CmaCh12G010520 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G010520
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Description60S ribosomal protein L18-3
LocationCma_Chr12 : 8322164 .. 8325805 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTCGTCTTCGATAAATAGGGTTTTCGAAAGCCCTAAAAACCATTGTCGTTCACTCGTAGCAGTCGCCGTCGCGGAGCGGAAGGGTTTCTCCACCAAGAGCATCAATGGTCTGTTTCTTTCTCTTCCTCAATTCTTTACTATTTCTCCAATGGCGTAGATCAATGTCTGAGATTTGTGTTCCGTTAATTGCAGGGGATCGATCTCGTAGCAGGAGGCAAGAGTAAGAAGACCAAGAGGACTGCGCCTAAGTCCGACGATATCTACCTCAAGCTCCTCGTGAAGGTTGGTTTTCTTATTTTTTATTTTTGCTAATCATCGCTGGTTCCGCTGTCGTGACGAGCATTTGCTTTCACAGATTAAAATTCTTTGAGAATTGTGATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAACTAATGAATAAGTATGTTGTGATTAAACTTTAAGTTTTTGTTGAATGTGGAGTGGAATTTTAAATCTTGTTCTGCAAGAATTATCTTGAATTTTATACATCGTTATTTTCACGTTTTTTTCGCTCGTATTATCTTGAATTATCTTGAATTTTTTTTTTCTAACTCAATGGTGCTTGAAATCTGACTGTTTGTTAAGAAAGTAGGTGAAGTTTATGTGCAGTGATGATATCTGTGTATCCCAGCTCATTATGAGACCTTTTGTAGGTCCGGGAATGAACCTGTTTCCACATTTATCTGAGCCTAGGCTCAGAGTTAAACTTTCTGACTCAATTTGAACAACGAAGCAGAATAATTGGCCACCAATAAATCTAGAATTCGAATTTTTAGATACGAAATATTATATCTTCATCGATTGGCCAATGTTTTTAACTTTTCTTGAACTATATTTTGATTGAAATGCTGATTGTGTTATCAGCCGCAATGACGCAATATGTTAATCCCAGCTCTATGAGACTTTCTACAGGTCAAGGACTAGACAAGGTCCACATAATTACCTGAGCTCAAAATATTATTTTTTAATCGATGGGCCAATATTTATAACTTTTCTTAACTATATTTTGATTGAAATGCTTATTGTATTATCAGCAGCAATGATGCAATGTGATAATCCCAGCTCTATGAGACTTTCTAAAGGTCAAGGACTAGACAAGATCCACATATTTACCTGAGCTCAAAGTATTATTTTTAAATCTATGGGCCAATATTTTTAACTTTTCTTAAAACTATATTTTGATTGAAATTCTTATTGTATTATCAGCCGCAATGATGCAATGTGATAATCCCAGCTCTATGAGACTTTCTAAAGGTCAAGGACTAGACAAGATCAACATATTTACCTGAGCTCAAAATATTATTTTTAAATTGATGCCCAATATTTTTAACTTTTCTTTAATTATATTTTGATTGATAATGCTTAATTGTATTATCAACCGCAATGATGCAATGTGATAATCCCAGCTCTATGAGACTTTCTAAAGGTCAAGGACTAGACATGATCCACATATTTACCTGAGCTCAAAATATTATTTTTAAATCGATGGGCCAATATTTTTAACTTTTATTTTATTATATTTTATTGAAATGCTGATTTTATTATTAGCCGCTATGATGCAATATGATAATCCCAGCTCTATGAGACATTCTACAGGTCAAGGACTAGACAAGATCCACATATTTACCTGAGCTCAAAATATTTTACCCTTGAAATTCATTCATTTGTATCAAATTCAGCAGTAAAATTAGGATGACATATATGGGCTACCTTCATCATGAATTAATAACGAAGCCTGTCGGCATATCCTTCTGCCATTTCAGTCACTGGCTTCCTTTTCTCTGTATTTTTGAAAGGATTTTTGCACCGTTTGATTTTGAATAAATACATTATTCCCTTAAATTGTTGAATGATTGAGAGATAGGTTGTTCCCTGTGATGCTTTACTTTTTAAACCATGCTAATACTGATCACATGATGATTGATCTTCAACTCTTGTCTCTGAGGGAACTAGCCTACACTGTTGAATTAATTATTTCTGAAGGACCTTTGTTCGTTTGAATATCTAATATTGTATCCATATGAATTTATAATCTTATTCTGTGAGCATTATCTTTAACTTTAGCCATTGTAACTTAATGTGCAGTGATGATATTTGTGTATCCCAGCTCATTATGAGGCCTTCCGTAGGTCCGGGAATGAACCTGTTTCCACATTTATCTGAGCTTATTCAATTTAAACTTTCTTATTCAATTTGAACAACGAAGTGGAATAATTGGCCCATATTTTTAACTCTTAAATTATATTTTAATTGAAATGCTGTTGTTTTATCAGCCGCAATGATGAATTATGTTAATCCCAGCTCTATGAGACATTCTAAATGTCAATGACTAGACAAGATTCACATATTTACCTGAGCTCAAACTATTATACGCTTGAAGTTTTTTGCATTTCAAGATTATTTTCGATAATAATTCATTTTTATGGACACTTATCCTGTAGGTTTATTGCAAGCTGTTTATTGTTCATTATGCTTATTCGGGTCATTTAAGTGATGGGTTCTTTTAATTTTGTTTACTGAATTCAGCTGTACCGATTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTTAAGCGGTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCAGACTTATCAAGTTCATGAAGGGAAAGGTGTGTGCTTCTATGTATGCATTACTTGTTCTTAACCATTTTATCCACATTGTTCGGTGTCTAACTTCACGTGGTTATAACATTGTACAGGAAGATAAAATTGCCGTCATTGTCGGAACCGTGACCGACGACATTCGTGTTTATGAAGTTCCAGCTTTGAAGGTTACAGCCTTGAGGTTTACCGAGACTGCAAGGGCAAGGATTGAGAAGGCTGGTGGCGAGTGCTTGACCTTTGACCAGCTTGCCCTGAGAGCTCCTCTAGGCCAGAATACGGTACGATAGCGACTGTGTCCTGAATTTCATATTGACTTGTCGTTGAGCTCCCTATATTAACAATTGTTAGATTCAAACTTAATCTGCTGTAATTTTGCACCCAAAGGTTCTCCTTCGTGGACCAAAGAACTCCCGAGAAGCCGTGAAGCACTTTGGTCCTGCTCCTGGTGTACCTCACAGCCACACGAAACCATACGTGAGGTCGAAGGGAAGGAAGTTCGAGAGAGCTAGAGGAAAGAGGAACAGCAGGGGTTACAGAGTTTAGTTTCAGTCCCATGTTCAGCGCTATTTGTGAGACAGAAAATTCACGTTTTGGTCAACTTGAAGATACATTGTCATGTGAGATTCACTCATTTCTTTGTTCAAGTTTTCGCTATTACAACATCACAATCGTATTCAATGAGAAACATCTTGTATTTTCTTTCCTCCCACTTTTCCATCCTTATTTGCTTCATATTTTATAAGTGTCCATATTATTCTATGAACAAATTAGCCTTTAGTAAGTTATTGGTATATCTATATATTTTACAAATTATTTTGTAT

mRNA sequence

ATGCCCTCGTCTTCGATAAATAGGGTTTTCGAAAGCCCTAAAAACCATTGTCGTTCACTCGTAGCAGTCGCCGTCGCGGAGCGGAAGGGTTTCTCCACCAAGAGCATCAATGGGGATCGATCTCGTAGCAGGAGGCAAGAGTAAGAAGACCAAGAGGACTGCGCCTAAGTCCGACGATATCTACCTCAAGCTCCTCGTGAAGCTGTACCGATTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTTAAGCGGTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCAGACTTATCAAGTTCATGAAGGGAAAGGAAGATAAAATTGCCGTCATTGTCGGAACCGTGACCGACGACATTCGTGTTTATGAAGTTCCAGCTTTGAAGGTTACAGCCTTGAGGTTTACCGAGACTGCAAGGGCAAGGATTGAGAAGGCTGGTGGCGAGTGCTTGACCTTTGACCAGCTTGCCCTGAGAGCTCCTCTAGGCCAGAATACGGTTCTCCTTCGTGGACCAAAGAACTCCCGAGAAGCCGTGAAGCACTTTGGTCCTGCTCCTGGTGTACCTCACAGCCACACGAAACCATACGTGAGGTCGAAGGGAAGGAAGTTCGAGAGAGCTAGAGGAAAGAGGAACAGCAGGGGTTACAGAGTTTAGTTTCAGTCCCATGTTCAGCGCTATTTGTGAGACAGAAAATTCACGTTTTGGTCAACTTGAAGATACATTGTCATGTGAGATTCACTCATTTCTTTGTTCAAGTTTTCGCTATTACAACATCACAATCGTATTCAATGAGAAACATCTTGTATTTTCTTTCCTCCCACTTTTCCATCCTTATTTGCTTCATATTTTATAAGTGTCCATATTATTCTATGAACAAATTAGCCTTTAGTAAGTTATTGGTATATCTATATATTTTACAAATTATTTTGTAT

Coding sequence (CDS)

ATGGGGATCGATCTCGTAGCAGGAGGCAAGAGTAAGAAGACCAAGAGGACTGCGCCTAAGTCCGACGATATCTACCTCAAGCTCCTCGTGAAGCTGTACCGATTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTTAAGCGGTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCAGACTTATCAAGTTCATGAAGGGAAAGGAAGATAAAATTGCCGTCATTGTCGGAACCGTGACCGACGACATTCGTGTTTATGAAGTTCCAGCTTTGAAGGTTACAGCCTTGAGGTTTACCGAGACTGCAAGGGCAAGGATTGAGAAGGCTGGTGGCGAGTGCTTGACCTTTGACCAGCTTGCCCTGAGAGCTCCTCTAGGCCAGAATACGGTTCTCCTTCGTGGACCAAAGAACTCCCGAGAAGCCGTGAAGCACTTTGGTCCTGCTCCTGGTGTACCTCACAGCCACACGAAACCATACGTGAGGTCGAAGGGAAGGAAGTTCGAGAGAGCTAGAGGAAAGAGGAACAGCAGGGGTTACAGAGTTTAG

Protein sequence

MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV
Homology
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BLAST of CmaCh12G010520 vs. Swiss-Prot
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.4e-90
Identity = 164/187 (87.70%), Postives = 181/187 (96.79%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GK+DKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of CmaCh12G010520 vs. Swiss-Prot
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2)

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-89
Identity = 163/187 (87.17%), Postives = 179/187 (95.72%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GKEDKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of CmaCh12G010520 vs. Swiss-Prot
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 7.5e-84
Identity = 157/184 (85.33%), Postives = 174/184 (94.57%), Query Frame = 1 

Query: 4   DLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPIS 63
           DL AGGK+KKTKRT+PKS+DIYLKLLVKLYRFLVRRT SNFNAVILKRLFMSKVN+PP+S
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 64  LSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFD 123
           LSRLIK+M+GKE KI V+VG VTDDIRVY+VP +KVTAL+FTETARARI+KAGGECLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 124 QLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSR 183
           QLALR PL  +TVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFE+ARG+R SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

Query: 184 GYRV 188
           G+RV
Sbjct: 181 GFRV 183

[Close]
BLAST of CmaCh12G010520 vs. Swiss-Prot
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3)

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-78
Identity = 149/188 (79.26%), Postives = 167/188 (88.83%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRT PKSDD+YLKLLVK  R+LVRRT S FNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL+++M GK+ KIAVIVGTVTDD+R+ +VPAL VTALRFTE+ARARI KAGGECL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 121 TFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGK 180
           TFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVR  G+K E ARG+
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 181 RNSRGYRV 188
           R SRG++V
Sbjct: 181 RRSRGFKV 188

