Cp4.1LG17g03320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g03320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlucan endo-1,3-beta-glucosidase 1
LocationCp4.1LG17 : 1680845 .. 1682861 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATTCTGTCCCGAACCCTTCTTTCTGCCCTCTTCCCCAATGGCCACGCTTTTTCTCTACCACTCCTTCCTCCTCCTTCTCATCGGAACCACCACCACCACCTCCGCCGTTTCCAGCGAGTATTGGTGCGTGGCTCGCAGCGACGTCAGCGACGAGGCGCTACAGACGGCGCTGAACTATGCCTGCGCCACCGGCGCCGATTGCACTCCTATTCTGCCGAACGGCCTATGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTAACTTCGCCGGCTCCGCCACCATCGCCCACTCCAACCCCANTTTTTTTTTTATGGAAATTAGATTTTTTTTTAATTCTAACAAAAAAAAAATATATATATATATATATATATATATAAAATAATGTTTATTTTGATTAATTTAAGGTTAAACTTTAGGTTTAATTATGTGACATTGTTTGTTTTGTGCAGGTTATGGATCTTGTGTTTATCCATCTTCAATCAGGTAATGCTAATTTTTTTTTCAATTTTTAAAATGAAATATTAGGTTTTATTTATTTATTTATATTATTATAATTTATTTAAAATATGCATTACAAAAACTACCCTTTATTTTATTCTAATTATTGCTGGAGATTTCTTCATGTTCAAGTAAATGGGTTTGGAGAATATTTTATTTTCTTTATTTTTAAATTTTAAACATTTCTTTAAAATATAATTAAAAAATAAAATTATAATGGAGGGTTTCATTATAAAAATCTTGAACTTAAATTAAAATTTTAGTGCCCCTAAATTTTAAAAAATGTATAATAATTCTTTTAATTTTTATAAATTTTAATATTGTTTAAATGATAAATGAAATTATAATTTTGAGTTTAATATTTTTTTTTTTTTTTACATAAAAAGTAGAATCCTAAAAAGAATATTAAATGGGGTCGAACATTTAATTTTTATTTAGATATAAAATTTAAAATTCAAAATTTTAAAATATATTAGATATTTTTTTAAAAACTAAATTAAAACGAATTCTTAATAATTTAAATAGGGTGATATATATATATATATAATATTTTAAAAATCGAATATTTTATTTCTTGTCCAAAGTATTTTTAGTGGGCCTCATCTTAATTAGAGACGGTTGGATCAGTCACGCTGGGGCCCAGGTGGCGGTGAGATCCAACGGTTAGAATAGCATGGATTTACTTTTATAATTTTAAATTAGCTTTTTGACTAAAACGCTGCGTTTTGAGAATCTAGAAGGCTGGTCAAGAATAGTATTGACTTAAATTAAACTTGTCGGAGCAAAGTCTGAAAATAATTAAATAGAAAAAAAATATATTTAAATTACAATTTTAGTTTTTTTTTATCATTAAAAAAATATCTATTAATTTTTTAAAATTTTAATTTCACGTAAAATAAAAGTTAGACCGTTTTTAATTTTATATTTAATTAATATTTATTTTATATTCGATCTAAAATTAAAAATTTAGAGTTTAATTAGACATTAATTTATGTAATAAATATTCGATTTTTTAAATATTATTTTTTATTAAAAAAAAGGAATAAGAATGATAGATGGAGTGATGTTGGGTTGTCCCTAAAGAATCAATTCTTTGATATCATCTTGTCGTAAGAACTTGTCCGACATTTCTTTTCAAATTTGTCTTATTCAAAGAAAACGTTCATCGAGAATAAGAATGAATCGATGTATTGAGTTGTTCTAAAGATCATTTATGATGATTTTTCAGTACTGCAGGAGGAGCAATCACACCGAGCCCTCCAGGAAACACTAGCCCGACAATAACAACACCAACCACAACCACCACCACGCCAAGCTTCAACAACGGTGGTACCGATGACACGAATGGACTAAACCCAGTATACAACCCGACATCTACCAACTCGAAAGCCTCTTCGAGTCTTACGACCTCTAAACTCTTGATCTTGATATGGTTGTCGATTGCTATCTCACTCGCTTCGTAA

