CmaCh14G012340 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCCAAAGAACACAAGCTGGGTATGGACAGATTGAAGCTTCACGACAAGTCTCTAACTTGGAAAAAGAATTTGCATTTGGAATTCCCCAAAGAACAAGACAGGGCTTGTTTAGGTTCGTTTGTTTGGATGTCCAGAATTGCATTGTTGTGTCGTTGTCATCTCAAACGTGGCTTGGCGACAAGTTGCAGAGCCTGAAGGTGAGCTTCCACCATGTTTTGAGTATTGAAATGGCGAGAGAGAGAATGAGATGCTAACGGAATAAGATAAAGGGAAATGGGAAATTAAAAATGGAAGAGAAAGAAGGAGAAGACATTGGAGCTGATATCATTTGCGAGAGAAACAGAGTGATGTGTATGAAAAACAGGGGTTTTGTGTTCACAAGGAGAGTGGTATGTGTAACTGCTGAAAAGGAGCAAGGTTGAGTAGGGAAAAGGGTTGTGACGTTATTCAAGTGATATTAAGAAAAATGGAGTCTGTGTTGAATTAGAGAAGGAAACAGAACATTATTCATAAGGGTGTGAAAATCTTTTCCTAATAAACGCATTTTAAAATTGTGAAGTTGATGACGATACGTAACGGGACAAAATGGACAATATCTATTAGTAATGGGTTTGGGTTGTTACAAATAATATTAGAGCTAGATACTAGGCGGTGTGCCAGCGAGGACGCTAGCCCCCAAAGAAGTAGATTGTAAGATCTTATGTTGGTTGGAGATGAGAACAAATCATTTCTCGAAAGGGTGTGGAAACCTTTTACTAGCAGACGCATTTAAAAACTGTGGAGCTAAGCGATGCGTAACGGGTCAAAACGAACAACATCTGGGCCTCCAAGTGGGCCTCCAACCACATTAGTTTGAGAGAGAAACGAAATATTTCTGATAATGGTGAGGTTTCGGTCCCCAAGTGGACCCCCAACTACATTGGTTTGAGAGAGAAACGAAACATTTCTTATAAGAGTGTTGAAACCTCTCCCTACCAGATAAGTTTTAAAATTGTGAGGCTAACGACAATACATTACGGACAAAAACAGACAAAATATATTAGCGATGACCTTGAATTGTTATAGTATAGTTACTTATAGTTGTTACCATACAAATTCTAGTCATGAAATTTAAAGTTATAATTTTTTTTTACATACGTCTAAAAGTGATGTATACTATTATATTGGCAATGAAAAGATACCTTACTTCCAGACCGAGACAACACTTTTCCCCTGCCCATATATATACTTTTGCAATCTTTTTTACAATTGTAGTTCGTTCACTTTTTCACTTTTAAGACAGCCATGCTCGTCTGATAAGAGCCTTTCCACATAGATTCCTTAACCCATGCCACCATTTTCCTCCATATAAATCTCTTGTTTCCCATCTGGCTTTTGCTCAACAAGCAACTCTTCTTCATAAAACTCAAAACCATGGATAGTAACCATGGCGCTTACACGAACCAGATCCGTCTCAGATACCACTGGCCATCGTCTTGGCTCTTGCTTCTGCTGTGGTGCTTTCACCATTAAGACCTTATGAATCCAGATGGAGCTCTGGATTTGTTCTTCGACTGGTTCTTTTGGTGCTTATAATTGCCATTAAGACATCTTCGTCTTGCTCATCCATGTCCACGGACGGAAGGGAGAGAGATTCTGCAATTCTCTCGTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCCTGGGGACTTGCAGGGCTTTTAATGATGTTGATTTTCGGGCTTTCTTGGCAGAGTTATGTTAAAGAATTCCTCTGGAGATAG ATGCCCCAAAGAACACAAGCTGGGTATGGACAGATTGAAGCTTCACGACAAGTCTCTAACTTGGAAAAAGAATTTGCATTTGGAATTCCCCAAAGAACAAGACAGGGCTTGTTTAGGTTCGTTTGTTTGGATGTCCAGAATTGCATTGTTGTGTCGTTGTCATCTCAAACGTGGCTTGGCGACAAGTTGCAGAGCCTGAAGATACCACTGGCCATCGTCTTGGCTCTTGCTTCTGCTGTGGTGCTTTCACCATTAAGACCTTATGAATCCAGATGGAGCTCTGGATTTGTTCTTCGACTGGTTCTTTTGGTGCTTATAATTGCCATTAAGACATCTTCGTCTTGCTCATCCATGTCCACGGACGGAAGGGAGAGAGATTCTGCAATTCTCTCGTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCCTGGGGACTTGCAGGGCTTTTAATGATGTTGATTTTCGGGCTTTCTTGGCAGAGTTATGTTAAAGAATTCCTCTGGAGATAG ATGCCCCAAAGAACACAAGCTGGGTATGGACAGATTGAAGCTTCACGACAAGTCTCTAACTTGGAAAAAGAATTTGCATTTGGAATTCCCCAAAGAACAAGACAGGGCTTGTTTAGGTTCGTTTGTTTGGATGTCCAGAATTGCATTGTTGTGTCGTTGTCATCTCAAACGTGGCTTGGCGACAAGTTGCAGAGCCTGAAGATACCACTGGCCATCGTCTTGGCTCTTGCTTCTGCTGTGGTGCTTTCACCATTAAGACCTTATGAATCCAGATGGAGCTCTGGATTTGTTCTTCGACTGGTTCTTTTGGTGCTTATAATTGCCATTAAGACATCTTCGTCTTGCTCATCCATGTCCACGGACGGAAGGGAGAGAGATTCTGCAATTCTCTCGTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCCTGGGGACTTGCAGGGCTTTTAATGATGTTGATTTTCGGGCTTTCTTGGCAGAGTTATGTTAAAGAATTCCTCTGGAGATAG MPQRTQAGYGQIEASRQVSNLEKEFAFGIPQRTRQGLFRFVCLDVQNCIVVSLSSQTWLGDKLQSLKIPLAIVLALASAVVLSPLRPYESRWSSGFVLRLVLLVLIIAIKTSSSCSSMSTDGRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSYVKEFLWR
BLAST of CmaCh14G012340 vs. TrEMBL
Match: A0A0A0LEN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G651850 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 5.6e-32 Identity = 83/103 (80.58%), Postives = 88/103 (85.44%), Query Frame = 1
BLAST of CmaCh14G012340 vs. TrEMBL
Match: M5WZ95_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016854mg PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 66/109 (60.55%), Postives = 81/109 (74.31%), Query Frame = 1
BLAST of CmaCh14G012340 vs. TrEMBL
Match: U5GPU7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s06410g PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.5e-21 Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of CmaCh14G012340 vs. TrEMBL
Match: B9GKT9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s16850g PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.5e-21 Identity = 67/112 (59.82%), Postives = 79/112 (70.54%), Query Frame = 1
BLAST of CmaCh14G012340 vs. TrEMBL
Match: A0A067KX22_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24696 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.5e-21 Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 1
BLAST of CmaCh14G012340 vs. NCBI nr
Match: gi|700203368|gb|KGN58501.1| (hypothetical protein Csa_3G651850 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 8.0e-32 Identity = 83/103 (80.58%), Postives = 88/103 (85.44%), Query Frame = 1
BLAST of CmaCh14G012340 vs. NCBI nr
Match: gi|595974543|ref|XP_007217775.1| (hypothetical protein PRUPE_ppa016854mg [Prunus persica]) HSP 1 Score: 117.9 bits (294), Expect = 1.8e-23 Identity = 66/109 (60.55%), Postives = 81/109 (74.31%), Query Frame = 1
BLAST of CmaCh14G012340 vs. NCBI nr
Match: gi|645244285|ref|XP_008228360.1| (PREDICTED: uncharacterized protein LOC103327771 [Prunus mume]) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22 Identity = 66/109 (60.55%), Postives = 81/109 (74.31%), Query Frame = 1
BLAST of CmaCh14G012340 vs. NCBI nr
Match: gi|645243894|ref|XP_008228186.1| (PREDICTED: uncharacterized protein LOC103327624 [Prunus mume]) HSP 1 Score: 113.2 bits (282), Expect = 4.4e-22 Identity = 66/109 (60.55%), Postives = 81/109 (74.31%), Query Frame = 1
BLAST of CmaCh14G012340 vs. NCBI nr
Match: gi|694400831|ref|XP_009375493.1| (PREDICTED: uncharacterized protein LOC103964298 [Pyrus x bretschneideri]) HSP 1 Score: 112.8 bits (281), Expect = 5.7e-22 Identity = 67/115 (58.26%), Postives = 83/115 (72.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |