CmaCh17G000980.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G000980.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Glucan endo--beta-glucosidase 4
Location	Cma_Chr17 : 480734 .. 482723 (+)
Sequence length	821

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCACTGCCATTCCGTCCCAATCCCTCTCTTCCTCTCCCTTTTCCTTTCCCGATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTCCGTCTCCTTTTTTTTTTATTAATTTTTTAGAAATAAATAAATAAATACATTATCGATAGATTTTTATTATTAATACTCTTGACATTGGTGTTCTATGCAGGTTATGGATCTTGTGTTTATCCATCTTCAATCAGGTACGCTAATTTTTTTTTTTTGTTTTTTCTTTCTATTTTAAAAATAAAATATTTTAATTTTCCAATTTATTAAAATGTGCATAGAAAAACCCTTTATCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATTTTGGTGGAGATTTCTTCATGTTCAAGTAAATGGGTTCACTTTTTAGAGTGTTATATTAATAATTAATTCTGAAAATCATATTTATTTGGCTTCTTTTCTTTTATTTCCCACTAATTTATTAATTTAAGATTCTTTTAAAAAATGTAATAAAATTTTCCGCCATTATTTTTAAAATTCTCGATTCTCTCGATATATATTTTTTTTCTAGCCAAGAAAATAGACATTTCTCTTTATTCTATCTTTTTGGTACAATTTTTTTACAGTATTTTGAAAATAAAAAATAACTTTTTTTTTTTTTTGCTAAAATAAACTATTTTCATTTTAAATTTAGGGGGAAAAGGGAATGTAGTAACTTCTTCTACATCTTTCTGTGGGGTTCATCTAGGTTAGACACCGTTGGATCAGTCTGGCTGGGGCCCAGTGAGTGGTCAGATCCAACGGTGAGGATGGCATGGATTTACTTTCAAATTGTAAATCAGCTTTTTCCTGAAACGGTGCGTTTTGGGGAGTCTTGAAAGCTGGTCAAGAATGGTACATGTCAGATTCTGGTTGGTCATGATTACTGCAGTTGTCAGACCCCAACCAGCCTTCTTTTTAAATAAATTCTTTTGTTTTAAAAAAAACAATTGTATTTTTAAAATAATTCAATAGAAAATAAAAATAAGCTAATGAAACAAATTTATTTCCATTTATATACCTTATTTTCGTAGTTTCATTTTTAGTCATTATTGCAAAATCAATAAAATTGATATATATATATATACATACACATGTATGTATAGATCAATCGGTCGCTCAAAATTTTTAAAATTTATATAAAGAGGAGAATAAGAATTATGTAACACAATATAGTACTCTAAATCTTGTGTTATTTGGGATGATTATCCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAGGAGGAGGGCTATGGAGGGTTCATTCAGTTTTGTTAGAAACAACATGTTCTTTTTGTGAAAACTAAATGACATAGGCAATATCAGTTAGGGTTTAGTTCAGCCTTCACAAATCTCCCTCTTTCTTCACAGGATTTGCTCATTGAATTCAATGCTTCAATTTCATTCTTCTAT

mRNA sequence

TTCCACTGCCATTCCGTCCCAATCCCTCTCTTCCTCTCCCTTTTCCTTTCCCGATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAGGAGGAGGGCTATGGAGGGTTCATTCAGTTTTGTTAGAAACAACATGTTCTTTTTGTGAAAACTAAATGACATAGGCAATATCAGTTAGGGTTTAGTTCAGCCTTCACAAATCTCCCTCTTTCTTCACAGGATTTGCTCATTGAATTCAATGCTTCAATTTCATTCTTCTAT

Coding sequence (CDS)

ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCCAACCTCCGCTGTCGACGGCGCGTACTGGTGCGTGGCCCGCAGCGAGGCGAGCTACGAAGCCCTTCAAACCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGCACTCCGCTTCTGTCGAACGGACTCTGCTTCCTCCCGAACACCATCCAGGCCCACGCCTCCTACGCTTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCCCCTGGCTCCTGTGACTTCGCCGGCTCCGCCACCGTCGCTCAGACTGACCCCAGTTATGGATCTTGTGTTTATCCATCTTCAATCAGTGCTGCAGGAGGAGCAATCACGCCGAGCCCTCCGGCTAACACTAGCCCAACCCCGACAATAACGGTACCAGCTACGACCACCACACCGAGCTTCAACAATGGCAATTCCGGTGACATTAATGGTCTAGATCCAGTATACAACCCGGCATCAACTTCAACTCCAACCAACTCGAAAGCCTCTTCGAGTTTTAGGATCCCGAAATTCTTGTTTTCAATTGCTATCTCACTCACTTCACTAACACTATAG

Protein sequence

MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFSIAISLTSLTL

Homology

[Close]

BLAST of CmaCh17G000980.1 vs. Swiss-Prot
Match: PDCB3_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.4e-24
Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 1


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+
Sbjct: 3   VFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTV 62

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITP--SPP 130
           ++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C +P+S S + G  TP  + P
Sbjct: 63  KSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASASGS-GTTTPVTTTP 122

Query: 131 ANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFS 190
           +   PT T T P  T TPS   G  G  +G++P Y        T+       + P+F F 
Sbjct: 123 STRVPTTTNTRP-YTITPS-TGGGLGIPSGINPDY--------TDPSFGFKLQSPRFGFI 176

Query: 191 IAISL 194
           +  +L
Sbjct: 183 VLFTL 176

[Close]

BLAST of CmaCh17G000980.1 vs. Swiss-Prot
Match: PDCB1_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.0e-23
Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ ++
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANT 131
           +H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C +P+S S + G+ T +P    
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTN 123

Query: 132 ---SPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRI 183
              SPT T    + T +P   N  +G   G        +   P  +  SS+F +
Sbjct: 124 PKGSPTTTTLPGSGTNSPYSGNPTNGVFGGNSTGGTTGTGINPDYTTDSSAFAL 177

[Close]

BLAST of CmaCh17G000980.1 vs. Swiss-Prot
Match: PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.7e-22
Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 1


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSIS-AAGGAITPSPPAN 131
           AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C +PSS S ++G   T   P  
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTVTPGK 123

Query: 132 TSPTPTITVPATTTTPSFNNGNSG 155
            SP  + ++   TT P  N+  SG
Sbjct: 124 NSPKGSNSI---TTFPGGNSPYSG 144

[Close]

BLAST of CmaCh17G000980.1 vs. Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = 1


Query: 20  PTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFN 79
           P+  V  + WCV +  A+ E LQ +LD+AC  G DC  +   G CF PN + +HA+YA N
Sbjct: 355 PSGKVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMN 414

Query: 80  SFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGG 122
            +FQ+    P  CDF+ +ATV   +PSY +CVYP      GG
Sbjct: 415 MYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGGGGGGGG 456

[Close]

BLAST of CmaCh17G000980.1 vs. Swiss-Prot
Match: ALL10_OLEEU (Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.4e-18
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 1


Query: 29  WCVARSEASYEALQTALDYACA-TGADCTPLLSNGLCFLPNTIQAHASYAFNSFFQRKAM 88
           WCV ++EA+   LQ+ +DY C+ +G DC P+ +NG CF PNT++AHASYA NS++Q K  
Sbjct: 37  WCVPKAEATDAQLQSNIDYVCSQSGMDCGPIQANGACFNPNTVRAHASYAMNSWYQSKGR 96

Query: 89  APGSCDFAGSATVAQTDPSYGSCVYPS 115
               CDF+G+  +  +DPS GSC + S
Sbjct: 97  NDFDCDFSGTGAITSSDPSNGSCSFLS 123

[Close]

BLAST of CmaCh17G000980.1 vs. TrEMBL
Match: A0A0A0LND4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139290 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-70
Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 1


Query: 1   MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLL 60
           MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++
Sbjct: 1   MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 60

Query: 61  SNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAA 120
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQ+DPSYGSCVYPSS+S+A
Sbjct: 61  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLSSA 120

Query: 121 GGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSS 180
           GGAITPSPPAN S  PTITVP  T TP+FNNG + D NGL+P YNP STS PTNS+AS S
Sbjct: 121 GGAITPSPPANAS--PTITVPG-TATPNFNNGGTSDTNGLNPDYNPTSTSNPTNSEASLS 180