[Close]
BLAST of CmaCh12G010520 vs. Swiss-Prot
Match: RL18_IXOSC (60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.6e-65
Identity = 126/188 (67.02%), Postives = 158/188 (84.04%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGID +     +K  R  PKS+++YL LLVK+YRFL RR+G+ FN ++LKRLFMS++NKP
Sbjct: 1   MGID-INHKYDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKP 60

Query: 61  PISLSRLIKFMK--GKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGE 120
            ISL+R+ +FMK  G+E+ IAV+VGTVTDD+R+Y+VP L++ ALR TE ARARI KAGGE
Sbjct: 61  VISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGE 120

Query: 121 CLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG 180
            LTFDQLA++AP G+ TVL++GP+NSREA +HFGPAPGVPHSHTKPYVRSKGRKFERARG
Sbjct: 121 ILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFERARG 180

Query: 181 KRNSRGYR 187
           +R SR Y+
Sbjct: 181 RRKSRRYK 187

[Close]
BLAST of CmaCh12G010520 vs. TrEMBL
Match: A0A0A0LFX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032220 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.7e-95
Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIK+M GKE +IAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKYMNGKEGRIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of CmaCh12G010520 vs. TrEMBL
Match: W9QQ74_9ROSA (60S ribosomal protein L18-3 OS=Morus notabilis GN=L484_011109 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 8.7e-95
Identity = 178/186 (95.70%), Postives = 186/186 (100.00%), Query Frame = 1 

Query: 2   GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPP 61
           GIDLVAGGKSKK+KRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVNKPP
Sbjct: 12  GIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPP 71

Query: 62  ISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLT 121
           +SLSRLI+FMKGKEDK+AV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLT
Sbjct: 72  LSLSRLIRFMKGKEDKVAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLT 131

Query: 122 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRN 181
           FDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRN
Sbjct: 132 FDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRN 191

Query: 182 SRGYRV 188
           SRG+RV
Sbjct: 192 SRGFRV 197

[Close]
BLAST of CmaCh12G010520 vs. TrEMBL
Match: A0A0D2TP40_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G301700 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.5e-94
Identity = 179/187 (95.72%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRLI+FMKGKEDKIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIEFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRK+ERARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKYERARGRR 180

Query: 181 NSRGYRV 188
           NS+G+RV
Sbjct: 181 NSKGFRV 187

[Close]
BLAST of CmaCh12G010520 vs. TrEMBL
Match: A0A061F4C5_THECC (Ribosomal protein L18 OS=Theobroma cacao GN=TCM_026682 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.3e-94
Identity = 178/187 (95.19%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKK+KRTAPKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRLI+FMKGKEDKIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIEFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 181 NSRGYRV 188
           NS+G+RV
Sbjct: 181 NSKGFRV 187

[Close]
BLAST of CmaCh12G010520 vs. TrEMBL
Match: A0A0D2P954_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G091200 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.6e-94
Identity = 177/187 (94.65%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKL+VKLYRFLVRRTGS FNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRLI+FMKGKEDKIAV+VGTVTDDIRVYEVPALKVTALRFTETARARI+KAGGECL
Sbjct: 61  PLSLSRLIEFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIDKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 181 NSRGYRV 188
           NS+G+RV
Sbjct: 181 NSKGFRV 187

[Close]
BLAST of CmaCh12G010520 vs. TAIR10
Match: AT5G27850.1 (AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 331.6 bits (849), Expect = 3.0e-91
Identity = 164/187 (87.70%), Postives = 181/187 (96.79%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GK+DKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of CmaCh12G010520 vs. TAIR10
Match: AT3G05590.1 (AT3G05590.1 ribosomal protein L18)

HSP 1 Score: 330.5 bits (846), Expect = 6.8e-91
Identity = 163/187 (87.17%), Postives = 179/187 (95.72%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRL++FM GKEDKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]
BLAST of CmaCh12G010520 vs. TAIR10
Match: AT2G47570.1 (AT2G47570.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 208.0 bits (528), Expect = 5.1e-54
Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 1 

Query: 54  MSKVNKPPISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIE 113
           MSKVNK P+SLSRL+++M GK+ KIAVIVGTVTDD+R+ +VPAL VTALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGYRV 188
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

