CmaCh15G006740 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G006740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRING/U-box superfamily protein, putative
LocationCma_Chr15 : 3232077 .. 3232757 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGGATACTCTCTACGAATACCAGATATGGCAACCTGAAGAAGGTGAAGATGATATTAATTTTGCCATTTCCAATTCTCACTTGCTTCCCTGTGACTGTTTCCTTTTCCACCTTCGCTTTCGCCATGTTCTTCAGTCAAATCACTCTCAAGAATTTCACACTCTCCTAAATTCCTCCCTATCTTCGTCCTTGATACCTTGCGATGTCTTTCTCGCCAGTGGCTCCAGTATCCTGATTGCTGTTTTCTCCGGCACTGGCGTCGCGCAAGACTTCTTGGACGCGGCAGTACCGGACGTTCTGTCCGTCGCGGCTGATATCGTTTGCAATCCTCTTAATGCTGGCCGTCGGATATTTCCGTTGGCGGTGTCTGTTTTAGTCGTTTCGCTGTACAATGAACGCGAGGAAATTGGGCGAGTTTTGCGGGAATCATCAGAGCAAGCGTTTAAAGCGTCGCCGGCGTGTGCGTCGGCTATCGAAGGTTTGAAGAACTTGGAGATTGATGTCCATGGAGAGTTGTTGATCGGAGAATGCAGAATATGTTTGGATGAATTGATGAACGGAATGGAAGTTACGCAATTACCGTGCGCTCATTTTTACCACAGAGAGTGTATCGTCAAATGGCTAGAGACGAGTCATTTGTGCCCGTTGTGCCGCTACGCAATGCCATTGAGCTGA

mRNA sequence

ATGGCCATGGATACTCTCTACGAATACCAGATATGGCAACCTGAAGAAGGTGAAGATGATATTAATTTTGCCATTTCCAATTCTCACTTGCTTCCCTGTGACTGTTTCCTTTTCCACCTTCGCTTTCGCCATGTTCTTCAGTCAAATCACTCTCAAGAATTTCACACTCTCCTAAATTCCTCCCTATCTTCGTCCTTGATACCTTGCGATGTCTTTCTCGCCAGTGGCTCCAGTATCCTGATTGCTGTTTTCTCCGGCACTGGCGTCGCGCAAGACTTCTTGGACGCGGCAGTACCGGACGTTCTGTCCGTCGCGGCTGATATCGTTTGCAATCCTCTTAATGCTGGCCGTCGGATATTTCCGTTGGCGGTGTCTGTTTTAGTCGTTTCGCTGTACAATGAACGCGAGGAAATTGGGCGAGTTTTGCGGGAATCATCAGAGCAAGCGTTTAAAGCGTCGCCGGCGTGTGCGTCGGCTATCGAAGGTTTGAAGAACTTGGAGATTGATGTCCATGGAGAGTTGTTGATCGGAGAATGCAGAATATGTTTGGATGAATTGATGAACGGAATGGAAGTTACGCAATTACCGTGCGCTCATTTTTACCACAGAGAGTGTATCGTCAAATGGCTAGAGACGAGTCATTTGTGCCCGTTGTGCCGCTACGCAATGCCATTGAGCTGA

Coding sequence (CDS)