Query: 181 FRIPK----FLFSIAISLTSLTL 199
              PK     LFSIAISL   T+
Sbjct: 181 STTPKLVILILFSIAISLPLQTM 200

[Close]

BLAST of CmaCh17G000980.1 vs. TrEMBL
Match: A0A0B0MVW3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28364 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.9e-45
Identity = 109/171 (63.74%), Postives = 126/171 (73.68%), Query Frame = 1


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           L  L L L   S  DGA WCVARS+AS +ALQTALDYACA+GADCTPL S+GLCFLPNTI
Sbjct: 10  LFFLSLLLTTFSVADGASWCVARSDASNQALQTALDYACASGADCTPLQSDGLCFLPNTI 69

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPAN 130
           QAHASYAFNS++QR+AMAPGSCDFAG+ATVA+TDPSYGSC+YPSS S AGG  TP+ P  
Sbjct: 70  QAHASYAFNSYYQRRAMAPGSCDFAGTATVAKTDPSYGSCMYPSSPSTAGGLPTPTTPTT 129

Query: 131 TSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTST-PTNSKASSSF 181
            +  P  T P TTTT     G +G  NGL+   NP  T   PT  ++ +SF
Sbjct: 130 VTNNP--TAPTTTTTAPL--GGAGGSNGLN---NPGLTPPFPTTDESRASF 173

[Close]

BLAST of CmaCh17G000980.1 vs. TrEMBL
Match: M5XQH3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026075mg PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.5e-44
Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 1


Query: 21  TSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNS 80
           +S+   + WCVARS+A+ +ALQT LDYAC  GADC+PL S GLC+LPNTIQAHASYAFNS
Sbjct: 21  SSSSSSSTWCVARSDATTQALQTGLDYACGAGADCSPLQSTGLCYLPNTIQAHASYAFNS 80

Query: 81  FFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITP-SPPANTSPTPTITV 140
           ++QRKAMAPGSCDFAG++T+AQTDPSYGSCVYPSS S AGG  TP +PPA    T   + 
Sbjct: 81  YYQRKAMAPGSCDFAGTSTIAQTDPSYGSCVYPSSASTAGGTATPTTPPA----TGIFSA 140

Query: 141 PATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFSIA 191
           P T TTP+F  G+   + G  P   P    +  NSKAS    IP  L  ++
Sbjct: 141 PTTPTTPTFGGGS---VTGFTPGMTPTIPDSDDNSKASLESMIPTILMHVS 184

[Close]

BLAST of CmaCh17G000980.1 vs. TrEMBL
Match: A0A0D2T8S3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156800 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.6e-44
Identity = 106/171 (61.99%), Postives = 126/171 (73.68%), Query Frame = 1


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           L  L L L   S  +GA WCVARS+AS +ALQTALDYACA+GADCTPL S+GLCFLPNTI
Sbjct: 120 LFFLSLLLTTFSVAEGASWCVARSDASNQALQTALDYACASGADCTPLQSDGLCFLPNTI 179

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPAN 130
           QAHASYAFNS++QR+A+APGSCDFAG+ATVA+TDPSYGSC+YPSS+S AGG  TP+ P  
Sbjct: 180 QAHASYAFNSYYQRRAIAPGSCDFAGTATVAKTDPSYGSCMYPSSLSTAGGLPTPTTPTT 239

Query: 131 TSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTST-PTNSKASSSF 181
            +  P  T P TTTT     G +   NGL+   NP  T   PT  ++ +SF
Sbjct: 240 VTNNP--TAPTTTTTAPL--GGADGSNGLN---NPGLTPPFPTTDESRASF 283

[Close]

BLAST of CmaCh17G000980.1 vs. TrEMBL
Match: A0A067KWK7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01120 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.6e-44
Identity = 111/195 (56.92%), Postives = 139/195 (71.28%), Query Frame = 1


Query: 5   VLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLC 64
           ++S  F++++ L  + T  +    WCVARS+AS +ALQTALDYAC+TGADC+PL SNGLC
Sbjct: 8   LISIFFIIVITLGNITTLPLAEGNWCVARSDASNQALQTALDYACSTGADCSPLQSNGLC 67

Query: 65  FLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAIT 124
           FLPNTIQAHASYAFNS+FQRK+MAPGSCDF+G+AT+A+TDPSYGSCVYPSS+S AGG  T
Sbjct: 68  FLPNTIQAHASYAFNSYFQRKSMAPGSCDFSGTATIARTDPSYGSCVYPSSLSTAGGGAT 127

Query: 125 PSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPT-NSKASSSFRIP 184
            +P + ++  P    P  TT+P     N G   GL+P   P   S PT NSKAS+     
Sbjct: 128 -TPTSTSTNNPNTPTPPMTTSPV----NGGGTVGLNPGMTP---SLPTDNSKASTGLMAA 187

Query: 185 KFLFSIAISLT-SLT 198
           K +  I+I L  SLT
Sbjct: 188 KVIMPISIFLVLSLT 194

[Close]

BLAST of CmaCh17G000980.1 vs. TAIR10
Match: AT4G13600.1 (AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 174.5 bits (441), Expect = 6.6e-44
Identity = 106/203 (52.22%), Postives = 129/203 (63.55%), Query Frame = 1


Query: 1   MATLVLSHSFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLS 60
           MA  + + SFLLLLL           A WCVAR + + +ALQ ALDYACA GADC P+  
Sbjct: 39  MALCLQTLSFLLLLLF------RSSAAMWCVARFDVTSQALQAALDYACAAGADCAPIQP 98

Query: 61  NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAG 120
           NGLCFLPNT+QAHASYAFNS+FQR AMAPGSC+FAG++T+A+TDPSYGSCVYP+S+  AG
Sbjct: 99  NGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYPNSVRNAG 158

Query: 121 GAI-------TPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTN 180
           G+        TPS     SP  T+  P+ TTT  F  G  G         NP  T+T TN
Sbjct: 159 GSASTTTVGGTPSTTVGNSPMTTLRPPSGTTTSPFGIGGGG--------LNPQGTTTTTN 218

Query: 181 SKASSSFRIPKFLFSIAISLTSL 197
           +  S S+ I K   SIA+ +  L
Sbjct: 219 TDESGSYIINKSTVSIALFVALL 227

[Close]

BLAST of CmaCh17G000980.1 vs. TAIR10
Match: AT1G18650.1 (AT1G18650.1 plasmodesmata callose-binding protein 3)

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-25
Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 1


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           + +L++ LL  +      WCV +   S   LQ  LDYAC  GADC P+   G CF PNT+
Sbjct: 3   VFVLVMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNPNTV 62

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITP--SPP 130
           ++H SYA NSFFQ+K  + G+CDFAG+AT + +DPSY +C +P+S S + G  TP  + P
Sbjct: 63  KSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTTCPFPASASGS-GTTTPVTTTP 122

Query: 131 ANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFS 190
           +   PT T T P  T TPS   G  G  +G++P Y        T+       + P+F F 
Sbjct: 123 STRVPTTTNTRP-YTITPS-TGGGLGIPSGINPDY--------TDPSFGFKLQSPRFGFI 176

Query: 191 IAISL 194
           +  +L
Sbjct: 183 VLFTL 176

[Close]

BLAST of CmaCh17G000980.1 vs. TAIR10
Match: AT5G61130.1 (AT5G61130.1 plasmodesmata callose-binding protein 1)

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 66/174 (37.93%), Postives = 92/174 (52.87%), Query Frame = 1


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L LL  +    A WCV ++  S   LQ  LDYAC  GADC P      CF P+ ++
Sbjct: 4   LVLSLLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANT 131
           +H +YA NSFFQ+K  +PGSC+F G+AT   +DPSY  C +P+S S + G+ T +P    
Sbjct: 64  SHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSASGSSGSTTVTPGTTN 123

Query: 132 ---SPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRI 183
              SPT T    + T +P   N  +G   G        +   P  +  SS+F +
Sbjct: 124 PKGSPTTTTLPGSGTNSPYSGNPTNGVFGGNSTGGTTGTGINPDYTTDSSAFAL 177

