CmaCh16G011980 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G011980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionATP-dependent RNA helicase Dbp73D isoform 1
LocationCma_Chr16 : 9119166 .. 9122212 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTGTCAGACTGACCTCTCTACATTCTTCACGGCTTTATCATTACACTATTGATTTCGTGAAGCAAATCCGTTCGATCTTGGAACAAAAACACACGAACGAATCAAATCAAAATCCCAAATACTCCATTGTTCTTCATTTTCCAATTCGACCAATTTCGTCTTCTTTCTCCTCCTCTCTCTCTTCAATTCAAGAGAGAGAAGGCGATTTCTGTTTCTCCTCTGGACCAGTCGAGATCCGATCCTTATCGGGTTTGAAAAAACTTGGACTCTTGTGATTGTCTGTAGCTTTTGGACTTTTTTAGAGAGAGAAGTAGCGAGACTCTTTGAAGTGTGAAGAGCTGAGAGGAGAGGAGAGTTTATAGGGCAAAGAGCGGCGAGATCTCGATACTCATTAAGTTTTTGCGAGTATTTTTTGTTTTGGGCATTTTGTCGAACAGATGGTGGGCATTTTTTCAAGGTTTTCTTCTAGCAGAACAGGGCATCGACGAGCTCAAAGTGCGCTTGTAAGTAGTTCGTCGCTTTTGAAGATTGATTGATCTTATTTTATTTTCTTTTTTAATCTCTATATGGCGAATGAAGATTGATCTTACTTGTTCATCTATTTCGAATTTGTGTACTGCGTTGAGTTCGTCGCTTTCGAAGTTATGTATCTCGCGATTGAGATTGTTGATTCTGTTTCTGAAGAATCTGAACTTATTCGTCAAACGTTCAAATAATTTTGATTTCCTGGTTCTTCATGGCTGCTGGATTGGTTAATTTTTGATAAATTGGAATCTTACCTTCCTTGTTGTGGTGGAGAATACGATTCTTTGGGGCCATTTTTTTGTAGAATTATCCCAAACTCGAATCTATTGCTGATTTTGGACTCTTTTTTTGTATGTATTAAATCATATTAATAATCATGAACTTTGTTGATTCCATAGTCGTGGACATGTTGAGCTTTTATGCTTCTGATTTCCATGGCTGTTTCTGAAATTTTATCATATTTGCTATTTTACTTGTCCTGTTTTACTTTGAAACTTTGATGGAGGTCAGTAAATTATCATCTGTGCCAATGTTTTTCTCAACTTTTTAGATGTGGTAGACATTTAGTTTAATATATTGGGTGGTTTTGATGCTTATAAAGTGTGTTTTTCTGATGCAGGATGGGAAAGGACTGCCTCCAAACCCTGAGAATACTGGTGTTAGTGCAACCCCTGCTGCTGTTTCTCATGGAATTGAAGTAGCAGTGGAGTTTAAGCCCGTTGAACACCCGATCGAGCCTCACGACAACGATAAGCCAATTCAGTGCCCGTTGCCCGAACCGTCTATTCTGAATGTAAGCTCCCAAATCGATCTTCTTACTCAATTTTGTCAGGTCAATTATATATCCGAGTTGCCTTGTTGCATATATTGATGTATATACGTGGAAGGGTGAAAAGTTATGTATCTGGCCAAGCCCACCATTAGCATATATTGTCTTTTTTGGGCTTTCCTTTTCAGGCTTCTCTTCAAGGTTTTTAAAATGTATCTTCTTGGAAGATGTTTTCACACCCTTATAAAAAATGTTTCGTTCTCCTTCTCAAACCGATGTGAGATCTCAAAATTCACCCCCTTTCGAGGCCTAGCGTCCTTGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCCAATCCACCTCCTTCGTGGCTTAGCGTCTTTACTAGCACACCGCTTCATGTTCACCTCTCTTTGGGGCTCAGCCTCCTCGTTGGCACATCGTCCAGTGTCTAGCTTTGATACCAGTTGTAATAGCTCAAGCCCACCGCTAGCAAATATTGTCTTTTTTGGGCTTTCCCTTTCGGGCTTCCACTCAAGGTTTTTTAAAAAAACGCGTCTTCTAGGGAGAGATTTCCACACCCTTATAAAAAATGTTTTGTTCTCCTCCCCAACCGATTGGAATCTCACAATTGAAGTGTTTGACAGGTCGAGTCATTTATTCGTTGATTCATTTTGGGAAATCTGTTCATGATTTTAAAGACGAGATTTAGAACTGTTGTACAAGAAGCCAGTAGAGATGTTTCTGTATTCTCCAGAGCAAACTTATTGCATAAAATCACCAGTTCCACCTAAACCAACCTTTCCTTATTGATTTACCAAACTTATCAGTGAAAGTTGTAGGTTTTATGATATATCTTGAGAATCTGATTTTGAACTGCTCAAACACTAGGATGGAAGAATATGGAAGGAACGAGTGTCGAGTATACGAAAACTGCCAGATTTGCCTGTAATGAAAGAAGCAGAAGTCGGTGAGACGAGACCACGGGCCACACGAACAATCTTACCATCCATCAGCGCTCCTGAACACAACATCCTAAACCTGCTCAAGGAATCCGGGATGTAGCGTAACTAGTTAACTCTCATCTGGAATTTAGAGTTCCCTATACAATATTTTCTAAAGTTTGCACCCTCCTTCCAGATTTTTACCTTTATTGTTTTTCCATGTACAATAATAGCATGTCACAGGTTCAGTGTTTACATAATATATCAAAAGTTTAGCCTTCAGTGTTATCTCTGCTAGTTTTGTTGTTCAGGTACTATTTTGTCATCGAGATCCCGAAAGTCAAGGAAGAGCCGTTCCGAAAAGTTGCTTCCCCTTTTCAACGTCTCAATATTTCCTTAGGAAACGATATCAAGACTTAGTTTTGAAGAACAAGAGCCTGTAGCACTGTACGTACAGACTTAAAACTGAAACCCGAATAGGACTGTTTGAAGCACATGCGTACAAAAATTGAGTCACGTCGATATTTTTCGACATTGTTGCTAGGAACGTTCAAATTCGATGGCTTTGACATGCATATCGACAACCCACACCCAAAAATGGTTTTGCCCTTGGCCAATTTTCGTTCGACTGACGTTGGGTACCATCGTGACTTTTCGTTTGCGTTCTTAGACAGCTCCAAAAAAACTGCTTTTTCATTTCAATGTCTCAATATTTCTTTAGGATACAGTACCATGACTTGAGTTTCGAAGAAAAAGAACTTGTATCACTGTATGTATAGACTTAAAATCGAATCCCT

mRNA sequence

CTTCTGTCAGACTGACCTCTCTACATTCTTCACGGCTTTATCATTACACTATTGATTTCGTGAAGCAAATCCGTTCGATCTTGGAACAAAAACACACGAACGAATCAAATCAAAATCCCAAATACTCCATTGTTCTTCATTTTCCAATTCGACCAATTTCGTCTTCTTTCTCCTCCTCTCTCTCTTCAATTCAAGAGAGAGAAGGCGATTTCTGTTTCTCCTCTGGACCAGTCGAGATCCGATCCTTATCGGGTTTGAAAAAACTTGGACTCTTGTGATTGTCTGTAGCTTTTGGACTTTTTTAGAGAGAGAAGTAGCGAGACTCTTTGAAGTGTGAAGAGCTGAGAGGAGAGGAGAGTTTATAGGGCAAAGAGCGGCGAGATCTCGATACTCATTAAGTTTTTGCGAGTATTTTTTGTTTTGGGCATTTTGTCGAACAGATGGTGGGCATTTTTTCAAGGTTTTCTTCTAGCAGAACAGGGCATCGACGAGCTCAAAGTGCGCTTGATGGGAAAGGACTGCCTCCAAACCCTGAGAATACTGGTGTTAGTGCAACCCCTGCTGCTGTTTCTCATGGAATTGAAGTAGCAGTGGAGTTTAAGCCCGTTGAACACCCGATCGAGCCTCACGACAACGATAAGCCAATTCAGTGCCCGTTGCCCGAACCGTCTATTCTGAATGATGGAAGAATATGGAAGGAACGAGTGTCGAGTATACGAAAACTGCCAGATTTGCCTGTAATGAAAGAAGCAGAAGTCGGTGAGACGAGACCACGGGCCACACGAACAATCTTACCATCCATCAGCGCTCCTGAACACAACATCCTAAACCTGCTCAAGGAATCCGGGATGTAGCGTAACTAGTTAACTCTCATCTGGAATTTAGAGTTCCCTATACAATATTTTCTAAAGTTTGCACCCTCCTTCCAGATTTTTACCTTTATTGTTTTTCCATGTACAATAATAGCATGTCACAGGTTCAGTGTTTACATAATATATCAAAAGTTTAGCCTTCAGTGTTATCTCTGCTAGTTTTGTTGTTCAGGTACTATTTTGTCATCGAGATCCCGAAAGTCAAGGAAGAGCCGTTCCGAAAAGTTGCTTCCCCTTTTCAACGTCTCAATATTTCCTTAGGAAACGATATCAAGACTTAGTTTTGAAGAACAAGAGCCTGTAGCACTGTACGTACAGACTTAAAACTGAAACCCGAATAGGACTGTTTGAAGCACATGCGTACAAAAATTGAGTCACGTCGATATTTTTCGACATTGTTGCTAGGAACGTTCAAATTCGATGGCTTTGACATGCATATCGACAACCCACACCCAAAAATGGTTTTGCCCTTGGCCAATTTTCGTTCGACTGACGTTGGGTACCATCGTGACTTTTCGTTTGCGTTCTTAGACAGCTCCAAAAAAACTGCTTTTTCATTTCAATGTCTCAATATTTCTTTAGGATACAGTACCATGACTTGAGTTTCGAAGAAAAAGAACTTGTATCACTGTATGTATAGACTTAAAATCGAATCCCT

