Cla019918 (gene) Watermelon (97103) v1

NameCla019918
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionSRC2 homolog (Fragment) (AHRD V1 ***- B3IYJ9_9SOLA); contains Interpro domain(s) IPR000008 C2 calcium-dependent membrane targeting
LocationChr2 : 25786958 .. 25787443 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTATCAATTACGGAGTATTCGATTTAAATATCACTTGCGCCGAAGGAATCAAAGGAGTTCTAAATTTCACCAATTTTTTCTTCAAATCAAAGGTCTATGCGGCGGTTTCCGTCGTCGGAATCTCTCCGGCCGCCCAAGAAACACCGCTAGCGAAATACTTCGGCGAAAATCCGGTGTGGAATTTTTGGATGAGGTTCTATTTAGAGGAATCGAAGCTACAAGAGAATACCCTAACTTTGAAGATTCAACTGAGGCGAAAGCGAACATTTGGAGGAGATGAAAACATTGCTGAAGCTTTGATTCCGTTGAGAAATCTTTTTAATGGCAATGAGAATGTAATGGATGAGAATTACAGTTACTCTTTTCTGTTCTCAAAGTCCGGCGGCCGCCGTGGTTTGGTGTACTTTTCGTATCGCTTCGGCCGGACTTACGGTGCATCCGCAGCAGGTGACGATGGAGGCGTGGTTGCTCCGTGTTTGTAG

mRNA sequence

ATGCCTATCAATTACGGAGTATTCGATTTAAATATCACTTGCGCCGAAGGAATCAAAGGAGTTCTAAATTTCACCAATTTTTTCTTCAAATCAAAGGTCTATGCGGCGGTTTCCGTCGTCGGAATCTCTCCGGCCGCCCAAGAAACACCGCTAGCGAAATACTTCGGCGAAAATCCGGTGTGGAATTTTTGGATGAGGTTCTATTTAGAGGAATCGAAGCTACAAGAGAATACCCTAACTTTGAAGATTCAACTGAGGCGAAAGCGAACATTTGGAGGAGATGAAAACATTGCTGAAGCTTTGATTCCGTTGAGAAATCTTTTTAATGGCAATGAGAATGTAATGGATGAGAATTACAGTTACTCTTTTCTGTTCTCAAAGTCCGGCGGCCGCCGTGGTTTGGTGTACTTTTCGTATCGCTTCGGCCGGACTTACGGTGCATCCGCAGCAGGTGACGATGGAGGCGTGGTTGCTCCGTGTTTGTAG

Coding sequence (CDS)

ATGCCTATCAATTACGGAGTATTCGATTTAAATATCACTTGCGCCGAAGGAATCAAAGGAGTTCTAAATTTCACCAATTTTTTCTTCAAATCAAAGGTCTATGCGGCGGTTTCCGTCGTCGGAATCTCTCCGGCCGCCCAAGAAACACCGCTAGCGAAATACTTCGGCGAAAATCCGGTGTGGAATTTTTGGATGAGGTTCTATTTAGAGGAATCGAAGCTACAAGAGAATACCCTAACTTTGAAGATTCAACTGAGGCGAAAGCGAACATTTGGAGGAGATGAAAACATTGCTGAAGCTTTGATTCCGTTGAGAAATCTTTTTAATGGCAATGAGAATGTAATGGATGAGAATTACAGTTACTCTTTTCTGTTCTCAAAGTCCGGCGGCCGCCGTGGTTTGGTGTACTTTTCGTATCGCTTCGGCCGGACTTACGGTGCATCCGCAGCAGGTGACGATGGAGGCGTGGTTGCTCCGTGTTTGTAG

Protein sequence

MPINYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAAQETPLAKYFGENPVWNFWMRFYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSYSFLFSKSGGRRGLVYFSYRFGRTYGASAAGDDGGVVAPCL
BLAST of Cla019918 vs. Swiss-Prot
Match: SRC2_SOYBN (Protein SRC2 OS=Glycine max GN=SRC2 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14
Identity = 58/153 (37.91%), Postives = 79/153 (51.63%), Query Frame = 1