ATGGCCATGGATACTCTCTACGAATACCAGATATGGCAACCTGAAGAAGGTGAAGATGATATTAATTTTGCCATTTCCAATTCTCACTTGCTTCCCTGTGACTGTTTCCTTTTCCACCTTCGCTTTCGCCATGTTCTTCAGTCAAATCACTCTCAAGAATTTCACACTCTCCTAAATTCCTCCCTATCTTCGTCCTTGATACCTTGCGATGTCTTTCTCGCCAGTGGCTCCAGTATCCTGATTGCTGTTTTCTCCGGCACTGGCGTCGCGCAAGACTTCTTGGACGCGGCAGTACCGGACGTTCTGTCCGTCGCGGCTGATATCGTTTGCAATCCTCTTAATGCTGGCCGTCGGATATTTCCGTTGGCGGTGTCTGTTTTAGTCGTTTCGCTGTACAATGAACGCGAGGAAATTGGGCGAGTTTTGCGGGAATCATCAGAGCAAGCGTTTAAAGCGTCGCCGGCGTGTGCGTCGGCTATCGAAGGTTTGAAGAACTTGGAGATTGATGTCCATGGAGAGTTGTTGATCGGAGAATGCAGAATATGTTTGGATGAATTGATGAACGGAATGGAAGTTACGCAATTACCGTGCGCTCATTTTTACCACAGAGAGTGTATCGTCAAATGGCTAGAGACGAGTCATTTGTGCCCGTTGTGCCGCTACGCAATGCCATTGAGCTGA

Protein sequence

MAMDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNSSLSSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRRIFPLAVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECRICLDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMPLS
Homology
[Close]
BLAST of CmaCh15G006740 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 1 

Query: 136 EEIGRVLRESSEQAFKASPACASAIEGLKNLEI---DVHGELLIGECRICLDELMNGMEV 195
           E++ + L E+    +   PA  SAIE L  + I   +++ E    +C +C+D+   G E 
Sbjct: 180 EQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEF--NQCAVCMDDFEEGTEA 239

Query: 196 TQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
            Q+PC H YH++C++ WLE  + CP+CR+ +P
Sbjct: 240 KQMPCKHLYHKDCLLPWLELHNSCPVCRHELP 269

[Close]
BLAST of CmaCh15G006740 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.2e-12
Identity = 30/92 (32.61%), Postives = 57/92 (61.96%), Query Frame = 1 

Query: 136 EEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELL---IGECRICLDELMNGMEV 195
           E++ + L E+    +   PA  SAI+ L  +++    ++L   + +C +C+DE  +G +V
Sbjct: 172 EQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTK--DMLKSEMNQCAVCMDEFEDGSDV 231

Query: 196 TQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
            Q+PC H +H++C++ WLE  + CP+CR+ +P
Sbjct: 232 KQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 261

[Close]
BLAST of CmaCh15G006740 vs. Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 29/72 (40.28%), Postives = 42/72 (58.33%), Query Frame = 1 

Query: 152 ASPACASAIEGLKNLEIDVHGELLIGECRICLDELMNGMEVTQLPCAHFYHRECIVKWLE 211
           A PA  SAIE L+  E+      ++  C +C D ++ G    +LPC H YH +CIV WL 
Sbjct: 230 APPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLG 289

Query: 212 TSHLCPLCRYAM 224
           T + CP+CR+ +
Sbjct: 290 TRNSCPVCRFQL 301

[Close]
BLAST of CmaCh15G006740 vs. Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 1 

Query: 115 AGRRIFPLAVSVLVVSLYNER--EEIGRVLRESSEQAFKAS---PACASAIEGLKNLEI- 174
           +G R  P +VS +++    ER  E++ ++  E+S      S   PA  SAIE L  +EI 
Sbjct: 132 SGLRPLPDSVSEILMGSGFERLLEQLSQI--EASATGIGRSGNPPASKSAIESLPRVEIS 191

Query: 175 DVHGELLIGE---CRICLDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
           D H    IG    C +C +      E  ++PC H +H +CIV WL   + CP+CR+ +P
Sbjct: 192 DCH----IGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELP 244

[Close]
BLAST of CmaCh15G006740 vs. Swiss-Prot
Match: R126B_XENLA (E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.2e-08
Identity = 25/70 (35.71%), Postives = 37/70 (52.86%), Query Frame = 1 

Query: 154 PACASAIEGLKNLEIDVHGELLIGECRICLDELMNGMEVTQLPCAHFYHRECIVKWLETS 213
           PA    I+ L  ++I         EC +C ++   G  V QLPC H +H +CI+ WLE  
Sbjct: 203 PADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQH 262