Coding sequence (CDS)

ATGGTGGGCATTTTTTCAAGGTTTTCTTCTAGCAGAACAGGGCATCGACGAGCTCAAAGTGCGCTTGATGGGAAAGGACTGCCTCCAAACCCTGAGAATACTGGTGTTAGTGCAACCCCTGCTGCTGTTTCTCATGGAATTGAAGTAGCAGTGGAGTTTAAGCCCGTTGAACACCCGATCGAGCCTCACGACAACGATAAGCCAATTCAGTGCCCGTTGCCCGAACCGTCTATTCTGAATGATGGAAGAATATGGAAGGAACGAGTGTCGAGTATACGAAAACTGCCAGATTTGCCTGTAATGAAAGAAGCAGAAGTCGGTGAGACGAGACCACGGGCCACACGAACAATCTTACCATCCATCAGCGCTCCTGAACACAACATCCTAAACCTGCTCAAGGAATCCGGGATGTAG

Protein sequence

MVGIFSRFSSSRTGHRRAQSALDGKGLPPNPENTGVSATPAAVSHGIEVAVEFKPVEHPIEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVGETRPRATRTILPSISAPEHNILNLLKESGM
Homology
[Close]
BLAST of CmaCh16G011980 vs. TrEMBL
Match: A0A0A0L159_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006710 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 5.8e-64
Identity = 126/138 (91.30%), Postives = 132/138 (95.65%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGK-GLPPNPENTGVSATPAAVSHGIEVAVEFKPVEHP 60
           MVGIFSRFSSSRTGHRRAQSALDG+ GLPPNPE+TGVSAT A  SHGIEVAVEFKPVEHP
Sbjct: 1   MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSATASHGIEVAVEFKPVEHP 60

Query: 61  IEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVGETRPRATRTILP 120
           IEP DND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDLPVMKEAEVGETRPR TRTILP
Sbjct: 61  IEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP 120

Query: 121 SISAPEHNILNLLKESGM 138
           SISAPEHNILNLL+ESG+
Sbjct: 121 SISAPEHNILNLLEESGI 138

[Close]
BLAST of CmaCh16G011980 vs. TrEMBL
Match: A0A068UVV0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034181001 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.3e-43
Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGKG-LPPNPENTG---VSATPAAVSHGIEVAVEFKPV 60
           MVGIFSRFS S+ GHRR+QSALD +  LPPN E TG   ++   +A +HGIE+AVEFKPV
Sbjct: 1   MVGIFSRFSVSKVGHRRSQSALDEREVLPPNLEATGAVTLAGATSATTHGIEIAVEFKPV 60

Query: 61  EHPIEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVGE-------T 120
           EHPIEPHDND+PI CPLPEPSILNDGRIWKERVS+  +  DLPVM+E    E        
Sbjct: 61  EHPIEPHDNDRPIHCPLPEPSILNDGRIWKERVSAGARRSDLPVMQEGTAIEPETTGPKP 120

Query: 121 RPRATRTILPSISAPEHNILNLLKESGM 138
           RP   R ILPSISAPEHNIL LL+ESG+
Sbjct: 121 RPPPHRVILPSISAPEHNILKLLEESGI 148

[Close]
BLAST of CmaCh16G011980 vs. TrEMBL
Match: M5WCB0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012893mg PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-42
Identity = 97/144 (67.36%), Postives = 111/144 (77.08%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGKG-LPPNPENTGVSATPAAVSHGIEVAVEFKPVEHP 60
           MVGIFSRFS SR  HRR QSA+D +  LPPN E TG +  P   SHGIEVAVEFKPVEHP
Sbjct: 1   MVGIFSRFSVSRAAHRRTQSAIDEREVLPPNSEGTGSATAPITASHGIEVAVEFKPVEHP 60

Query: 61  IEPHDNDKPIQCPLPEPSILNDGRIWKERVS-SIRKLPDLPVMKE-----AEVGETRPRA 120
           IEP +ND+PIQCPLPEPSILNDGR+WKERVS ++ +  DLPVMKE     +E   T+PR 
Sbjct: 61  IEPLNNDRPIQCPLPEPSILNDGRLWKERVSATVPRRGDLPVMKEGGSIDSEDSGTKPRQ 120

Query: 121 TRT---ILPSISAPEHNILNLLKE 135
            RT   ILPS+SAPEHN+LNLL+E
Sbjct: 121 KRTNRMILPSLSAPEHNLLNLLEE 144

[Close]
BLAST of CmaCh16G011980 vs. TrEMBL
Match: B9MU90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01740g PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42
Identity = 99/146 (67.81%), Postives = 112/146 (76.71%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGKG-LPPNPENTGVSATPAAVSHGIEVAVEFKPVEHP 60
           MVGIFSRFS  R GHRR QSALD +  LPPN + TG +A  AA  HGIEVAVEFKPVEHP
Sbjct: 1   MVGIFSRFSVGRGGHRRTQSALDEREVLPPNADVTGAAAVVAAAPHGIEVAVEFKPVEHP 60

Query: 61  IEPHDNDKPIQCPLPEPSILNDGRIWKERVS-SIRKLPDLPVMK-----EAEVGETRPR- 120
           IEP DND+PIQCPLPEPSILNDGR+WKERVS ++ +  DLPVMK     E+E  E+RPR 
Sbjct: 61  IEPLDNDQPIQCPLPEPSILNDGRLWKERVSATVHRRGDLPVMKEGGALESENVESRPRP 120

Query: 121 ----ATRTILPSISAPEHNILNLLKE 135
               + R ILPSISAPEHN+L LL+E
Sbjct: 121 RPNQSNRLILPSISAPEHNLLKLLEE 146

[Close]
BLAST of CmaCh16G011980 vs. TrEMBL
Match: K4CMY5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 96/148 (64.86%), Postives = 108/148 (72.97%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDG-KGLPPNPENTGVSATPAAVS---HGIEVAVEFKPV 60
           MVGIFSRFS SRTGHRRAQSALD  + LPPN E  G      A S   HGIE+AVEFKPV
Sbjct: 1   MVGIFSRFSVSRTGHRRAQSALDETEVLPPNTETIGAVTLAGASSINPHGIEIAVEFKPV 60

Query: 61  EHPIEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVG-------ET 120
           EHP EP  ND+PI CPLPEPSILNDGRIWKERVS++R+  D+PVM+E           + 
Sbjct: 61  EHPTEPLHNDRPILCPLPEPSILNDGRIWKERVSAVRRRADIPVMQEGTTAAPESAGTKP 120

Query: 121 RPRATRTILPSISAPEHNILNLLKESGM 138
           RP   R ILPSISAPEH+IL LL+ESG+
Sbjct: 121 RPSMNRVILPSISAPEHSILKLLEESGI 148

[Close]
BLAST of CmaCh16G011980 vs. TAIR10
Match: AT1G31940.1 (AT1G31940.1 unknown protein)

HSP 1 Score: 161.0 bits (406), Expect = 5.2e-40
Identity = 88/146 (60.27%), Postives = 105/146 (71.92%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGKG-LPPNPENTGVSATPAAVS-HGIEVAVEFKPVEH 60
           MVGIFSRFS  R+ HRR QSA+D K  L PN +    + T A  + HGIEVA EFKPVEH
Sbjct: 1   MVGIFSRFSVGRSTHRRTQSAIDDKEVLAPNSDVIAATTTTATTATHGIEVATEFKPVEH 60

Query: 61  PIEPHDNDKPIQCPLPEPSILNDGRIWKERVS-SIRKLPDLPVMKEAEVGET-------- 120
           P+EP DND PIQCPLPEPSILNDGRIWKERVS S+R+  DL ++K+    E+        
Sbjct: 61  PVEPLDNDLPIQCPLPEPSILNDGRIWKERVSASMRRKGDLQIVKDEAASESDGSAPKPP 120

Query: 121 -RPRATRTILPSISAPEHNILNLLKE 135
             P+  R+ILPS+SAPEHN+LNLL+E
Sbjct: 121 RPPQPNRSILPSLSAPEHNLLNLLEE 146

[Close]
BLAST of CmaCh16G011980 vs. TAIR10
Match: AT2G35585.1 (AT2G35585.1 unknown protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.2e-36
Identity = 83/149 (55.70%), Postives = 104/149 (69.80%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGKG-LPPNPENTGVSATPAAVSHGIEVAVEFKPVEHP 60
           MVGIFSRFS  R  HRR QSA+DG+  L P  +    + T    +HGIEVA EFKPV+HP
Sbjct: 1   MVGIFSRFSVVRGSHRRTQSAIDGREVLSPRSDLAPATNTTTTETHGIEVATEFKPVDHP 60

Query: 61  IEPHDNDKPIQCPLPEPSILNDGRIWKERV--SSIRKLPDLPVM-----KEAEVGET--- 120
           +EP DND+PIQCPLPEPSILNDGR+WKERV  SS+R+  DL ++     +E++V  T   
Sbjct: 61  MEPLDNDQPIQCPLPEPSILNDGRLWKERVSASSMRRRSDLAIVQDGMDEESDVSVTSIP 120

Query: 121 ----RPRATRTILPSISAPEHNILNLLKE 135
               +    R ILPS+SAPEH++LNLL+E
Sbjct: 121 SRTSQCNTNRPILPSLSAPEHDLLNLLEE 149

[Close]
BLAST of CmaCh16G011980 vs. NCBI nr
Match: gi|659095515|ref|XP_008448622.1| (PREDICTED: uncharacterized protein LOC103490741 isoform X2 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 2.9e-64
Identity = 127/138 (92.03%), Postives = 133/138 (96.38%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGK-GLPPNPENTGVSATPAAVSHGIEVAVEFKPVEHP 60
           MVGIFSRFSSSRTGHRRAQSALDG+ GLPPNPE+TGVSAT AA SHGIEVAVEFKPVEHP
Sbjct: 1   MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHP 60

Query: 61  IEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVGETRPRATRTILP 120
           IEP DND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDLPVMKEAEVGETRPR TRTILP
Sbjct: 61  IEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP 120

Query: 121 SISAPEHNILNLLKESGM 138
           SISAPEHNILNLL+ESG+
Sbjct: 121 SISAPEHNILNLLEESGI 138

[Close]
BLAST of CmaCh16G011980 vs. NCBI nr
Match: gi|449456751|ref|XP_004146112.1| (PREDICTED: uncharacterized protein LOC101208810 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 8.3e-64
Identity = 126/138 (91.30%), Postives = 132/138 (95.65%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDGK-GLPPNPENTGVSATPAAVSHGIEVAVEFKPVEHP 60
           MVGIFSRFSSSRTGHRRAQSALDG+ GLPPNPE+TGVSAT A  SHGIEVAVEFKPVEHP
Sbjct: 1   MVGIFSRFSSSRTGHRRAQSALDGREGLPPNPESTGVSATSATASHGIEVAVEFKPVEHP 60

Query: 61  IEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVGETRPRATRTILP 120
           IEP DND+PIQCPLPEPSILNDGRIWKERVSS+RKLPDLPVMKEAEVGETRPR TRTILP
Sbjct: 61  IEPLDNDQPIQCPLPEPSILNDGRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILP 120

Query: 121 SISAPEHNILNLLKESGM 138
           SISAPEHNILNLL+ESG+
Sbjct: 121 SISAPEHNILNLLEESGI 138

[Close]
BLAST of CmaCh16G011980 vs. NCBI nr
Match: gi|659095513|ref|XP_008448621.1| (PREDICTED: uncharacterized protein LOC103490741 isoform X1 [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 5.6e-52
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 1 

Query: 23  DGK-GLPPNPENTGVSATPAAVSHGIEVAVEFKPVEHPIEPHDNDKPIQCPLPEPSILND 82
           DG+ GLPPNPE+TGVSAT AA SHGIEVAVEFKPVEHPIEP DND+PIQCPLPEPSILND
Sbjct: 29  DGREGLPPNPESTGVSATSAAASHGIEVAVEFKPVEHPIEPLDNDQPIQCPLPEPSILND 88

Query: 83  GRIWKERVSSIRKLPDLPVMKEAEVGETRPRATRTILPSISAPEHNILNLLKESGM 138
           GRIWKERVSS+RKLPDLPVMKEAEVGETRPR TRTILPSISAPEHNILNLL+ESG+
Sbjct: 89  GRIWKERVSSMRKLPDLPVMKEAEVGETRPRPTRTILPSISAPEHNILNLLEESGI 144

[Close]
BLAST of CmaCh16G011980 vs. NCBI nr
Match: gi|697165508|ref|XP_009591556.1| (PREDICTED: uncharacterized protein LOC104088562 [Nicotiana tomentosiformis])

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43
Identity = 97/147 (65.99%), Postives = 113/147 (76.87%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSAL-DGKGLPPNPENTG---VSATPAAVSHGIEVAVEFKPV 60
           MVGIFSRFS SR GHRRAQSAL + + LPPN E TG   ++  P+   HGIE+AVEFKPV
Sbjct: 1   MVGIFSRFSVSRNGHRRAQSALGETEVLPPNTETTGAATIAGAPSITPHGIEIAVEFKPV 60

Query: 61  EHPIEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVGE----TRPR 120
           EHP EP  ND+PIQCP+PEPSILNDGRIWKERVS++R+  D+PVM+E    E    TRPR
Sbjct: 61  EHPTEPLHNDRPIQCPIPEPSILNDGRIWKERVSAVRRRADIPVMQEGTTAEPEAGTRPR 120

Query: 121 --ATRTILPSISAPEHNILNLLKESGM 138
               R ILPSISAPEH+IL LL+ESG+
Sbjct: 121 PPMNRVILPSISAPEHSILKLLEESGI 147

[Close]
BLAST of CmaCh16G011980 vs. NCBI nr
Match: gi|698542997|ref|XP_009766590.1| (PREDICTED: uncharacterized protein LOC104217938 [Nicotiana sylvestris])

HSP 1 Score: 183.0 bits (463), Expect = 3.6e-43
Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 1 

Query: 1   MVGIFSRFSSSRTGHRRAQSALDG-KGLPPNPENTG---VSATPAAVSHGIEVAVEFKPV 60
           MVGIFSRFS SR GHRRAQSALD  + LPPN E TG   ++  P+   HGIE+AVEFKPV
Sbjct: 1   MVGIFSRFSVSRNGHRRAQSALDETEVLPPNTETTGAATIAGAPSITPHGIEIAVEFKPV 60

Query: 61  EHPIEPHDNDKPIQCPLPEPSILNDGRIWKERVSSIRKLPDLPVMKEAEVGE-----TRP 120
           EHP EP  ND PIQCP+PEPSILNDGRIWKERVS++R+  D+PVM+E    E     TRP
Sbjct: 61  EHPTEPLHNDLPIQCPIPEPSILNDGRIWKERVSAVRRRADIPVMQEGTTAEPEAAGTRP 120

Query: 121 R--ATRTILPSISAPEHNILNLLKESGM 138
           R    R ILPSISAPEH+IL LL+ESG+
Sbjct: 121 RPPMNRVILPSISAPEHSILKLLEESGI 148

The following BLAST results are available for this feature:
BLAST of CmaCh16G011980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh16G011980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L159_CUCSA5.8e-6491.30Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006710 PE=4 SV=1[more]
A0A068UVV0_COFCA3.3e-4366.22Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034181001 PE=4 SV=1[more]
M5WCB0_PRUPE1.3e-4267.36Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012893mg PE=4 SV=1[more]
B9MU90_POPTR2.8e-4267.81Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01740g PE=4 SV=1[more]
K4CMY5_SOLLC1.4e-4164.86Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of CmaCh16G011980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31940.15.2e-4060.27 unknown protein[more]
AT2G35585.11.2e-3655.70 unknown protein[more]
BLAST of CmaCh16G011980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659095515|ref|XP_008448622.1|2.9e-6492.03PREDICTED: uncharacterized protein LOC103490741 isoform X2 [Cucumis melo][more]
gi|449456751|ref|XP_004146112.1|8.3e-6491.30PREDICTED: uncharacterized protein LOC101208810 [Cucumis sativus][more]
gi|659095513|ref|XP_008448621.1|5.6e-5290.52PREDICTED: uncharacterized protein LOC103490741 isoform X1 [Cucumis melo][more]
gi|697165508|ref|XP_009591556.1|2.8e-4365.99PREDICTED: uncharacterized protein LOC104088562 [Nicotiana tomentosiformis][more]
gi|698542997|ref|XP_009766590.1|3.6e-4366.22PREDICTED: uncharacterized protein LOC104217938 [Nicotiana sylvestris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G011980.1CmaCh16G011980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34196FAMILY NOT NAMEDcoord: 1..135
score: 8.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G011980Cucsa.322190Cucumber (Gy14) v1cgycmaB0887
CmaCh16G011980Cla008846Watermelon (97103) v1cmawmB292
CmaCh16G011980Csa3G006710Cucumber (Chinese Long) v2cmacuB326
CmaCh16G011980MELO3C013813Melon (DHL92) v3.5.1cmameB291
CmaCh16G011980ClCG10G001200Watermelon (Charleston Gray)cmawcgB284
CmaCh16G011980CSPI03G01220Wild cucumber (PI 183967)cmacpiB332
CmaCh16G011980CmoCh06G006230Cucurbita moschata (Rifu)cmacmoB344
CmaCh16G011980CmoCh16G012450Cucurbita moschata (Rifu)cmacmoB323
CmaCh16G011980Lsi07G011530Bottle gourd (USVL1VR-Ls)cmalsiB324
CmaCh16G011980Cp4.1LG14g09950Cucurbita pepo (Zucchini)cmacpeB345
CmaCh16G011980Cp4.1LG08g08840Cucurbita pepo (Zucchini)cmacpeB363
CmaCh16G011980MELO3C013813.2Melon (DHL92) v3.6.1cmamedB342
CmaCh16G011980CsaV3_3G001240Cucumber (Chinese Long) v3cmacucB0380
CmaCh16G011980Cla97C10G185820Watermelon (97103) v2cmawmbB337
CmaCh16G011980Bhi07G000832Wax gourdcmawgoB0449
CmaCh16G011980CsGy3G001130Cucumber (Gy14) v2cgybcmaB339
CmaCh16G011980Carg23581Silver-seed gourdcarcmaB1453
CmaCh16G011980Carg23414Silver-seed gourdcarcmaB1329
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G011980CmaCh06G006160Cucurbita maxima (Rimu)cmacmaB357
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G011980Cucurbita pepo (Zucchini)cmacpeB349
CmaCh16G011980Cucurbita pepo (Zucchini)cmacpeB360
CmaCh16G011980Bottle gourd (USVL1VR-Ls)cmalsiB297
CmaCh16G011980Silver-seed gourdcarcmaB1077
CmaCh16G011980Wax gourdcmawgoB0444
CmaCh16G011980Cucurbita maxima (Rimu)cmacmaB343
CmaCh16G011980Cucurbita maxima (Rimu)cmacmaB344
CmaCh16G011980Cucurbita moschata (Rifu)cmacmoB331
CmaCh16G011980Cucurbita moschata (Rifu)cmacmoB332