Carg19684 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19684
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NADH dehydrogenase subunit 4L
Location	Cucurbita_argyrosperma_scaffold_133 : 149232 .. 150051 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCCGTAGGTTCGAGCCGGAGCTACCATCTCTTGACTAACGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGGGTGCGTTTGGATCATCTTATGCTGGCCAGGTTTCAAATAATGGTAACCTTCCTCGCTGAGAAAATGGCTAAGTGGGAAGGATTATTCAGAAAATTAATGATTTGTAAAACGTTATTATTTTTATTTTATTTTATTTTATTGTTTTAATTTGTTTGATTGTATTGGTTTGGTGAAGAACAATGTGTAAATTAAAGTGGTGGGTCTCCATGAAATGATGTGAACAGCCATTTTCTATGCCAATAAGATGTTTTTTTTTTTAAAGATTAATTAAAAAAAAAAAAAAAAAAAAAGTCGTCAAAGGTGAGTTCAGCTCAACATGAAATTTAGTGGGCAGCCATCTTCTTTGAATTTGACAATGGTACATTGATCGGTTCGACGTACGGTTCTTAACTTATTGGAGTTTCTATGATTATCTCTATTTTAGGTATTCGGGGAATCCTCCTCAATAGACCAAGTATTCCTATTATGTCAATGTCAATTGAACCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTTCGTTTGTTCGGATGATATGATGGGTCAATCATTTATTTCATTGGTTCCAACGGTGGTAGCTGCGGAATCTGCTATT

mRNA sequence

ATGGAGGGGTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCCGTAGGTTCGAGCCGGAGCTACCATCTCTTGACTAACGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGGGTGCGTTTGGATCATCTTATGCTGGCCAGGTTTCAAATAATGGTATTCGGGGAATCCTCCTCAATAGACCAAGTATTCCTATTATGTCAATGTCAATTGAACCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTTCGTTTGTTCGGATGATATGATGGGTCAATCATTTATTTCATTGGTTCCAACGGTGGTAGCTGCGGAATCTGCTATT

Coding sequence (CDS)

ATGGAGGGGTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCCGTAGGTTCGAGCCGGAGCTACCATCTCTTGACTAACGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGGGTGCGTTTGGATCATCTTATGCTGGCCAGGTTTCAAATAATGGTATTCGGGGAATCCTCCTCAATAGACCAAGTATTCCTATTATGTCAATGTCAATTGAACCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTTCGTTTGTTCGGATGATATGATGGGTCAATCATTTATTTCATTGGTTCCAACGGTGGTAGCTGCGGAATCTGCTATT

Protein sequence

MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI

Homology

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: KGN52765.1 (hypothetical protein Csa_4G000840 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 2.8e-29
Identity = 75/101 (74.26%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QRSGHELMHSRSVSKGAFGS-------------SYAGQVSN 87
           QRS  EL HSRSV+K AFGS             SY GQVSN
Sbjct: 61  QRSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSN 101

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: XP_015579855.1 (probable beta-D-xylosidase 5 isoform X2 [Ricinus communis])

HSP 1 Score: 96.3 bits (238), Expect = 9.3e-17
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
           MEGLIPYL HA++KQKP++ YRS SVGSSRSYHLLT  +    SSHRRTRS+FQPP  E 
Sbjct: 795 MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 854

Query: 61  LDQRSGHELMHSRSV--------SKGAFGS-----SYAGQVSNNGIR 91
           LDQR G E + S S+         K A GS     SY  Q+S + ++
Sbjct: 855 LDQRQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMSGDHVK 901

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: XP_023771920.1 (uncharacterized protein LOC111920565 [Lactuca sativa])

HSP 1 Score: 96.3 bits (238), Expect = 9.3e-17
Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL-----TNDESSHRRTRSDFQPPRFE 60
           MEGLIP+L HAMKKQ+P+++YRS+SVGS+RSYH+L     T D SSHRRTRS+FQ P  E
Sbjct: 1   MEGLIPFLMHAMKKQRPQNNYRSRSVGSTRSYHVLVGADATVDNSSHRRTRSEFQSPTNE 60

Query: 61  YLDQRSGHELM-----HSRSVSKGAFGSSYAGQVSNNGIRGI 93
           +++QRSG   +     + RS + G   +SY G     G+ G+
Sbjct: 61  FMEQRSGFGCIPQAKSYKRSSTTGLTPNSYQGVPKTKGLHGV 102