mRNA sequence

ACATTCTGTCCCGAACCCTTCTTTCTGCCCTCTTCCCCAATGGCCACGCTTTTTCTCTACCACTCCTTCCTCCTCCTTCTCATCGGAACCACCACCACCACCTCCGCCGTTTCCAGCGAGTATTGGTGCGTGGCTCGCAGCGACGTCAGCGACGAGGCGCTACAGACGGCGCTGAACTATGCCTGCGCCACCGGCGCCGATTGCACTCCTATTCTGCCGAACGGCCTATGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTACTGCAGGAGGAGCAATCACACCGAGCCCTCCAGGAAACACTAGCCCGACAATAACAACACCAACCACAACCACCACCACGCCAAGCTTCAACAACGGTGGTACCGATGACACGAATGGACTAAACCCAGTATACAACCCGACATCTACCAACTCGAAAGCCTCTTCGAGTCTTACGACCTCTAAACTCTTGATCTTGATATGGTTGTCGATTGCTATCTCACTCGCTTCGTAA

Coding sequence (CDS)

ACATTCTGTCCCGAACCCTTCTTTCTGCCCTCTTCCCCAATGGCCACGCTTTTTCTCTACCACTCCTTCCTCCTCCTTCTCATCGGAACCACCACCACCACCTCCGCCGTTTCCAGCGAGTATTGGTGCGTGGCTCGCAGCGACGTCAGCGACGAGGCGCTACAGACGGCGCTGAACTATGCCTGCGCCACCGGCGCCGATTGCACTCCTATTCTGCCGAACGGCCTATGCTTCCTCCCCAACACCATCCAGGCCCACGCCTCCTACGCCTTCAACAGCTTCTTCCAGCGCAAGGCCATGGCTCCTGGCTCCTGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTACTGCAGGAGGAGCAATCACACCGAGCCCTCCAGGAAACACTAGCCCGACAATAACAACACCAACCACAACCACCACCACGCCAAGCTTCAACAACGGTGGTACCGATGACACGAATGGACTAAACCCAGTATACAACCCGACATCTACCAACTCGAAAGCCTCTTCGAGTCTTACGACCTCTAAACTCTTGATCTTGATATGGTTGTCGATTGCTATCTCACTCGCTTCGTAA

Protein sequence

TFCPEPFFLPSSPMATLFLYHSFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCYGSCVYPSSISTAGGAITPSPPGNTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPTSTNSKASSSLTTSKLLILIWLSIAISLAS
Homology
[Close]
BLAST of Cp4.1LG17g03320 vs. Swiss-Prot
Match: PDCB1_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-18
Identity = 68/178 (38.20%), Postives = 93/178 (52.25%), Query Frame = 1 

Query: 38  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQR 97
           SS  WCV ++ +SD  LQ  L+YAC  GADC P  P   CF P+ +++H +YA NSFFQ+
Sbjct: 17  SSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQK 76

Query: 98  KAMAPGSC--------------YGSCVYPSSISTAGGAITPSPPGNTSP-----TITTPT 157
           K  +PGSC              Y  C +P+S S + G+ T + PG T+P     T T P 
Sbjct: 77  KGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVT-PGTTNPKGSPTTTTLPG 136

Query: 158 TTTTTPSFNN-----------GGTDDTNGLNPVYNPTSTNSKASSSLTTSKLLILIWL 186
           + T +P   N           GGT  T G+NP Y   +T+S A +   +SKL I + L
Sbjct: 137 SGTNSPYSGNPTNGVFGGNSTGGTTGT-GINPDY---TTDSSAFALKNSSKLFICLLL 189

[Close]
BLAST of Cp4.1LG17g03320 vs. Swiss-Prot
Match: PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 60/153 (39.22%), Postives = 79/153 (51.63%), Query Frame = 1 

Query: 38  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQR 97
           SS  WCV +  +S+  LQ  L+YAC  GADC PI   G CF PNT+++H SYA NSFFQ+
Sbjct: 17  SSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTVKSHCSYAVNSFFQK 76

Query: 98  KAMAPGSC--------------YGSCVYPSSISTAGGAITPSPPGNTSPTITTPTTTTTT 157
           K  + G+C              Y +C +P+S S +G     + P  T+P+   PTTT T 
Sbjct: 77  KGQSLGTCDFAGTATFSASDPSYTTCPFPASASGSG----TTTPVTTTPSTRVPTTTNTR 136

Query: 158 P----SFNNGGTDDTNGLNPVYNPTSTNSKASS 173
           P        GG    +G+NP Y   S   K  S
Sbjct: 137 PYTITPSTGGGLGIPSGINPDYTDPSFGFKLQS 165

