Cucsa.181760 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.181760
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	60S ribosomal protein L18
Location	scaffold01251 : 36147 .. 40078 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTTTTGTATCTGACTTCTTCCGGTGATTAGGGGATCGATCTCGTAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGGTTGCACCTAAATCTGATGATATCTACCTAAAGTTACTCGTCAAGGTACTTGTTAACCGAGATTTCTCCTTCATTTTTTGCTTTGTTTGAAATTAAATGTGCTTGATTGTTCATGGGGTTTGTTCGAATGTTTTTAAGATGTTCTGTGAGTCTCCCATTGAAAACCAATTTTGAGATATCTATTGGTTGCATTATAGCATTTCTGGAGCTTACACCTTTTTGTTTTATTCTCTCTGCGTTGCGATTGTAAAATTTGTTTTAAGTTGCTTGCAGTTTATAAATGTCAATTTTTTGTTAATTTTTTTTCTCTAACTAATTGGTTTTGATGGCTGGTCTTTCTGCTTTGATGATGTTTAATAATCCCAGCTCGATGAGACCTTTTGTAGGTCGGGGAATAATCTTTACCCATTAAATATCTGAGCCTTAAGTCCAGTTTTAAAGTCATTTTTTATTGTTTCTCACTGCTGGTGTAAATGATTGATTTTACAATGAAGTACCCAATTGTTAGTCCGCTCGTTAACTGCATTTTCTCTTCTGGTCTTTCTGCTTTGATGATATTTGTATAATCCCAGCTCTATGAGACCTTTTGTAGGTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTTTTTCACTAACTAATTTGTTTTGATGGCTGGTCTTTCTGCTTTGATGATGTATGATAATCCCAGCTCGATGAGACCTTTCGTAGGTCAGGGAATAGTCTTTACCCATTAAAGTATCTGAGCCTAAAGTCCAGTTTTAGATTTTTGTTTGGATGGTTTTCCACTTCTCTCTGCATTTCTCTTGTCAAATCTGTTTTAAACCGGTAGTAGTTTGTAAATGCCTAATTTTGTTTCTTTTTTGTTAACTAATTGGTTTTGATGGCTGGTCTTTCTGCTTTGATGATGTTTGATAATCCCAGCTCGATGAGACCTTTTGTAGGTCGGGGAATAGACTTTACCCATCAAGTATCTGAGCCTAAAGTCCAGCTTTAGAGTCTTTTTTGGATTTTTTTTCACTTTTCTCTGTGTTTTGCCTGTTAAACCTTTTTAAATTGCTAACAGTTTACATTTGCGTTTTCCCCCCCTCTAACTAATTGGTTTTGATGGCTGGTCTTTCTGCTATGATAATATTTGATAACGTGGAATTATTGTAAATGACAAAACTATTGAAAATATTTATAAAATTTACCTGATTTATTGTTGTTAGACACTGATCAAAGTTTGTTAGAAGTTTGTCTATCATTGATATATTATGAAAATTTTTGCTATATTTTGTAGATAGTTCGGTTCATTATGTTATATTTGAAAATGCCCTTTGATAATTGCAGCTAGATGAGACCTTTTGTAAGTCGGGAATTGTCTTCACACTTAAAATTTCTGACCCTAAGTAAACTGCTGTGCTATCTACATTATTTCCCCTTTTTGAGTAGGGAATATAGTTTTACCTCAACAAGCATAAGCCATAGAAGGCTTTTTTTTAGTCTTCGATCACATCGAACAGAAAAAGGTTCCCAGTGATGATTGACTTGACCATGCTAATGCTGATCAATTTGTGATTATTCTTTTCTATAATTTTTCTGAGGGAACTGGCTCTAAGGTTTTAAGTTTTCGTGCTCATTGGCATGTCTTGCTCCTGAGTGTGGTTCTATTTTCAGAGAGGAGAATGATTGATTTACTCATGTATTTTTTTTTGTTTTTGCATTTTTTGAAAGTATAAATACTTGCATGAAGATTAATATATTTCTCCCCTCTGATATGAACTATTCATATGGATATGTAATTTGTCTTCAAAAACTTAAATCTTACACTTTTTAGTTTTCAGATCCAGGAGTCTTCTAATTTTTTTCATTTGTGTGCAATACGGTTATAAACTTTGTGTGTATGTAGGTTATTCTACTCATGCTGTGAATAGAAGCTTTATTTCACGTCCAATTTTTTTCAATTACACGCTGTTTCACCTGGCTTGCATTCACTAATTCAATGATTTCATGTATTTCTTACCAGCTTTACCGCTTCCTTGTCCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTTTCTCGGCTTATCCAGTTCACAAAAGGAAAGGTTGGTAAAATCATGTAGTATTCTAATTTTGTTTTCTTTTTTTTTGTATGGTTGTGTATATATGAGATATCTGGAATCTTAAACATTCGTGTGTTGTGTAATAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTCTGAGGTTCACTGAGACAGCAAGGGCAAGGATTGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTATGTATATCTTCATTTCTTTTCTGAATTTACTGGATGAATCTTTCATGGTGAAGTCATTACTTGGTTCATTTCCATTTTTAACCTGCTGCTTCACATTGGTCAAGATTGAACTCATTAAAGAGTTTCAACAATGATTTAGTAGTTATTTTAGGGGTTTGAATCATCACTCGGCTTCATTTGCAGGTTCTTCTTAGAGGTCCTAAGAATTCCCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTACCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGATTTGATCTTTTACTTTTTTCCGATCCTAATTCGATGCAAGTGTGTTATTTTGAAATTCAATATCCAAATTTTGCTAGATTTTAGTTGCATGTCAGTTATTCCATTTCTTACGGTTTTTGGCATAATATTGTTGATTATGAATTTGATTAAATGTTATTCAGCAGGACTTCATAGAGTTTCTTTCCTAGATTTTTGTGATTACCATTTTCTGTTCTATTCATTTGAGTATCTAAAAAATGAAACAAGTAGGTTGTAAAATTGTCCTAAACTAGAGTAGTGCTTTGCTCGATGTTCTATCTATATGTAGAGGTCTTGTTCACTATTAAATGCTAATACTTATTTATTTG