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: EEF34912.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 96.3 bits (238), Expect = 9.3e-17
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
           MEGLIPYL HA++KQKP++ YRS SVGSSRSYHLLT  +    SSHRRTRS+FQPP  E 
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 60

Query: 61  LDQRSGHELMHSRSV--------SKGAFGS-----SYAGQVSNNGIR 91
           LDQR G E + S S+         K A GS     SY  Q+S + ++
Sbjct: 61  LDQRQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMSGDHVK 107

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: XP_022763511.1 (uncharacterized protein LOC111309019 [Durio zibethinus])

HSP 1 Score: 94.7 bits (234), Expect = 2.7e-16
Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 0


Query: 1  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTN-------DESSHRRTRSDFQPPR 60
          MEGLIPYL  AM+KQKP H YRS S+GSSRSYHLL         + SSHRRTRSDFQPP 
Sbjct: 1  MEGLIPYLIRAMRKQKPSHRYRSMSMGSSRSYHLLIGQPQQESVEGSSHRRTRSDFQPPT 60

Query: 61 FEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNGI 90
           E+ +QRSG + + ++S + G+   +Y  +V+ + +
Sbjct: 61 VEFFEQRSGLDFLSAKSYNNGS-SVNYPSRVAGSNV 95

[Close]

BLAST of Carg19684 vs. TAIR10
Match: ATMG00650.1 (NADH dehydrogenase subunit 4L)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-18
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 84  VSNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAE 143
           +S  GIRGILLNR +IPIMSM IE MLLAVNSNFLVF V SDDMMGQ F SLVPTV AAE
Sbjct: 13  ISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQVFASLVPTVAAAE 72

Query: 144 SAI 147
           SAI
Sbjct: 73  SAI 75

[Close]

BLAST of Carg19684 vs. TAIR10
Match: AT3G19615.1 (unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.0e-10
Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 1  MEGLIPYLFHAMKK-QKPRHD-YRSQSVGSSRSYHLLTNDE--------SSHRRTRSDFQ 60
          MEGLIPYL HA+KK  KP H  YRS SVGSSRSY  L   +        SSHRRTRSD+ 
Sbjct: 1  MEGLIPYLIHAIKKDHKPDHQRYRSISVGSSRSYRPLMMGQDGSSSMQGSSHRRTRSDYN 60

Query: 61 P-PRFEYLDQRS---GHELMHSRSVSK 74
          P    +  DQRS   G E ++  S S+
Sbjct: 61 PHVIMDKFDQRSSGFGQEFVNKDSSSQ 87

[Close]

BLAST of Carg19684 vs. Swiss-Prot
Match: sp|Q04614|NU4LM_ARATH (NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.6e-12
Identity = 45/59 (76.27%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           GI GILLNR +I IM MSIE MLLAVNSNFLVF V  DDMMGQ F  LV TV AAESAI
Sbjct: 17  GIWGILLNRRNILIMLMSIELMLLAVNSNFLVFSVSLDDMMGQVFALLVLTVAAAESAI 75

[Close]

BLAST of Carg19684 vs. Swiss-Prot
Match: sp|P26851|NU4LM_MARPO (NADH-ubiquinone oxidoreductase chain 4L OS=Marchantia polymorpha OX=3197 GN=ND4L PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 42/59 (71.19%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           GI GI LNR +I IM MSIE MLLAVN NFLVF V  DDMMGQ F   V TV AAESAI
Sbjct: 17  GIWGIFLNRKNILIMLMSIELMLLAVNLNFLVFSVYLDDMMGQLFALFVLTVAAAESAI 75

[Close]

BLAST of Carg19684 vs. Swiss-Prot
Match: sp|Q37627|NU4LM_PROWI (NADH-ubiquinone oxidoreductase chain 4L OS=Prototheca wickerhamii OX=3111 GN=ND4L PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-09
Identity = 38/59 (64.41%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           GI GI LNR +I +M MSIE MLLAVN NFL+F V  DD +GQ F  L+ TV AAESAI
Sbjct: 17  GIWGIFLNRKNIIVMLMSIELMLLAVNLNFLLFSVYIDDCIGQLFALLILTVAAAESAI 75

[Close]

BLAST of Carg19684 vs. Swiss-Prot
Match: sp|B8GNZ5|NUOK_THISH (NADH-quinone oxidoreductase subunit K OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=nuoK PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.5e-07
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 89  IRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           I GI LNR ++ I+ MSIE MLLAVN NF+ F   S D+ GQ F+  + TV AAE+AI
Sbjct: 19  IAGIFLNRKNVIILLMSIELMLLAVNMNFVAFSHFSGDLAGQVFVFFILTVAAAEAAI 76