Query: 214 HLCPLCRYAM 224
             CP+CR ++
Sbjct: 263 DTCPVCRKSL 272

[Close]
BLAST of CmaCh15G006740 vs. TrEMBL
Match: A0A0A0KDU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G385070 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.4e-107
Identity = 194/226 (85.84%), Postives = 204/226 (90.27%), Query Frame = 1 

Query: 1   MAMDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNS 60
           MAMDTLY+Y IWQPEEGEDD+N  ISNSHLLPC+CFLFHL FRH+LQSNHSQ+FH LLNS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQFHYLLNS 60

Query: 61  SLSSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRRIF 120
           SLSS LIPCDVF A+ SSILIAVFSGTGVAQDFLD AVPDVLSVAADI CNPLNAGR I 
Sbjct: 61  SLSSFLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECR 180
           PLAVSVLVVS YNER+EIGRVLRESS QAFK  PA   AIEGLK +EIDV GELLIGECR
Sbjct: 121 PLAVSVLVVSPYNERQEIGRVLRESSPQAFKTLPASEMAIEGLKKVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVT+LPCAH YHR+CIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]
BLAST of CmaCh15G006740 vs. TrEMBL
Match: M5XI10_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021670mg PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.4e-44
Identity = 95/222 (42.79%), Postives = 137/222 (61.71%), Query Frame = 1 

Query: 3   MDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNSSL 62
           M+T+Y+Y I Q E+     N  +  +HLL CDCF+F L F H L+    Q+ +  LNS  
Sbjct: 1   METIYQYSISQVEQQ----NQVLPTTHLLACDCFIFRLDFTHQLKLCFPQDLNIPLNSIQ 60

Query: 63  SSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRRIFPL 122
            S  +P DVF +     +  V SG+GV+ DF+   +P+V S A D+   P NAG RI PL
Sbjct: 61  ESFFVPFDVFFSHTQETIQTVLSGSGVSMDFVHVLLPEVHSFAMDVAQEPANAGPRIVPL 120

Query: 123 AVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECRIC 182
            ++VL V+ +++R++I R + ES  Q F   PA  S+I GLK ++ID     +  EC IC
Sbjct: 121 VLAVLAVTPFDDRDQIERAIMESG-QVFNPVPAAKSSIAGLKKVKID--NLSVTKECSIC 180

Query: 183 LDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
           L+E   G+EV  +PC+H YH++CIV+WL+ SHLCP CR+ +P
Sbjct: 181 LEEFSAGLEVVLMPCSHLYHKDCIVEWLKRSHLCPYCRFKLP 215

[Close]
BLAST of CmaCh15G006740 vs. TrEMBL
Match: B9GU33_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08360g PE=4 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35
Identity = 84/207 (40.58%), Postives = 125/207 (60.39%), Query Frame = 1 

Query: 22  NFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNSSLSSSLIPCDVFLA--SGSSI 81
           N   +NS     D  + HL+F HVL+  + +     LN++  S L P  +F +  +  SI
Sbjct: 8   NVDSNNSTAPTTDAIIIHLQFSHVLELCYPETIQIPLNTTNESHLFPRQLFSSHVNRESI 67

Query: 82  LIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGR-RIFPLAVSVLVVSLYNEREEI 141
           +  + S  G + DF+++A PD+ S A D+V NP NA    +  + +++ V + Y+EREEI
Sbjct: 68  VKEILSSMGCSSDFIESAAPDISSFALDMVTNPCNASSSEVLTMVLAIHVTTPYDEREEI 127

Query: 142 GRVLRES-SEQAFKASPACASAIEGLKNLEIDVHGELLIGECRICLDELMNGMEVTQLPC 201
            R L ES  ++A +  PA  S I+GLK + ++  G   + EC +CL+E + G EV  LPC
Sbjct: 128 DRALSESLMQEASRFKPASKSCIDGLKRMSLE--GSCSMKECMVCLEEFLMGSEVVCLPC 187