[Close]
BLAST of CmaCh12G010520 vs. NCBI nr
Match: gi|659070222|ref|XP_008454015.1| (PREDICTED: 60S ribosomal protein L18-3 [Cucumis melo])

HSP 1 Score: 359.0 bits (920), Expect = 5.0e-96
Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIK+MKGKE KIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of CmaCh12G010520 vs. NCBI nr
Match: gi|449454059|ref|XP_004144773.1| (PREDICTED: 60S ribosomal protein L18-3 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 2.5e-95
Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           PISLSRLIK+M GKE +IAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKYMNGKEGRIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]
BLAST of CmaCh12G010520 vs. NCBI nr
Match: gi|703068658|ref|XP_010088293.1| (60S ribosomal protein L18-3 [Morus notabilis])

HSP 1 Score: 354.4 bits (908), Expect = 1.2e-94
Identity = 178/186 (95.70%), Postives = 186/186 (100.00%), Query Frame = 1 

Query: 2   GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPP 61
           GIDLVAGGKSKK+KRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVNKPP
Sbjct: 12  GIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPP 71

Query: 62  ISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLT 121
           +SLSRLI+FMKGKEDK+AV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLT
Sbjct: 72  LSLSRLIRFMKGKEDKVAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLT 131

Query: 122 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRN 181
           FDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRN
Sbjct: 132 FDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRN 191

Query: 182 SRGYRV 188
           SRG+RV
Sbjct: 192 SRGFRV 197

[Close]
BLAST of CmaCh12G010520 vs. NCBI nr
Match: gi|823197185|ref|XP_012434195.1| (PREDICTED: 60S ribosomal protein L18-2 [Gossypium raimondii])

HSP 1 Score: 353.6 bits (906), Expect = 2.1e-94
Identity = 179/187 (95.72%), Postives = 186/187 (99.47%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRLI+FMKGKEDKIAV+VGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIEFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRK+ERARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKYERARGRR 180

Query: 181 NSRGYRV 188
           NS+G+RV
Sbjct: 181 NSKGFRV 187

[Close]
BLAST of CmaCh12G010520 vs. NCBI nr
Match: gi|659099453|ref|XP_008450608.1| (PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 3.6e-94
Identity = 179/187 (95.72%), Postives = 184/187 (98.40%), Query Frame = 1 

Query: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PISLSRLIKFMKGKEDKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120
           P+SLSRLI+FMKGKE KIAV+VGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

