CmaCh13G003060 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G003060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ribosomal protein
Location	Cma_Chr13 : 3271085 .. 3273213 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTCTCCTCCGCTTCATCTTCTTAATCTCTATAGCATTGCGAAAATCCAACTTCTTGCGTTTTTGAATTTTGTGAATTTATTTTTCCGTTGTTTTTGTTTTTGGGGTCTGATTTGCAGTTTACCTTGGTTACTGGTCATGTTTATGTCAGTTGCTCCATTGTTATTTGCTTTCTTTGAAGAGTCTTATCTTTTCTCAACTATGCTTGTGCACAGGACTAAGTGTATAGTGTCCTTGAGACGGCGAAGATTCGAAAATGAGGTATTTTTTACGGCATTCTCTTTGTTTTGGATAATTGTTATGGATTCAGATTCATGTTCACATTTGGGTCATGCTATTCCCTTGATATATTTTTTTTTCGATACTACTGTTTTAAGTTTAATGGTTGCTACTGTCTGGAGTAATGGGTTCTGAATGATTTAATCAGCTGTTTGAGTAATCTGAACAGTTTGAGAATGTTAGGTTAGTTATCTTCAGGAAGTAGGCTTGCATTTCCATGCTTCTTCAATTTGTTTCAGTGTGTGATCGTATTAGTTATACCTTGTGTGCGTGGTCTTATTTATCTTCTCATTTTTCTACAGTAAGCTTCAGAGTGAAGCTTTGAGAGAAGCCATCTCATCTATCTTCACCGATAGCAATGAGAAAAAGAGGAAGTTTACCGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCCCACATTCCCCGCCCCAAGATGAAGATTTGCATGCTTGGTGATGCCTTGCACGTTGAAGAGGTAATTTTACTAGCTCTATGTGCATGATTCTGTTACTGGTTACCCTGTGATATTTTTCTTGCTATATCTTCAACAATGCTTGTGTGGCTTTAGAAATTTATTTTATTATTCTTAACTTTTTTAACTTAGCATATTTGTTGCTATACAATCAAGTTTAAAGCTAGATTATGGCTATAACTCAGCATATTTATTTGTGGTGTGTATGAGCCAAACACTAGCGTTTCTGATGGTTGTTTTAGAGAGAGATAATTTGGTGTGAATCAATGCATTGTTTTTTCCTTATTTTTGGGCTTCCATAGATTCCTCTTCTTATGTGTCCTCTAGGGTATGTCTTAATGTTGTTTCATGGAAATCTATTTCAGGCTGAAAAGATTGGTCTAGATTATATGGACGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAAAAATACCACGCCTTTTTGGCATCTGAAGCTGTTATCAAGCAGATCCCTCGTCTTCTGGGCCCTGGTCTCAACAAAGCAGGTTGGAATATTTTATGGATATGTAATTCCACTGTTTCTCTTCACCAAATGTGATTAATTGGCAACTCCCTGAAATATGAATCCTTGTTATGTTTCCAAGAATAGAAGGTGGAAAGCTAGAATTTTTTTAGGTATGTTAATTTTATCTTAACCTTTGTCATTTCTCCAGGAAAATTCCCAACATTGGTGACGCACCAAGAATCACTTGAGTCCAAGGTTAATGAGACCAAGGCAATGGTTAAGTTTCAACTGAAGAAGGTTCTTTGCATGGGAGTGGCCGTGGGAAATGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTTCTGGTTTCTTTATTGAAAAAGAATTGGCAGAATGTAAGTTAAATCTCAGTGCAACTCAACCTGAAGATGTGTTTCATCATTTTCTCTCAAGGGAATGTAAATATTGTCGTTTCATGATTTTTGCAGGTTAGGTGCCTGTACCTGAAGAGCACGATGGGGAAGTCGTACCGGGTTTTCTAAGCTCTGTTAGCAATCTAGTCAGTTTTATGTTTGATCTTTTTTACTGTTGACGTTATTTTTTGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGATTGAATGATTCTTCAACAAAGAAACAGGGATGCTCTTTTCTCCTTTAAAACGACAATTGATAATGAAGTTTTTATTCCCATCAACCAAACTTATTCCCAACGTTCGTTTACATTACTATGTCTGGTTTTGTTGGGCTTGAATTGTTGGGTTTTTATTTTTTTGTGGGTTATTGACGTGCCAGCCC