Query: 202 AHFYHRECIVKWLETSHLCPLCRYAMP 225
            H +H +CIV+WLETSHLCPLCR+AMP
Sbjct: 188 GHIFHGDCIVRWLETSHLCPLCRFAMP 212

[Close]
BLAST of CmaCh15G006740 vs. TrEMBL
Match: B9RJ35_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1030640 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-33
Identity = 82/226 (36.28%), Postives = 130/226 (57.52%), Query Frame = 1 

Query: 3   MDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNSSL 62
           M + YEY +WQ      D N   SN   + CD F   + F HVL+ ++ +     + ++ 
Sbjct: 1   MASTYEYYMWQ------DFNNKDSNDIDVDCDIFDIQIHFHHVLEIHYPESNQIPVTTTH 60

Query: 63  SSSLIPCDVFLASG----SSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRR 122
            S  IP ++  +S     SSI+ A+ S T  ++DF+D  +P+V S A ++  +P N   +
Sbjct: 61  RSFPIPRNLIFSSDDQSRSSIMDAILSTTAASRDFIDLILPEVSSFALEMATHPSNKNVK 120

Query: 123 IFPLAVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGE 182
           +  + + + VV+ Y+EREEI R L E+ ++  +  PA  S IEGLK + ID   + + GE
Sbjct: 121 VLTMGLLICVVTPYDEREEIDRALGETIQEKARFKPASKSCIEGLKRVRIDKDDDKISGE 180

Query: 183 -CRICLDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAM 224
            C +CL++   G  V +L C H +H +CIVKWL T+HLCPLCR+++
Sbjct: 181 TCMVCLEKESVGEVVIRLACGHVFHEDCIVKWLHTNHLCPLCRFSI 220

[Close]
BLAST of CmaCh15G006740 vs. TrEMBL
Match: A0A0D2U3Q8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G153700 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.4e-24
Identity = 83/222 (37.39%), Postives = 116/222 (52.25%), Query Frame = 1 

Query: 28  SHLLPCDCFLFH------LRFRHVLQSNHSQEFHTLLNSSLSSSLIPCDVFLA--SGSSI 87
           +HL P D  + H      + FR++  S+H  +    L +   S L   D+F +  +G +I
Sbjct: 15  NHLEPLDFEISHHFFHINVEFRYI--SSHDPQI--TLETRNRSILCRRDLFFSEQNGRNI 74

Query: 88  LIAVFSGTGVAQDFLDAA-VPDVLSVAADIVCNPLNAGRRIFPLAVSVLVVSLYNEREEI 147
           LIA+ +  G +Q F+D   VPDV+S A D    P+N GR++  L V +++    N+  E 
Sbjct: 75  LIAMVADFGASQHFIDTVLVPDVMSFAWDTHSMPMNLGRQVIKLRVELVIEVRPNDEIE- 134

Query: 148 GRVLRESSEQAFKASPACASAIEGLKNL-----EID----------VHGELLIGECRICL 207
                ES   +    PA  S+IE LK +     E+D            G     EC +CL
Sbjct: 135 -----ESLTSSVNFKPASKSSIEALKRVIWDDDELDHIPLKKRRKLAKGLSSRKECVVCL 194

Query: 208 DELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMPL 226
           +E ++G EV  LPC H YH  CIVKWLETSHLCPLCRY MP+
Sbjct: 195 EEFLDGEEVASLPCGHVYHYGCIVKWLETSHLCPLCRYHMPI 226

[Close]
BLAST of CmaCh15G006740 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-13
Identity = 30/92 (32.61%), Postives = 57/92 (61.96%), Query Frame = 1 

Query: 136 EEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELL---IGECRICLDELMNGMEV 195
           E++ + L E+    +   PA  SAI+ L  +++    ++L   + +C +C+DE  +G +V
Sbjct: 172 EQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTK--DMLKSEMNQCAVCMDEFEDGSDV 231

Query: 196 TQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
            Q+PC H +H++C++ WLE  + CP+CR+ +P
Sbjct: 232 KQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 261