mRNA sequence

TTTGTTTTTGTATCTGACTTCTTCCGGTGATTAGGGGATCGATCTCGTAGCAGGAGGTAAGAGTAAGAAGACCAAGAGGGTTGCACCTAAATCTGATGATATCTACCTAAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTCCGTCGAACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGCTTGTTTATGAGCAAGGTTAACAAGCCTCCACTTTCCCTTTCTCGGCTTATCCAGTTCACAAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTCTGAGGTTCACTGAGACAGCAAGGGCAAGGATTGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAATTCCCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTACCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGATTTGATCTTTTACTTTTTTCCGATCCTAATTCGATGCAAGTGTGTTATTTTGAAATTCAATATCCAAATTTTGCTAGATTTTAGTTGCATGTCAGTTATTCCATTTCTTACGGTTTTTGGCATAATATTGTTGATTATGAATTTGATTAAATGTTATTCAGCAGGACTTCATAGAGTTTCTTTCCTAGATTTTTGTGATTACCATTTTCTGTTCTATTCATTTGAGTATCTAAAAAATGAAACAAGTAGGTTGTAAAATTGTCCTAAACTAGAGTAGTGCTTTGCTCGATGTTCTATCTATATGTAGAGGTCTTGTTCACTATTAAATGCTAATACTTATTTATTTG

Coding sequence (CDS)

ATGAGCAAGGTTAACAAGCCTCCACTTTCCCTTTCTCGGCTTATCCAGTTCACAAAAGGAAAGGAAAGTAAGATTGCTGTCGTTGTTGGGACTATTACCGATGATATTCGAGTCTATGAAGTTCCAGCATTGAAAGTTGCAGCTCTGAGGTTCACTGAGACAGCAAGGGCAAGGATTGAAAAGGCTGGTGGGGAATGTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAATTCCCGAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTACCACACAGCCATTCCAAGCCATATGTGAGGTCGAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATAGGGTTTGA

Protein sequence

MSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRV*

Homology

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BLAST of Cucsa.181760 vs. Swiss-Prot
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2)