[Close]

BLAST of Carg19684 vs. Swiss-Prot
Match: sp|Q0AHJ0|NUOK_NITEC (NADH-quinone oxidoreductase subunit K OS=Nitrosomonas eutropha (strain C91) OX=335283 GN=nuoK PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           G+ GI LNR ++ I+ MSIE MLLAVN NF+ F     D+ GQ F+  + TV AAE+AI
Sbjct: 18  GVVGIFLNRKNVIILLMSIELMLLAVNINFVAFSYYLQDIAGQIFVFFILTVAAAEAAI 76

[Close]

BLAST of Carg19684 vs. TrEMBL
Match: tr|A0A0A0KT06|A0A0A0KT06_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000840 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-29
Identity = 75/101 (74.26%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QRSGHELMHSRSVSKGAFGS-------------SYAGQVSN 87
           QRS  EL HSRSV+K AFGS             SY GQVSN
Sbjct: 61  QRSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSN 101

[Close]

BLAST of Carg19684 vs. TrEMBL
Match: tr|B9SNE5|B9SNE5_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0175590 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.1e-17
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
           MEGLIPYL HA++KQKP++ YRS SVGSSRSYHLLT  +    SSHRRTRS+FQPP  E 
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 60

Query: 61  LDQRSGHELMHSRSV--------SKGAFGS-----SYAGQVSNNGIR 91
           LDQR G E + S S+         K A GS     SY  Q+S + ++
Sbjct: 61  LDQRQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMSGDHVK 107

[Close]

BLAST of Carg19684 vs. TrEMBL
Match: tr|A0A2P5RHV6|A0A2P5RHV6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD16677 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-16
Identity = 52/60 (86.67%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 87  NGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 146
           NGIRGILLNR +IPIMSM IE MLLAVNSNFLVFFV  DDMMGQSF SLVPTV AAESAI
Sbjct: 136 NGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFFVSLDDMMGQSFASLVPTVAAAESAI 195

[Close]

BLAST of Carg19684 vs. TrEMBL
Match: tr|A0A2H5N8A2|A0A2H5N8A2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_279730 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.0e-16
Identity = 52/59 (88.14%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           GIRGILLNR +IPIMSMSIE MLLAVNSNFLVF V SDDMMGQSF SLVPTV AAESAI
Sbjct: 49  GIRGILLNRRNIPIMSMSIESMLLAVNSNFLVFSVSSDDMMGQSFASLVPTVAAAESAI 107

[Close]

BLAST of Carg19684 vs. TrEMBL
Match: tr|A0A2G2V3B4|A0A2G2V3B4_CAPBA (NADH-ubiquinone oxidoreductase chain 4L OS=Capsicum baccatum OX=33114 GN=CQW23_32915 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.0e-16
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 0


Query: 85  SNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAES 144
           +N GIRGILLNR +IPIMSM IE MLLAVNSNFLVF + SDDMMGQSF SLVPTV AAES
Sbjct: 132 ANKGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSISSDDMMGQSFASLVPTVAAAES 191

Query: 145 AI 147
           AI
Sbjct: 192 AI 193

The following BLAST results are available for this feature:

BLAST of Carg19684 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52765.1	2.8e-29	74.26	hypothetical protein Csa_4G000840 [Cucumis sativus]	[more]
XP_015579855.1	9.3e-17	54.21	probable beta-D-xylosidase 5 isoform X2 [Ricinus communis]	[more]
XP_023771920.1	9.3e-17	50.98	uncharacterized protein LOC111920565 [Lactuca sativa]	[more]
EEF34912.1	9.3e-17	54.21	conserved hypothetical protein [Ricinus communis]	[more]
XP_022763511.1	2.7e-16	52.08	uncharacterized protein LOC111309019 [Durio zibethinus]	[more]

BLAST of Carg19684 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00650.1	2.1e-18	80.95	NADH dehydrogenase subunit 4L	[more]
AT3G19615.1	6.0e-10	51.72	unknown protein	[more]

BLAST of Carg19684 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q04614\|NU4LM_ARATH	3.6e-12	76.27	NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L ...	[more]
sp\|P26851\|NU4LM_MARPO	1.5e-10	71.19	NADH-ubiquinone oxidoreductase chain 4L OS=Marchantia polymorpha OX=3197 GN=ND4L...	[more]
sp\|Q37627\|NU4LM_PROWI	2.8e-09	64.41	NADH-ubiquinone oxidoreductase chain 4L OS=Prototheca wickerhamii OX=3111 GN=ND4...	[more]
sp\|B8GNZ5\|NUOK_THISH	4.5e-07	55.17	NADH-quinone oxidoreductase subunit K OS=Thioalkalivibrio sulfidiphilus (strain ...	[more]
sp\|Q0AHJ0\|NUOK_NITEC	1.0e-06	52.54	NADH-quinone oxidoreductase subunit K OS=Nitrosomonas eutropha (strain C91) OX=3...	[more]

BLAST of Carg19684 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KT06\|A0A0A0KT06_CUCSA	1.8e-29	74.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000840 PE=4 SV=1	[more]
tr\|B9SNE5\|B9SNE5_RICCO	6.1e-17	54.21	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0175590 PE=4 SV=1	[more]
tr\|A0A2P5RHV6\|A0A2P5RHV6_GOSBA	1.8e-16	86.67	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD16677 PE=3 SV...	[more]
tr\|A0A2H5N8A2\|A0A2H5N8A2_CITUN	4.0e-16	88.14	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_279730 PE=3 SV=1	[more]
tr\|A0A2G2V3B4\|A0A2G2V3B4_CAPBA	4.0e-16	82.26	NADH-ubiquinone oxidoreductase chain 4L OS=Capsicum baccatum OX=33114 GN=CQW23_3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016651	oxidoreductase activity, acting on NAD(P)H

Vocabulary: **Biological Process**
Term	Definition
GO:0042773	ATP synthesis coupled electron transport
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR001133	NADH_UbQ_OxRdtase_chain4L/K

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19684-RA	Carg19684-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..49
None	No IPR available	PANTHER	PTHR11434:SF5	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4L	coord: 84..146
IPR001133	NADH-ubiquinone oxidoreductase chain 4L/K	PANTHER	PTHR11434	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT ND4L	coord: 84..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19684	Csa4G000840	Cucumber (Chinese Long) v2	carcuB0322
Carg19684	MELO3C018001	Melon (DHL92) v3.5.1	carmeB0297
Carg19684	ClCG10G010430	Watermelon (Charleston Gray)	carwcgB0287
Carg19684	CSPI04G00380	Wild cucumber (PI 183967)	carcpiB0328
Carg19684	CmaCh16G003220	Cucurbita maxima (Rimu)	carcmaB0406
Carg19684	CmoCh16G003400	Cucurbita moschata (Rifu)	carcmoB0402
Carg19684	Cp4.1LG14g04490	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19684	MELO3C018001.2	Melon (DHL92) v3.6.1	carmedB0308
Carg19684	CsaV3_4G000330	Cucumber (Chinese Long) v3	carcucB0328
Carg19684	Cla97C10G193340	Watermelon (97103) v2	carwmbB0302
Carg19684	Bhi11G000949	Wax gourd	carwgoB0381

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19684	Silver-seed gourd	carcarB324
Carg19684	Cucumber (Gy14) v2	carcgybB0309
Carg19684	Cucumber (Gy14) v1	carcgyB0343
Carg19684	Cucumber (Gy14) v1	carcgyB0344
Carg19684	Cucumber (Gy14) v1	carcgyB0348
Carg19684	Cucurbita maxima (Rimu)	carcmaB0405
Carg19684	Cucurbita maxima (Rimu)	carcmaB0407
Carg19684	Cucurbita maxima (Rimu)	carcmaB0408
Carg19684	Cucurbita moschata (Rifu)	carcmoB0401
Carg19684	Cucurbita moschata (Rifu)	carcmoB0403
Carg19684	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19684	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19684	Wild cucumber (PI 183967)	carcpiB0329
Carg19684	Cucumber (Chinese Long) v2	carcuB0323
Carg19684	Cucumber (Chinese Long) v3	carcucB0329
Carg19684	Bottle gourd (USVL1VR-Ls)	carlsiB269
Carg19684	Melon (DHL92) v3.5.1	carmeB0295
Carg19684	Melon (DHL92) v3.6.1	carmedB0306
Carg19684	Watermelon (Charleston Gray)	carwcgB0288
Carg19684	Watermelon (97103) v1	carwmB0287
Carg19684	Watermelon (97103) v2	carwmbB0303
Carg19684	Watermelon (97103) v2	carwmbB0305
Carg19684	Wax gourd	carwgoB0383