Query: 1   MPINYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVG--ISPAAQETPLAKYFGEN 60
           M + Y   +LNI  A+ IK V    N F K  VYAAVS+ G  + P    T + K  G N
Sbjct: 1   MTMEYRTLELNIISAKDIKNV----NLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSN 60

Query: 61  PVWNFWMRFYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLF-NGNENVMDE 120
           P WN+ ++F + ES  +EN L+L+I+L   RT  GD  I    +PLR L  N  ++    
Sbjct: 61  PTWNYPVKFSVNESLAKENRLSLEIKLISDRTL-GDTVIGTVHVPLRELLDNPGDDSSFR 120

Query: 121 NYSYSFLFSKSGGRRGLVYFSYRFGRTYGASAA 151
             SY  +  +S   +G + FSY+FG    A AA
Sbjct: 121 QVSYQ-VMKQSRKSKGSLNFSYKFGEHVPAPAA 147

BLAST of Cla019918 vs. Swiss-Prot
Match: SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 42/143 (29.37%), Postives = 73/143 (51.05%), Query Frame = 1

Query: 9   DLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAAQETPLAKYFGENPVWNFWMRFY 68
           DL I  AE +K V        K  +YA VS+ G +   Q+T + K  G  P W   M+  
Sbjct: 7   DLTIISAEDLKDV----QLIGKQDLYAVVSINGDARTKQKTKVDKDCGTKPKWKHQMKLT 66

Query: 69  LEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSYSFLFSKS 128
           ++++  ++N LTL  ++   R   GD+ + E  +P++ L + N+   ++  +Y+     +
Sbjct: 67  VDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKGDEEKTVTYAVRL-PN 126

Query: 129 GGRRGLVYFSYRFGR--TYGASA 150
           G  +G + FS++FG   TYG+S+
Sbjct: 127 GKAKGSLKFSFKFGEKYTYGSSS 144

BLAST of Cla019918 vs. TrEMBL
Match: A0A0A0LIU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G030590 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-59
Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 1

Query: 1   MPINYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAAQETPLAKYFGENPV 60
           M I+Y V DLNIT AEGIKGVL+FTNFFFKSKVYAAVSV G   A QETPLAKYFG+NPV
Sbjct: 1   MLIDYRVLDLNITSAEGIKGVLSFTNFFFKSKVYAAVSVDGTPSATQETPLAKYFGKNPV 60

Query: 61  WNFWMRFYLEESKLQENTLTLKIQLRRKRTFG-GDENIAEALIPLRNLFNGNENVMDENY 120
           WN  MRF+LEESKLQEN LTLKI+L+R+RTFG  DE+IAEA IPLRNLFNGNENV +EN 
Sbjct: 61  WNCSMRFHLEESKLQENALTLKIKLKRRRTFGRDDEDIAEASIPLRNLFNGNENVTNENC 120

Query: 121 SYSFLFSKSGGRRGLVYFSYRFGRTYGASAAGDDGGVVAPCL 162
           S SF+ SKSGG RGLVYFSY F RTY AS A DDG  VAP L
Sbjct: 121 SSSFMLSKSGGLRGLVYFSYCFSRTYNASDASDDGATVAPPL 162

BLAST of Cla019918 vs. TrEMBL
Match: A0A0A0LGE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G030090 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.6e-15
Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 1

Query: 9   DLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGI--SPAAQETPLAKYFGENPVWNFWMR 68
           D+NI  A G+K V    N F K  VYA VS+ G     + Q+TP+AK  G +P WN+ M+
Sbjct: 7   DVNIKRANGLKNV----NLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYTMK 66

Query: 69  FYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSYSFL-F 128
           F ++E+ LQ N L LKI+    R+  GD+ I + ++P++ L + + N  DE  S   + F
Sbjct: 67  FTIDEAALQSNRLNLKIKFVSDRSL-GDKKIGKVIVPIKRLLDESANKGDEGKSERTVNF 126

Query: 129 S---KSGGRRGLVYFSYRFGRTYGASA 150
           S    SG  +G V  SY+FG  Y   A
Sbjct: 127 SVRTMSGKEKGNVELSYKFGEKYTVQA 148

BLAST of Cla019918 vs. TrEMBL
Match: A0A022PXA2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011603mg PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-14
Identity = 49/143 (34.27%), Postives = 75/143 (52.45%), Query Frame = 1

Query: 3   INYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAAQETPLAKYFGENPVWN 62
           + Y    +N+  A+GIK V      F K  VYA VS+ G   + ++T + K  G  P WN
Sbjct: 1   MEYRPLKINVISADGIKDV----KLFSKMDVYAQVSIAGYPQSMKKTFVDKNSGTTPKWN 60

Query: 63  FWMRFYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSYS 122
             M F ++E  L +  L+L  QL+ + TFG D+ I  A IP+ +LFN +    ++     
Sbjct: 61  HRMEFIVDEPYLTKPGLSLLFQLKAESTFGSDKEIGSATIPIHDLFNPDSTTQEDRQVEY 120

Query: 123 FLFSKSGGRRGLVYFSYRFGRTY 146
            L + SG  +G + FSY+FG  +
Sbjct: 121 QLHTPSGKSKGSLKFSYQFGEKF 139

BLAST of Cla019918 vs. TrEMBL
Match: A0A161Y5A3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024563 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14
Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 1

Query: 3   INYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAA-QETPLAKYFGENPVW 62
           + Y   D+N+  A+G+K V    N F K +VYA V+V G  P A Q TP  K  G NP W
Sbjct: 1   MEYRTLDVNLIAAKGLKNV----NLFSKLEVYAVVTVFGGDPRAKQRTPTDKINGVNPTW 60

Query: 63  NFWMRFYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSY 122
           NF M+F ++E   Q+N LTL I LR +R   GD+++ E  +P++ +   ++ V   +Y  
Sbjct: 61  NFPMKFTVDEVAAQQNHLTLVITLRAERAL-GDKDVGEVRVPMKEIMVDSKGVQFVSYQ- 120

Query: 123 SFLFSKSGGRRGLVYFSYRF 142
             +   SG  +G + FSY F
Sbjct: 121 --VRKASGKPKGELRFSYEF 132

BLAST of Cla019918 vs. TrEMBL
Match: A0A0D2SM49_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G298900 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-14
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 1

Query: 9   DLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAAQETPLAKYFGENPVWNFWMRFY 68
           +L +  A+ IK V    N F K  VY  VS+ G    AQ+TP+ K  G NP WN  M+F 
Sbjct: 7   ELRVISAKDIKDV----NLFTKMDVYVVVSINGDHRTAQKTPVHKESGSNPNWNCTMKFT 66

Query: 69  LEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLF---NGNENVMDENYSYSFLF 128
           ++E+   +N   L  +L+  R F GD+ I    +P+R L    NGN NV  ++ S+S + 
Sbjct: 67  IDETAAHQNHHNLVFRLKSNRVF-GDKEIGSVQVPIRELLDQENGNGNVDHQHVSFSVML 126

Query: 129 SKSGGRRGLVYFSYRFGRTYGASA 150
           + +G  +G+  F+YRFG  +   A
Sbjct: 127 A-NGKTKGVFNFAYRFGEKFSMPA 144

BLAST of Cla019918 vs. NCBI nr
Match: gi|700205830|gb|KGN60949.1| (hypothetical protein Csa_2G030590 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59
Identity = 124/162 (76.54%), Postives = 134/162 (82.72%), Query Frame = 1

Query: 1   MPINYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAAQETPLAKYFGENPV 60
           M I+Y V DLNIT AEGIKGVL+FTNFFFKSKVYAAVSV G   A QETPLAKYFG+NPV
Sbjct: 1   MLIDYRVLDLNITSAEGIKGVLSFTNFFFKSKVYAAVSVDGTPSATQETPLAKYFGKNPV 60

Query: 61  WNFWMRFYLEESKLQENTLTLKIQLRRKRTFG-GDENIAEALIPLRNLFNGNENVMDENY 120
           WN  MRF+LEESKLQEN LTLKI+L+R+RTFG  DE+IAEA IPLRNLFNGNENV +EN 
Sbjct: 61  WNCSMRFHLEESKLQENALTLKIKLKRRRTFGRDDEDIAEASIPLRNLFNGNENVTNENC 120

