CmaCh12G010640 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTGTAGATCGTTAGATATCAACATCAAGAATGCCAAAGGCCTAAAGAATGTCAATCTCTTCTCAACGATGGATGTCTACGCCGTCGTTTCGATCTCTGGTGATCCGCGCGGGAAATTGAAGCAGAAGACTCCCGTGGCTAATGACGGAGGCTCGGATCCTCACTGGAATTTTGCTATGAAGTTCACAATCGATGAGGCTGCTGCACAGAGTAATCGGCTCAATTTGAAGATCAAACTCGTTTCCGAACGGAGTTTAGGTGATAAGAAGATCGGGAAGGTTATTGTTCCGATTAAGCAATTGCTCGATGAATGTGCCAAAGGAGATGAAGGAAACTCCGAGAGAACGGTCAGTTTTGGCGTCAGGACCGCGAGCGGAAAGGAAAAAGGTAACGTCGAATTTTCGTATAAATTTGGGGAAAAATACACTGTTCAGGCACCGCCGCCTCCGCCGGTGATGAAAACCGGCGAGGCAGTAGCGGCATATCCCCAAGGTTATGCTGCATCTAGTTCTGGATATCCGGCCGGAGGTGCTTATCCGCCTCCAGCAGGGACCGCTTATGCGTATCCGCCTCCACCGCAAGGGTACGGATATCCACCTCCTCCACCGCAAGGGTACGGATATCCACCAGCTCCACAGGCTGGATATGCGTACGGCGGTTACCCGCCGCAGTCAGGATACGGATATCCGCCGGTTCAACAACAACATAAGCCGCAGAAGAGCGGTATCGGCGGCATGGCTTTGGGAGCTGGAGCTGGTCTGGTTGGAGGTTTGTTGATCGGTGATATGATTTCAGATATAGGTGATTCGGCTGATGCTGGTTTTGGCGATGGCTTTGATTTCTAATACTCTGCTTCTTCTTCTCCTCTTCTCTTCATTTTCTTCAAGCTTATGATTAAGGAACCTATTATAATAAATTAGGAGTGTTTTTCTGTTAGAAATGATCATTAGTTGTTTAGATTCTCACTTTTTGTTTTGATGATAGCTTCCATTTCTAAGTCTCCTTCTCTTCTCCTCCTTCTAAATTTAGAAATGATCCTGCCTTTATGAGTAAAGAATACTCTCTCGTTAGTTAGTGTGAGGCGTTTTTGGGAAGTCCAAAGCAAAGTCACGAGAGTATATGCTTAAAGTGGACAATATCATACAATTGTGGAGAGTCATGTTCAAGTAACATGGTATCAGAGTCATGTCTTAAACTTAAACATGTCAATAAAATCCTCAAATGTTAAATAAAAGAAAAAAAAAAAAGAGTTGAGGTTCCTTGAATGCATAGTAAAAAATGACTAAAACTACAAAAGAAAAGGAGTCGCCTCAGTTAAGGGGAGCCGTACTTTGTTCGAGGGGAGGTGTTGGACTGGTGTTGGACGAAAGTTTCACATCGGCTAATTTAGGGAATAACCATCGTGTGAGGCGTTTTTTCTAACAATATCATATGATTGTAGAAAATGAGTCAAGACTGAATTAAGGGAAGTCGCACTTTGTTCGAGAGGAGGTGTTCGGATGAAAGTCCCACATCTGCTAATTTAGAAAATAATCATGGTGTGAGGCGTTTTTTTTACTTACAATATCATACAACTGTGGAGAGTTTAAAGCAAAGTCATGAGAATTTATGTTCACAGTGACAATATTATATATTAATATTGGTGGATAAAGTTAACTCGATTTCTAAATTCAGTTAGTTTTTTTAATTAATAAATTAATAATTATCGAAAATAATAGCTATCTATACAAAAATAAAACAAATTTTAAAAAAAAATAGTTGAACTTTTTATATGCAATATTTATTAATTTTCAATTGGCTACTAAAAAATATTTATTTAAATAGTTAATTTCCTACCAAAAAAATATGTTTAAAAATAAAATTCTAAATCTTTAACAGAATCAAATTATCTAAATTTTTAACAATAAAACTTTATATATATAATTTATATCAAAAAATAAATATTTTTATAATTTTAATAATTAAACATAGCCTAAATTAGATTTAATGAGTTAATGAGTTACCTACCTTAAATTATATAATAAAAAGTTTAAAGATAAAATATAAAATATAAAATATAATGATAAATTAAAAGATACCAACACAATTTCAAAACAACCTAAATTTAAAAATTAAAATCTTCAAAATTCACTTTTCTCAATTTCTCTCTAATTATAAAAAAAAAATCACGATTACAGAGCATTCAAGGTAAACGTCACCTGTGTCGAATGAATCGAAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCAGAGCCTCTCTGGCCAACCAAGAAACGCCACTTGCGAAGTACTTCGGTGAAAATCTAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTGCAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAACACATTGCGGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTAA ATGGAGTGTAGATCGTTAGATATCAACATCAAGAATGCCAAAGGCCTAAAGAATGTCAATCTCTTCTCAACGATGGATGTCTACGCCGTCGTTTCGATCTCTGGTGATCCGCGCGGGAAATTGAAGCAGAAGACTCCCGTGGCTAATGACGGAGGCTCGGATCCTCACTGGAATTTTGCTATGAAGTTCACAATCGATGAGGCTGCTGCACAGAGTAATCGGCTCAATTTGAAGATCAAACTCGTTTCCGAACGGAGTTTAGGTGATAAGAAGATCGGGAAGGTTATTGTTCCGATTAAGCAATTGCTCGATGAATGTGCCAAAGGAGATGAAGGAAACTCCGAGAGAACGGTCAGTTTTGGCGTCAGGACCGCGAGCGGAAAGGAAAAAGGTAACGTCGAATTTTCGTATAAATTTGGGGAAAAATACACTGTTCAGGCACCGCCGCCTCCGCCGGTGATGAAAACCGGCGAGGCAGTAGCGGCATATCCCCAAGGTTATGCTGCATCTAGTTCTGGATATCCGGCCGGAGGTGCTTATCCGCCTCCAGCAGGGACCGCTTATGCGTATCCGCCTCCACCGCAAGGGTACGGATATCCACCTCCTCCACCGCAAGGGTACGGATATCCACCAGCTCCACAGGCTGGATATGCGTACGGCGGTTACCCGCCGCAGTCAGGATACGGATATCCGCCGGTTCAACAACAACATAAGCCGCAGAAGAGCGGTATCGGCGGCATGGCTTTGGGAGCTGGAGCTGGTCTGGTTGGAGGTTTGTTGATCGGTGATATGATTTCAGATATAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCAGAGCCTCTCTGGCCAACCAAGAAACGCCACTTGCGAAGTACTTCGGTGAAAATCTAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTGCAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAACACATTGCGGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTAA ATGGAGTGTAGATCGTTAGATATCAACATCAAGAATGCCAAAGGCCTAAAGAATGTCAATCTCTTCTCAACGATGGATGTCTACGCCGTCGTTTCGATCTCTGGTGATCCGCGCGGGAAATTGAAGCAGAAGACTCCCGTGGCTAATGACGGAGGCTCGGATCCTCACTGGAATTTTGCTATGAAGTTCACAATCGATGAGGCTGCTGCACAGAGTAATCGGCTCAATTTGAAGATCAAACTCGTTTCCGAACGGAGTTTAGGTGATAAGAAGATCGGGAAGGTTATTGTTCCGATTAAGCAATTGCTCGATGAATGTGCCAAAGGAGATGAAGGAAACTCCGAGAGAACGGTCAGTTTTGGCGTCAGGACCGCGAGCGGAAAGGAAAAAGGTAACGTCGAATTTTCGTATAAATTTGGGGAAAAATACACTGTTCAGGCACCGCCGCCTCCGCCGGTGATGAAAACCGGCGAGGCAGTAGCGGCATATCCCCAAGGTTATGCTGCATCTAGTTCTGGATATCCGGCCGGAGGTGCTTATCCGCCTCCAGCAGGGACCGCTTATGCGTATCCGCCTCCACCGCAAGGGTACGGATATCCACCTCCTCCACCGCAAGGGTACGGATATCCACCAGCTCCACAGGCTGGATATGCGTACGGCGGTTACCCGCCGCAGTCAGGATACGGATATCCGCCGGTTCAACAACAACATAAGCCGCAGAAGAGCGGTATCGGCGGCATGGCTTTGGGAGCTGGAGCTGGTCTGGTTGGAGGTTTGTTGATCGGTGATATGATTTCAGATATAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCAGAGCCTCTCTGGCCAACCAAGAAACGCCACTTGCGAAGTACTTCGGTGAAAATCTAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTGCAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAACACATTGCGGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTAA MECRSLDINIKNAKGLKNVNLFSTMDVYAVVSISGDPRGKLKQKTPVANDGGSDPHWNFAMKFTIDEAAAQSNRLNLKIKLVSERSLGDKKIGKVIVPIKQLLDECAKGDEGNSERTVSFGVRTASGKEKGNVEFSYKFGEKYTVQAPPPPPVMKTGEAVAAYPQGYAASSSGYPAGGAYPPPAGTAYAYPPPPQGYGYPPPPPQGYGYPPAPQAGYAYGGYPPQSGYGYPPVQQQHKPQKSGIGGMALGAGAGLVGGLLIGDMISDIGVLSFVNFFHKSKVYAAVSITRASLANQETPLAKYFGENLVWNWPMKFYLKESKLQENALTLRIQLRRKRIFGGDEHIAEALVPLKNLFDGNKNVMDEN
BLAST of CmaCh12G010640 vs. Swiss-Prot
Match: SRC2_SOYBN (Protein SRC2 OS=Glycine max GN=SRC2 PE=2 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 3.2e-54 Identity = 145/280 (51.79%), Postives = 179/280 (63.93%), Query Frame = 1
BLAST of CmaCh12G010640 vs. Swiss-Prot
Match: SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.5e-51 Identity = 152/314 (48.41%), Postives = 189/314 (60.19%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TrEMBL
Match: A0A0A0LGE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G030090 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.7e-110 Identity = 218/275 (79.27%), Postives = 233/275 (84.73%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TrEMBL
Match: M5WC75_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009571mg PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 6.5e-70 Identity = 165/278 (59.35%), Postives = 197/278 (70.86%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TrEMBL