[Close]
BLAST of Cp4.1LG17g03320 vs. Swiss-Prot
Match: PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.4e-13
Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 1 

Query: 14  MATLFLYHSFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILP 73
           MA L LY   L LL+   T+ S      WCV ++ +SD  LQ  L+YAC  GADC P  P
Sbjct: 1   MAPLVLY--LLTLLMAGHTSAS------WCVCKTGLSDSVLQKTLDYACGNGADCNPTHP 60

Query: 74  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCY---GSCVYPSSISTAGGAITPSPPGNT 133
            G CF P+ ++AH +YA NSFFQ+K  A  SC     + +  +  S  G A   S  G++
Sbjct: 61  KGSCFNPDNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSS 120

Query: 134 SPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPTST 167
               TT T    +P  +N  T    G +P     ST
Sbjct: 121 GSGSTTVTPGKNSPKGSNSITTFPGGNSPYSGTPST 148

[Close]
BLAST of Cp4.1LG17g03320 vs. Swiss-Prot
Match: ALL9_OLEEU (Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.1e-12
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 1 

Query: 31  TTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYA 90
           T T +  ++  WCV +  VSD+ L   +NYAC  G DC PI P G CF PNT++AHA+Y 
Sbjct: 361 TPTPTPKAAGSWCVPKPGVSDDQLTGNINYACGQGIDCGPIQPGGACFEPNTVKAHAAYV 420

Query: 91  FNSFFQRKAMAPGSC 106
            N ++Q       +C
Sbjct: 421 MNLYYQSAGRNSWNC 435

[Close]
BLAST of Cp4.1LG17g03320 vs. Swiss-Prot
Match: ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.0e-12
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 1 

Query: 42  WCVARSDVSDEALQTALNYACA-TGADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAM 101
           WCV +++ +D  LQ+ ++Y C+ +G DC PI  NG CF PNT++AHASYA NS++Q K  
Sbjct: 37  WCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSKGR 96

Query: 102 APGSCYGSCVYPSSISTAGGAITPSPPGNTS 132
               C  S           GAIT S P N S
Sbjct: 97  NDFDCDFS---------GTGAITSSDPSNGS 118

[Close]
BLAST of Cp4.1LG17g03320 vs. TrEMBL
Match: A0A0A0LND4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139290 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.3e-55
Identity = 133/197 (67.51%), Postives = 143/197 (72.59%), Query Frame = 1 

Query: 14  MATLFLYH-SFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPIL 73
           MAT  L H SF          TS V   YWCVARSD + E+LQ AL+YACATGA+CTPI+
Sbjct: 1   MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 60

Query: 74  PNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTA 133
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC              YGSCVYPSS+S+A
Sbjct: 61  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLSSA 120

Query: 134 GGAITPSPPGNTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPTS----TNSKASSSL 192
           GGAITPSPP N SPTIT P   T TP+FNNGGT DTNGLNP YNPTS    TNS+AS S 
Sbjct: 121 GGAITPSPPANASPTITVP--GTATPNFNNGGTSDTNGLNPDYNPTSTSNPTNSEASLSS 180

[Close]
BLAST of Cp4.1LG17g03320 vs. TrEMBL
Match: V4S5T2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005883mg PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-35
Identity = 97/186 (52.15%), Postives = 117/186 (62.90%), Query Frame = 1 

Query: 24  LLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTI 83
           +L ++          +  WCVARSD S++ LQTAL+YAC TGADCTPI PNGLC+LPNTI
Sbjct: 23  MLNVMAANVPVEGTGNSTWCVARSDASNQVLQTALDYACGTGADCTPIQPNGLCYLPNTI 82

Query: 84  QAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTAGGAIT-PSPPG 143
           QAHASYAFNS+FQRK MAPGSC              YGSC+YPSS+STAGG  T  S P 
Sbjct: 83  QAHASYAFNSYFQRKGMAPGSCDFSGTATIAKTDPSYGSCMYPSSLSTAGGTPTQSSTPT 142

Query: 144 NTSPTITTPTTTTTTPSFNNGGTDDTN-GLNPVYNPTSTNSKASSSLTTSKLLILIWLSI 194
            T+ T   PTT  TT   NN G +  N G+ P   PT+ +SKASS     KL+  +  S+
Sbjct: 143 TTTTTNPNPTTPATTAPLNNDGGNGANPGMGPPM-PTTDDSKASSKFIAMKLITYVSSSL 202