HSP 1 Score: 330.1 bits (845), Expect = 1.6e-89
Identity = 162/187 (86.63%), Postives = 175/187 (93.58%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKR APKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Cucsa.181760 vs. Swiss-Prot
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 4.6e-89
Identity = 161/187 (86.10%), Postives = 177/187 (94.65%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKR APKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Cucsa.181760 vs. Swiss-Prot
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 3.8e-83
Identity = 153/184 (83.15%), Postives = 171/184 (92.93%), Query Frame = 1


Query: 4   DLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLS 63
           DL AGGK+KKTKR +PKS+DIYLKLLVKLYRFLVRRT SNFNAVILKRLFMSKVN+PPLS
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 64  LSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFD 123
           LSRLI++ +GKE KI VVVG +TDDIRVY+VP +KV AL+FTETARARI+KAGGECLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 124 QLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSR 183
           QLALR PL  +TVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFE+ARG+R SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 180

Query: 184 GYRV 188
           G+RV
Sbjct: 181 GFRV 183

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BLAST of Cucsa.181760 vs. Swiss-Prot
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3)

HSP 1 Score: 291.2 bits (744), Expect = 8.1e-78
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKR  PKSDD+YLKLLVK  R+LVRRT S FNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI KAGGECL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 121 TFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGK 180
           TFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K E ARG+
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 181 RNSRGYRV 188
           R SRG++V
Sbjct: 181 RRSRGFKV 188

[Close]

BLAST of Cucsa.181760 vs. Swiss-Prot
Match: RL18_RAT (60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=1 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-65
Identity = 126/188 (67.02%), Postives = 150/188 (79.79%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MG+D +   K +K +R  PKS DIYL+LLVKLYRFL RRT S FN V+LKRLFMS+ N+P
Sbjct: 1   MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 60

Query: 61  PLSLSRLIQFTK--GKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGE 120
           PLSLSR+I+  K  G+E+K AVVVGTITDD+R+ EVP LKV ALR +  AR+RI KAGG+
Sbjct: 61  PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGK 120

Query: 121 CLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARG 180
            LTFDQLAL +P G+ TVLL GP+  RE  +HFG APG PHSH+KPYVRSKGRKFERARG
Sbjct: 121 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 180

Query: 181 KRNSRGYR 187
           +R SRGY+
Sbjct: 181 RRASRGYK 187

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BLAST of Cucsa.181760 vs. TrEMBL
Match: A0A0A0LWD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569250 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 9.9e-99
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 58  MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 117

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 118 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 177

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 178 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 237

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 238 NSRGYRV 244

[Close]

BLAST of Cucsa.181760 vs. TrEMBL
Match: A0A0A0LFX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032220 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.3e-94
Identity = 175/187 (93.58%), Postives = 182/187 (97.33%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           P+SLSRLI++  GKE +IAV+VGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKYMNGKEGRIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Cucsa.181760 vs. TrEMBL
Match: V7CY53_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G208200g PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.6e-94
Identity = 175/187 (93.58%), Postives = 183/187 (97.86%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL AGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLI++TKGKE+KIAVVVG +TDDIRVYEVPALKV ALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIRYTKGKENKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSHSKPYVR+KGRKFERARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHSKPYVRAKGRKFERARGRR 180

Query: 181 NSRGYRV 188
           NSRG+RV
Sbjct: 181 NSRGFRV 187

[Close]

BLAST of Cucsa.181760 vs. TrEMBL
Match: W9QQ74_9ROSA (60S ribosomal protein L18-3 OS=Morus notabilis GN=L484_011109 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-93
Identity = 174/186 (93.55%), Postives = 182/186 (97.85%), Query Frame = 1


Query: 2   GIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPP 61
           GIDLVAGGKSKK+KR APKSDDIYLKLLVKLYRFLVRRTGSNFNAV+LKRLFMSKVNKPP
Sbjct: 12  GIDLVAGGKSKKSKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVVLKRLFMSKVNKPP 71

Query: 62  LSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLT 121
           LSLSRLI+F KGKE K+AVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLT
Sbjct: 72  LSLSRLIRFMKGKEDKVAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLT 131

Query: 122 FDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRN 181
           FDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKRN
Sbjct: 132 FDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRN 191

Query: 182 SRGYRV 188
           SRG+RV
Sbjct: 192 SRGFRV 197

[Close]

