CsGy2G004340 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G004340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein SRC2-like
Location	Chr2 : 3016447 .. 3017301 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTGTAGAACTTTAGATGTCAACATCAAGAGAGCCAACGGCCTCAAGAATGTCAATCTCTTCTCAAAGATGGATGTATACGCTGTCGTTTCCATCTCCGGTGATCCTCGCGGGAAGTCGAAGCAGAAGACTCCTGTAGCTAAAGAAGGCGGTTCGGATCCTTACTGGAACTATACCATGAAGTTCACAATCGATGAGGCTGCCTTACAGAGCAATCGACTCAATCTGAAGATCAAATTCGTTTCCGATCGGAGTTTAGGCGATAAGAAGATCGGGAAGGTTATTGTTCCGATTAAGCGATTGCTCGATGAAAGTGTTAATAAAGGAGATGAGGGAAAATCTGAGAGAACCGTTAATTTCAGCGTCAGGACTATGAGCGGAAAGGAAAAAGGTAACGTCGAATTATCGTATAAATTTGGGGAAAAATACACGGTTCAAGCACCGCCGCCACCGCCTCCTGCTATGAAATCCGGTGAGCCGATGACTGCTTATCCTCAAGGTTATGCTGGATCTAGTTCCGGATATCCGGCAGGAGGTGCTTATCCCCCTGCGCCAGGGACTGCTTACGCGTATCCGCCTCCGCCTCAAGGGTACGGTTATCCACCGCCTCCACAGGCTGGATATGCGTATGGCGGTTACCCACCGCCGCCGCAGGCAGGGTATGGATATGCGCCGGTGCATCAGGCACAGAGGCCACATAAGAGCGGTGGTGGTTTTGGTGGTATGGCTTTGGGAGCCGGAGCTGGACTTCTGGGTGGTTTACTGATCGGCGAAGCGATTTCCGATGTCGGTGATATGGCGGCTTATGATGCCGGATATGATGCTGGTTTTGGTGATGGTTTTGATTTCTAA

mRNA sequence

ATGGAGTGTAGAACTTTAGATGTCAACATCAAGAGAGCCAACGGCCTCAAGAATGTCAATCTCTTCTCAAAGATGGATGTATACGCTGTCGTTTCCATCTCCGGTGATCCTCGCGGGAAGTCGAAGCAGAAGACTCCTGTAGCTAAAGAAGGCGGTTCGGATCCTTACTGGAACTATACCATGAAGTTCACAATCGATGAGGCTGCCTTACAGAGCAATCGACTCAATCTGAAGATCAAATTCGTTTCCGATCGGAGTTTAGGCGATAAGAAGATCGGGAAGGTTATTGTTCCGATTAAGCGATTGCTCGATGAAAGTGTTAATAAAGGAGATGAGGGAAAATCTGAGAGAACCGTTAATTTCAGCGTCAGGACTATGAGCGGAAAGGAAAAAGGTAACGTCGAATTATCGTATAAATTTGGGGAAAAATACACGGTTCAAGCACCGCCGCCACCGCCTCCTGCTATGAAATCCGGTGAGCCGATGACTGCTTATCCTCAAGGTTATGCTGGATCTAGTTCCGGATATCCGGCAGGAGGTGCTTATCCCCCTGCGCCAGGGACTGCTTACGCGTATCCGCCTCCGCCTCAAGGGTACGGTTATCCACCGCCTCCACAGGCTGGATATGCGTATGGCGGTTACCCACCGCCGCCGCAGGCAGGGTATGGATATGCGCCGGTGCATCAGGCACAGAGGCCACATAAGAGCGGTGGTGGTTTTGGTGGTATGGCTTTGGGAGCCGGAGCTGGACTTCTGGGTGGTTTACTGATCGGCGAAGCGATTTCCGATGTCGGTGATATGGCGGCTTATGATGCCGGATATGATGCTGGTTTTGGTGATGGTTTTGATTTCTAA

Coding sequence (CDS)

ATGGAGTGTAGAACTTTAGATGTCAACATCAAGAGAGCCAACGGCCTCAAGAATGTCAATCTCTTCTCAAAGATGGATGTATACGCTGTCGTTTCCATCTCCGGTGATCCTCGCGGGAAGTCGAAGCAGAAGACTCCTGTAGCTAAAGAAGGCGGTTCGGATCCTTACTGGAACTATACCATGAAGTTCACAATCGATGAGGCTGCCTTACAGAGCAATCGACTCAATCTGAAGATCAAATTCGTTTCCGATCGGAGTTTAGGCGATAAGAAGATCGGGAAGGTTATTGTTCCGATTAAGCGATTGCTCGATGAAAGTGTTAATAAAGGAGATGAGGGAAAATCTGAGAGAACCGTTAATTTCAGCGTCAGGACTATGAGCGGAAAGGAAAAAGGTAACGTCGAATTATCGTATAAATTTGGGGAAAAATACACGGTTCAAGCACCGCCGCCACCGCCTCCTGCTATGAAATCCGGTGAGCCGATGACTGCTTATCCTCAAGGTTATGCTGGATCTAGTTCCGGATATCCGGCAGGAGGTGCTTATCCCCCTGCGCCAGGGACTGCTTACGCGTATCCGCCTCCGCCTCAAGGGTACGGTTATCCACCGCCTCCACAGGCTGGATATGCGTATGGCGGTTACCCACCGCCGCCGCAGGCAGGGTATGGATATGCGCCGGTGCATCAGGCACAGAGGCCACATAAGAGCGGTGGTGGTTTTGGTGGTATGGCTTTGGGAGCCGGAGCTGGACTTCTGGGTGGTTTACTGATCGGCGAAGCGATTTCCGATGTCGGTGATATGGCGGCTTATGATGCCGGATATGATGCTGGTTTTGGTGATGGTTTTGATTTCTAA

Protein sequence

MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYTMKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVNFSVRTMSGKEKGNVELSYKFGEKYTVQAPPPPPPAMKSGEPMTAYPQGYAGSSSGYPAGGAYPPAPGTAYAYPPPPQGYGYPPPPQAGYAYGGYPPPPQAGYGYAPVHQAQRPHKSGGGFGGMALGAGAGLLGGLLIGEAISDVGDMAAYDAGYDAGFGDGFDF

Homology

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BLAST of CsGy2G004340 vs. NCBI nr
Match: XP_011648839.1 (PREDICTED: actin cytoskeleton-regulatory complex protein PAN1-like [Cucumis sativus] >KGN60948.1 hypothetical protein Csa_2G030090 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT
Sbjct: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDES NKGDEGKSERTVN
Sbjct: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESANKGDEGKSERTVN 120

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180
           FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG
Sbjct: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180

Query: 181 AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF 240
           AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF
Sbjct: 181 AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF 240

Query: 241 GGM 244
           GGM
Sbjct: 241 GGM 243

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BLAST of CsGy2G004340 vs. NCBI nr
Match: XP_008454313.1 (PREDICTED: protein SRC2-like [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 6.9e-93
Identity = 226/243 (93.00%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDP+WNY 
Sbjct: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPHWNYP 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           MKFT+DEAALQ+NRLNLKIKFVSDRS GDKKIGKVIVPIKRLLDES  KGDEGKSERTVN
Sbjct: 61  MKFTVDEAALQNNRLNLKIKFVSDRSFGDKKIGKVIVPIKRLLDESA-KGDEGKSERTVN 120

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180
           FSVRTMSGKEKGNVE SYKFGEKYTVQAXXXXXXXMKSGEP+TAYPQGY GSSSGYPAGG
Sbjct: 121 FSVRTMSGKEKGNVEFSYKFGEKYTVQAXXXXXXXMKSGEPVTAYPQGYPGSSSGYPAGG 180

Query: 181 AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF 240
           AY      XXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKS GGF
Sbjct: 181 AYXXXXXXXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKS-GGF 240

Query: 241 GGM 244
           GGM
Sbjct: 241 GGM 241

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BLAST of CsGy2G004340 vs. NCBI nr
Match: XP_022946248.1 (protein SRC2-like [Cucurbita moschata])

HSP 1 Score: 297.7 bits (761), Expect = 4.1e-77
Identity = 163/192 (84.90%), Postives = 172/192 (89.58%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECRTLD+NIKRA GLKNVNLFS MDVYAVVSISGDPRGKSKQ+TPVAK+ GSDPYWN+ 
Sbjct: 1   MECRTLDINIKRAYGLKNVNLFSTMDVYAVVSISGDPRGKSKQRTPVAKDSGSDPYWNFP 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           MKFTIDEAA QSNRLNLKIKFVS RSLGD+KIGKVIVPIKRLLDES  KGDEGKSERT+ 
Sbjct: 61  MKFTIDEAAAQSNRLNLKIKFVSSRSLGDRKIGKVIVPIKRLLDESA-KGDEGKSERTLT 120

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQA----XXXXXXXMKSGEPMTAYPQGYAGSSSGY 180
           FSVRT+SGKEKG VE SYKFGEKYTVQA    XXXXXXXMKSGEP+TAYP GY GSSSGY
Sbjct: 121 FSVRTLSGKEKGTVEFSYKFGEKYTVQAXXXXXXXXXXXMKSGEPVTAYPLGYPGSSSGY 180

Query: 181 PAGGAYPPAPGT 189
            AGGA+PP  GT
Sbjct: 181 AAGGAHPPPAGT 191

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BLAST of CsGy2G004340 vs. NCBI nr
Match: XP_022999033.1 (protein SRC2-like [Cucurbita maxima])

HSP 1 Score: 295.4 bits (755), Expect = 2.0e-76
Identity = 159/188 (84.57%), Postives = 168/188 (89.36%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECRTLD+NIKRA GLKNVNLFS MDVYAVVSISGDPRGKSKQ+TPVAK+ GSDPYWNY 
Sbjct: 1   MECRTLDINIKRAYGLKNVNLFSTMDVYAVVSISGDPRGKSKQRTPVAKDSGSDPYWNYP 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           MKFTIDEAA QSNRLNLKIKFVS RSLGD+KIGKV+VPIKRLLDES  KGDEGKSERT+ 
Sbjct: 61  MKFTIDEAAAQSNRLNLKIKFVSSRSLGDRKIGKVVVPIKRLLDESA-KGDEGKSERTLT 120

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180
           FSVRT+SGKEKG VE SYKFGEKYTVQAXXXXXXX    EP+TAYP GY GSSSGY AGG
Sbjct: 121 FSVRTLSGKEKGTVEFSYKFGEKYTVQAXXXXXXXXXXXEPVTAYPLGYPGSSSGYAAGG 180

Query: 181 AYPPAPGT 189
           A+PP  GT
Sbjct: 181 AHPPPAGT 187

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BLAST of CsGy2G004340 vs. NCBI nr
Match: XP_023545314.1 (protein SRC2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 4.5e-76
Identity = 161/190 (84.74%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECRTLD+NIKRA GLKNVNLFS MDVYAVVSISGDPRGKSKQ+TPVAK+ GSDPYWN+ 
Sbjct: 1   MECRTLDINIKRAYGLKNVNLFSTMDVYAVVSISGDPRGKSKQRTPVAKDSGSDPYWNFP 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           MKFTIDEAA QS+RLNLKIKFVS RSLGD+KIGKVIVPIKRLLDES  KGDEGKSERT+ 
Sbjct: 61  MKFTIDEAAAQSDRLNLKIKFVSSRSLGDRKIGKVIVPIKRLLDESA-KGDEGKSERTLT 120

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQA--XXXXXXXMKSGEPMTAYPQGYAGSSSGYPA 180
           FSVRT+SGKEKG VE SYKFGEKYTVQA  XXXXXXX KSGEP+TAYP GY GSSSGY A
Sbjct: 121 FSVRTLSGKEKGTVEFSYKFGEKYTVQAXXXXXXXXXXKSGEPVTAYPLGYPGSSSGYAA 180

Query: 181 GGAYPPAPGT 189
           GGA+PP  GT
Sbjct: 181 GGAHPPPAGT 189

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BLAST of CsGy2G004340 vs. TAIR10
Match: AT1G09070.1 (soybean gene regulated by cold-2)

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-37
Identity = 92/197 (46.70%), Postives = 125/197 (63.45%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECR+LD+ I  A  LK+V L  K D+YAVVSI+GD R  +KQKT V K+ G+ P W + 
Sbjct: 1   MECRSLDLTIISAEDLKDVQLIGKQDLYAVVSINGDAR--TKQKTKVDKDCGTKPKWKHQ 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSL-GDKKIGKVIVPIKRLLDESVNKGDEGKSERTV 120
           MK T+D+AA + NRL L  + V+DR + GDK +G+V VP+K LLD+  NKGDE   E+TV
Sbjct: 61  MKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQ--NKGDE---EKTV 120

Query: 121 NFSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSG-------EPMTAYPQGYAGS 180
            ++VR  +GK KG+++ S+KFGEKYT  +       + S        +P+TAYP G+ G+
Sbjct: 121 TYAVRLPNGKAKGSLKFSFKFGEKYTYGSSSGPHAPVPSAMDHKTMDQPVTAYPPGH-GA 180

Query: 181 SSGYP-----AGGAYPP 185
            S YP         YPP
Sbjct: 181 PSAYPXXXXXXXSGYPP 189

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BLAST of CsGy2G004340 vs. TAIR10
Match: AT3G16510.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 118.6 bits (296), Expect = 6.1e-27
Identity = 63/140 (45.00%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 5   TLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKS-KQKTPVAKEGGSDPYWNYTMKF 64
           TL++N+  A  L+NVNL +KMDVYAVV I+GD   K+ K+KTP+ + G S+P WN+T+KF
Sbjct: 5   TLELNVYSAKDLENVNLITKMDVYAVVWITGDDSRKNHKEKTPIDRTGESEPTWNHTVKF 64

Query: 65  TIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSE---RTVN 124
           ++D+      RL L +K V DR  GDK +G+V VP+  LL  S +    G  +   R V 
Sbjct: 65  SVDQRLAHEGRLTLVVKLVCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQGMMRFVT 124

Query: 125 FSVRTMSGKEKGNVELSYKF 141
           + VRT  GK +G++  SY+F
Sbjct: 125 YQVRTPFGKGQGSLTFSYRF 144

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BLAST of CsGy2G004340 vs. TAIR10
Match: AT4G15755.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-23
Identity = 56/140 (40.00%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 5   TLDVNIKRANGLKNVNLFSKMDVYAVVSISGD-PRGKSKQKTPVAKEGGSDPYWNYTMKF 64
           TL++NI  A  L NVNL +KM+V+  ++I+G+  R K K KT V + GGS+P WN T+KF
Sbjct: 5   TLELNINSARNLLNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQTIKF 64

Query: 65  TIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLD---ESVNKGDEGKSERTVN 124
           ++DE + +    +L ++ +S R LG+K+IG+V +P+  LL+    S N        + ++
Sbjct: 65  SVDERSARGGHSSLVMRVISRRVLGNKEIGRVNIPLLELLNATTPSFNGDGNDHEMKLMS 124

Query: 125 FSVRTMSGKEKGNVELSYKF 141
           + VRT SGK  G++  SY+F
Sbjct: 125 YQVRTSSGKRSGSLSFSYRF 144

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BLAST of CsGy2G004340 vs. TAIR10
Match: AT3G62780.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-17
Identity = 54/144 (37.50%), Postives = 84/144 (58.33%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPR--GKSKQKTPVAKEGGSDPYW- 60
           M  R+L++N+  A GLK V   SKMDV+  V +SGDP+     +Q+T  A++GG+ P W 
Sbjct: 1   MGTRSLEINVTSAKGLKKV---SKMDVFVAVKLSGDPKCSDHREQRTQAARDGGTSPKWS 60

Query: 61  NYTMKFTIDEAALQSNRLNLKIKFVSDRSLG-DKKIGKVIVPIKRLLDESVNKGDEGKSE 120
           N  MKF +D+   ++NRL +  K   ++  G DK IG+V V +K LLD   + G++   +
Sbjct: 61  NDVMKFILDQNLAEANRLVITFKIKCEQRGGVDKDIGEVHVQVKELLD---HLGNDKTGQ 120

Query: 121 RTVNFSVRTMSGKEKGNVELSYKF 141
           R V + +    GK K ++  +Y F
Sbjct: 121 RYVTYQI----GKSKADISFTYSF 134

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BLAST of CsGy2G004340 vs. TAIR10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 81.6 bits (200), Expect = 8.3e-16
Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 6   LDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYTMKFTI 65
           L++ IK A  +++VN FS MDVYA V+I  D + K++  TPVA    ++P WN  MKF+I
Sbjct: 232 LELVIKFAKNIEDVNAFSSMDVYASVAILKDRKVKNRINTPVAFAAYTNPKWNQMMKFSI 291

Query: 66  DEAALQSNRLNLKIKFVSDRS-LGDKKIGKVIVPIKRLLDES-----VNKGDEGKSERTV 125
           DE + Q  RL L ++ +S R  LGDK+IG V +P+++LL  +      + GD       +
Sbjct: 292 DEKSAQEGRLMLLVELMSHRPFLGDKEIGFVRLPMQQLLVSNPPYPLTDNGD----ANGM 351

Query: 126 NFSVRTMSGK--EKGNVELSYKF-GEKYTVQAXXXXXXXMKSGEPMTAY----PQGYA 171
                 ++G   +KG V  +Y+F  E+ T  +          G+P   Y    PQ YA
Sbjct: 352 KLETHALTGPYGKKGVVSFTYRFLAEQVTAPS--------TPGQPYIMYVPVSPQPYA 397

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BLAST of CsGy2G004340 vs. Swiss-Prot
Match: sp|O04133|SRC2_SOYBN (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.7e-38
Identity = 92/186 (49.46%), Postives = 117/186 (62.90%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           ME RTL++NI  A  +KNVNLFSKMDVYA VS+SGDP       T V K+ GS+P WNY 
Sbjct: 3   MEYRTLELNIISAKDIKNVNLFSKMDVYAAVSLSGDPLHPQGATTHVHKDAGSNPTWNYP 62

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           +KF+++E+  + NRL+L+IK +SDR+LGD  IG V VP++ LLD   N GD+  S R V+
Sbjct: 63  VKFSVNESLAKENRLSLEIKLISDRTLGDTVIGTVHVPLRELLD---NPGDD-SSFRQVS 122

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180
           + V   S K KG++  SYKFGE     A           EP+ AYP   AGSSS  P G 
Sbjct: 123 YQVMKQSRKSKGSLNFSYKFGEHVPAPAAKTPKAAKAGQEPVMAYPPAGAGSSS-MPYGT 182

Query: 181 AYPPAP 187
            +PP P
Sbjct: 183 PHPPPP 183

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BLAST of CsGy2G004340 vs. Swiss-Prot
Match: sp|O04023|SRC2_ARATH (Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.3e-36
Identity = 92/197 (46.70%), Postives = 125/197 (63.45%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECR+LD+ I  A  LK+V L  K D+YAVVSI+GD R  +KQKT V K+ G+ P W + 
Sbjct: 1   MECRSLDLTIISAEDLKDVQLIGKQDLYAVVSINGDAR--TKQKTKVDKDCGTKPKWKHQ 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSL-GDKKIGKVIVPIKRLLDESVNKGDEGKSERTV 120
           MK T+D+AA + NRL L  + V+DR + GDK +G+V VP+K LLD+  NKGDE   E+TV
Sbjct: 61  MKLTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQ--NKGDE---EKTV 120

Query: 121 NFSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSG-------EPMTAYPQGYAGS 180
            ++VR  +GK KG+++ S+KFGEKYT  +       + S        +P+TAYP G+ G+
Sbjct: 121 TYAVRLPNGKAKGSLKFSFKFGEKYTYGSSSGPHAPVPSAMDHKTMDQPVTAYPPGH-GA 180

Query: 181 SSGYP-----AGGAYPP 185
            S YP         YPP
Sbjct: 181 PSAYPXXXXXXXSGYPP 189

[Close]

BLAST of CsGy2G004340 vs. TrEMBL
Match: tr|A0A0A0LGE9|A0A0A0LGE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030090 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-105
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT
Sbjct: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDES NKGDEGKSERTVN
Sbjct: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESANKGDEGKSERTVN 120

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180
           FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG
Sbjct: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180

Query: 181 AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF 240
           AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF
Sbjct: 181 AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF 240

Query: 241 GGM 244
           GGM
Sbjct: 241 GGM 243

[Close]

BLAST of CsGy2G004340 vs. TrEMBL
Match: tr|A0A1S3BYF1|A0A1S3BYF1_CUCME (protein SRC2-like OS=Cucumis melo OX=3656 GN=LOC103494749 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 4.6e-93
Identity = 226/243 (93.00%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPYWNYT 60
           MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDP+WNY 
Sbjct: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSKQKTPVAKEGGSDPHWNYP 60

Query: 61  MKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVN 120
           MKFT+DEAALQ+NRLNLKIKFVSDRS GDKKIGKVIVPIKRLLDES  KGDEGKSERTVN
Sbjct: 61  MKFTVDEAALQNNRLNLKIKFVSDRSFGDKKIGKVIVPIKRLLDESA-KGDEGKSERTVN 120

Query: 121 FSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAGG 180
           FSVRTMSGKEKGNVE SYKFGEKYTVQAXXXXXXXMKSGEP+TAYPQGY GSSSGYPAGG
Sbjct: 121 FSVRTMSGKEKGNVEFSYKFGEKYTVQAXXXXXXXMKSGEPVTAYPQGYPGSSSGYPAGG 180

Query: 181 AYPPAPGTXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKSGGGF 240
           AY      XXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKS GGF
Sbjct: 181 AYXXXXXXXXXXXXXXXXXXXXXXXXXGYAYGXXXXXXXXXXXXXPVHQAQRPHKS-GGF 240

Query: 241 GGM 244
           GGM
Sbjct: 241 GGM 241

[Close]

BLAST of CsGy2G004340 vs. TrEMBL
Match: tr|M5WC75|M5WC75_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322500 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-45
Identity = 101/179 (56.42%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSK-QKTPVAKEGGSDPYW-N 60
           MECR L++ I  A+ LK+VN+FSKMDVYA VS+SGDPR K +  KTPVAK+GG++P W N
Sbjct: 1   MECRPLEITIVSASDLKDVNMFSKMDVYAAVSVSGDPRNKKQTTKTPVAKDGGTNPKWNN 60

Query: 61  YTMKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERT 120
           Y++KFT+D+AAL  NRL L IK VS+RSLGD KIGKV +P+K L D      D+ K  + 
Sbjct: 61  YSIKFTLDDAALLHNRLTLNIKLVSERSLGDTKIGKVQIPLKELFDSLGGGDDQKKQIKH 120

Query: 121 VNFSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYP 178
           V +SVRT SGK KG++   YKFG+K+TV          K+ EP+ AYP G+ GSSSGYP
Sbjct: 121 VGYSVRTSSGKPKGSINFGYKFGDKFTVPV---PEAHKKTHEPVMAYPSGHPGSSSGYP 176

[Close]

BLAST of CsGy2G004340 vs. TrEMBL
Match: tr|A0A251NYP7|A0A251NYP7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322500 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.3e-43
Identity = 98/176 (55.68%), Postives = 125/176 (71.02%), Query Frame = 0


Query: 4   RTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPRGKSK-QKTPVAKEGGSDPYW-NYTM 63
           R L++ I  A+ LK+VN+FSKMDVYA VS+SGDPR K +  KTPVAK+GG++P W NY++
Sbjct: 21  RPLEITIVSASDLKDVNMFSKMDVYAAVSVSGDPRNKKQTTKTPVAKDGGTNPKWNNYSI 80

Query: 64  KFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTVNF 123
           KFT+D+AAL  NRL L IK VS+RSLGD KIGKV +P+K L D      D+ K  + V +
Sbjct: 81  KFTLDDAALLHNRLTLNIKLVSERSLGDTKIGKVQIPLKELFDSLGGGDDQKKQIKHVGY 140

Query: 124 SVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYP 178
           SVRT SGK KG++   YKFG+K+TV          K+ EP+ AYP G+ GSSSGYP
Sbjct: 141 SVRTSSGKPKGSINFGYKFGDKFTVPV---PEAHKKTHEPVMAYPSGHPGSSSGYP 193

[Close]

BLAST of CsGy2G004340 vs. TrEMBL
Match: tr|A0A2P5E809|A0A2P5E809_9ROSA (C2 domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_225120 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.8e-42
Identity = 104/186 (55.91%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 1   MECRTLDVNIKRANGLKNVNLFSKMDVYAVVSISGDPR-GKSKQKTPVAKEGGSDPYWNY 60
           MECR LD+ I  A  LK+VNL SKMDVYAVVSISGD R  K KQKTPV K+ G +P W++
Sbjct: 1   MECRPLDITIISATDLKDVNLLSKMDVYAVVSISGDHRSSKQKQKTPVDKDSGPNPRWDH 60

Query: 61  TMKFTIDEAALQSNRLNLKIKFVSDRSLGDKKIGKVIVPIKRLLDESVNKGDEGKSERTV 120
           T KFT+ E A+Q N+L LKIK VSDRS GDK+IG+V VPIK LL+   N  D+   E+ V
Sbjct: 61  TFKFTLFEDAVQQNQLVLKIKLVSDRSFGDKEIGEVQVPIKELLE---NSKDDKNGEKRV 120

Query: 121 NFSVRTMSGKEKGNVELSYKFGEKYTVQAXXXXXXXMKSGEPMTAYPQGYAGSSSGYPAG 180
           ++SVR  SGK KG +   YKFGEK+   A          GEP+ AYP G+AG S GYP  
Sbjct: 121 SYSVRLPSGKAKGTLNFGYKFGEKFAAPA---SAHKAAPGEPVMAYPPGHAGPSQGYP-- 175

Query: 181 GAYPPA 186
              PPA
Sbjct: 181 ---PPA 175

The following BLAST results are available for this feature:

BLAST of CsGy2G004340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648839.1	1.6e-105	99.59	PREDICTED: actin cytoskeleton-regulatory complex protein PAN1-like [Cucumis sati...	[more]
XP_008454313.1	6.9e-93	93.00	PREDICTED: protein SRC2-like [Cucumis melo]	[more]
XP_022946248.1	4.1e-77	84.90	protein SRC2-like [Cucurbita moschata]	[more]
XP_022999033.1	2.0e-76	84.57	protein SRC2-like [Cucurbita maxima]	[more]
XP_023545314.1	4.5e-76	84.74	protein SRC2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G004340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09070.1	2.9e-37	46.70	soybean gene regulated by cold-2	[more]
AT3G16510.1	6.1e-27	45.00	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G15755.1	2.4e-23	40.00	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G62780.1	2.6e-17	37.50	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G15740.1	8.3e-16	35.39	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]

BLAST of CsGy2G004340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04133\|SRC2_SOYBN	9.7e-38	49.46	Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1	[more]
sp\|O04023\|SRC2_ARATH	5.3e-36	46.70	Protein SRC2 homolog OS=Arabidopsis thaliana OX=3702 GN=SRC2 PE=1 SV=1	[more]

BLAST of CsGy2G004340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGE9\|A0A0A0LGE9_CUCSA	1.1e-105	99.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030090 PE=4 SV=1	[more]
tr\|A0A1S3BYF1\|A0A1S3BYF1_CUCME	4.6e-93	93.00	protein SRC2-like OS=Cucumis melo OX=3656 GN=LOC103494749 PE=4 SV=1	[more]
tr\|M5WC75\|M5WC75_PRUPE	2.1e-45	56.42	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322500 PE=4 SV=1	[more]
tr\|A0A251NYP7\|A0A251NYP7_PRUPE	4.3e-43	55.68	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G322500 PE=4 SV=1	[more]
tr\|A0A2P5E809\|A0A2P5E809_9ROSA	2.8e-42	55.91	C2 domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_225120 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR035892	C2_domain_sf
IPR000008	C2_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G004340.1	CsGy2G004340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 5..111 e-value: 3.6E-11 score: 53.1
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 5..108 e-value: 1.4E-15 score: 57.3
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..96 score: 10.501
IPR035892	C2 domain superfamily	GENE3D	G3DSA:2.60.40.150		coord: 2..150 e-value: 4.5E-18 score: 67.7
None	No IPR available	PANTHER	PTHR32246:SF18	C2 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..283
None	No IPR available	PANTHER	PTHR32246	FAMILY NOT NAMED	coord: 1..283
None	No IPR available	CDD	cd04051	C2_SRC2_like	coord: 5..132 e-value: 4.6259E-43 score: 144.296
None	No IPR available	SUPERFAMILY	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 3..143

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G004340	Cla019918	Watermelon (97103) v1	cgybwmB140
CsGy2G004340	Csa2G030090	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G004340	MELO3C004229	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G004340	ClCG02G015510	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G004340	CSPI02G04220	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G004340	CmaCh12G010640	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G004340	CmaCh05G011200	Cucurbita maxima (Rimu)	cgybcmaB253
CsGy2G004340	CmaCh08G012220	Cucurbita maxima (Rimu)	cgybcmaB270
CsGy2G004340	CmoCh12G010780	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G004340	CmoCh05G011340	Cucurbita moschata (Rifu)	cgybcmoB242
CsGy2G004340	CmoCh08G011950	Cucurbita moschata (Rifu)	cgybcmoB255
CsGy2G004340	Lsi11G005810	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G004340	Cp4.1LG07g09010	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G004340	Cp4.1LG17g00890	Cucurbita pepo (Zucchini)	cgybcpeB202
CsGy2G004340	Cp4.1LG11g09090	Cucurbita pepo (Zucchini)	cgybcpeB166
CsGy2G004340	MELO3C015314.2	Melon (DHL92) v3.6.1	cgybmedB095
CsGy2G004340	MELO3C004229.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G004340	CsaV3_2G006560	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G004340	CsaV3_1G038880	Cucumber (Chinese Long) v3	cgybcucB062
CsGy2G004340	Bhi06G001283	Wax gourd	cgybwgoB124
CsGy2G004340	Carg26763	Silver-seed gourd	carcgybB0737
CsGy2G004340	Carg17534	Silver-seed gourd	carcgybB0713

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy2G004340	CsGy1G025800	Cucumber (Gy14) v2	cgybcgybB012

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G004340	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G004340	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G004340	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G004340	Watermelon (97103) v2	cgybwmbB114