[Close]
BLAST of Cp4.1LG17g03320 vs. TrEMBL
Match: A0A067KWK7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01120 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-35
Identity = 98/186 (52.69%), Postives = 125/186 (67.20%), Query Frame = 1 

Query: 23  FLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNT 82
           F++++     TT  ++   WCVARSD S++ALQTAL+YAC+TGADC+P+  NGLCFLPNT
Sbjct: 13  FIIVITLGNITTLPLAEGNWCVARSDASNQALQTALDYACSTGADCSPLQSNGLCFLPNT 72

Query: 83  IQAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTA-GGAITPSPP 142
           IQAHASYAFNS+FQRK+MAPGSC              YGSCVYPSS+STA GGA TP+  
Sbjct: 73  IQAHASYAFNSYFQRKSMAPGSCDFSGTATIARTDPSYGSCVYPSSLSTAGGGATTPTST 132

Query: 143 GNTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPT--STNSKASSSLTTSKLLILIWL 192
              +P   TPT   TT   N GG   T GLNP   P+  + NSKAS+ L  +K+++ I +
Sbjct: 133 STNNP--NTPTPPMTTSPVNGGG---TVGLNPGMTPSLPTDNSKASTGLMAAKVIMPISI 192

[Close]
BLAST of Cp4.1LG17g03320 vs. TrEMBL
Match: A0A0B0MVW3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28364 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34
Identity = 102/198 (51.52%), Postives = 129/198 (65.15%), Query Frame = 1 

Query: 14  MATLFLYHSFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILP 73
           +A L L   FL LL+   TT S      WCVARSD S++ALQTAL+YACA+GADCTP+  
Sbjct: 3   LAALKLPLFFLSLLL---TTFSVADGASWCVARSDASNQALQTALDYACASGADCTPLQS 62

Query: 74  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTAG 133
           +GLCFLPNTIQAHASYAFNS++QR+AMAPGSC              YGSC+YPSS STAG
Sbjct: 63  DGLCFLPNTIQAHASYAFNSYYQRRAMAPGSCDFAGTATVAKTDPSYGSCMYPSSPSTAG 122

Query: 134 GAITPSPPGNTSPTITTPTTTTTTPSFNNGGTDDTN--GLNPVYNPTSTNSKAS--SSLT 193
           G  TP+ P   +   T PTTTTT P    GG++  N  GL P + PT+  S+AS  S + 
Sbjct: 123 GLPTPTTPTTVTNNPTAPTTTTTAPLGGAGGSNGLNNPGLTPPF-PTTDESRASFDSIVN 182

[Close]
BLAST of Cp4.1LG17g03320 vs. TrEMBL
Match: A0A0D2T8S3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156800 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 103/207 (49.76%), Postives = 130/207 (62.80%), Query Frame = 1 

Query: 6   PFFLPSSPMATLFLYHSFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATG 65
           P  LP+  +   FL  S LL      TT S      WCVARSD S++ALQTAL+YACA+G
Sbjct: 110 PMALPALKLPLFFL--SLLL------TTFSVAEGASWCVARSDASNQALQTALDYACASG 169

Query: 66  ADCTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC--------------YGSCVY 125
           ADCTP+  +GLCFLPNTIQAHASYAFNS++QR+A+APGSC              YGSC+Y
Sbjct: 170 ADCTPLQSDGLCFLPNTIQAHASYAFNSYYQRRAIAPGSCDFAGTATVAKTDPSYGSCMY 229

Query: 126 PSSISTAGGAITPSPPGNTSPTITTPTTTTTTPSFNNGGTDDTNGLN-----PVYNPTST 185
           PSS+STAGG  TP+ P   +   T PTTTTT P    GG D +NGLN     P + PT+ 
Sbjct: 230 PSSLSTAGGLPTPTTPTTVTNNPTAPTTTTTAPL---GGADGSNGLNNPGLTPPF-PTTD 289

Query: 186 NSKAS----SSLTTSKLLILIWLSIAI 190
            S+AS     + ++  L++L+ LS  +
Sbjct: 290 ESRASFDCMVNTSSMSLMLLVVLSFIL 304

[Close]
BLAST of Cp4.1LG17g03320 vs. TAIR10
Match: AT4G13600.1 (AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-35
Identity = 100/201 (49.75%), Postives = 119/201 (59.20%), Query Frame = 1 