Query: 121 SYSFLFSKSGGRRGLVYFSYRFGRTYGASAAGDDGGVVAPCL 162
           S SF+ SKSGG RGLVYFSY F RTY AS A DDG  VAP L
Sbjct: 121 SSSFMLSKSGGLRGLVYFSYCFSRTYNASDASDDGATVAPPL 162

BLAST of Cla019918 vs. NCBI nr
Match: gi|1009116869|ref|XP_015875009.1| (PREDICTED: protein SRC2 homolog [Ziziphus jujuba])

HSP 1 Score: 106.3 bits (264), Expect = 5.1e-20
Identity = 59/155 (38.06%), Postives = 91/155 (58.71%), Query Frame = 1

Query: 3   INYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAAQETPLAKYFGENPVWN 62
           + Y   D+N+TC EG + V N   FF + K+YA VS+VG S   Q+TP+ K+ G    W+
Sbjct: 1   MEYRSLDINVTCLEGFQ-VKNL--FFKRPKIYATVSIVGSSRTTQKTPVGKFAGSFQRWD 60

Query: 63  FWMRFYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSYS 122
           + MRFY+EES LQEN L L I+LR  RT   D+++ E  +P++ LF  N++    +Y   
Sbjct: 61  YPMRFYIEESMLQENCLMLMIRLRSSRTLCRDKDVGEVYVPIKQLFLHNDH---NSYFGY 120

Query: 123 FLFSKSGGRRGLVYFSYRFGRTYGASAAGDDGGVV 158
            + + SG  +G ++FSY+F     +S+      V+
Sbjct: 121 QVHTASGKPKGRLHFSYKFSDRKRSSSLSTSKAVI 149

BLAST of Cla019918 vs. NCBI nr
Match: gi|1021027710|gb|KZM85497.1| (hypothetical protein DCAR_027081 [Daucus carota subsp. sativus])

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15
Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 1

Query: 3   INYGVFDLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGISPAA-QETPLAKYFGENPVW 62
           + Y   DL I  A+G+K V    NF  K +VYA VS+ G  P   Q TP  +  G NP W
Sbjct: 1   MEYRTLDLKIISAKGLKNV----NFISKVEVYAVVSIAGGDPRVKQRTPTDREGGVNPAW 60

Query: 63  NFWMRFYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSY 122
           NF M+F ++E+  Q+N LTL I LR +R   GD ++ E  +P++ +     N   +   Y
Sbjct: 61  NFPMKFTIDEAAAQQNRLTLVISLRAERAL-GDRDVGEVRVPIKEIIGDGNNKSVQFVRY 120

Query: 123 SFLFSKSGGRRGLVYFSYRFGRTYGAS 149
             +   SG  +G + FSY+FG    AS
Sbjct: 121 Q-VRKPSGKAKGELNFSYQFGEKVAAS 141

BLAST of Cla019918 vs. NCBI nr
Match: gi|659070280|ref|XP_008454313.1| (PREDICTED: protein enabled homolog [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 2.9e-15
Identity = 56/147 (38.10%), Postives = 85/147 (57.82%), Query Frame = 1

Query: 9   DLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGI--SPAAQETPLAKYFGENPVWNFWMR 68
           D+NI  A G+K V    N F K  VYA VS+ G     + Q+TP+AK  G +P WN+ M+
Sbjct: 7   DVNIKRANGLKNV----NLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPHWNYPMK 66

Query: 69  FYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFN----GNENVMDENYSYS 128
           F ++E+ LQ N L LKI+    R+F GD+ I + ++P++ L +    G+E   +   ++S
Sbjct: 67  FTVDEAALQNNRLNLKIKFVSDRSF-GDKKIGKVIVPIKRLLDESAKGDEGKSERTVNFS 126

