CmaCh08G010210 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACGCTTTTTCTCTCCCACTCCTTCCTCCTCCTTCTCATCGGAACCACCACCACCTCCGCCGTTTCCAGCGAGTTTTGGTGCGTGGCTCGCAGCGACGTCAGCTACGAGGCGCTACAGACGGCGCTGAACTACGCCTGCGCCACCGGCGCAGATTGCACTCCTATTCTGCCGAACGGCATGTGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTAACTTCGCCGGCTCCGCCACCATTGCCCACTCCAACCCCAGTCCGTCCCCTTCCATTTCTTTTTATTTTTATTTTTATGGAAATTAGATTTTTTTTTAGTTCTAACAAATATATATATAATTATTTTGAGGTTTAATTATGTGACAATGTTTGTTTTGTGCAGGCTATGGATCTTGTGTTTATCCATCTTCTATCAGGTAATGCTAAATTTTGTTTCAATTTTTTAAATGAAATATTAGGTTTATTTATTTATTTATATTATTATAATTTATTCTAATTATTGCTGGACATTTCTTCATGTTCAAGTAAATGGGTTCTCTTATCCCATTACTGGGAGAATATTTTATTTTCTTTATTTTAAATTTTAAACATTTCCTGAAAATATAATTAAAAAATAAAATTATAATGGAGAGTTTCATTATAAAAATCTTGAACTTAGATTAAAATTTTAGTGCCCCTAAAGTTTAAAAAATATATAATAATTCTTTTCATTTTTACAAATTTTAATATAATTTAAATGATAATTGAAATTATAATTTTGAATTTAATATTTTTTTTACATAAAAAGTAATTGATATATTAGCTCTATTAGCTGTAAAATTATATTTTCGTTCAATATGTCTTTAAAATTTTATGTTTGTGTTTAGAATCCTAAAAAGAATATTAAATGGTGTCGAACATTTAATTTTTATTTAGATATAAAATTTAAAAATATATTAGATATTTTTAAAACTAAATTAAAACGAATTCTTAATAATTTAAATAGGGTGAAATATATATATATATAATATTTTAAAAATCGAATATTTTATTTCTTGTCCGAAGTATTTTTTGCGGGCCTCATCTTAATCAGAGACGGTTGGATCAGTCACGCTGGGGCCCAGGTGGCGGTGAGATCCAACGGTTAGAATAGCATGGATTTACTTTTATAATTTTAAATTAGCTTTTTTACTTAAAAACGCTGCGTTTTGAGAATCTAGAAGGCTGGTCAAGAATAGTATTGATTTAAATTAAACTTGTCGGAGAAAAGTCTTTTAAAATAATTAAATAGAAAAAATATATATTTAAATTACAATTTTAGTTTAATTTTAATTTTTTTTTTTATCAAATCTAAACCTTAAAAAATATCTATTAATTTTTTAAAATTTTAATTTGACATAAAATAAAATTTAGACAGTTTTTAATTTTATATTTAATTAATATTTATTTTGTATTCCATCTCAAATTAAAAATTTAGAGTTTAATTAGACATTAGTTTATATTTAATAAATATTCTATTTTTTTAAATATTATTTTTTATTAAATTAAAAAAAAAAAGAATAAGAATTATAGATTGAGTGACATAATAGAAGATGGTGTTGGGTTGTCCTAAAGAATCTATTCTTTGATATCATTATGTGGTTAGAACTTGTCCAAATCTTTAGCGATTTTCCGACTTTTCTTTTCAAATTTGTCTTATACAAAGAAAACGTTCATCGAAAATAAGAATGAATAGATGTATTGAGTTGTTCTGAAGATCATTTATGATGATTTTTCCAGTACTGCAGGAGGAGCAATCACACCGAGCTTTCCAGGAAACACTAGCCCGACAATAACAACACCAACCACAACCACCACCACGCCAAGCTTCAACAACGGTGGTACTGATGACACGAATGGACTAAACCCAGTATACAACCCGACATCTACCAACTCGAAAGCCTCTTTGAGTCTTACGACCTCTAAACTTTGGATCATGATATTGTTGTCGATTGCTATCTCACTCGCTTTGTAA ATGGCCACGCTTTTTCTCTCCCACTCCTTCCTCCTCCTTCTCATCGGAACCACCACCACCTCCGCCGTTTCCAGCGAGTTTTGGTGCGTGGCTCGCAGCGACGTCAGCTACGAGGCGCTACAGACGGCGCTGAACTACGCCTGCGCCACCGGCGCAGATTGCACTCCTATTCTGCCGAACGGCATGTGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTAACTTCGCCGGCTCCGCCACCATTGCCCACTCCAACCCCAGCTATGGATCTTGTGTTTATCCATCTTCTATCAGTACTGCAGGAGGAGCAATCACACCGAGCTTTCCAGGAAACACTAGCCCGACAATAACAACACCAACCACAACCACCACCACGCCAAGCTTCAACAACGGTGGTACTGATGACACGAATGGACTAAACCCAGTATACAACCCGACATCTACCAACTCGAAAGCCTCTTTGAGTCTTACGACCTCTAAACTTTGGATCATGATATTGTTGTCGATTGCTATCTCACTCGCTTTGTAA ATGGCCACGCTTTTTCTCTCCCACTCCTTCCTCCTCCTTCTCATCGGAACCACCACCACCTCCGCCGTTTCCAGCGAGTTTTGGTGCGTGGCTCGCAGCGACGTCAGCTACGAGGCGCTACAGACGGCGCTGAACTACGCCTGCGCCACCGGCGCAGATTGCACTCCTATTCTGCCGAACGGCATGTGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTAACTTCGCCGGCTCCGCCACCATTGCCCACTCCAACCCCAGCTATGGATCTTGTGTTTATCCATCTTCTATCAGTACTGCAGGAGGAGCAATCACACCGAGCTTTCCAGGAAACACTAGCCCGACAATAACAACACCAACCACAACCACCACCACGCCAAGCTTCAACAACGGTGGTACTGATGACACGAATGGACTAAACCCAGTATACAACCCGACATCTACCAACTCGAAAGCCTCTTTGAGTCTTACGACCTCTAAACTTTGGATCATGATATTGTTGTCGATTGCTATCTCACTCGCTTTGTAA MATLFLSHSFLLLLIGTTTTSAVSSEFWCVARSDVSYEALQTALNYACATGADCTPILPNGMCFLPNTIQAHASYAFNSFFQRKAMAPGSCNFAGSATIAHSNPSYGSCVYPSSISTAGGAITPSFPGNTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPTSTNSKASLSLTTSKLWIMILLSIAISLAL
BLAST of CmaCh08G010210 vs. Swiss-Prot
Match: PDCB1_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=PDCB1 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.2e-25 Identity = 85/201 (42.29%), Postives = 115/201 (57.21%), Query Frame = 1
BLAST of CmaCh08G010210 vs. Swiss-Prot
Match: PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.7e-23 Identity = 70/173 (40.46%), Postives = 95/173 (54.91%), Query Frame = 1
BLAST of CmaCh08G010210 vs. Swiss-Prot
Match: PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.9e-22 Identity = 70/184 (38.04%), Postives = 103/184 (55.98%), Query Frame = 1
BLAST of CmaCh08G010210 vs. Swiss-Prot
Match: ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18 Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 1
BLAST of CmaCh08G010210 vs. Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17 Identity = 41/100 (41.00%), Postives = 67/100 (67.00%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TrEMBL
Match: A0A0A0LND4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139290 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.8e-64 Identity = 146/202 (72.28%), Postives = 161/202 (79.70%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TrEMBL
Match: A0A0D2T8S3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156800 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42 Identity = 107/189 (56.61%), Postives = 138/189 (73.02%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TrEMBL
Match: A0A0B0MVW3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28364 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.3e-42 Identity = 109/195 (55.90%), Postives = 140/195 (71.79%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TrEMBL
Match: A0A067KWK7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01120 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 5.1e-42 Identity = 107/194 (55.15%), Postives = 138/194 (71.13%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TrEMBL
Match: V4S5T2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005883mg PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40 Identity = 102/183 (55.74%), Postives = 125/183 (68.31%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TAIR10
Match: AT4G13600.1 (AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 169.1 bits (427), Expect = 2.7e-42 Identity = 107/199 (53.77%), Postives = 132/199 (66.33%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TAIR10
Match: AT5G61130.1 (AT5G61130.1 plasmodesmata callose-binding protein 1) HSP 1 Score: 115.2 bits (287), Expect = 4.6e-26 Identity = 85/201 (42.29%), Postives = 115/201 (57.21%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TAIR10
Match: AT5G08000.1 (AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 3) HSP 1 Score: 108.6 bits (270), Expect = 4.3e-24 Identity = 70/173 (40.46%), Postives = 95/173 (54.91%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TAIR10
Match: AT1G18650.1 (AT1G18650.1 plasmodesmata callose-binding protein 3) HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23 Identity = 70/184 (38.04%), Postives = 103/184 (55.98%), Query Frame = 1
BLAST of CmaCh08G010210 vs. TAIR10
Match: AT1G13830.1 (AT1G13830.1 Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21 Identity = 76/186 (40.86%), Postives = 103/186 (55.38%), Query Frame = 1
BLAST of CmaCh08G010210 vs. NCBI nr
Match: gi|659114812|ref|XP_008457240.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 2 [Cucumis melo]) HSP 1 Score: 256.5 bits (654), Expect = 3.6e-65 Identity = 149/204 (73.04%), Postives = 162/204 (79.41%), Query Frame = 1
BLAST of CmaCh08G010210 vs. NCBI nr
Match: gi|778668447|ref|XP_004138961.2| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]) HSP 1 Score: 253.1 bits (645), Expect = 4.0e-64 Identity = 146/202 (72.28%), Postives = 161/202 (79.70%), Query Frame = 1
BLAST of CmaCh08G010210 vs. NCBI nr
Match: gi|823249382|ref|XP_012457328.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Gossypium raimondii]) HSP 1 Score: 181.0 bits (458), Expect = 1.9e-42 Identity = 107/189 (56.61%), Postives = 138/189 (73.02%), Query Frame = 1
BLAST of CmaCh08G010210 vs. NCBI nr
Match: gi|763805135|gb|KJB72073.1| (hypothetical protein B456_011G156800 [Gossypium raimondii]) HSP 1 Score: 181.0 bits (458), Expect = 1.9e-42 Identity = 107/189 (56.61%), Postives = 138/189 (73.02%), Query Frame = 1
BLAST of CmaCh08G010210 vs. NCBI nr
Match: gi|728819183|gb|KHG03086.1| (hypothetical protein F383_28364 [Gossypium arboreum]) HSP 1 Score: 180.3 bits (456), Expect = 3.3e-42 Identity = 109/195 (55.90%), Postives = 140/195 (71.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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