Carg17533 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17533
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein SRC2-like
Location	Cucurbita_argyrosperma_scaffold_183 : 61080 .. 61571 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTACAGAGCATTCAAAGTAAACGTTACCTGTGTCGAAGGAATCGAAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCGGAGACTTGCTGGCCAACCAAGAAACGCCGCTTGCGAAGTACTTCGGTGAAAATCCAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTACAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAATACATTGCAGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTACTGTTCATCGTGGTTGCTTTCGCCATCTGGCGGCCGTCGTGGTTTTGTGTATTTTTCGTATTACTTTAGTCGGACATACGCTGCCACCGCCGAGAGTGACGGTAACAGCATAGTTGCTCCACTGTCTGCTTGGGATTGTTAA

mRNA sequence

ATGGATTACAGAGCATTCAAAGTAAACGTTACCTGTGTCGAAGGAATCGAAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCGGAGACTTGCTGGCCAACCAAGAAACGCCGCTTGCGAAGTACTTCGGTGAAAATCCAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTACAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAATACATTGCAGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTACTGTTCATCGTGGTTGCTTTCGCCATCTGGCGGCCGTCGTGGTTTTGTGTATTTTTCGTATTACTTTAGTCGGACATACGCTGCCACCGCCGAGAGTGACGGTAACAGCATAGTTGCTCCACTGTCTGCTTGGGATTGTTAA

Coding sequence (CDS)

ATGGATTACAGAGCATTCAAAGTAAACGTTACCTGTGTCGAAGGAATCGAAGGAGTTCTAAGTTTCGTCAATTTCTTCCACAAATCCAAAGTCTATGCGGCGGTTTCCATCACCGGAGACTTGCTGGCCAACCAAGAAACGCCGCTTGCGAAGTACTTCGGTGAAAATCCAGTGTGGAATTGGCCGATGAAGTTTTATTTGAAGGAATCGAAGCTACAGGAAAATGCCCTAACTCTGAGGATTCAACTGAGGCGAAAACGAATTTTCGGAGGAGACGAATACATTGCAGAAGCTTTGGTTCCGTTGAAGAATCTTTTTGATGGCAACAAGAATGTGATGGATGAAAATTACTGTTCATCGTGGTTGCTTTCGCCATCTGGCGGCCGTCGTGGTTTTGTGTATTTTTCGTATTACTTTAGTCGGACATACGCTGCCACCGCCGAGAGTGACGGTAACAGCATAGTTGCTCCACTGTCTGCTTGGGATTGTTAA

Protein sequence

MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWNWPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSSWLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAWDC

Homology

[Close]

BLAST of Carg17533 vs. NCBI nr
Match: XP_022938307.1 (protein SRC2 [Cucurbita moschata])

HSP 1 Score: 341.7 bits (875), Expect = 1.4e-90
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN
Sbjct: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120
           WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS
Sbjct: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120

Query: 121 WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAWDC 164
           WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAWDC
Sbjct: 121 WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAWDC 163

[Close]

BLAST of Carg17533 vs. NCBI nr
Match: KGN60949.1 (hypothetical protein Csa_2G030590 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51
Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           +DYR   +N+T  EGI+GVLSF NFF KSKVYAAVS+ G   A QETPLAKYFG+NPVWN
Sbjct: 3   IDYRVLDLNITSAEGIKGVLSFTNFFFKSKVYAAVSVDGTPSATQETPLAKYFGKNPVWN 62

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFG-GDEYIAEALVPLKNLFDGNKNVMDENYCS 120
             M+F+L+ESKLQENALTL+I+L+R+R FG  DE IAEA +PL+NLF+GN+NV +EN  S
Sbjct: 63  CSMRFHLEESKLQENALTLKIKLKRRRTFGRDDEDIAEASIPLRNLFNGNENVTNENCSS 122

Query: 121 SWLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAWD 163
           S++LS SGG RG VYFSY FSRTY A+  SD  + VAP  A++
Sbjct: 123 SFMLSKSGGLRGLVYFSYCFSRTYNASDASDDGATVAPPLAFE 165

[Close]

BLAST of Carg17533 vs. NCBI nr
Match: XP_022150754.1 (protein SRC2 [Momordica charantia])

HSP 1 Score: 209.9 bits (533), Expect = 6.4e-51
Identity = 104/159 (65.41%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 2   DYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWNW 61
           D+R F +N+TC EG +GVLSFVNFF K+KVYAAVS+ G   A Q TPLA YFG+NPVWN+
Sbjct: 4   DFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAVQFTPLANYFGDNPVWNF 63

Query: 62  PMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLF---DGNKNVMDENYC 121
           PM+F L+ES+LQ++ALTLRI+LRRKRIFGGDE IAEA V L NL    D N N MD+   
Sbjct: 64  PMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVRLGNLLNCNDSNLNFMDQICG 123

Query: 122 SSWLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAP 158
            SWLLSP+GGRRG +YFSY F RT  AT  SDG  +VAP
Sbjct: 124 FSWLLSPAGGRRGILYFSYCFGRTIRATERSDGGGVVAP 162

[Close]

BLAST of Carg17533 vs. NCBI nr
Match: XP_015875009.1 (protein SRC2 homolog [Ziziphus jujuba])

HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20
Identity = 59/155 (38.06%), Postives = 92/155 (59.35%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           M+YR+  +NVTC+EG + V +   FF + K+YA VSI G     Q+TP+ K+ G    W+
Sbjct: 1   MEYRSLDINVTCLEGFQ-VKNL--FFKRPKIYATVSIVGSSRTTQKTPVGKFAGSFQRWD 60

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120
           +PM+FY++ES LQEN L L I+LR  R    D+ + E  VP+K LF  N +    +Y   
Sbjct: 61  YPMRFYIEESMLQENCLMLMIRLRSSRTLCRDKDVGEVYVPIKQLFLHNDH---NSYFGY 120

Query: 121 WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIV 156
            + + SG  +G ++FSY FS    +++ S   +++
Sbjct: 121 QVHTASGKPKGRLHFSYKFSDRKRSSSLSTSKAVI 149

[Close]

BLAST of Carg17533 vs. NCBI nr
Match: PON59903.1 (C2 domain containing protein [Parasponia andersonii])

HSP 1 Score: 101.7 bits (252), Expect = 2.5e-18
Identity = 61/150 (40.67%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSI-TGDLLANQETPLAKYF-GENPV 60
           M+YR+ ++N++ +E ++      +FF K++VYA VSI T       +TPLAK+  G+N V
Sbjct: 1   MEYRSLEINLSSLEFVKQPRIINDFFFKTRVYAVVSIVTTTSTTRLKTPLAKFINGKNHV 60

Query: 61  WN--WPMKFYLKESKLQENALTLRIQLRRKRIFGGD-EYIAEALVPLKNLFDGNKN---- 120
           W   +P +FY+ ESKLQ++ +TL IQ+R+KR F  D + + E  VPLK LFD + N    
Sbjct: 61  WELYFPTRFYVDESKLQQDTVTLMIQIRKKRHFCMDNDDVGEVHVPLKELFDPDMNPPND 120

Query: 121 -VMDENYCSSWLLSPSGGRRGFVYFSYYFS 141
            V+    C   + S SG  +G+++FSY FS
Sbjct: 121 IVISNCSCCHVVTSTSGKPKGYLHFSYKFS 150

[Close]

BLAST of Carg17533 vs. TAIR10
Match: AT1G09070.1 (soybean gene regulated by cold-2)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13
Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           M+ R+  + +   E ++     V    K  +YA VSI GD    Q+T + K  G  P W 
Sbjct: 1   MECRSLDLTIISAEDLKD----VQLIGKQDLYAVVSINGDARTKQKTKVDKDCGTKPKWK 60

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120
             MK  + ++  ++N LTL  ++   R   GD+ + E  VP+K L D NK   DE    +
Sbjct: 61  HQMKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKG--DEEKTVT 120

Query: 121 WLLS-PSGGRRGFVYFSYYFSRTYAATAES 150
           + +  P+G  +G + FS+ F   Y   + S
Sbjct: 121 YAVRLPNGKAKGSLKFSFKFGEKYTYGSSS 144

[Close]

BLAST of Carg17533 vs. TAIR10
Match: AT3G05440.1 (C2 domain-containing protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.7e-10
Identity = 29/99 (29.29%), Postives = 52/99 (52.53%), Query Frame = 0


Query: 3   YRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWNWP 62
           Y+  ++NV   +     L+ +N   +  VY +VS+T      Q TP A +  +   WN+ 
Sbjct: 4   YQPVEINVLSAQD----LNSINLLFRPTVYVSVSVTRGSRDKQVTPAAAWDKKFLRWNYR 63

Query: 63  MKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVP 102
           MKFY+++ K++ N      Q++ KR FG D+ + +  +P
Sbjct: 64  MKFYIEDDKVRRNESVFVFQIKCKRFFGSDQVVGKLFIP 98

[Close]

BLAST of Carg17533 vs. Swiss-Prot
Match: sp|O04133|SRC2_SOYBN (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-15
Identity = 55/149 (36.91%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQ--ETPLAKYFGENPV 60
           M+YR  ++N+   + I+     VN F K  VYAAVS++GD L  Q   T + K  G NP 
Sbjct: 3   MEYRTLELNIISAKDIKN----VNLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSNPT 62

Query: 61  WNWPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYC 120
           WN+P+KF + ES  +EN L+L I+L   R   GD  I    VPL+ L D   +       
Sbjct: 63  WNYPVKFSVNESLAKENRLSLEIKLISDRTL-GDTVIGTVHVPLRELLDNPGDDSSFRQV 122

Query: 121 SSWLLSPSGGRRGFVYFSYYFSRTYAATA 148
           S  ++  S   +G + FSY F     A A
Sbjct: 123 SYQVMKQSRKSKGSLNFSYKFGEHVPAPA 146

[Close]

BLAST of Carg17533 vs. Swiss-Prot
Match: sp|O04023|SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           M+ R+  + +   E ++     V    K  +YA VSI GD    Q+T + K  G  P W 
Sbjct: 1   MECRSLDLTIISAEDLKD----VQLIGKQDLYAVVSINGDARTKQKTKVDKDCGTKPKWK 60

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120
             MK  + ++  ++N LTL  ++   R   GD+ + E  VP+K L D NK   DE    +
Sbjct: 61  HQMKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKG--DEEKTVT 120

Query: 121 WLLS-PSGGRRGFVYFSYYFSRTYAATAES 150
           + +  P+G  +G + FS+ F   Y   + S
Sbjct: 121 YAVRLPNGKAKGSLKFSFKFGEKYTYGSSS 144

[Close]

BLAST of Carg17533 vs. TrEMBL
Match: tr|A0A0A0LIU2|A0A0A0LIU2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030590 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.2e-51
Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           +DYR   +N+T  EGI+GVLSF NFF KSKVYAAVS+ G   A QETPLAKYFG+NPVWN
Sbjct: 3   IDYRVLDLNITSAEGIKGVLSFTNFFFKSKVYAAVSVDGTPSATQETPLAKYFGKNPVWN 62

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFG-GDEYIAEALVPLKNLFDGNKNVMDENYCS 120
             M+F+L+ESKLQENALTL+I+L+R+R FG  DE IAEA +PL+NLF+GN+NV +EN  S
Sbjct: 63  CSMRFHLEESKLQENALTLKIKLKRRRTFGRDDEDIAEASIPLRNLFNGNENVTNENCSS 122

Query: 121 SWLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAWD 163
           S++LS SGG RG VYFSY FSRTY A+  SD  + VAP  A++
Sbjct: 123 SFMLSKSGGLRGLVYFSYCFSRTYNASDASDDGATVAPPLAFE 165

[Close]

BLAST of Carg17533 vs. TrEMBL
Match: tr|A0A2P5CFS7|A0A2P5CFS7_PARAD (C2 domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_156220 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-18
Identity = 61/150 (40.67%), Postives = 93/150 (62.00%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSI-TGDLLANQETPLAKYF-GENPV 60
           M+YR+ ++N++ +E ++      +FF K++VYA VSI T       +TPLAK+  G+N V
Sbjct: 1   MEYRSLEINLSSLEFVKQPRIINDFFFKTRVYAVVSIVTTTSTTRLKTPLAKFINGKNHV 60

Query: 61  WN--WPMKFYLKESKLQENALTLRIQLRRKRIFGGD-EYIAEALVPLKNLFDGNKN---- 120
           W   +P +FY+ ESKLQ++ +TL IQ+R+KR F  D + + E  VPLK LFD + N    
Sbjct: 61  WELYFPTRFYVDESKLQQDTVTLMIQIRKKRHFCMDNDDVGEVHVPLKELFDPDMNPPND 120

Query: 121 -VMDENYCSSWLLSPSGGRRGFVYFSYYFS 141
            V+    C   + S SG  +G+++FSY FS
Sbjct: 121 IVISNCSCCHVVTSTSGKPKGYLHFSYKFS 150

[Close]

BLAST of Carg17533 vs. TrEMBL
Match: tr|A0A2P5E862|A0A2P5E862_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_225130 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.1e-18
Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSI-TGDLLANQETPLAKYF-GENPV 60
           M+YR+ ++N++ +E ++      +FF K++VYA VSI T       ++PLAK+  G+N V
Sbjct: 1   MEYRSLEINLSSLEFLKQPRIINDFFLKTRVYAVVSIVTATSATTLKSPLAKFINGKNNV 60

Query: 61  WNW--PMKFYLKESKLQENALTLRIQLRRKRIFGGD-EYIAEALVPLKNLFDGNKN---- 120
           W    P +FY+ ESKLQ++++TL IQ+R+KR F  D + + E  VPLK LFD + N    
Sbjct: 61  WELYSPTRFYVDESKLQQDSVTLMIQIRKKRHFCMDNDDVGEVHVPLKELFDRDMNPPND 120

Query: 121 -VMDENYCSSWLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSI 155
            V++   C   + S SG  +G+++FSY FS      A  D +++
Sbjct: 121 IVINNCSCCHVVTSTSGKPKGYLHFSYKFSDKLYRRAVRDSDNV 164

[Close]

BLAST of Carg17533 vs. TrEMBL
Match: tr|A0A2G5F0H5|A0A2G5F0H5_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00300796v1 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.0e-17
Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           M+YR  ++NV   + ++     VN F K  VYA VSI+GDL + Q+TP+    G+NP WN
Sbjct: 1   MEYRPLEINVISAKDLKD----VNLFSKMDVYAVVSISGDLRSKQKTPVDHNSGKNPTWN 60

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120
           + +KF + E++ ++N L L  QL+ +R   GD+ I E  VP+K + D   +     + S 
Sbjct: 61  YTIKFTIDENRAKQNHLILVFQLKSERSL-GDKDIGEVHVPIKEILDNLGDGKAPQFVSY 120

Query: 121 WLLSPSGGRRGFVYFSYYFSRTYAATAESDGNSIVAPLSAW 162
            +  P G  +G + FSY F             S   P++A+
Sbjct: 121 QVRKPDGKSKGVLNFSYKFGEKIVGEIPKSKASDDEPVTAY 156

[Close]

BLAST of Carg17533 vs. TrEMBL
Match: tr|F6HE67|F6HE67_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01400 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16
Identity = 54/139 (38.85%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 1   MDYRAFKVNVTCVEGIEGVLSFVNFFHKSKVYAAVSITGDLLANQETPLAKYFGENPVWN 60
           M+YR  ++NV   + ++     VN   K  VY  VSI GD  + Q+TP+ +  G NP WN
Sbjct: 1   MEYRTLEINVISAKDLKD----VNLISKMDVYVVVSINGDSRSKQKTPVDRDGGTNPTWN 60

