E KQ+LD
Sbjct: 151 AEVADIIPHDGKLKEAALLVERVSKETAKDAQLAQDIVHQADELKQELD 199

[Close]

BLAST of CmoCh19G004830 vs. NCBI nr
Match: gi|593792178|ref|XP_007159128.1| (hypothetical protein PHAVU_002G211100g [Phaseolus vulgaris])

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 71/166 (42.77%), Postives = 95/166 (57.23%), Query Frame = 1


Query: 24  SNKINTSAPAGGFRRRPV-SEPPQSSSVAVVPYSFRSFGLSSLLRSFCPRAKWIFGSLLS 83
           +N INTS  A G +   V SE P S+      ++ +SF  S  LR       W+ G +LS
Sbjct: 59  TNSINTSTNAKGIKGEKVQSELPASA------HASKSFAFSYWLR-------WVLGMVLS 118

Query: 84  LLVPSWN----KWQAFEDEAEKMIEEAENVAEVVEKVAELTEKVSAEIGEKVGEESKVKE 143
           LLVP W     K Q  E E E +IEEA+ VA+VVEKVA + EKVS ++ E + E+ K+++
Sbjct: 119 LLVPFWKPYWGKLQRIEGEVEFVIEEADAVAKVVEKVATVAEKVSEDVAEMLPEDGKLRK 178

Query: 144 AAEVVEKYSKEIAHHALLAQHILHKVEEWKQKLDKSKADINEQMKK 185
           A  VVE  SKE AH A L Q  +HKVEE K  L+  +A +   + K
Sbjct: 179 ATLVVEHASKEAAHDAQLTQQFIHKVEELKNDLNDIEAFVEPVIDK 211

The following BLAST results are available for this feature:

BLAST of CmoCh19G004830 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh19G004830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K622_CUCSA	1.9e-33	76.11	Alkyl transferase OS=Cucumis sativus GN=Csa_7G064570 PE=3 SV=1	[more]
V7CLM6_PHAVU	1.0e-15	42.77	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G211100g PE=4 SV=1	[more]
A0A0L9TEN0_PHAAN	1.4e-15	42.42	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan630s001900 PE=4 SV=1	[more]
A0A0S3R011_PHAAN	1.4e-15	42.42	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G150500 PE=...	[more]
V4SE12_9ROSI	6.8e-15	51.92	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030152mg PE=4 SV=1	[more]

BLAST of CmoCh19G004830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14095.1	1.1e-13	35.29	unknown protein	[more]

BLAST of CmoCh19G004830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110320\|ref\|XP_008455165.1\|	1.5e-36	51.61	PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo]	[more]
gi\|778724472\|ref\|XP_011658811.1\|	2.7e-33	76.11	PREDICTED: uncharacterized protein LOC105436091 [Cucumis sativus]	[more]
gi\|700188514\|gb\|KGN43747.1\|	2.7e-33	76.11	hypothetical protein Csa_7G064570 [Cucumis sativus]	[more]
gi\|719968883\|ref\|XP_010266756.1\|	6.7e-16	51.38	PREDICTED: uncharacterized protein LOC104604186 [Nelumbo nucifera]	[more]
gi\|593792178\|ref\|XP_007159128.1\|	1.5e-15	42.77	hypothetical protein PHAVU_002G211100g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004830.1	CmoCh19G004830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 95..122 score: -coord: 164..187 scor
None	No IPR available	PANTHER	PTHR33735	FAMILY NOT NAMED	coord: 72..187 score: 1.4
None	No IPR available	PANTHER	PTHR33735:SF4	EXPRESSED PROTEIN	coord: 72..187 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G004830	Cucsa.218170	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G004830	CmaCh19G004670	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G004830	Csa7G064570	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G004830	ClCG09G015950	Watermelon (Charleston Gray)	cmowcgB450
CmoCh19G004830	CSPI07G05800	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G004830	Cp4.1LG15g03660	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G004830	CsaV3_7G006790	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G004830	Carg22821	Silver-seed gourd	carcmoB0397

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G004830	Watermelon (97103) v2	cmowmbB531
CmoCh19G004830	Wax gourd	cmowgoB0642
CmoCh19G004830	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G004830	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G004830	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G004830	Watermelon (Charleston Gray)	cmowcgB441
CmoCh19G004830	Watermelon (97103) v1	cmowmB466
CmoCh19G004830	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G004830	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G004830	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G004830	Melon (DHL92) v3.6.1	cmomedB523