CmaCh17G000980 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCACTGCCATTCCGTCCCAATCCCTCTCTTCCTCTCCCTTTTCCTTTCCCGATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTCCGTCTCCTTTTTTTTTTATTAATTTTTTAGAAATAAATAAATAAATACATTATCGATAGATTTTTATTATTAATACTCTTGACATTGGTGTTCTATGCAGGTTATGGATCTTGTGTTTATCCATCTTCAATCAGGTACGCTAATTTTTTTTTTTTGTTTTTTCTTTCTATTTTAAAAATAAAATATTTTAATTTTCCAATTTATTAAAATGTGCATAGAAAAACCCTTTATCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATTTTGGTGGAGATTTCTTCATGTTCAAGTAAATGGGTTCACTTTTTAGAGTGTTATATTAATAATTAATTCTGAAAATCATATTTATTTGGCTTCTTTTCTTTTATTTCCCACTAATTTATTAATTTAAGATTCTTTTAAAAAATGTAATAAAATTTTCCGCCATTATTTTTAAAATTCTCGATTCTCTCGATATATATTTTTTTTCTAGCCAAGAAAATAGACATTTCTCTTTATTCTATCTTTTTGGTACAATTTTTTTACAGTATTTTGAAAATAAAAAATAACTTTTTTTTTTTTTTGCTAAAATAAACTATTTTCATTTTAAATTTAGGGGGAAAAGGGAATGTAGTAACTTCTTCTACATCTTTCTGTGGGGTTCATCTAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGTGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAATCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGAAAGCTGGTCAAGAATGGTACATGTCAGATTCTGGTTGGTCATGATTACTGCAGTTGTCAGACCCCAACCAGCCTTCTTTTTAAATAAATTCTTTTGTTTTAAAAAAAACAATTGTATTTTTAAAATAATTCAATAGAAAATAAAAATAAGCTAATGAAACAAATTTATTTCCATTTATATACCTTATTTTCGTAGTTTCATTTTTAGTCATTATTGCAAAATCAATAAAATTGATATATATATATATACATACACATGTATGTATAGATCAATCGGTCGCTCAAAATTTTTAAAATTTATATAAAGAGGAGAATAAGAATTATGTAACACAATATAGTACTCTAAATCTTGTGTTATTTGGGATGATTATCCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAGGAGGAGGGCTATGGAGGGTTCATTCAGTTTTGTTAGAAACAACATGTTCTTTTTGTGAAAACTAAATGACATAGGCAATATCAGTTAGGGTTTAGTTCAGCCTTCACAAATCTCCCTCTTTCTTCACAGGATTTGCTCATTGAATTCAATGCTTCAATTTCATTCTTCTAT TTCCACTGCCATTCCGTCCCAATCCCTCTCTTCCTCTCCCTTTTCCTTTCCCGATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAGGAGGAGGGCTATGGAGGGTTCATTCAGTTTTGTTAGAAACAACATGTTCTTTTTGTGAAAACTAAATGACATAGGCAATATCAGTTAGGGTTTAGTTCAGCCTTCACAAATCTCCCTCTTTCTTCACAGGATTTGCTCATTGAATTCAATGCTTCAATTTCATTCTTCTAT ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAG MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFSIAISLTSLTL
BLAST of CmaCh17G000980 vs. Swiss-Prot
Match: PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.4e-24 Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 1
BLAST of CmaCh17G000980 vs. Swiss-Prot
Match: PDCB1_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=PDCB1 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.0e-23 Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1
BLAST of CmaCh17G000980 vs. Swiss-Prot
Match: PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.7e-22 Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 1
BLAST of CmaCh17G000980 vs. Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19 Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = 1
BLAST of CmaCh17G000980 vs. Swiss-Prot
Match: ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18 Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TrEMBL
Match: A0A0A0LND4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139290 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 2.7e-70 Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TrEMBL
Match: A0A0B0MVW3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28364 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.9e-45 Identity = 109/171 (63.74%), Postives = 126/171 (73.68%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TrEMBL
Match: M5XQH3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026075mg PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.5e-44 Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TrEMBL
Match: A0A0D2T8S3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156800 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 5.6e-44 Identity = 106/171 (61.99%), Postives = 126/171 (73.68%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TrEMBL
Match: A0A067KWK7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01120 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 9.6e-44 Identity = 111/195 (56.92%), Postives = 139/195 (71.28%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TAIR10
Match: AT4G13600.1 (AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 174.5 bits (441), Expect = 6.6e-44 Identity = 106/203 (52.22%), Postives = 129/203 (63.55%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TAIR10
Match: AT1G18650.1 (AT1G18650.1 plasmodesmata callose-binding protein 3) HSP 1 Score: 112.5 bits (280), Expect = 3.1e-25 Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TAIR10
Match: AT5G61130.1 (AT5G61130.1 plasmodesmata callose-binding protein 1) HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24 Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TAIR10
Match: AT1G09460.1 (AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23 Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = 1
BLAST of CmaCh17G000980 vs. TAIR10
Match: AT5G08000.1 (AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 3) HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23 Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 1
BLAST of CmaCh17G000980 vs. NCBI nr
Match: gi|659114812|ref|XP_008457240.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 2 [Cucumis melo]) HSP 1 Score: 285.0 bits (728), Expect = 9.8e-74 Identity = 156/205 (76.10%), Postives = 172/205 (83.90%), Query Frame = 1
BLAST of CmaCh17G000980 vs. NCBI nr
Match: gi|778668447|ref|XP_004138961.2| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]) HSP 1 Score: 273.1 bits (697), Expect = 3.9e-70 Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 1
BLAST of CmaCh17G000980 vs. NCBI nr
Match: gi|470124133|ref|XP_004298071.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Fragaria vesca subsp. vesca]) HSP 1 Score: 197.2 bits (500), Expect = 2.7e-47 Identity = 115/184 (62.50%), Postives = 137/184 (74.46%), Query Frame = 1
BLAST of CmaCh17G000980 vs. NCBI nr
Match: gi|728819183|gb|KHG03086.1| (hypothetical protein F383_28364 [Gossypium arboreum]) HSP 1 Score: 189.5 bits (480), Expect = 5.6e-45 Identity = 109/171 (63.74%), Postives = 126/171 (73.68%), Query Frame = 1
BLAST of CmaCh17G000980 vs. NCBI nr
Match: gi|596296202|ref|XP_007227133.1| (hypothetical protein PRUPE_ppa026075mg [Prunus persica]) HSP 1 Score: 186.8 bits (473), Expect = 3.6e-44 Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |