CmaCh16G003220 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G003220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ycf15 protein
Location	Cma_Chr16 : 1514312 .. 1515657 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGCTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCTGTAGGTTCGAGCCGGAGCTACCATCTCTTGACCAACGACGAGTCGTCTCACCGACGAACACGATCGGACTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACAGTCGGGGTACGAGTTAATGCATTCCCGTAGCGTTAGCAAGCGTGCGTTTGGATCATCCTATGCTGGCCAGGTTTCAAATAATGGTAACCCTCCTCGCTGAGAAGATGGCTAAGTGGGAAGGATTATTCAGAAATTTAATGATTTGTAAAACGTTATTATTATTATTATTACTATTTAATTTGTTTGATTGTATTGGTTTGGTGAAGAACAACGTGTAAATTAAAGTGGTGGGTCTCCATGAAATGATGTGAACAGCCATTTTCTATGCCAATAAGATGTTTTTTTCTTTTTTTAAAGATTAATTATAAAAAAAAAGTCGTCAAAGGTGAGTTCAGCTCAACATGAAATTTAGTGGGCAGCCATCTTCTTTGAATTTGACAATGGTACATTGAACCGTTCGACATAGGGTTCTTGTCGTACTGGAGTTTCCGAAACGGATCCTATCAAATGTTTCACATTTTCTATGATCATCTCTATTTTAGGTATTCGGAGAATCCTCCTTAATAGACGAAATATTCATATTATGTCAATGTCAATTGAATCAATGTTATTAACTGGGAATTCAAACTTTTTGGTATTTTTCGTTTCTTCGGATGATATGATGGGTCAATCATTTGATTCATTGGTTCCAATGATGCCAGCTGCGAAATTTGCTATTGGGTGCTGCACCATTTTTCTTACAGGATACCAAGATGAGGCGAGATATCACCGAGGAGTTCAAGTTAAAGAAGAAAAGACGAGTGAATAAGGTCTAAAACCTAATAAAAGAATTGAAATGAATTCCCTTCTTAGTGATTCAATCATAAGAACGGGGAGAACTTATATTGGTCTGTTTTTATGTTGGGTGATCTAGTTTGTGAATAATTGGTTTAAAATGAATAGCTAAATAAAATAGTAACTAATAATTGGTTTAACTGAATAACTAAATAAAATAGATAAACCCTTCTCTTAGTCTTAGGTTGACAGATCTTCTCCATTGAAAGATTCCTTATGTGCATAATACACATTTCAGTTCAATGAGCTCAAATCTAATTGTTTTGTTTTGAAGCAAACCACGGAGTGGTTTGTCATATTCAGATATTCACGACCAAGAAACATTGGATTCTCTTTCAGATAGGCCCTGAAAGGAGAAGGAAGGCCGGAATGCCAACCGGCGTCTATTATTGA

mRNA sequence

ATGGAGGGCTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCTGTAGGTTCGAGCCGGAGCTACCATCTCTTGACCAACGACGAGTCGTCTCACCGACGAACACGATCGGACTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACAGTCGGGGTACGAGTTAATGCATTCCCGTAGCGTTAGCAAGCGTGCGTTTGGATCATCCTATGCTGGCCAGGTTTCAAATAATGCAAACCACGGAGTGGTTTGTCATATTCAGATATTCACGACCAAGAAACATTGGATTCTCTTTCAGATAGGCCCTGAAAGGAGAAGGAAGGCCGGAATGCCAACCGGCGTCTATTATTGA

Coding sequence (CDS)

ATGGAGGGCTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCTGTAGGTTCGAGCCGGAGCTACCATCTCTTGACCAACGACGAGTCGTCTCACCGACGAACACGATCGGACTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACAGTCGGGGTACGAGTTAATGCATTCCCGTAGCGTTAGCAAGCGTGCGTTTGGATCATCCTATGCTGGCCAGGTTTCAAATAATGCAAACCACGGAGTGGTTTGTCATATTCAGATATTCACGACCAAGAAACATTGGATTCTCTTTCAGATAGGCCCTGAAAGGAGAAGGAAGGCCGGAATGCCAACCGGCGTCTATTATTGA

Protein sequence

MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQQSGYELMHSRSVSKRAFGSSYAGQVSNNANHGVVCHIQIFTTKKHWILFQIGPERRRKAGMPTGVYY

Homology

[Close]

BLAST of CmaCh16G003220 vs. Swiss-Prot
Match: YCF15_ATRBE (Putative uncharacterized protein ycf15 OS=Atropa belladonna GN=ycf15-A PE=5 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1


Query: 96  IQIFTTKKHWILFQIGPERRRKAGMPTGVYY 127
           +QIFTTKK+WILF+IGPERRRKAGMPTGVYY
Sbjct: 35  VQIFTTKKYWILFRIGPERRRKAGMPTGVYY 65

[Close]

BLAST of CmaCh16G003220 vs. Swiss-Prot
Match: YCF15_NICSY (Putative uncharacterized protein ycf15 OS=Nicotiana sylvestris GN=ycf15-A PE=5 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1


Query: 96  IQIFTTKKHWILFQIGPERRRKAGMPTGVYY 127
           +QIFTTKK+WILF+IGPERRRKAGMPTGVYY
Sbjct: 52  VQIFTTKKYWILFRIGPERRRKAGMPTGVYY 82

[Close]

BLAST of CmaCh16G003220 vs. Swiss-Prot
Match: YCF15_NICTO (Putative uncharacterized protein ycf15 OS=Nicotiana tomentosiformis GN=ycf15-A PE=5 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1


Query: 96  IQIFTTKKHWILFQIGPERRRKAGMPTGVYY 127
           +QIFTTKK+WILF+IGPERRRKAGMPTGVYY
Sbjct: 52  VQIFTTKKYWILFRIGPERRRKAGMPTGVYY 82

[Close]

BLAST of CmaCh16G003220 vs. Swiss-Prot
Match: YCF15_SOLBU (Putative uncharacterized protein ycf15 OS=Solanum bulbocastanum GN=ycf15-A PE=5 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1


Query: 96  IQIFTTKKHWILFQIGPERRRKAGMPTGVYY 127
           +QIFTTKK+WILF+IGPERRRKAGMPTGVYY
Sbjct: 52  VQIFTTKKYWILFRIGPERRRKAGMPTGVYY 82

[Close]

BLAST of CmaCh16G003220 vs. Swiss-Prot
Match: YCF15_SOLTU (Putative uncharacterized protein ycf15 OS=Solanum tuberosum GN=ycf15-A PE=5 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1


Query: 96  IQIFTTKKHWILFQIGPERRRKAGMPTGVYY 127
           +QIFTTKK+WILF+IGPERRRKAGMPTGVYY
Sbjct: 52  VQIFTTKKYWILFRIGPERRRKAGMPTGVYY 82

[Close]

BLAST of CmaCh16G003220 vs. TrEMBL
Match: A0A0A0KT06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000840 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-29
Identity = 74/101 (73.27%), Postives = 78/101 (77.23%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QQSGYELMHSRSVSKRAFGS-------------SYAGQVSN 87
           Q+S  EL HSRSV+K AFGS             SY GQVSN
Sbjct: 61  QRSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSN 101

[Close]

BLAST of CmaCh16G003220 vs. TrEMBL
Match: B9SNE5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0175590 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-17
Identity = 60/115 (52.17%), Postives = 73/115 (63.48%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
           MEGLIPYL HA++KQKP++ YRS SVGSSRSYHLLT  +    SSHRRTRS+FQPP  E 
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 60

Query: 61  LDQQSGYELMHSRSV--------SKRAFGS-----SYAGQVSNN---ANHGVVCH 96
           LDQ+ G E + S S+         K A GS     SY  Q+S +   AN+  + H
Sbjct: 61  LDQRQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMSGDHVKANNNGISH 115

[Close]

BLAST of CmaCh16G003220 vs. TrEMBL
Match: A0A067L7P7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16324 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.4e-16
Identity = 56/106 (52.83%), Postives = 67/106 (63.21%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTN-----DESSHRRTRSDFQPPRFE 60
           MEGLIPYL HAMKKQKP ++YRS S GSSRSYHLL         SSHRRTRSDFQP   +
Sbjct: 1   MEGLIPYLLHAMKKQKPHNNYRSFSAGSSRSYHLLVGGVDSVSGSSHRRTRSDFQPSNLD 60

Query: 61  YLDQQSGYELMHSRSVSKR-----------AFGSSYAG-QVSNNAN 90
           + +Q+SG E + S S+ KR            FG++Y   QV NN +
Sbjct: 61  FFEQRSG-ENLRSNSLIKRTANSPAVANGSTFGANYYNHQVKNNTS 105

[Close]

BLAST of CmaCh16G003220 vs. TrEMBL
Match: V4U9W4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029615mg PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-15
Identity = 47/70 (67.14%), Postives = 51/70 (72.86%), Query Frame = 1


Query: 1  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
          MEGLIPYL HAMKKQKP H YRS SVGSSRSYHLL   +    SSHRR RSDFQ P  E+
Sbjct: 1  MEGLIPYLVHAMKKQKPHHSYRSFSVGSSRSYHLLIGGDSFEGSSHRRARSDFQQPAVEF 60

Query: 61 LDQQSGYELM 67
            Q+SG E +
Sbjct: 61 PGQRSGAEFI 70

[Close]

BLAST of CmaCh16G003220 vs. TrEMBL
Match: B9SNE4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0175580 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-15
Identity = 51/99 (51.52%), Postives = 62/99 (62.63%), Query Frame = 1


Query: 1  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTN-----DESSHRRTRSDFQPPRFE 60
          MEGLIPY+ HA+KKQ+P   Y+S S GSSRSYHLL       + SSHRRTRS+FQPP  E
Sbjct: 1  MEGLIPYILHAIKKQRPHRTYKSFSEGSSRSYHLLIGSGDSINGSSHRRTRSEFQPPAME 60

Query: 61 YLDQQSGYELMHSRSVSKRAFGSSYAGQVS---NNANHG 92
           L+Q+S  E + S S+ KR+  S      S     A HG
Sbjct: 61 LLEQRSALEYVRSSSLRKRSVNSPTVASESKFGTTAYHG 99

[Close]

BLAST of CmaCh16G003220 vs. TAIR10
Match: AT3G19615.1 (AT3G19615.1 unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09
Identity = 42/88 (47.73%), Postives = 51/88 (57.95%), Query Frame = 1


Query: 1  MEGLIPYLFHAMKKQ-KPRH-DYRSQSVGSSRSYHLLTNDE--------SSHRRTRSDFQ 60
          MEGLIPYL HA+KK  KP H  YRS SVGSSRSY  L   +        SSHRRTRSD+ 
Sbjct: 1  MEGLIPYLIHAIKKDHKPDHQRYRSISVGSSRSYRPLMMGQDGSSSMQGSSHRRTRSDYN 60

Query: 61 P----PRFEYLDQQSGYELMHSRSVSKR 75
          P     +F+      G E ++  S S++
Sbjct: 61 PHVIMDKFDQRSSGFGQEFVNKDSSSQK 88

[Close]

BLAST of CmaCh16G003220 vs. NCBI nr
Match: gi|700197607|gb|KGN52765.1| (hypothetical protein Csa_4G000840 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 4.7e-29
Identity = 74/101 (73.27%), Postives = 78/101 (77.23%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QQSGYELMHSRSVSKRAFGS-------------SYAGQVSN 87
           Q+S  EL HSRSV+K AFGS             SY GQVSN
Sbjct: 61  QRSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSN 101

[Close]

BLAST of CmaCh16G003220 vs. NCBI nr
Match: gi|659108799|ref|XP_008454395.1| (PREDICTED: uncharacterized protein LOC103494810 [Cucumis melo])

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-28
Identity = 75/102 (73.53%), Postives = 78/102 (76.47%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QQ-SGYELMHSRSVSKRAFGS-------------SYAGQVSN 87
           QQ    EL HSRSV+K AFGS             SYAGQVSN
Sbjct: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSN 102

[Close]

BLAST of CmaCh16G003220 vs. NCBI nr
Match: gi|223533154|gb|EEF34912.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-17
Identity = 60/115 (52.17%), Postives = 73/115 (63.48%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
           MEGLIPYL HA++KQKP++ YRS SVGSSRSYHLLT  +    SSHRRTRS+FQPP  E 
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 60

Query: 61  LDQQSGYELMHSRSV--------SKRAFGS-----SYAGQVSNN---ANHGVVCH 96
           LDQ+ G E + S S+         K A GS     SY  Q+S +   AN+  + H
Sbjct: 61  LDQRQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMSGDHVKANNNGISH 115

[Close]

BLAST of CmaCh16G003220 vs. NCBI nr
Match: gi|1000949589|ref|XP_015579855.1| (PREDICTED: probable beta-D-xylosidase 5 isoform X2 [Ricinus communis])

HSP 1 Score: 95.5 bits (236), Expect = 7.0e-17
Identity = 60/115 (52.17%), Postives = 73/115 (63.48%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
           MEGLIPYL HA++KQKP++ YRS SVGSSRSYHLLT  +    SSHRRTRS+FQPP  E 
Sbjct: 795 MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 854

Query: 61  LDQQSGYELMHSRSV--------SKRAFGS-----SYAGQVSNN---ANHGVVCH 96
           LDQ+ G E + S S+         K A GS     SY  Q+S +   AN+  + H
Sbjct: 855 LDQRQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMSGDHVKANNNGISH 909

[Close]

BLAST of CmaCh16G003220 vs. NCBI nr
Match: gi|643738570|gb|KDP44491.1| (hypothetical protein JCGZ_16324 [Jatropha curcas])

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-16
Identity = 56/106 (52.83%), Postives = 67/106 (63.21%), Query Frame = 1


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTN-----DESSHRRTRSDFQPPRFE 60
           MEGLIPYL HAMKKQKP ++YRS S GSSRSYHLL         SSHRRTRSDFQP   +
Sbjct: 1   MEGLIPYLLHAMKKQKPHNNYRSFSAGSSRSYHLLVGGVDSVSGSSHRRTRSDFQPSNLD 60

Query: 61  YLDQQSGYELMHSRSVSKR-----------AFGSSYAG-QVSNNAN 90
           + +Q+SG E + S S+ KR            FG++Y   QV NN +
Sbjct: 61  FFEQRSG-ENLRSNSLIKRTANSPAVANGSTFGANYYNHQVKNNTS 105

The following BLAST results are available for this feature:

BLAST of CmaCh16G003220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YCF15_ATRBE	7.5e-11	90.32	Putative uncharacterized protein ycf15 OS=Atropa belladonna GN=ycf15-A PE=5 SV=1	[more]
YCF15_NICSY	7.5e-11	90.32	Putative uncharacterized protein ycf15 OS=Nicotiana sylvestris GN=ycf15-A PE=5 S...	[more]
YCF15_NICTO	7.5e-11	90.32	Putative uncharacterized protein ycf15 OS=Nicotiana tomentosiformis GN=ycf15-A P...	[more]
YCF15_SOLBU	7.5e-11	90.32	Putative uncharacterized protein ycf15 OS=Solanum bulbocastanum GN=ycf15-A PE=5 ...	[more]
YCF15_SOLTU	7.5e-11	90.32	Putative uncharacterized protein ycf15 OS=Solanum tuberosum GN=ycf15-A PE=5 SV=1	[more]

BLAST of CmaCh16G003220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT06_CUCSA	3.3e-29	73.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000840 PE=4 SV=1	[more]
B9SNE5_RICCO	4.9e-17	52.17	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0175590 PE=4 SV=1	[more]
A0A067L7P7_JATCU	5.4e-16	52.83	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16324 PE=4 SV=1	[more]
V4U9W4_9ROSI	4.6e-15	67.14	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029615mg PE=4 SV=1	[more]
B9SNE4_RICCO	4.6e-15	51.52	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0175580 PE=4 SV=1	[more]

BLAST of CmaCh16G003220 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19615.1	1.2e-09	47.73	unknown protein	[more]

BLAST of CmaCh16G003220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700197607\|gb\|KGN52765.1\|	4.7e-29	73.27	hypothetical protein Csa_4G000840 [Cucumis sativus]	[more]
gi\|659108799\|ref\|XP_008454395.1\|	2.3e-28	73.53	PREDICTED: uncharacterized protein LOC103494810 [Cucumis melo]	[more]
gi\|223533154\|gb\|EEF34912.1\|	7.0e-17	52.17	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000949589\|ref\|XP_015579855.1\|	7.0e-17	52.17	PREDICTED: probable beta-D-xylosidase 5 isoform X2 [Ricinus communis]	[more]
gi\|643738570\|gb\|KDP44491.1\|	7.7e-16	52.83	hypothetical protein JCGZ_16324 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019645	Uncharacterised_Ycf15

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042773	ATP synthesis coupled electron transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G003220.1	CmaCh16G003220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019645	Uncharacterised protein family Ycf15	PFAM	PF10705	Ycf15	coord: 96..126 score: 6.8
None	No IPR available	PANTHER	PTHR38370	FAMILY NOT NAMED	coord: 2..108 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G003220	Csa4G000840	Cucumber (Chinese Long) v2	cmacuB333
CmaCh16G003220	MELO3C018001	Melon (DHL92) v3.5.1	cmameB303
CmaCh16G003220	ClCG10G010430	Watermelon (Charleston Gray)	cmawcgB280
CmaCh16G003220	CSPI04G00380	Wild cucumber (PI 183967)	cmacpiB338
CmaCh16G003220	Cp4.1LG14g04490	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G003220	MELO3C018001.2	Melon (DHL92) v3.6.1	cmamedB354
CmaCh16G003220	CsaV3_4G000330	Cucumber (Chinese Long) v3	cmacucB0388
CmaCh16G003220	Cla97C10G193340	Watermelon (97103) v2	cmawmbB332
CmaCh16G003220	Bhi11G000949	Wax gourd	cmawgoB0410
CmaCh16G003220	Carg19684	Silver-seed gourd	carcmaB0406

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G003220	Cucurbita pepo (Zucchini)	cmacpeB351
CmaCh16G003220	Bottle gourd (USVL1VR-Ls)	cmalsiB304
CmaCh16G003220	Bottle gourd (USVL1VR-Ls)	cmalsiB307
CmaCh16G003220	Cucumber (Gy14) v2	cgybcmaB494
CmaCh16G003220	Cucumber (Gy14) v2	cgybcmaB750
CmaCh16G003220	Melon (DHL92) v3.6.1	cmamedB331
CmaCh16G003220	Melon (DHL92) v3.6.1	cmamedB363
CmaCh16G003220	Silver-seed gourd	carcmaB0526
CmaCh16G003220	Cucumber (Chinese Long) v3	cmacucB0413
CmaCh16G003220	Cucumber (Chinese Long) v3	cmacucB0414
CmaCh16G003220	Watermelon (97103) v2	cmawmbB342
CmaCh16G003220	Wax gourd	cmawgoB0446
CmaCh16G003220	Cucurbita maxima (Rimu)	cmacmaB135
CmaCh16G003220	Cucurbita maxima (Rimu)	cmacmaB340
CmaCh16G003220	Cucurbita maxima (Rimu)	cmacmaB351
CmaCh16G003220	Cucumber (Gy14) v1	cgycmaB0226
CmaCh16G003220	Cucumber (Gy14) v1	cgycmaB0197
CmaCh16G003220	Cucumber (Gy14) v1	cgycmaB0623
CmaCh16G003220	Cucurbita moschata (Rifu)	cmacmoB318
CmaCh16G003220	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G003220	Cucurbita moschata (Rifu)	cmacmoB338
CmaCh16G003220	Wild cucumber (PI 183967)	cmacpiB351
CmaCh16G003220	Cucumber (Chinese Long) v2	cmacuB347
CmaCh16G003220	Cucumber (Chinese Long) v2	cmacuB348
CmaCh16G003220	Melon (DHL92) v3.5.1	cmameB287
CmaCh16G003220	Melon (DHL92) v3.5.1	cmameB311
CmaCh16G003220	Watermelon (Charleston Gray)	cmawcgB293
CmaCh16G003220	Watermelon (97103) v1	cmawmB293