Query: 13  PMATLFLYHSFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPIL 72
           PMA      SFLLLL+  +      S+  WCVAR DV+ +ALQ AL+YACA GADC PI 
Sbjct: 38  PMALCLQTLSFLLLLLFRS------SAAMWCVARFDVTSQALQAALDYACAAGADCAPIQ 97

Query: 73  PNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTA 132
           PNGLCFLPNT+QAHASYAFNS+FQR AMAPGSC              YGSCVYP+S+  A
Sbjct: 98  PNGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYPNSVRNA 157

Query: 133 GGAI-------TPSPP-GNTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPTSTNSKA 192
           GG+        TPS   GN+  T   P + TTT  F  GG     GLNP    T+TN+  
Sbjct: 158 GGSASTTTVGGTPSTTVGNSPMTTLRPPSGTTTSPFGIGG----GGLNPQGTTTTTNTDE 217

[Close]
BLAST of Cp4.1LG17g03320 vs. TAIR10
Match: AT1G13830.1 (AT1G13830.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 6.5e-20
Identity = 73/189 (38.62%), Postives = 97/189 (51.32%), Query Frame = 1 

Query: 24  LLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTI 83
           LLLL+  T ++SA+    +C+ +  + D  LQT+++YAC T ADC PI   G C+ P+TI
Sbjct: 7   LLLLLSLTNSSSAI----YCLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPDTI 66

Query: 84  QAHASYAFNSFFQRKAMAPGSCYGS----------------CVYPSSISTAGGAITPSPP 143
           ++H  +A NS+FQ  A  PGSC  S                C+YPSS S+     T SPP
Sbjct: 67  KSHCDWAVNSYFQNAAQVPGSCNFSGTATTNPNPPSNLANGCIYPSSPSS-----TRSPP 126

Query: 144 GNTSPTITTPTTTTTT------PSFNNGGTDDTNGLNPVYNPTSTNSKASSSLTTS---- 185
             T PT TTPT  TT       P     GT    G   V+NP++  S ASS  T+S    
Sbjct: 127 STTPPTGTTPTNGTTPFPGTPFPGTPFPGTPPVFGPTGVFNPSNPGSGASSLGTSSVFTL 186

[Close]
BLAST of Cp4.1LG17g03320 vs. TAIR10
Match: AT5G61130.1 (AT5G61130.1 plasmodesmata callose-binding protein 1)

HSP 1 Score: 94.4 bits (233), Expect = 8.4e-20
Identity = 68/178 (38.20%), Postives = 93/178 (52.25%), Query Frame = 1 

Query: 38  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQR 97
           SS  WCV ++ +SD  LQ  L+YAC  GADC P  P   CF P+ +++H +YA NSFFQ+
Sbjct: 17  SSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQK 76

Query: 98  KAMAPGSC--------------YGSCVYPSSISTAGGAITPSPPGNTSP-----TITTPT 157
           K  +PGSC              Y  C +P+S S + G+ T + PG T+P     T T P 
Sbjct: 77  KGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVT-PGTTNPKGSPTTTTLPG 136

Query: 158 TTTTTPSFNN-----------GGTDDTNGLNPVYNPTSTNSKASSSLTTSKLLILIWL 186
           + T +P   N           GGT  T G+NP Y   +T+S A +   +SKL I + L
Sbjct: 137 SGTNSPYSGNPTNGVFGGNSTGGTTGT-GINPDY---TTDSSAFALKNSSKLFICLLL 189

[Close]
BLAST of Cp4.1LG17g03320 vs. TAIR10
Match: AT1G18650.1 (AT1G18650.1 plasmodesmata callose-binding protein 3)

HSP 1 Score: 91.3 bits (225), Expect = 7.1e-19
Identity = 60/153 (39.22%), Postives = 79/153 (51.63%), Query Frame = 1 

Query: 38  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQR 97
           SS  WCV +  +S+  LQ  L+YAC  GADC PI   G CF PNT+++H SYA NSFFQ+
Sbjct: 17  SSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTVKSHCSYAVNSFFQK 76

Query: 98  KAMAPGSC--------------YGSCVYPSSISTAGGAITPSPPGNTSPTITTPTTTTTT 157
           K  + G+C              Y +C +P+S S +G     + P  T+P+   PTTT T 
Sbjct: 77  KGQSLGTCDFAGTATFSASDPSYTTCPFPASASGSG----TTTPVTTTPSTRVPTTTNTR 136