[Close]

BLAST of CmaCh17G000980.1 vs. TAIR10
Match: AT1G09460.1 (AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23
Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = 1


Query: 23  AVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNSFF 82
           +V G  WCVA+  AS  +LQ ALDYAC   ADC+ L   G C+ P ++Q+HAS+AFNS++
Sbjct: 131 SVSGQSWCVAKPGASQVSLQQALDYACGI-ADCSQLQQGGNCYSPISLQSHASFAFNSYY 190

Query: 83  QRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPANTSPTP---TITV 142
           Q+   +P SCDF G+A++  T+PS GSC+Y +  S +    TP     T+PTP   T+  
Sbjct: 191 QKNP-SPQSCDFGGAASLVNTNPSTGSCIYQTGSSTS----TPMTAGTTTPTPSTQTVNQ 250

Query: 143 PATTTTPSFNNGNSGDINGLDP-VYNPASTSTPTNSKASS 179
           P  T+TP    G      G  P ++NPA+ ++ T +  SS
Sbjct: 251 PPVTSTPIIPTGGGIIGVGTPPAIFNPANPTSNTLNNPSS 284

[Close]

BLAST of CmaCh17G000980.1 vs. TAIR10
Match: AT5G08000.1 (AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 3)

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23
Identity = 63/144 (43.75%), Postives = 82/144 (56.94%), Query Frame = 1


Query: 12  LLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQ 71
           L+L L  L  +    A WCV ++  S   LQ  LDYAC  GADC P    G CF P+ ++
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 72  AHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSIS-AAGGAITPSPPAN 131
           AH +YA NSFFQ+K  A  SC+F G+AT+  TDPSY  C +PSS S ++G   T   P  
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSASGSSGSGSTTVTPGK 123

Query: 132 TSPTPTITVPATTTTPSFNNGNSG 155
            SP  + ++   TT P  N+  SG
Sbjct: 124 NSPKGSNSI---TTFPGGNSPYSG 144

[Close]

BLAST of CmaCh17G000980.1 vs. NCBI nr
Match: gi|659114812|ref|XP_008457240.1| (PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 2 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 9.8e-74
Identity = 156/205 (76.10%), Postives = 172/205 (83.90%), Query Frame = 1


Query: 1   MATLVLSHS---FLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTP 60
           MAT + SH    FL   L FL+ TSAVDGAYWCVARS+A+YE+LQ A+DYACATGADCTP
Sbjct: 1   MATFLPSHYYSFFLFFFLFFLIGTSAVDGAYWCVARSDATYESLQAAIDYACATGADCTP 60

Query: 61  LLSNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSIS 120
           +L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GSAT+AQ+DPSYGSCVYPSS+S
Sbjct: 61  ILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFGGSATIAQSDPSYGSCVYPSSLS 120

Query: 121 AAGGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKAS 180
           +AGGAITPSPPANTS  PTITVP  T TPSFNNG +GD NG++PVYNP STS PTNS+AS
Sbjct: 121 SAGGAITPSPPANTS--PTITVPG-TATPSFNNGGTGDTNGVNPVYNPTSTSNPTNSEAS 180

Query: 181 SSFRIPK----FLFSIAISLTSLTL 199
           SSF  PK     LFSIAISL   T+
Sbjct: 181 SSFTTPKLVILILFSIAISLPLQTM 202

[Close]

BLAST of CmaCh17G000980.1 vs. NCBI nr
Match: gi|778668447|ref|XP_004138961.2| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 3.9e-70
Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 1


Query: 1   MATLVLSH-SFLLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLL 60
           MAT +LSH SF      FL  TS VDGAYWCVARS+A+YE+LQ ALDYACATGA+CTP++
Sbjct: 1   MATFLLSHYSFFFFFFFFLFGTSTVDGAYWCVARSDATYESLQAALDYACATGAECTPIM 60

Query: 61  SNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAA 120
            NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+AQ+DPSYGSCVYPSS+S+A
Sbjct: 61  LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSLSSA 120