[Close]
BLAST of CmaCh15G006740 vs. TAIR10
Match: AT3G02340.1 (AT3G02340.1 RING/U-box superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-12
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1 

Query: 154 PACASAIEGLKNLEIDVHGELLIGE--CRICLDELMNGMEVTQLPCAHFYHRECIVKWLE 213
           PA  S I+ L  +E+ V  EL  G   C +C DE++   +V +LPC+HFYH ECI+ WL 
Sbjct: 309 PAAKSVIQDLPVVELAVE-ELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLG 368

Query: 214 TSHLCPLCRYAMP 225
             + CP+CRY +P
Sbjct: 369 IRNTCPVCRYELP 380

[Close]
BLAST of CmaCh15G006740 vs. TAIR10
Match: AT5G64920.1 (AT5G64920.1 COP1-interacting protein 8)

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-12
Identity = 29/72 (40.28%), Postives = 42/72 (58.33%), Query Frame = 1 

Query: 152 ASPACASAIEGLKNLEIDVHGELLIGECRICLDELMNGMEVTQLPCAHFYHRECIVKWLE 211
           A PA  SAIE L+  E+      ++  C +C D ++ G    +LPC H YH +CIV WL 
Sbjct: 230 APPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLG 289

Query: 212 TSHLCPLCRYAM 224
           T + CP+CR+ +
Sbjct: 290 TRNSCPVCRFQL 301

[Close]
BLAST of CmaCh15G006740 vs. TAIR10
Match: AT3G13430.1 (AT3G13430.1 RING/U-box superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-12
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 1 

Query: 140 RVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECRICLDELMNGMEVTQLPCAH 199
           R+        +   PA   A+E L  ++I+    LL  +C +CLD+   GME  ++PC H
Sbjct: 190 RLAENDLNNRYGTPPATKEAVEALAMVKIE--DSLL--QCSVCLDDFEIGMEAKEMPCKH 249

Query: 200 FYHRECIVKWLETSHLCPLCRYAMP 225
            +H +C++ WLE    CP+CRY +P
Sbjct: 250 KFHSDCLLPWLELHSSCPVCRYLLP 270

[Close]
BLAST of CmaCh15G006740 vs. TAIR10
Match: AT5G15820.1 (AT5G15820.1 RING/U-box superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-12
Identity = 28/72 (38.89%), Postives = 45/72 (62.50%), Query Frame = 1 

Query: 154 PACASAIEGLKNLEIDVHGELLIG-ECRICLDELMNGMEVTQLPCAHFYHRECIVKWLET 213
           PA  S ++GL ++E+ +     +   C IC DE++   +V +LPC H+YH ECI+ WL  
Sbjct: 265 PASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGI 324

Query: 214 SHLCPLCRYAMP 225
            + CP+CR+ +P
Sbjct: 325 RNTCPVCRHELP 336

[Close]
BLAST of CmaCh15G006740 vs. NCBI nr
Match: gi|449465461|ref|XP_004150446.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-107
Identity = 194/226 (85.84%), Postives = 204/226 (90.27%), Query Frame = 1 

Query: 1   MAMDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNS 60
           MAMDTLY+Y IWQPEEGEDD+N  ISNSHLLPC+CFLFHL FRH+LQSNHSQ+FH LLNS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQFHYLLNS 60

Query: 61  SLSSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRRIF 120
           SLSS LIPCDVF A+ SSILIAVFSGTGVAQDFLD AVPDVLSVAADI CNPLNAGR I 
Sbjct: 61  SLSSFLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECR 180
           PLAVSVLVVS YNER+EIGRVLRESS QAFK  PA   AIEGLK +EIDV GELLIGECR
Sbjct: 121 PLAVSVLVVSPYNERQEIGRVLRESSPQAFKTLPASEMAIEGLKKVEIDVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMPLS 227
           ICLDELMNGMEVT+LPCAH YHR+CIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELMNGMEVTRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]
BLAST of CmaCh15G006740 vs. NCBI nr
Match: gi|659133409|ref|XP_008466716.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 4.7e-104
Identity = 188/226 (83.19%), Postives = 201/226 (88.94%), Query Frame = 1 