Query: 158 P----SFNNGGTDDTNGLNPVYNPTSTNSKASS 173
           P        GG    +G+NP Y   S   K  S
Sbjct: 137 PYTITPSTGGGLGIPSGINPDYTDPSFGFKLQS 165

[Close]
BLAST of Cp4.1LG17g03320 vs. TAIR10
Match: AT1G79480.1 (AT1G79480.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.6e-18
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 1 

Query: 38  SSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTIQAHASYAFNSFFQR 97
           +S YWCVA+  V D  +Q A+N+AC +GADC  I PNG CF PNT+ AHAS+A+NS++QR
Sbjct: 307 TSAYWCVAKPSVPDPIIQEAMNFACGSGADCHSIQPNGPCFKPNTLWAHASFAYNSYWQR 366

Query: 98  KAMAPGSC 106
                GSC
Sbjct: 367 TKSTGGSC 374

[Close]
BLAST of Cp4.1LG17g03320 vs. NCBI nr
Match: gi|659114812|ref|XP_008457240.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 2 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 141/202 (69.80%), Postives = 151/202 (74.75%), Query Frame = 1 

Query: 8   FLPSSPMATLFLYHSFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGAD 67
           FLPS   +  F    FL  LIGT    SAV   YWCVARSD + E+LQ A++YACATGAD
Sbjct: 4   FLPSHYYS--FFLFFFLFFLIGT----SAVDGAYWCVARSDATYESLQAAIDYACATGAD 63

Query: 68  CTPILPNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPS 127
           CTPIL NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC              YGSCVYPS
Sbjct: 64  CTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFGGSATIAQSDPSYGSCVYPS 123

Query: 128 SISTAGGAITPSPPGNTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPTS----TNSK 187
           S+S+AGGAITPSPP NTSPTIT P   T TPSFNNGGT DTNG+NPVYNPTS    TNS+
Sbjct: 124 SLSSAGGAITPSPPANTSPTITVP--GTATPSFNNGGTGDTNGVNPVYNPTSTSNPTNSE 183

Query: 188 ASSSLTTSKLLILIWLSIAISL 192
           ASSS TT KL+ILI  SIAISL
Sbjct: 184 ASSSFTTPKLVILILFSIAISL 197

[Close]
BLAST of Cp4.1LG17g03320 vs. NCBI nr
Match: gi|778668447|ref|XP_004138961.2| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 7.6e-55
Identity = 133/197 (67.51%), Postives = 143/197 (72.59%), Query Frame = 1 

Query: 14  MATLFLYH-SFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPIL 73
           MAT  L H SF          TS V   YWCVARSD + E+LQ AL+YACATGA+CTPI+
Sbjct: 1   MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 60

Query: 74  PNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTA 133
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSC              YGSCVYPSS+S+A
Sbjct: 61  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLSSA 120

Query: 134 GGAITPSPPGNTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYNPTS----TNSKASSSL 192
           GGAITPSPP N SPTIT P   T TP+FNNGGT DTNGLNP YNPTS    TNS+AS S 
Sbjct: 121 GGAITPSPPANASPTITVP--GTATPNFNNGGTSDTNGLNPDYNPTSTSNPTNSEASLSS 180

[Close]
BLAST of Cp4.1LG17g03320 vs. NCBI nr
Match: gi|568880275|ref|XP_006493056.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Citrus sinensis])

HSP 1 Score: 159.5 bits (402), Expect = 6.1e-36
Identity = 99/188 (52.66%), Postives = 118/188 (62.77%), Query Frame = 1 

Query: 24  LLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTI 83
           +L ++          +  WCVARSD S++ALQTAL+YAC TGADCTPI PNGLC+LPNTI
Sbjct: 23  MLNVMAANVPVEGTGNSTWCVARSDASNQALQTALDYACGTGADCTPIQPNGLCYLPNTI 82

Query: 84  QAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTAGGAIT-PSPPG 143
           QAHASYAFNS+FQRK MAPGSC              YGSC+YPSS+STAGG  T  S P 
Sbjct: 83  QAHASYAFNSYFQRKGMAPGSCDFSGTATIAKTDPSYGSCMYPSSLSTAGGTPTQSSTPT 142