The following BLAST results are available for this feature:
BLAST of CmaCh12G010520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL183_ARATH5.4e-9087.7060S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1[more]
RL182_ARATH1.2e-8987.1760S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2[more]
RL18_CICAR7.5e-8485.3360S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1[more]
RL181_ARATH2.1e-7879.26Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3[more]
RL18_IXOSC4.6e-6567.0260S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1[more]
BLAST of CmaCh12G010520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFX7_CUCSA1.7e-9597.86Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032220 PE=4 SV=1[more]
W9QQ74_9ROSA8.7e-9595.7060S ribosomal protein L18-3 OS=Morus notabilis GN=L484_011109 PE=4 SV=1[more]
A0A0D2TP40_GOSRA1.5e-9495.72Uncharacterized protein OS=Gossypium raimondii GN=B456_007G301700 PE=4 SV=1[more]
A0A061F4C5_THECC4.3e-9495.19Ribosomal protein L18 OS=Theobroma cacao GN=TCM_026682 PE=4 SV=1[more]
A0A0D2P954_GOSRA5.6e-9494.65Uncharacterized protein OS=Gossypium raimondii GN=B456_004G091200 PE=4 SV=1[more]
BLAST of CmaCh12G010520 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G27850.13.0e-9187.70 Ribosomal protein L18e/L15 superfamily protein[more]
AT3G05590.16.8e-9187.17 ribosomal protein L18[more]
AT2G47570.15.1e-5477.04 Ribosomal protein L18e/L15 superfamily protein[more]
BLAST of CmaCh12G010520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070222|ref|XP_008454015.1|5.0e-9698.40PREDICTED: 60S ribosomal protein L18-3 [Cucumis melo][more]
gi|449454059|ref|XP_004144773.1|2.5e-9597.86PREDICTED: 60S ribosomal protein L18-3 [Cucumis sativus][more]
gi|703068658|ref|XP_010088293.1|1.2e-9495.7060S ribosomal protein L18-3 [Morus notabilis][more]
gi|823197185|ref|XP_012434195.1|2.1e-9495.72PREDICTED: 60S ribosomal protein L18-2 [Gossypium raimondii][more]
gi|659099453|ref|XP_008450608.1|3.6e-9495.72PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000039Ribosomal_L18e
IPR021131Ribosomal_L18e/L15P
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G010520.1CmaCh12G010520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000039Ribosomal protein L18ePANTHERPTHR1093460S RIBOSOMAL PROTEIN L18coord: 2..187
score: 1.8E
IPR021131Ribosomal protein L18e/L15PPFAMPF17135Ribosomal_L18coord: 2..187
score: 1.5
IPR021131Ribosomal protein L18e/L15PunknownSSF52080Ribosomal proteins L15p and L18ecoord: 20..139
score: 4.97
NoneNo IPR availableGENE3DG3DSA:3.100.10.10coord: 21..139
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G010520Cucsa.090970Cucumber (Gy14) v1cgycmaB0179
CmaCh12G010520Cucsa.181760Cucumber (Gy14) v1cgycmaB0520
CmaCh12G010520Cla019940Watermelon (97103) v1cmawmB170
CmaCh12G010520Cla005209Watermelon (97103) v1cmawmB158
CmaCh12G010520Csa1G569250Cucumber (Chinese Long) v2cmacuB159
CmaCh12G010520Csa2G032220Cucumber (Chinese Long) v2cmacuB173
CmaCh12G010520MELO3C015293Melon (DHL92) v3.5.1cmameB151
CmaCh12G010520MELO3C004215Melon (DHL92) v3.5.1cmameB172
CmaCh12G010520ClCG02G015260Watermelon (Charleston Gray)cmawcgB156
CmaCh12G010520ClCG03G017220Watermelon (Charleston Gray)cmawcgB159
CmaCh12G010520CSPI01G26310Wild cucumber (PI 183967)cmacpiB160
CmaCh12G010520CSPI02G04390Wild cucumber (PI 183967)cmacpiB174
CmaCh12G010520CmoCh12G010620Cucurbita moschata (Rifu)cmacmoB177
CmaCh12G010520CmoCh05G011120Cucurbita moschata (Rifu)cmacmoB190
CmaCh12G010520Lsi06G000940Bottle gourd (USVL1VR-Ls)cmalsiB178
CmaCh12G010520Lsi11G006050Bottle gourd (USVL1VR-Ls)cmalsiB159
CmaCh12G010520Cp4.1LG11g09040Cucurbita pepo (Zucchini)cmacpeB171
CmaCh12G010520Cp4.1LG07g08880Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G010520MELO3C015293.2Melon (DHL92) v3.6.1cmamedB166
CmaCh12G010520MELO3C004215.2Melon (DHL92) v3.6.1cmamedB187
CmaCh12G010520CsaV3_2G006750Cucumber (Chinese Long) v3cmacucB0202
CmaCh12G010520CsaV3_1G038670Cucumber (Chinese Long) v3cmacucB0184
CmaCh12G010520Cla97C02G041040Watermelon (97103) v2cmawmbB175
CmaCh12G010520Bhi06G001296Wax gourdcmawgoB0182
CmaCh12G010520CsGy2G004530Cucumber (Gy14) v2cgybcmaB178
CmaCh12G010520CsGy1G025570Cucumber (Gy14) v2cgybcmaB054
CmaCh12G010520Carg23284Silver-seed gourdcarcmaB1221
CmaCh12G010520Carg12025Silver-seed gourdcarcmaB0784
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G010520CmaCh05G010970Cucurbita maxima (Rimu)cmacmaB190
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G010520Watermelon (97103) v2cmawmbB180