Query: 121 GGAITPSPPANTSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSS 180
           GGAITPSPPAN S  PTITVP  T TP+FNNG + D NGL+P YNP STS PTNS+AS S
Sbjct: 121 GGAITPSPPANAS--PTITVPG-TATPNFNNGGTSDTNGLNPDYNPTSTSNPTNSEASLS 180

Query: 181 FRIPK----FLFSIAISLTSLTL 199
              PK     LFSIAISL   T+
Sbjct: 181 STTPKLVILILFSIAISLPLQTM 200

[Close]

BLAST of CmaCh17G000980.1 vs. NCBI nr
Match: gi|470124133|ref|XP_004298071.1| (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 197.2 bits (500), Expect = 2.7e-47
Identity = 115/184 (62.50%), Postives = 137/184 (74.46%), Query Frame = 1


Query: 10  FLLLLLLFLLPTSAVDGAY--WCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLP 69
           FLLL  L  + T+ V+GA   WCVARS+AS +ALQTALDYACA+GADC P+ S+GLC+LP
Sbjct: 12  FLLLTTLVCINTTGVEGATTTWCVARSDASNQALQTALDYACASGADCVPIQSDGLCYLP 71

Query: 70  NTIQAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSP 129
           NTIQAH SYAFNS++QRKAMAPGSCDF+G+ATVAQTDPSYGSCVYPSS+S AGG    S 
Sbjct: 72  NTIQAHTSYAFNSYYQRKAMAPGSCDFSGTATVAQTDPSYGSCVYPSSVSTAGGT---ST 131

Query: 130 PANTSPTPTITVPA----TTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASS-SFRI 187
             NT+PT T T+P+    TTT P+F NG  G   GL PV  PA    P +SKA+S  F +
Sbjct: 132 TPNTTPTTTTTIPSPPTTTTTNPTFGNGVVG---GLTPVTTPA---VPDDSKAASLQFML 186

[Close]

BLAST of CmaCh17G000980.1 vs. NCBI nr
Match: gi|728819183|gb|KHG03086.1| (hypothetical protein F383_28364 [Gossypium arboreum])

HSP 1 Score: 189.5 bits (480), Expect = 5.6e-45
Identity = 109/171 (63.74%), Postives = 126/171 (73.68%), Query Frame = 1


Query: 11  LLLLLLFLLPTSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTI 70
           L  L L L   S  DGA WCVARS+AS +ALQTALDYACA+GADCTPL S+GLCFLPNTI
Sbjct: 10  LFFLSLLLTTFSVADGASWCVARSDASNQALQTALDYACASGADCTPLQSDGLCFLPNTI 69

Query: 71  QAHASYAFNSFFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITPSPPAN 130
           QAHASYAFNS++QR+AMAPGSCDFAG+ATVA+TDPSYGSC+YPSS S AGG  TP+ P  
Sbjct: 70  QAHASYAFNSYYQRRAMAPGSCDFAGTATVAKTDPSYGSCMYPSSPSTAGGLPTPTTPTT 129

Query: 131 TSPTPTITVPATTTTPSFNNGNSGDINGLDPVYNPASTST-PTNSKASSSF 181
            +  P  T P TTTT     G +G  NGL+   NP  T   PT  ++ +SF
Sbjct: 130 VTNNP--TAPTTTTTAPL--GGAGGSNGLN---NPGLTPPFPTTDESRASF 173

[Close]

BLAST of CmaCh17G000980.1 vs. NCBI nr
Match: gi|596296202|ref|XP_007227133.1| (hypothetical protein PRUPE_ppa026075mg [Prunus persica])

HSP 1 Score: 186.8 bits (473), Expect = 3.6e-44
Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 1


Query: 21  TSAVDGAYWCVARSEASYEALQTALDYACATGADCTPLLSNGLCFLPNTIQAHASYAFNS 80
           +S+   + WCVARS+A+ +ALQT LDYAC  GADC+PL S GLC+LPNTIQAHASYAFNS
Sbjct: 21  SSSSSSSTWCVARSDATTQALQTGLDYACGAGADCSPLQSTGLCYLPNTIQAHASYAFNS 80