Query: 144 NTSPTITTPTTTTTTPSFNNGGTDDTNGLNPVYN---PTSTNSKASSSLTTSKLLILIWL 194
            T+ T   PTT  TT   NN   D  NG+NP      PT+ +SKASS     KL+  +  
Sbjct: 143 TTTTTNPNPTTPATTAPLNN---DGGNGVNPGMGPPMPTTDDSKASSKFIAMKLITYVSS 202

[Close]
BLAST of Cp4.1LG17g03320 vs. NCBI nr
Match: gi|567855611|ref|XP_006420925.1| (hypothetical protein CICLE_v10005883mg [Citrus clementina])

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-35
Identity = 97/186 (52.15%), Postives = 117/186 (62.90%), Query Frame = 1 

Query: 24  LLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNGLCFLPNTI 83
           +L ++          +  WCVARSD S++ LQTAL+YAC TGADCTPI PNGLC+LPNTI
Sbjct: 23  MLNVMAANVPVEGTGNSTWCVARSDASNQVLQTALDYACGTGADCTPIQPNGLCYLPNTI 82

Query: 84  QAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTAGGAIT-PSPPG 143
           QAHASYAFNS+FQRK MAPGSC              YGSC+YPSS+STAGG  T  S P 
Sbjct: 83  QAHASYAFNSYFQRKGMAPGSCDFSGTATIAKTDPSYGSCMYPSSLSTAGGTPTQSSTPT 142

Query: 144 NTSPTITTPTTTTTTPSFNNGGTDDTN-GLNPVYNPTSTNSKASSSLTTSKLLILIWLSI 194
            T+ T   PTT  TT   NN G +  N G+ P   PT+ +SKASS     KL+  +  S+
Sbjct: 143 TTTTTNPNPTTPATTAPLNNDGGNGANPGMGPPM-PTTDDSKASSKFIAMKLITYVSSSL 202

[Close]
BLAST of Cp4.1LG17g03320 vs. NCBI nr
Match: gi|470124133|ref|XP_004298071.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-35
Identity = 96/178 (53.93%), Postives = 115/178 (64.61%), Query Frame = 1 

Query: 16  TLFLYHSFLLLLIGTTTTTSAVSSEYWCVARSDVSDEALQTALNYACATGADCTPILPNG 75
           +LFL+   L  L+   TT    ++  WCVARSD S++ALQTAL+YACA+GADC PI  +G
Sbjct: 7   SLFLFFLLLTTLVCINTTGVEGATTTWCVARSDASNQALQTALDYACASGADCVPIQSDG 66

Query: 76  LCFLPNTIQAHASYAFNSFFQRKAMAPGSC--------------YGSCVYPSSISTAGGA 135
           LC+LPNTIQAH SYAFNS++QRKAMAPGSC              YGSCVYPSS+STAGG 
Sbjct: 67  LCYLPNTIQAHTSYAFNSYYQRKAMAPGSCDFSGTATVAQTDPSYGSCVYPSSVSTAGGT 126

Query: 136 ITPSPPGNTSPTITT-----PTTTTTTPSFNNGGTDDTNGLNPVYNPTSTNSKASSSL 175
            T     NT+PT TT     PTTTTT P+F NG      GL PV  P   +   ++SL
Sbjct: 127 STTP---NTTPTTTTTIPSPPTTTTTNPTFGNG---VVGGLTPVTTPAVPDDSKAASL 178