BLAST of Cucsa.181760 vs. TrEMBL
Match: A0A0S3S0H8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G393200 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-93
Identity = 175/187 (93.58%), Postives = 182/187 (97.33%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL AGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLI++TKGKE KIAVVVG +TDDIRVYEVPALKVAALRFTETARARIEK GGECL
Sbjct: 61  PLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVAALRFTETARARIEKVGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVRSKGRKFERARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 181 NSRGYRV 188
           NSRG+RV
Sbjct: 181 NSRGFRV 187

[Close]

BLAST of Cucsa.181760 vs. TAIR10
Match: AT3G05590.1 (AT3G05590.1 ribosomal protein L18)

HSP 1 Score: 330.1 bits (845), Expect = 8.9e-91
Identity = 162/187 (86.63%), Postives = 175/187 (93.58%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKR APKSDD+YLKL VKLYRFLVRRT S FN VILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Cucsa.181760 vs. TAIR10
Match: AT5G27850.1 (AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 328.6 bits (841), Expect = 2.6e-90
Identity = 161/187 (86.10%), Postives = 177/187 (94.65%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDL+AGGKSKKTKR APKSDD+YLKLLVKLYRFLVRR+ SNFNAVILKRLFMSKVNK 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV ALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFE+ARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 181 NSRGYRV 188
            SRG++V
Sbjct: 181 KSRGFKV 187

[Close]

BLAST of Cucsa.181760 vs. TAIR10
Match: AT2G47570.1 (AT2G47570.1 Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-53
Identity = 100/135 (74.07%), Postives = 117/135 (86.67%), Query Frame = 1


Query: 54  MSKVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIE 113
           MSKVNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI 
Sbjct: 1   MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60

Query: 114 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 173
           KAGGECLTFDQLAL  P   +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR  G+K
Sbjct: 61  KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120

Query: 174 FERARGKRNSRGYRV 188
            E ARG+R SRG++V
Sbjct: 121 IEIARGRRRSRGFKV 135

[Close]

BLAST of Cucsa.181760 vs. NCBI nr
Match: gi|778662398|ref|XP_011659839.1| (PREDICTED: 60S ribosomal protein L18-2-like [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Cucsa.181760 vs. NCBI nr
Match: gi|700210952|gb|KGN66048.1| (hypothetical protein Csa_1G569250 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 58  MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 117

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 118 PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 177

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 178 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 237

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 238 NSRGYRV 244

[Close]

BLAST of Cucsa.181760 vs. NCBI nr
Match: gi|659099453|ref|XP_008450608.1| (PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 7.1e-98
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           PLSLSRLIQF KGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL
Sbjct: 61  PLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Cucsa.181760 vs. NCBI nr
Match: gi|659070222|ref|XP_008454015.1| (PREDICTED: 60S ribosomal protein L18-3 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 4.3e-95
Identity = 178/187 (95.19%), Postives = 184/187 (98.40%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           P+SLSRLI++ KGKE+KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKYMKGKEAKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

[Close]

BLAST of Cucsa.181760 vs. NCBI nr
Match: gi|449454059|ref|XP_004144773.1| (PREDICTED: 60S ribosomal protein L18-3 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 6.2e-94
Identity = 175/187 (93.58%), Postives = 182/187 (97.33%), Query Frame = 1


Query: 1   MGIDLVAGGKSKKTKRVAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60
           MGIDLVAGGKSKKTKR APKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKP 60

Query: 61  PLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECL 120
           P+SLSRLI++  GKE +IAV+VGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECL
Sbjct: 61  PISLSRLIKYMNGKEGRIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKR 180
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSH+KPYVRSKGRKFERARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKR 180

Query: 181 NSRGYRV 188
           NSRGYRV
Sbjct: 181 NSRGYRV 187

The following BLAST results are available for this feature:

BLAST of Cucsa.181760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL182_ARATH	1.6e-89	86.63	60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2	[more]
RL183_ARATH	4.6e-89	86.10	60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1	[more]
RL18_CICAR	3.8e-83	83.15	60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1	[more]
RL181_ARATH	8.1e-78	76.60	Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3	[more]
RL18_RAT	1.2e-65	67.02	60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=1 SV=2	[more]

BLAST of Cucsa.181760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWD1_CUCSA	9.9e-99	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569250 PE=4 SV=1	[more]
A0A0A0LFX7_CUCSA	4.3e-94	93.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032220 PE=4 SV=1	[more]
V7CY53_PHAVU	9.6e-94	93.58	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G208200g PE=4 SV=1	[more]
W9QQ74_9ROSA	1.3e-93	93.55	60S ribosomal protein L18-3 OS=Morus notabilis GN=L484_011109 PE=4 SV=1	[more]
A0A0S3S0H8_PHAAN	1.3e-93	93.58	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G393200 PE=...	[more]

BLAST of Cucsa.181760 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05590.1	8.9e-91	86.63	ribosomal protein L18	[more]
AT5G27850.1	2.6e-90	86.10	Ribosomal protein L18e/L15 superfamily protein	[more]
AT2G47570.1	1.1e-53	74.07	Ribosomal protein L18e/L15 superfamily protein	[more]

BLAST of Cucsa.181760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662398\|ref\|XP_011659839.1\|	1.4e-98	100.00	PREDICTED: 60S ribosomal protein L18-2-like [Cucumis sativus]	[more]
gi\|700210952\|gb\|KGN66048.1\|	1.4e-98	100.00	hypothetical protein Csa_1G569250 [Cucumis sativus]	[more]
gi\|659099453\|ref\|XP_008450608.1\|	7.1e-98	99.47	PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo]	[more]
gi\|659070222\|ref\|XP_008454015.1\|	4.3e-95	95.19	PREDICTED: 60S ribosomal protein L18-3 [Cucumis melo]	[more]
gi\|449454059\|ref\|XP_004144773.1\|	6.2e-94	93.58	PREDICTED: 60S ribosomal protein L18-3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000039	Ribosomal_L18e
IPR021131	Ribosomal_L18e/L15P
IPR000039	Ribosomal_L18e
IPR021131	Ribosomal_L18e/L15P

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.181760.2	Cucsa.181760.2	mRNA
Cucsa.181760.1	Cucsa.181760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 1..134 score: 3.4E
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF17135	Ribosomal_L18	coord: 1..134 score: 2.5
IPR021131	Ribosomal protein L18e/L15P	unknown	SSF52080	Ribosomal proteins L15p and L18e	coord: 2..86 score: 3.79
None	No IPR available	GENE3D	G3DSA:3.100.10.10		coord: 3..86 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.181760	Cla005209	Watermelon (97103) v1	cgywmB347
Cucsa.181760	Csa1G569250	Cucumber (Chinese Long) v2	cgycuB278
Cucsa.181760	MELO3C015293	Melon (DHL92) v3.5.1	cgymeB328
Cucsa.181760	ClCG03G017220	Watermelon (Charleston Gray)	cgywcgB323
Cucsa.181760	CSPI01G26310	Wild cucumber (PI 183967)	cgycpiB288
Cucsa.181760	CmaCh11G011960	Cucurbita maxima (Rimu)	cgycmaB0518
Cucsa.181760	CmaCh12G010520	Cucurbita maxima (Rimu)	cgycmaB0520
Cucsa.181760	CmoCh12G010620	Cucurbita moschata (Rifu)	cgycmoB0521
Cucsa.181760	CmoCh11G012420	Cucurbita moschata (Rifu)	cgycmoB0520
Cucsa.181760	CmoCh10G012120	Cucurbita moschata (Rifu)	cgycmoB0517
Cucsa.181760	Lsi06G000940	Bottle gourd (USVL1VR-Ls)	cgylsiB304
Cucsa.181760	Cp4.1LG18g00410	Cucurbita pepo (Zucchini)	cgycpeB0499
Cucsa.181760	MELO3C015293.2	Melon (DHL92) v3.6.1	cgymedB323
Cucsa.181760	CsaV3_1G038670	Cucumber (Chinese Long) v3	cgycucB293
Cucsa.181760	Cla97C03G067580	Watermelon (97103) v2	cgywmbB327
Cucsa.181760	Bhi02G001712	Wax gourd	cgywgoB372
Cucsa.181760	Carg16991	Silver-seed gourd	carcgyB0540

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.181760	Cucurbita maxima (Rimu)	cgycmaB0517