Query: 129 FLFSKSGGRRGLVYFSYRFGRTYGASA 150
            + + SG  +G V FSY+FG  Y   A
Sbjct: 127 -VRTMSGKEKGNVEFSYKFGEKYTVQA 147

BLAST of Cla019918 vs. NCBI nr
Match: gi|778666915|ref|XP_011648839.1| (PREDICTED: actin cytoskeleton-regulatory complex protein PAN1-like [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 1

Query: 9   DLNITCAEGIKGVLNFTNFFFKSKVYAAVSVVGI--SPAAQETPLAKYFGENPVWNFWMR 68
           D+NI  A G+K V    N F K  VYA VS+ G     + Q+TP+AK  G +P WN+ M+
Sbjct: 7   DVNIKRANGLKNV----NLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYTMK 66

Query: 69  FYLEESKLQENTLTLKIQLRRKRTFGGDENIAEALIPLRNLFNGNENVMDENYSYSFL-F 128
           F ++E+ LQ N L LKI+    R+  GD+ I + ++P++ L + + N  DE  S   + F
Sbjct: 67  FTIDEAALQSNRLNLKIKFVSDRSL-GDKKIGKVIVPIKRLLDESANKGDEGKSERTVNF 126

Query: 129 S---KSGGRRGLVYFSYRFGRTYGASA 150
           S    SG  +G V  SY+FG  Y   A
Sbjct: 127 SVRTMSGKEKGNVELSYKFGEKYTVQA 148

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SRC2_SOYBN1.4e-1437.91Protein SRC2 OS=Glycine max GN=SRC2 PE=2 SV=1[more]
SRC2_ARATH1.5e-1129.37Protein SRC2 homolog OS=Arabidopsis thaliana GN=SRC2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LIU2_CUCSA2.3e-5976.54Uncharacterized protein OS=Cucumis sativus GN=Csa_2G030590 PE=4 SV=1[more]
A0A0A0LGE9_CUCSA7.6e-1538.78Uncharacterized protein OS=Cucumis sativus GN=Csa_2G030090 PE=4 SV=1[more]
A0A022PXA2_ERYGU1.7e-1434.27Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011603mg PE=4 SV=1[more]
A0A161Y5A3_DAUCA2.2e-1437.86Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024563 PE=4 SV=1[more]
A0A0D2SM49_GOSRA3.8e-1436.11Uncharacterized protein OS=Gossypium raimondii GN=B456_007G298900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700205830|gb|KGN60949.1|3.2e-5976.54hypothetical protein Csa_2G030590 [Cucumis sativus][more]
gi|1009116869|ref|XP_015875009.1|5.1e-2038.06PREDICTED: protein SRC2 homolog [Ziziphus jujuba][more]
gi|1021027710|gb|KZM85497.1|1.3e-1537.41hypothetical protein DCAR_027081 [Daucus carota subsp. sativus][more]
gi|659070280|ref|XP_008454313.1|2.9e-1538.10PREDICTED: protein enabled homolog [Cucumis melo][more]
gi|778666915|ref|XP_011648839.1|1.1e-1438.78PREDICTED: actin cytoskeleton-regulatory complex protein PAN1-like [Cucumis sati... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006820 anion transport
biological_process GO:0071705 nitrogen compound transport
biological_process GO:0071702 organic substance transport
biological_process GO:0050789 regulation of biological process
biological_process GO:0050896 response to stimulus
biological_process GO:0044763 single-organism cellular process
biological_process GO:1902582 single-organism intracellular transport
biological_process GO:0006811 ion transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0032586 protein storage vacuole membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0044464 cell part
cellular_component GO:0005575 cellular_component
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005773 vacuole
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla019918Cla019918.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainGENE3DG3DSA:2.60.40.150coord: 30..119
score: 4.
IPR000008C2 domainPFAMPF00168C2coord: 7..112
score: 4.
IPR000008C2 domainunknownSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 5..144
score: 2.87
NoneNo IPR availablePANTHERPTHR32246FAMILY NOT NAMEDcoord: 1..143
score: 6.3
NoneNo IPR availablePANTHERPTHR32246:SF18C2 DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..143
score: 6.3

The following gene(s) are paralogous to this gene:

None