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g03320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PDCB1_ARATH1.5e-1838.20PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=PDCB1 PE=1 SV... [more]
PDCB3_ARATH1.3e-1739.22PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV... [more]
PDCB2_ARATH9.4e-1337.82PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV... [more]
ALL9_OLEEU6.1e-1242.67Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1[more]
ALL10_OLEEU8.0e-1243.96Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1[more]
BLAST of Cp4.1LG17g03320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LND4_CUCSA5.3e-5567.51Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139290 PE=4 SV=1[more]
V4S5T2_9ROSI2.1e-3552.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005883mg PE=4 SV=1[more]
A0A067KWK7_JATCU4.7e-3552.69Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01120 PE=4 SV=1[more]
A0A0B0MVW3_GOSAR1.4e-3451.52Uncharacterized protein OS=Gossypium arboreum GN=F383_28364 PE=4 SV=1[more]
A0A0D2T8S3_GOSRA2.3e-3449.76Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156800 PE=4 SV=1[more]
BLAST of Cp4.1LG17g03320 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G13600.12.4e-3549.75 Carbohydrate-binding X8 domain superfamily protein[more]
AT1G13830.16.5e-2038.62 Carbohydrate-binding X8 domain superfamily protein[more]
AT5G61130.18.4e-2038.20 plasmodesmata callose-binding protein 1[more]
AT1G18650.17.1e-1939.22 plasmodesmata callose-binding protein 3[more]
AT1G79480.14.6e-1855.88 Carbohydrate-binding X8 domain superfamily protein[more]
BLAST of Cp4.1LG17g03320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114812|ref|XP_008457240.1|1.1e-5869.80PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 2 [Cucumis melo][more]
gi|778668447|ref|XP_004138961.2|7.6e-5567.51PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus][more]
gi|568880275|ref|XP_006493056.1|6.1e-3652.66PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Citrus sinensis][more]
gi|567855611|ref|XP_006420925.1|3.0e-3552.15hypothetical protein CICLE_v10005883mg [Citrus clementina][more]
gi|470124133|ref|XP_004298071.1|3.9e-3553.93PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012946X8
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0030247 polysaccharide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g03320.1Cp4.1LG17g03320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012946X8 domainPFAMPF07983X8coord: 42..106
score: 4.5
IPR012946X8 domainSMARTSM00768X8_clscoord: 41..111
score: 8.8
NoneNo IPR availablePANTHERPTHR32227FAMILY NOT NAMEDcoord: 42..171
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g03320Cucsa.193950Cucumber (Gy14) v1cgycpeB0547
Cp4.1LG17g03320CmaCh17G000980Cucurbita maxima (Rimu)cmacpeB388
Cp4.1LG17g03320CmaCh08G010210Cucurbita maxima (Rimu)cmacpeB916
Cp4.1LG17g03320CmoCh08G009910Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g03320CmoCh17G001010Cucurbita moschata (Rifu)cmocpeB351
Cp4.1LG17g03320Cla002962Watermelon (97103) v1cpewmB334
Cp4.1LG17g03320Csa2G139290Cucumber (Chinese Long) v2cpecuB305
Cp4.1LG17g03320MELO3C020446Melon (DHL92) v3.5.1cpemeB310
Cp4.1LG17g03320ClCG06G007840Watermelon (Charleston Gray)cpewcgB294
Cp4.1LG17g03320CSPI02G09160Wild cucumber (PI 183967)cpecpiB304
Cp4.1LG17g03320Lsi09G011390Bottle gourd (USVL1VR-Ls)cpelsiB254
Cp4.1LG17g03320MELO3C020446.2Melon (DHL92) v3.6.1cpemedB362
Cp4.1LG17g03320CsaV3_2G011570Cucumber (Chinese Long) v3cpecucB0375
Cp4.1LG17g03320Bhi12G001296Wax gourdcpewgoB0392
Cp4.1LG17g03320CsGy2G009410Cucumber (Gy14) v2cgybcpeB201
Cp4.1LG17g03320Carg11026Silver-seed gourdcarcpeB1503
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g03320Cp4.1LG12g00820Cucurbita pepo (Zucchini)cpecpeB169
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g03320Silver-seed gourdcarcpeB0323
Cp4.1LG17g03320Silver-seed gourdcarcpeB1096
Cp4.1LG17g03320Silver-seed gourdcarcpeB1330
Cp4.1LG17g03320Cucumber (Chinese Long) v3cpecucB0383
Cp4.1LG17g03320Cucumber (Chinese Long) v3cpecucB0385
Cp4.1LG17g03320Cucurbita pepo (Zucchini)cpecpeB167
Cp4.1LG17g03320Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG17g03320Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG17g03320Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG17g03320Cucumber (Gy14) v1cgycpeB0675
Cp4.1LG17g03320Cucurbita maxima (Rimu)cmacpeB631
Cp4.1LG17g03320Cucurbita moschata (Rifu)cmocpeB580
Cp4.1LG17g03320Cucurbita moschata (Rifu)cmocpeB777
Cp4.1LG17g03320Wild cucumber (PI 183967)cpecpiB310
Cp4.1LG17g03320Watermelon (Charleston Gray)cpewcgB293
Cp4.1LG17g03320Watermelon (Charleston Gray)cpewcgB306
Cp4.1LG17g03320Watermelon (97103) v1cpewmB331
Cp4.1LG17g03320Melon (DHL92) v3.5.1cpemeB316
Cp4.1LG17g03320Cucumber (Gy14) v2cgybcpeB352
Cp4.1LG17g03320Melon (DHL92) v3.6.1cpemedB371