Query: 61  WPMKFYLKESKLQENALTLRIQLRRKRIFGGDEYIAEALVPLKNLFDGNKNVMDENYCSS 120
           +PMKF + ES  Q+N LTL  +LR +R   GD+ I E  VP+K L D         + S 
Sbjct: 61  FPMKFTVDESAAQQNRLTLSFKLRCERTL-GDKDIGEVNVPIKELLDPAGESKPIQFVSY 120

Query: 121 WLLSPSGGRRGFVYFSYYF 140
            +  PSG  +G +  SY F
Sbjct: 121 QVRKPSGKPKGELNLSYKF 134

The following BLAST results are available for this feature:

BLAST of Carg17533 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938307.1	1.4e-90	100.00	protein SRC2 [Cucurbita moschata]	[more]
KGN60949.1	4.9e-51	64.42	hypothetical protein Csa_2G030590 [Cucumis sativus]	[more]
XP_022150754.1	6.4e-51	65.41	protein SRC2 [Momordica charantia]	[more]
XP_015875009.1	1.2e-20	38.06	protein SRC2 homolog [Ziziphus jujuba]	[more]
PON59903.1	2.5e-18	40.67	C2 domain containing protein [Parasponia andersonii]	[more]

BLAST of Carg17533 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09070.1	1.3e-13	30.00	soybean gene regulated by cold-2	[more]
AT3G05440.1	6.7e-10	29.29	C2 domain-containing protein	[more]

BLAST of Carg17533 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04133\|SRC2_SOYBN	1.0e-15	36.91	Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1	[more]
sp\|O04023\|SRC2_ARATH	2.3e-12	30.00	Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1	[more]

BLAST of Carg17533 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIU2\|A0A0A0LIU2_CUCSA	3.2e-51	64.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030590 PE=4 SV=1	[more]
tr\|A0A2P5CFS7\|A0A2P5CFS7_PARAD	1.6e-18	40.67	C2 domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_1562...	[more]
tr\|A0A2P5E862\|A0A2P5E862_9ROSA	2.1e-18	37.80	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_225130 PE=4 S...	[more]
tr\|A0A2G5F0H5\|A0A2G5F0H5_AQUCA	4.0e-17	33.54	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00300796v1 PE=4...	[more]
tr\|F6HE67\|F6HE67_VITVI	1.5e-16	38.85	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01400 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR035892	C2_domain_sf
IPR000008	C2_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17533-RA	Carg17533-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 8..110 e-value: 1.3E-5 score: 25.3
IPR035892	C2 domain superfamily	GENE3D	G3DSA:2.60.40.150		coord: 7..140 e-value: 3.8E-9 score: 38.8
None	No IPR available	PANTHER	PTHR32246:SF18	C2 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..147
None	No IPR available	PANTHER	PTHR32246	FAMILY NOT NAMED	coord: 1..147
None	No IPR available	SUPERFAMILY	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 20..140

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17533	Cla019918	Watermelon (97103) v1	carwmB0714
Carg17533	Csa2G030590	Cucumber (Chinese Long) v2	carcuB0735
Carg17533	ClCG02G015510	Watermelon (Charleston Gray)	carwcgB0692
Carg17533	CSPI02G04230	Wild cucumber (PI 183967)	carcpiB0751
Carg17533	Cucsa.091150	Cucumber (Gy14) v1	carcgyB0803
Carg17533	CmaCh12G010640	Cucurbita maxima (Rimu)	carcmaB1000
Carg17533	CmoCh12G010780	Cucurbita moschata (Rifu)	carcmoB0973
Carg17533	Lsi11G005820	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17533	Cp4.1LG07g09010	Cucurbita pepo (Zucchini)	carcpeB1006
Carg17533	CsGy2G004360	Cucumber (Gy14) v2	carcgybB0713
Carg17533	CsaV3_2G006570	Cucumber (Chinese Long) v3	carcucB0754
Carg17533	Bhi06G001283	Wax gourd	carwgoB0842

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17533	Melon (DHL92) v3.5.1	carmeB0711
Carg17533	Melon (DHL92) v3.6.1	carmedB0724
Carg17533	Watermelon (97103) v2	carwmbB0746