Query: 81  FFQRKAMAPGSCDFAGSATVAQTDPSYGSCVYPSSISAAGGAITP-SPPANTSPTPTITV 140
           ++QRKAMAPGSCDFAG++T+AQTDPSYGSCVYPSS S AGG  TP +PPA    T   + 
Sbjct: 81  YYQRKAMAPGSCDFAGTSTIAQTDPSYGSCVYPSSASTAGGTATPTTPPA----TGIFSA 140

Query: 141 PATTTTPSFNNGNSGDINGLDPVYNPASTSTPTNSKASSSFRIPKFLFSIA 191
           P T TTP+F  G+   + G  P   P    +  NSKAS    IP  L  ++
Sbjct: 141 PTTPTTPTFGGGS---VTGFTPGMTPTIPDSDDNSKASLESMIPTILMHVS 184

The following BLAST results are available for this feature:

BLAST of CmaCh17G000980.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDCB3_ARATH	5.4e-24	40.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV...	[more]
PDCB1_ARATH	6.0e-23	37.93	PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana GN=PDCB1 PE=1 SV...	[more]
PDCB2_ARATH	8.7e-22	43.75	PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana GN=PDCB2 PE=1 SV...	[more]
E137_ARATH	1.1e-19	43.14	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=...	[more]
ALL10_OLEEU	3.4e-18	48.28	Major pollen allergen Ole e 10 OS=Olea europaea PE=1 SV=1	[more]

BLAST of CmaCh17G000980.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LND4_CUCSA	2.7e-70	73.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G139290 PE=4 SV=1	[more]
A0A0B0MVW3_GOSAR	3.9e-45	63.74	Uncharacterized protein OS=Gossypium arboreum GN=F383_28364 PE=4 SV=1	[more]
M5XQH3_PRUPE	2.5e-44	58.48	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026075mg PE=4 SV=1	[more]
A0A0D2T8S3_GOSRA	5.6e-44	61.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156800 PE=4 SV=1	[more]
A0A067KWK7_JATCU	9.6e-44	56.92	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01120 PE=4 SV=1	[more]

BLAST of CmaCh17G000980.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13600.1	6.6e-44	52.22	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G18650.1	3.1e-25	40.00	plasmodesmata callose-binding protein 3	[more]
AT5G61130.1	3.4e-24	37.93	plasmodesmata callose-binding protein 1	[more]
AT1G09460.1	3.8e-23	41.88	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G08000.1	4.9e-23	43.75	glucan endo-1,3-beta-glucosidase-like protein 3	[more]

BLAST of CmaCh17G000980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114812\|ref\|XP_008457240.1\|	9.8e-74	76.10	PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 2 [Cucumis melo]	[more]
gi\|778668447\|ref\|XP_004138961.2\|	3.9e-70	73.89	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]	[more]
gi\|470124133\|ref\|XP_004298071.1\|	2.7e-47	62.50	PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Fragaria vesca subsp. vesca]	[more]
gi\|728819183\|gb\|KHG03086.1\|	5.6e-45	63.74	hypothetical protein F383_28364 [Gossypium arboreum]	[more]
gi\|596296202\|ref\|XP_007227133.1\|	3.6e-44	58.48	hypothetical protein PRUPE_ppa026075mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012946	X8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G000980	CmaCh17G000980	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000980.1	CmaCh17G000980.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000980.1.exon.1	CmaCh17G000980.1.exon.1	exon
CmaCh17G000980.1.exon.2	CmaCh17G000980.1.exon.2	exon
CmaCh17G000980.1.exon.3	CmaCh17G000980.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000980.1.five_prime_UTR.1	CmaCh17G000980.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000980.1.CDS.1	CmaCh17G000980.1.CDS.1	CDS
CmaCh17G000980.1.CDS.2	CmaCh17G000980.1.CDS.2	CDS
CmaCh17G000980.1.CDS.3	CmaCh17G000980.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000980.1.three_prime_UTR.1	CmaCh17G000980.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 29..99 score: 1.5
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 28..112 score: 4.1
None	No IPR available	PANTHER	PTHR32227	FAMILY NOT NAMED	coord: 29..158 score: 1.1