mRNA sequence

CACTTCTCCTCCGCTTCATCTTCTTAATCTCTATAGCATTGCGAAAATCCAACTTCTTGCGTTTTTGAATTTTGTGAATTTATTTTTCCGTTGTTTTTGTTTTTGGGGTCTGATTTGCAGTTTACCTTGGTTACTGGTCATGTTTATGTCAGTTGCTCCATTGTTATTTGCTTTCTTTGAAGAGTCTTATCTTTTCTCAACTATGCTTGTGCACAGGACTAAGTGTATAGTGTCCTTGAGACGGCGAAGATTCGAAAATGAGTAAGCTTCAGAGTGAAGCTTTGAGAGAAGCCATCTCATCTATCTTCACCGATAGCAATGAGAAAAAGAGGAAGTTTACCGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCCCACATTCCCCGCCCCAAGATGAAGATTTGCATGCTTGGTGATGCCTTGCACGTTGAAGAGGCTGAAAAGATTGGTCTAGATTATATGGACGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAAAAATACCACGCCTTTTTGGCATCTGAAGCTGTTATCAAGCAGATCCCTCGTCTTCTGGGCCCTGGTCTCAACAAAGCAGGAAAATTCCCAACATTGGTGACGCACCAAGAATCACTTGAGTCCAAGGTTAATGAGACCAAGGCAATGGTTAAGTTTCAACTGAAGAAGGTTCTTTGCATGGGAGTGGCCGTGGGAAATGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTTCTGGTTTCTTTATTGAAAAAGAATTGGCAGAATGTTAGGTGCCTGTACCTGAAGAGCACGATGGGGAAGTCGTACCGGGTTTTCTAAGCTCTGTTAGCAATCTAGTCAGTTTTATGTTTGATCTTTTTTACTGTTGACGTTATTTTTTGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGATTGAATGATTCTTCAACAAAGAAACAGGGATGCTCTTTTCTCCTTTAAAACGACAATTGATAATGAAGTTTTTATTCCCATCAACCAAACTTATTCCCAACGTTCGTTTACATTACTATGTCTGGTTTTGTTGGGCTTGAATTGTTGGGTTTTTATTTTTTTGTGGGTTATTGACGTGCCAGCCC

Coding sequence (CDS)

ATGAGTAAGCTTCAGAGTGAAGCTTTGAGAGAAGCCATCTCATCTATCTTCACCGATAGCAATGAGAAAAAGAGGAAGTTTACCGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCCCACATTCCCCGCCCCAAGATGAAGATTTGCATGCTTGGTGATGCCTTGCACGTTGAAGAGGCTGAAAAGATTGGTCTAGATTATATGGACGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAAAAATACCACGCCTTTTTGGCATCTGAAGCTGTTATCAAGCAGATCCCTCGTCTTCTGGGCCCTGGTCTCAACAAAGCAGGAAAATTCCCAACATTGGTGACGCACCAAGAATCACTTGAGTCCAAGGTTAATGAGACCAAGGCAATGGTTAAGTTTCAACTGAAGAAGGTTCTTTGCATGGGAGTGGCCGTGGGAAATGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTTCTGGTTTCTTTATTGAAAAAGAATTGGCAGAATGTTAGGTGCCTGTACCTGAAGAGCACGATGGGGAAGTCGTACCGGGTTTTCTAA

Protein sequence

MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF

Homology

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BLAST of CmaCh13G003060 vs. Swiss-Prot
Match: R10A_ORYSJ (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 9.0e-105
Identity = 192/216 (88.89%), Postives = 204/216 (94.44%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of CmaCh13G003060 vs. Swiss-Prot
Match: R10A_ORYSI (60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 9.0e-105
Identity = 192/216 (88.89%), Postives = 204/216 (94.44%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSE L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           N+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 181 NIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of CmaCh13G003060 vs. Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.2e-102
Identity = 194/217 (89.40%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKK-RKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of CmaCh13G003060 vs. Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.2e-102
Identity = 191/216 (88.43%), Postives = 202/216 (93.52%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CmaCh13G003060 vs. Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.5e-101
Identity = 189/216 (87.50%), Postives = 201/216 (93.06%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