Match: F6HE67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01400 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.8e-64 Identity = 164/279 (58.78%), Postives = 186/279 (66.67%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TrEMBL
Match: A0A067JHR5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23324 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 2.6e-63 Identity = 159/281 (56.58%), Postives = 193/281 (68.68%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TrEMBL
Match: B9RF95_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1432940 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.5e-61 Identity = 157/282 (55.67%), Postives = 191/282 (67.73%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TAIR10
Match: AT1G09070.1 (AT1G09070.1 soybean gene regulated by cold-2) HSP 1 Score: 204.9 bits (520), Expect = 8.4e-53 Identity = 152/314 (48.41%), Postives = 189/314 (60.19%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TAIR10
Match: AT4G15755.1 (AT4G15755.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29 Identity = 105/294 (35.71%), Postives = 154/294 (52.38%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TAIR10
Match: AT3G16510.1 (AT3G16510.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 119.8 bits (299), Expect = 3.6e-27 Identity = 96/245 (39.18%), Postives = 129/245 (52.65%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TAIR10
Match: AT4G15740.1 (AT4G15740.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 82.8 bits (203), Expect = 4.8e-16 Identity = 78/216 (36.11%), Postives = 112/216 (51.85%), Query Frame = 1
BLAST of CmaCh12G010640 vs. TAIR10
Match: AT3G62780.1 (AT3G62780.1 Calcium-dependent lipid-binding (CaLB domain) family protein) HSP 1 Score: 76.3 bits (186), Expect = 4.5e-14 Identity = 89/273 (32.60%), Postives = 124/273 (45.42%), Query Frame = 1
BLAST of CmaCh12G010640 vs. NCBI nr
Match: gi|659070280|ref|XP_008454313.1| (PREDICTED: protein enabled homolog [Cucumis melo]) HSP 1 Score: 412.9 bits (1060), Expect = 5.8e-112 Identity = 217/273 (79.49%), Postives = 232/273 (84.98%), Query Frame = 1
BLAST of CmaCh12G010640 vs. NCBI nr
Match: gi|778666915|ref|XP_011648839.1| (PREDICTED: actin cytoskeleton-regulatory complex protein PAN1-like [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 2.4e-110 Identity = 218/275 (79.27%), Postives = 233/275 (84.73%), Query Frame = 1
BLAST of CmaCh12G010640 vs. NCBI nr
Match: gi|595827049|ref|XP_007205674.1| (hypothetical protein PRUPE_ppa009571mg [Prunus persica]) HSP 1 Score: 272.7 bits (696), Expect = 9.3e-70 Identity = 165/278 (59.35%), Postives = 197/278 (70.86%), Query Frame = 1
BLAST of CmaCh12G010640 vs. NCBI nr
Match: gi|645222044|ref|XP_008246407.1| (PREDICTED: neural Wiskott-Aldrich syndrome protein [Prunus mume]) HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69 Identity = 164/278 (58.99%), Postives = 198/278 (71.22%), Query Frame = 1
BLAST of CmaCh12G010640 vs. NCBI nr
Match: gi|657957900|ref|XP_008370454.1| (PREDICTED: uncharacterized protein LOC103433930 [Malus domestica]) HSP 1 Score: 266.9 bits (681), Expect = 5.1e-68 Identity = 156/276 (56.52%), Postives = 193/276 (69.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|