Query: 1   MAMDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNS 60
           MAMDTLY+Y IWQPEEGEDD+N  ISNSHLLPC+CFLFHL FRH+LQSNHSQ+ H LLNS
Sbjct: 1   MAMDTLYDYHIWQPEEGEDDLNVTISNSHLLPCNCFLFHLHFRHILQSNHSQQSHYLLNS 60

Query: 61  SLSSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRRIF 120
           SLSS LIPCDVF A+ SSILIAVFSGTGVAQDFLD AVPDVLSVAADI CNPLNAGR I 
Sbjct: 61  SLSSYLIPCDVFFATASSILIAVFSGTGVAQDFLDTAVPDVLSVAADIACNPLNAGRTIL 120

Query: 121 PLAVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECR 180
           PL VSVLVVS YNER+EIG+VLRESS QAFK  PA   AIE LKN+EI V GELLIGECR
Sbjct: 121 PLTVSVLVVSPYNERQEIGQVLRESSPQAFKTLPASEMAIEDLKNVEIGVGGELLIGECR 180

Query: 181 ICLDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMPLS 227
           ICLDEL+NGME+T+LPCAH YHR+CIVKWLETSHLCPLCRYAMPLS
Sbjct: 181 ICLDELVNGMEITRLPCAHLYHRDCIVKWLETSHLCPLCRYAMPLS 226

[Close]
BLAST of CmaCh15G006740 vs. NCBI nr
Match: gi|645225559|ref|XP_008219633.1| (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Prunus mume])

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-44
Identity = 95/222 (42.79%), Postives = 137/222 (61.71%), Query Frame = 1 

Query: 3   MDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNSSL 62
           M+T+Y+Y I Q E      N  +  +HLL CDCF+FHL F H L+    Q+ +  LNS  
Sbjct: 1   METIYQYSISQVERQ----NQVLPTTHLLACDCFIFHLDFTHQLKLCFPQDLNIPLNSIQ 60

Query: 63  SSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRRIFPL 122
            S  +P DVF +     +  V SG+GV+ DF+   +P+V S A D+   P NAG R+ PL
Sbjct: 61  ESFFVPFDVFFSHTQETIQTVLSGSGVSMDFVHVLLPEVHSFAMDVAQEPANAGPRVVPL 120

Query: 123 AVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECRIC 182
            ++VL V+ +++R++I R + ES  Q F   PA  S+I GLK ++ID     +  EC IC
Sbjct: 121 VLAVLAVTPFDDRDQIERAIMESG-QVFNPVPAAKSSIAGLKKVKID--NLSVTKECSIC 180

Query: 183 LDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
           L+E   G+EV  +PC+H YH++CIV+WL+ SHLCP CR+ +P
Sbjct: 181 LEEFSAGLEVVLMPCSHLYHKDCIVEWLKRSHLCPYCRFKLP 215

[Close]
BLAST of CmaCh15G006740 vs. NCBI nr
Match: gi|596235776|ref|XP_007224385.1| (hypothetical protein PRUPE_ppa021670mg [Prunus persica])

HSP 1 Score: 185.7 bits (470), Expect = 9.2e-44
Identity = 95/222 (42.79%), Postives = 137/222 (61.71%), Query Frame = 1 

Query: 3   MDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNSSL 62
           M+T+Y+Y I Q E+     N  +  +HLL CDCF+F L F H L+    Q+ +  LNS  
Sbjct: 1   METIYQYSISQVEQQ----NQVLPTTHLLACDCFIFRLDFTHQLKLCFPQDLNIPLNSIQ 60

Query: 63  SSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAGRRIFPL 122
            S  +P DVF +     +  V SG+GV+ DF+   +P+V S A D+   P NAG RI PL
Sbjct: 61  ESFFVPFDVFFSHTQETIQTVLSGSGVSMDFVHVLLPEVHSFAMDVAQEPANAGPRIVPL 120

Query: 123 AVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGECRIC 182
            ++VL V+ +++R++I R + ES  Q F   PA  S+I GLK ++ID     +  EC IC
Sbjct: 121 VLAVLAVTPFDDRDQIERAIMESG-QVFNPVPAAKSSIAGLKKVKID--NLSVTKECSIC 180

Query: 183 LDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
           L+E   G+EV  +PC+H YH++CIV+WL+ SHLCP CR+ +P
Sbjct: 181 LEEFSAGLEVVLMPCSHLYHKDCIVEWLKRSHLCPYCRFKLP 215

[Close]
BLAST of CmaCh15G006740 vs. NCBI nr
Match: gi|470112968|ref|XP_004292700.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 92/225 (40.89%), Postives = 135/225 (60.00%), Query Frame = 1 

Query: 3   MDTLYEYQIWQPEEGEDDINFAISNSHLLPCDCFLFHLRFRHVLQSNHSQEFHTLLNSSL 62
           M+TLY+Y I+Q E+     N A  N+ LL CDCF+F+L F H LQ  + Q     LNS  
Sbjct: 1   METLYQYSIYQEEQ-----NHAFPNTQLLSCDCFIFNLHFTHQLQLYYPQHVFIPLNSIQ 60

Query: 63  SSSLIPCDVFLASGSSILIAVFSGTGVAQDFLDAAVPDVLSVAADIVCNPLNAG---RRI 122
            S  +PC+VF       +  + SGTGV+ DF++A VP+V S A D+     N      ++
Sbjct: 61  ESFFVPCNVFFTHTHDTINTILSGTGVSLDFIEALVPEVYSFALDVATVFENGDPDEHKV 120

Query: 123 FPLAVSVLVVSLYNEREEIGRVLRESSEQAFKASPACASAIEGLKNLEIDVHGELLIGEC 182
            P  + V+ V+ Y++ ++I R + ES  Q F   PA  S+I  LK ++++     ++ EC
Sbjct: 121 VPFNLGVVAVTPYDDHDQIERAIWESG-QVFNPVPATRSSIAALKKVKVE--NLSVVNEC 180

Query: 183 RICLDELMNGMEVTQLPCAHFYHRECIVKWLETSHLCPLCRYAMP 225
            ICL+E   G+EV  +PC H YH++CIV+WL+ SHLCPLCR++MP
Sbjct: 181 SICLEEFSTGLEVIGMPCNHVYHKDCIVEWLKRSHLCPLCRFSMP 217

The following BLAST results are available for this feature:
BLAST of CmaCh15G006740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RING1_GOSHI1.4e-1234.78E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RNG1L_ARATH3.2e-1232.61E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
CIP8_ARATH1.0e-1040.28E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1[more]
RDUF2_ARATH3.3e-0934.45E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1[more]
R126B_XENLA6.2e-0835.71E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1[more]
BLAST of CmaCh15G006740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDU3_CUCSA1.4e-10785.84Uncharacterized protein OS=Cucumis sativus GN=Csa_6G385070 PE=4 SV=1[more]
M5XI10_PRUPE6.4e-4442.79Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021670mg PE=4 SV=1[more]
B9GU33_POPTR1.1e-3540.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08360g PE=4 SV=2[more]
B9RJ35_RICCO2.3e-3336.28Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1030640 PE=4 SV=1[more]
A0A0D2U3Q8_GOSRA7.4e-2437.39Uncharacterized protein OS=Gossypium raimondii GN=B456_008G153700 PE=4 SV=1[more]
BLAST of CmaCh15G006740 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.11.8e-1332.61 RING/U-box superfamily protein[more]
AT3G02340.12.0e-1245.21 RING/U-box superfamily protein[more]
AT5G64920.15.8e-1240.28 COP1-interacting protein 8[more]
AT3G13430.15.8e-1235.29 RING/U-box superfamily protein[more]
AT5G15820.15.8e-1238.89 RING/U-box superfamily protein[more]
BLAST of CmaCh15G006740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465461|ref|XP_004150446.1|2.0e-10785.84PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|659133409|ref|XP_008466716.1|4.7e-10483.19PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|645225559|ref|XP_008219633.1|2.4e-4442.79PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Prunus mume][more]
gi|596235776|ref|XP_007224385.1|9.2e-4442.79hypothetical protein PRUPE_ppa021670mg [Prunus persica][more]
gi|470112968|ref|XP_004292700.1|1.1e-4140.89PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G006740.1CmaCh15G006740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 178..220
score: 5.7
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 179..219
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 179..220
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 178..220
score: 9.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 178..222
score: 1.6
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 127..224
score: 3.8
NoneNo IPR availablePANTHERPTHR22763:SF46PROTEIN SAN1coord: 127..224
score: 3.8
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 167..224
score: 1.48

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh15G006740Cucsa.188140Cucumber (Gy14) v1cgycmaB0546
CmaCh15G006740Cla013937Watermelon (97103) v1cmawmB260
CmaCh15G006740Csa6G385070Cucumber (Chinese Long) v2cmacuB310
CmaCh15G006740MELO3C010617Melon (DHL92) v3.5.1cmameB268
CmaCh15G006740ClCG08G005710Watermelon (Charleston Gray)cmawcgB273
CmaCh15G006740CSPI06G20370Wild cucumber (PI 183967)cmacpiB316
CmaCh15G006740CmoCh04G024750Cucurbita moschata (Rifu)cmacmoB309
CmaCh15G006740CmoCh15G006860Cucurbita moschata (Rifu)cmacmoB287
CmaCh15G006740Lsi08G004370Bottle gourd (USVL1VR-Ls)cmalsiB294
CmaCh15G006740Cp4.1LG13g04620Cucurbita pepo (Zucchini)cmacpeB305
CmaCh15G006740MELO3C010617.2Melon (DHL92) v3.6.1cmamedB307
CmaCh15G006740CsaV3_6G034420Cucumber (Chinese Long) v3cmacucB0364
CmaCh15G006740Cla97C08G148490Watermelon (97103) v2cmawmbB319
CmaCh15G006740Bhi04G001515Wax gourdcmawgoB0391
CmaCh15G006740CsGy6G019820Cucumber (Gy14) v2cgybcmaB742
CmaCh15G006740Carg01534Silver-seed gourdcarcmaB1148
CmaCh15G006740Carg24436Silver-seed gourdcarcmaB0620
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh15G006740CmaCh04G023640Cucurbita maxima (Rimu)cmacmaB325
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh15G006740Silver-seed gourdcarcmaB0941
CmaCh15G006740Cucumber (Chinese Long) v3cmacucB0338
CmaCh15G006740Watermelon (97103) v2cmawmbB298
CmaCh15G006740Wax gourdcmawgoB0409
CmaCh15G006740Cucurbita maxima (Rimu)cmacmaB039
CmaCh15G006740Cucurbita maxima (Rimu)cmacmaB307
CmaCh15G006740Cucurbita moschata (Rifu)cmacmoB294
CmaCh15G006740Cucurbita moschata (Rifu)cmacmoB282
CmaCh15G006740Wild cucumber (PI 183967)cmacpiB294
CmaCh15G006740Cucumber (Chinese Long) v2cmacuB289
CmaCh15G006740Melon (DHL92) v3.5.1cmameB282
CmaCh15G006740Watermelon (Charleston Gray)cmawcgB254
CmaCh15G006740Watermelon (97103) v1cmawmB288
CmaCh15G006740Cucurbita pepo (Zucchini)cmacpeB318
CmaCh15G006740Cucurbita pepo (Zucchini)cmacpeB325
CmaCh15G006740Cucurbita pepo (Zucchini)cmacpeB334
CmaCh15G006740Bottle gourd (USVL1VR-Ls)cmalsiB282
CmaCh15G006740Cucumber (Gy14) v2cgybcmaB489
CmaCh15G006740Melon (DHL92) v3.6.1cmamedB322