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BLAST of CmaCh13G003060 vs. TrEMBL
Match: A0A0A0KEW8_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.4e-111
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. TrEMBL
Match: A0A0A0LVE6_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 5.8e-111
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. TrEMBL
Match: A0A0B2R114_GLYSO (Ribosomal protein OS=Glycine soja GN=glysoja_026213 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.6e-108
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS I TDS EK RKF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. TrEMBL
Match: C6SVL1_SOYBN (Ribosomal protein OS=Glycine max GN=GLYMA_12G184900 PE=2 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.6e-108
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS I TDS EK RKF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. TrEMBL
Match: A0A0B2RKM0_GLYSO (Ribosomal protein OS=Glycine soja GN=glysoja_038803 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 6.0e-108
Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS I  DS EK RKF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. TAIR10
Match: AT5G22440.1 (AT5G22440.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 372.5 bits (955), Expect = 1.8e-103
Identity = 194/217 (89.40%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKK-RKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQSEA+REAISSI T   E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of CmaCh13G003060 vs. TAIR10
Match: AT1G08360.1 (AT1G08360.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 372.1 bits (954), Expect = 2.3e-103
Identity = 191/216 (88.43%), Postives = 202/216 (93.52%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CmaCh13G003060 vs. TAIR10
Match: AT2G27530.1 (AT2G27530.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 369.0 bits (946), Expect = 2.0e-102
Identity = 189/216 (87.50%), Postives = 201/216 (93.06%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSEA+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of CmaCh13G003060 vs. TAIR10
Match: AT2G42650.1 (AT2G42650.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 53/230 (23.04%), Postives = 110/230 (47.83%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKR-KFTETIE------LQIGLKNYDPQKDKRFSGSVK 60
           MS++  + + +A+ ++  + NEK R +  + +E      L + LK   PQ++   +  + 
Sbjct: 1   MSRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKI-PQRNFTNAYRIP 60

Query: 61  LPH----IPRPKMKICMLGD-----ALHVEEAEK-IGLDYMDVEGLKKLNKNK------K 120
           LPH          ++C++ D      L  E+A+K I  + + +  + KL+K K      +
Sbjct: 61  LPHPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFE 120

Query: 121 LVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQE-SLESKVNETKAMVKF 180
             +KL   Y  F +   VI  +P+L+G    ++ K P  +  +  + + ++ +      F
Sbjct: 121 SKRKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMF 180

Query: 181 QLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207
            ++   C  + V  ++ME   + +NV  ++N +V +L   W+ +R L+LK
Sbjct: 181 FMRTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLK 229

[Close]

BLAST of CmaCh13G003060 vs. TAIR10
Match: AT3G58660.1 (AT3G58660.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06
Identity = 54/229 (23.58%), Postives = 105/229 (45.85%), Query Frame = 1


Query: 2   SKLQSEALREAISSIFTDSNEKKR-------KFTETIELQIGLKNYDPQKDKRFSGSVKL 61
           S++  + +  A++ +    ++K +       +  E + L + LK   PQK +  +  + L
Sbjct: 22  SRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKI-PQKTRTNAYRIPL 81

Query: 62  PH-IPRPKM---KICMLGD-----ALHVEEA-EKIGLDYMDVEGLKKLNKNKKLVK---- 121
           PH +  P +   +IC++ D      L  ++A +KI  + + +  + KL+K K   K    
Sbjct: 82  PHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEA 141

Query: 122 --KLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPT-LVTHQESLESKVNETKAMVKFQ 181
             KL   Y  F     +I  +PR++G     + K P  L     + + ++ +      F 
Sbjct: 142 KRKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFF 201

Query: 182 LKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207
           ++   C  + VG ++M+  ++ +NV  ++N LV  L   W  VR L+LK
Sbjct: 202 IRTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLK 249

[Close]

BLAST of CmaCh13G003060 vs. NCBI nr
Match: gi|659117410|ref|XP_008458587.1| (PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo])

HSP 1 Score: 409.1 bits (1050), Expect = 4.9e-111
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. NCBI nr
Match: gi|449443440|ref|XP_004139485.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 8.4e-111
Identity = 207/216 (95.83%), Postives = 215/216 (99.54%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. NCBI nr
Match: gi|659071695|ref|XP_008461453.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 4.2e-110
Identity = 206/216 (95.37%), Postives = 214/216 (99.07%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGNV+M+EKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. NCBI nr
Match: gi|351721216|ref|NP_001236946.1| (uncharacterized protein LOC100305550 [Glycine max])

HSP 1 Score: 400.2 bits (1027), Expect = 2.3e-108
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS I TDS EK RKF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of CmaCh13G003060 vs. NCBI nr
Match: gi|356550103|ref|XP_003543429.1| (PREDICTED: 60S ribosomal protein L10a [Glycine max])

HSP 1 Score: 398.3 bits (1022), Expect = 8.7e-108
Identity = 204/216 (94.44%), Postives = 208/216 (96.30%), Query Frame = 1


Query: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAIS I  DS EK RKF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 217
           NVQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 181 NVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

The following BLAST results are available for this feature:

BLAST of CmaCh13G003060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
R10A_ORYSJ	9.0e-105	88.89	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1	[more]
R10A_ORYSI	9.0e-105	88.89	60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1	[more]
R10A3_ARATH	3.2e-102	89.40	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1	[more]
R10A1_ARATH	4.2e-102	88.43	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1	[more]
R10A2_ARATH	3.5e-101	87.50	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1	[more]

BLAST of CmaCh13G003060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEW8_CUCSA	3.4e-111	96.76	Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1	[more]
A0A0A0LVE6_CUCSA	5.8e-111	95.83	Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1	[more]
A0A0B2R114_GLYSO	1.6e-108	94.91	Ribosomal protein OS=Glycine soja GN=glysoja_026213 PE=3 SV=1	[more]
C6SVL1_SOYBN	1.6e-108	94.91	Ribosomal protein OS=Glycine max GN=GLYMA_12G184900 PE=2 SV=1	[more]
A0A0B2RKM0_GLYSO	6.0e-108	94.44	Ribosomal protein OS=Glycine soja GN=glysoja_038803 PE=3 SV=1	[more]

BLAST of CmaCh13G003060 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22440.1	1.8e-103	89.40	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	2.3e-103	88.43	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	2.0e-102	87.50	Ribosomal protein L1p/L10e family	[more]
AT2G42650.1	1.3e-08	23.04	Ribosomal protein L1p/L10e family	[more]
AT3G58660.1	1.6e-06	23.58	Ribosomal protein L1p/L10e family	[more]

BLAST of CmaCh13G003060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117410\|ref\|XP_008458587.1\|	4.9e-111	96.76	PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo]	[more]
gi\|449443440\|ref\|XP_004139485.1\|	8.4e-111	95.83	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus]	[more]
gi\|659071695\|ref\|XP_008461453.1\|	4.2e-110	95.37	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo]	[more]
gi\|351721216\|ref\|NP_001236946.1\|	2.3e-108	94.91	uncharacterized protein LOC100305550 [Glycine max]	[more]
gi\|356550103\|ref\|XP_003543429.1\|	8.7e-108	94.44	PREDICTED: 60S ribosomal protein L10a [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002143	Ribosomal_L1
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich
IPR016095	Ribosomal_L1_3-a/b-sand
IPR023673	Ribosomal_L1_CS
IPR023674	Ribosomal_L1-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G003060.1	CmaCh13G003060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002143	Ribosomal protein L1	PIR	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 1..216 score: 8.0
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich	GENE3D	G3DSA:3.30.190.20		coord: 6..60 score: 6.4E-49coord: 152..215 score: 6.4
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	G3DSA:3.40.50.790		coord: 62..151 score: 4.9
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 116..135 scor
IPR023674	Ribosomal protein L1-like	unknown	SSF56808	Ribosomal protein L1	coord: 21..216 score: 3.01
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 1..216 score: 1.2E
None	No IPR available	PANTHER	PTHR23105:SF55	SUBFAMILY NOT NAMED	coord: 1..216 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G003060	Cucsa.199730	Cucumber (Gy14) v1	cgycmaB0594
CmaCh13G003060	Cla008651	Watermelon (97103) v1	cmawmB210
CmaCh13G003060	MELO3C004713	Melon (DHL92) v3.5.1	cmameB204
CmaCh13G003060	ClCG01G012240	Watermelon (Charleston Gray)	cmawcgB183
CmaCh13G003060	ClCG02G022120	Watermelon (Charleston Gray)	cmawcgB191
CmaCh13G003060	CmoCh00G000300	Cucurbita moschata (Rifu)	cmacmoB206
CmaCh13G003060	CmoCh02G013700	Cucurbita moschata (Rifu)	cmacmoB234
CmaCh13G003060	Cla97C01G011580	Watermelon (97103) v2	cmawmbB215
CmaCh13G003060	Bhi08G000049	Wax gourd	cmawgoB0265

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh13G003060	CmaCh18G006570	Cucurbita maxima (Rimu)	cmacmaB214
CmaCh13G003060	CmaCh02G013300	Cucurbita maxima (Rimu)	cmacmaB230

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G003060	Cucurbita pepo (Zucchini)	cmacpeB236
CmaCh13G003060	Melon (DHL92) v3.6.1	cmamedB215
CmaCh13G003060	Watermelon (97103) v2	cmawmbB211
CmaCh13G003060	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G003060	Wild cucumber (PI 183967)	cmacpiB205
CmaCh13G003060	Wild cucumber (PI 183967)	cmacpiB222
CmaCh13G003060	Melon (DHL92) v3.5.1	cmameB196
CmaCh13G003060	Watermelon (Charleston Gray)	cmawcgB204