CmaCh15G012660 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATAGACCATTTCAAACAAACCCCCCAAAAAAGAAACTTTGAAACCAGAGATTCACACGCCATTGCAGTTGCAACGTTAAGGCCTGGAGACCAAATGGGCGCTATAAAATCCAGAGCCTCATTTGATTGAGAGCCACACCGCCATTGCCACGCCGTCGTCGCTGTCTCCGGAACTGTCAACTGGCCGGTGGCCCTCAACCACCCCTCCCTTTTGACAGCTTCAAATCATCAACTCGGCCTATTTAATCTCTCTCTGCTGCGGCTCTCCGGAGCCCCTGCAGGAGGTTTCGTCTCAACTTCTTACATTTCTGAGAGACGTTGCAGAGAGAGATTTCGTTCTTCCATTTCAAATTATCTTGTTTTTTCACCTAGAAGCTTCTTCTTCCTTTAACAATGGCGGTCGTTGCTAATAAGATCCCCTTTGGCGTTTTATTTGGTGTTGTTTTTGTTTTGGCTATGCTTCTCCCTGCTTCTGCTCAATCTCTGGCTCCGGCCCAACCTCCTGCTGCTAGCGATGGTTAGTTCTTCTTCTTCTTCTTCCTCATTTGAATCATGGTTTTCAAGTTCTCCACCTATGAATTTCATAAATGATGACAATTATTGTTATGCTAATTTGCAGGGACAAGCATAGACCAGGGGATTGCCTATGTACTGATGCTGTTGGCCTTGGTGCTCACTTACATTATCCATTCAGCCGACCTTTCTATCAGTTTCTAAATTTCATCCACAAAATAACTAGATTCAGATATCACAGAGCTGGAATTTAAAAATGGGGTTCAAGAATTTATCACTTTT CCATAGACCATTTCAAACAAACCCCCCAAAAAAGAAACTTTGAAACCAGAGATTCACACGCCATTGCAGTTGCAACGTTAAGGCCTGGAGACCAAATGGGCGCTATAAAATCCAGAGCCTCATTTGATTGAGAGCCACACCGCCATTGCCACGCCGTCGTCGCTGTCTCCGGAACTGTCAACTGGCCGGTGGCCCTCAACCACCCCTCCCTTTTGACAGCTTCAAATCATCAACTCGGCCTATTTAATCTCTCTCTGCTGCGGCTCTCCGGAGCCCCTGCAGGAGGTTTCGTCTCAACTTCTTACATTTCTGAGAGACGTTGCAGAGAGAGATTTCGTTCTTCCATTTCAAATTATCTTGTTTTTTCACCTAGAAGCTTCTTCTTCCTTTAACAATGGCGGTCGTTGCTAATAAGATCCCCTTTGGCGTTTTATTTGGTGTTGTTTTTGTTTTGGCTATGCTTCTCCCTGCTTCTGCTCAATCTCTGGCTCCGGCCCAACCTCCTGCTGCTAGCGATGGGACAAGCATAGACCAGGGGATTGCCTATGTACTGATGCTGTTGGCCTTGGTGCTCACTTACATTATCCATTCAGCCGACCTTTCTATCAGTTTCTAAATTTCATCCACAAAATAACTAGATTCAGATATCACAGAGCTGGAATTTAAAAATGGGGTTCAAGAATTTATCACTTTT ATGGCGGTCGTTGCTAATAAGATCCCCTTTGGCGTTTTATTTGGTGTTGTTTTTGTTTTGGCTATGCTTCTCCCTGCTTCTGCTCAATCTCTGGCTCCGGCCCAACCTCCTGCTGCTAGCGATGGGACAAGCATAGACCAGGGGATTGCCTATGTACTGATGCTGTTGGCCTTGGTGCTCACTTACATTATCCATTCAGCCGACCTTTCTATCAGTTTCTAA MAVVANKIPFGVLFGVVFVLAMLLPASAQSLAPAQPPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF
BLAST of CmaCh15G012660 vs. Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 8.2e-10 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1
BLAST of CmaCh15G012660 vs. Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.1e-09 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1
BLAST of CmaCh15G012660 vs. Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 5.0e-07 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TrEMBL
Match: A0A0A0KK44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G151510 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 3.7e-17 Identity = 56/73 (76.71%), Postives = 60/73 (82.19%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TrEMBL
Match: A0A0D9VEH9_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.3e-10 Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TrEMBL
Match: B9RCN6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1691010 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 7.5e-10 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TrEMBL
Match: A0A067JZA6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20491 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.3e-09 Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TrEMBL
Match: A0A0E0PYE4_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.2e-09 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TAIR10
Match: AT2G46330.1 (AT2G46330.1 arabinogalactan protein 16) HSP 1 Score: 63.9 bits (154), Expect = 4.6e-11 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TAIR10
Match: AT5G24105.1 (AT5G24105.1 arabinogalactan protein 41) HSP 1 Score: 62.0 bits (149), Expect = 1.8e-10 Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TAIR10
Match: AT3G61640.1 (AT3G61640.1 arabinogalactan protein 20) HSP 1 Score: 62.0 bits (149), Expect = 1.8e-10 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1
BLAST of CmaCh15G012660 vs. TAIR10
Match: AT5G53250.1 (AT5G53250.1 arabinogalactan protein 22) HSP 1 Score: 54.7 bits (130), Expect = 2.8e-08 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
BLAST of CmaCh15G012660 vs. NCBI nr
Match: gi|659074005|ref|XP_008437371.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-17 Identity = 57/73 (78.08%), Postives = 60/73 (82.19%), Query Frame = 1
BLAST of CmaCh15G012660 vs. NCBI nr
Match: gi|449452418|ref|XP_004143956.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis sativus]) HSP 1 Score: 95.1 bits (235), Expect = 5.3e-17 Identity = 56/73 (76.71%), Postives = 60/73 (82.19%), Query Frame = 1
BLAST of CmaCh15G012660 vs. NCBI nr
Match: gi|255537709|ref|XP_002509921.1| (PREDICTED: arabinogalactan peptide 22 [Ricinus communis]) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-09 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1
BLAST of CmaCh15G012660 vs. NCBI nr
Match: gi|802735165|ref|XP_012086771.1| (PREDICTED: arabinogalactan peptide 20-like [Jatropha curcas]) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-09 Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = 1
BLAST of CmaCh15G012660 vs. NCBI nr
Match: gi|502139093|ref|XP_004503642.1| (PREDICTED: arabinogalactan peptide 16-like [Cicer arietinum]) HSP 1 Score: 69.7 bits (169), Expect = 2.4e-09 Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |