CmaCh12G005220 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G005220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Succinate dehydrogenase subunit 5, mitochondrial
Location	Cma_Chr12 : 2715043 .. 2721800 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGAATCTAATTCAAAAGCATGCAGACATTGTTGGCTATGGGTGAGGTGACGAAGGAGGCATTGAAAGGAAATCCTGATTTCTTCGCAATAAAACCAACGGATTACTCAAGATTTGTGGTAATATCATTGGGGACTGGCTGTCCAAAAGATGAAATGAAGTACACAGCAGAGAAAGCAGCCAAATGGGGGCTGTTGCAATGGCTGACTGCTAGCGGTTCAACGCCGATCATCGACGTGTTTTCTCATGCAAGTTCTGATATGGTCGATCTTCATCTTTCGGTCGTGTTCAAAGCCCTTCGTTGCGAAAACAACTATCTTCGAATACAGGTTTTGTTCTTATTCTTGTTCTTGTTTTGATATCTTGGTGGATTGTCATGTTTGAGTGAACCGTCGTGATTATAGGACGATATGTTGAGCAGCGTAGTATCGTCGGTGGACATAGCCACGAAGAAGAACTTGGATGATCTTGTTAGGGTTGGTGAAAATTTGTTGAAGAAACCCGTGTCTAGAGTTAATTTGGAAACCGGTGTCTTTGAAGCTTCTGATGCTGAAACTAATGAACAAGCTCTTACAAGGTAAAAAAAATTACATCCATGGTCTTTTTTTATAGATGCTTCAAATTCGAGTTTAGATTTCATTTGGTCTTTTTAAGTTTCAAAATGTTACATTTTTGCTCGGTTTTAAAATTTAATATCTATTTGGACCCTAAATTTTAAATTATTATATTTCTACCCCTCAATTTTGAGTTTTTAATTTAATATCTTTTTGGTCCTCCACTTAGGGTTTAGGGTTGTCTAATTTTTTAAATTAATTTTTATGGGTGATGGAATATAGTGAAACTAAATATTTAAATTAACTAATTAACAGAAATGACAAATAAAATAAAATAAAACGAAAAATTAGTAAAAATTGAAGGTCTAAGGTGTAAAATGTTAAAAATATATAATGTAAACTAAATTCAAATTTTAGGAATAAAATTTAGAAATAAAAATGCAATATTTTGAAATTTATTTAAGTAATTAAAATTTAATTTTTTTAAATCATTATTATTATTATTATTATTTGTATAAAATAAAAATGCAATATTTCGATTTTATAATTTGTGTCAGTTCGTGGGTTGACTTTTTTTTATTGGATTAACTCGTACCTTATTTTTTCTATTTGATGTTTGTAATTGATGTTAATGATGTAGTATAACCAGCGAATATTTGATATTTGAGTCTTATGAAATTTCAGTTATTAATATAATATTTACGGTGAATAAATAAGAGTTTTTTAAATAATTAAAAAAAAAACATTCGTATAACCCAACCCAACCTAACAAGTCTGAAAATTGAACGTCGTGTTGAGTTAGGTTGTGTGCCAATTAGTCTGAAATTTTCAAAAAAAAATTCCCAATTCAAATATGAATATTTTAGAAAAAAGAAAAATTGAATTATATTAAATAGGTATGAATTATAGGAATTTTTTGAATGAAAGATATAAATTATAATATTATTTACCAAGTTTAATTAAAATTATTATTACCATTTATTTGATATTTTTGATATGATTAGGAAAACATTCCGAAAATTAATTATTAAAAAACAAAATAATTAAATTATCGAATTGTTTAAAAAGCTTTTGCATTAAATTTTTGAATCCCACATCGGAAAACGTGAAAGTGCAACTCTGCAGTCGGGCTATAAAAGGGAAGCGAAGTGTTGTGCAATAGCCATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTTCTAACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAAACCCCCTCTTAGGCCTGGGTTTGGCTCAGGCCTTCGAGAATTTCTGGAAGGGCTCCCTTCGGGGTAAAGCCCTACAATTCTCAGTTCAAAATTTTCATTATTTAAAAATAAATTTATATTATATTTGAATTAAAACATTTGATATAATATAATTAAATTATATTATTTTACATTACCTCTAACCTAAAATTTAAAAATAACTTTATATTGTTCAATACATTTTATCTATAATTTATTTAGGAATATTAATTTAAATTAAAATTAAAAGTCTATAAAGAAAATAAAAAAAATTAAAGAATATATCATATTCTATAAATGAACTGTGAAAATAAAAAAACAAAAAATTATCCAAAATGTGAGGATTGGGCCATGGGCTTCTAATGGCCCAACAATAAAAACAAATGAAGTAGAAGGTGAGAGTGACAGGTGTCAATGTAATGTGTGTAATTACGTATTTACCCTTCTTGTTTTTTTCTTCCCCCATCATTTCGATTCATTCCATCATTCCTCCAGCCTCCGAAGTTGGCTTTCAATTTTGCAGTCCGAGGAAAAAGCGAAAGCGATGGAGAAAATGGTTGTTCTTAGATCACTATTGCGTTCTGTCCGCGCCGGATCTTACAGCATCGCCGGCGTCCGACACCGGAGTTTATTGCAAAGTCACTACCAGGCCGCTCGGAATTTCTCCCATCTATCGTCGCCTCGTTCTTCTTTCTCAGATTCTCCGCAGAGAGTTTCTTATGGTACTCCTTTTAATTTGTTGTACTCGTAATTTTTTTTTTTATAGATTCAAATGTCTCCGGATTGATTTTGCACGGAAGTGTGGGGTTTCTGACGAAGTTATGCACTATTCTTTATTTAACTTATTTAATGATTGTTGATATACTTGTGGATGGTTCTTCCTTCATCGAGTGTACATGCAGATGTATTTCTTTCAATTCAAAGTTTTGTTTGCTGTATTTGTACAGTAAATAGCTATATTCTTTACTGTATTAATATTTATCATGAAGTCGACTGTGCGAGAAGCCTTCACAGTCTGCAATTTGTAGATAATTTTGTTGTGAAATATAAATTTTAAGCAATGCCTTTGTAAGAATTGCAAGAAAATCAATCTTGTAATGGAGAGCAAGGAATATCAAGTGGAGTTTTAGAAGTCATTTACCTTTCCAAAACTGAATATCATTCCTGATAGCAAACATATAGTTTGATTAATTCGTAAAAGATAAGATCCATGGGAGAAGCTAAAAATTTCAACATGTTCTGTGCAGCAATTGTGCATTGTACAAATTTTACTGCCCCAACCTGCCACGATTATCTAGAGTGACTGAAAAATCTACATAGACACTTCAATTGTTTTTTCAGTATTATAATGTTTGATACGATATCATATTCATGTTTCATCTGGTAAATTTCGGCAGATTGTGGCTATCTATCTGGCGTAGGGCACGCTAGATTTTTTAGTGTTGATGTAGCTCATATGCCTACAATTGAAGATTCCAAGCTTCAGAATGCTTTCAAGGATTTGATGGCCGCAAGTTGGGATAATCTTCCTGAGTCTGTTGTTTATGATGTGAAGGTAGCATTATCTGGAAGCACCAACGATGAGGCCGGAAAGGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCATCCGAGGAGTTTGGTGGTATACTTACCAGCTTGAAAATGAAAATCGATGATAGCATTGGTCTTAGCGGCGAGGTATTGGAAATTATAGATTTATCAAATTCAAACCCCATTTGAAACCATTTAGTTCTTGAAAATCAAACTTATAGACACTACTTCCACCTATGAGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTGTTATCTGTTTTGTAAAAATCTTAGTTTTGAAAACTCAAAAAAGTAGTTTTTAAAAAAAGTATTTTGGAATTTGACTCAAAATTAAATTGTTTATTTTAAAATTGTGAGAATTATTAGAAAGAATTTGAGAGGAAACGAACATAAATTTTAAAAACAGAAACTAAAAATGGTTATTGAATGAGGCCTAAGTTATTTTCTTCTCCCGTTTTTTATCAAGTTAAAACTTCTGAGTCCATCTGCAGGATGTTAAGCCTTTGTCCGATGAGCTTAAGAATGCACTACAGACGGTTCATGATCGCTATACTTCCTACTTGGATGCATTTGGTCCTGAGGAAAACTATCTGAAAAAGAAAGTGGAAACAGAGTTGGGAACAAAGATGATTCACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTACACAAGTTCCGATATGTAATCTGGCAAAGAGCATAAATTTCATTACATCGTTGCACGCTTTTGTTCGTTTAATAAATGAAATTGATCATTTGGTTGTGTTTACCATGTCTTCTTTTTTGTTTTATGACAGGTTTCTGTGCTGGGAACCTCTGGTCTATCAGGGTCATATGTCGAGCAAAGAGCATAAATTTGGCACCTTTGAAAGTTTGGCTGTAATTGCAAGCTTCCGTTAGTTTGAGTGTATGTTCTTCAATGTTTTATTGTGCATCTTCTCTCAAAACCAATTAACCGTGGAGTTAATGGCAATTGAATAAGATCTCACCTTGAGGAATGAGTAAACAGAATTTAACATCCTCATTTGTTTACCAATTATTCGGTTTCTTCTATGAGTATATATCGTCAGTTTCTAAATTTTTGCATTTCTGAGTTTTATGTTGTTCTGTGTGATCTGTGGTGGAGCCGACCTTAACTCCGATTATTGCTACAGTAACTGCGTAATTGTTATTAATAACTTAAGTGTTAAAGCATATGTTTATGAAGTAAAGAAGAGGTGAAAATTGGATATAATCAGACCACTAGCTTGGAGGAGGTCTGTTGGACTCTTCACTCCCAACATTGCCATCGAAACTTAGCACAGGACTTGGACATCAATATGTCTTTACAACTTTGGTGCCTTTATTCCATTTACTCCATGACCAAGATTCAGACGGCGATTTGGGCAGAGGAGGAAGGAACAGTGCCTTCCTGCAAAGACCGAACGGCCATCCTTCACAATGACAAAGTTCCTGCAAGGCAGTATGCCTCTTGAGATCTTCGTCTACAAAATCAAGACCATTTAAGCTCGAACCTTGGGAAAAGTTGGCCTCCACAGAAAAGAATGCTTCCTTGGTTGCAGCACTCGAACAACATGTGAGAAAACTCTGAACTGAGTAGAATTCATCTCCTGTGTTATCTTCATTTCTAGACTCACCCATTTTCTCAATCTCCATTGATGTTATATACAATTCTTTGGTTGCAGGTGAGAAAACCCAGGAAAAGCTGTCCGACAGGTTAGTCTTTCGTCTCAACTTTTCCATTGCTCGACTTCTGATTTCTGATACAATTTCCTGAGAAGAAGATAAAAAACTTAAGAGAAACATATTACATATAAGATGAAAGAGAATACAAAAGAATTAGCTGATGAGTACTTCCTCTTCATCGTCGAAGTCACTCGTAGGATATATGTCCTCTGCGTTTGAATTTGTTAGCTGTCTGCTAAAAGTATGGCAGTAGCAAAATGCATCCTTCAAAGCAGCTGCTAGAAAGGATTTCTTAGAAGGATTTGGTGGGTCTTCTTGATAAAAGACCCCCATATTTGAGAGGCTGGATTTGTTAGTTCCTTTACGAGCCAGTGACATATATAGAGAAGTAATTGCACCTCACTGCCGCTCGACTTTAGGGATCAAAATTGGCTCCATTTCTTACAGTGCCTTCTCAGCTTATTGTAAACAACGCTTTCTAATCCGTAGGTGTAAAGATAAAGTTAGAAAGAACACATGACACTCCAACTAATGATGTTGAACTGCACTAGAGATTCCAGCTGAAAGCTCACATTGCATTCTCTTTACATTACTTTGAATATTAATTGGCCATGCTATATGCTAATCTAACACCTACTTTTCAAGGCATTTGGACTCTCACTTAATGCTCAAGATTTCGGTGATTTCAGACATTTAACCAACCAATATCTCCTACTTTTGACAACTTTGTGGAGATCGGCCAGTTCCACTGTTCGAGGTCATGGGAGAGAAGAGTACGAAACCAAATCAACCGATCTTTAAAAGTCGGGTCTCAATCTGGTATGCTGTTTACGTATACTTTTCTTATTTAGTACCACTGGGTATAAGTAGATAAAGTGTCTTGATTTTCTTTTTCTTTTAATCAAACTTGATGTCGAACCAAAGTATCGATTCAAAGAGAACTTGGAAATTGATATCAAAACTGACCTTTGGAAAATCTAGAACATCAAATCTATAACTACACCATATCAATTATTTTTTTTGGATATTCGCAAGGGTCTGAAATAGTTTGCATGCATCTCAGTTGTTGTTACGCGACAATCCATCGTACTTTGCTATATTTGTCGTAAGGAAACTCAAAAATGCTATATTTGTCGTAAGGAAACTCAAAAATGCTATATTTGTTGTAAGGAAACTCGTAAGATACTAAATTCTAGAAAAGTGACTGGATAGGACATGGTGGTGGTGTGTGGTGCGCATTAAATGAGACTCGTCTCGTTAGGCTGTTCGTTTGAACTGTAAGTAATTATAACCAGGCTCTCCCAAGACTCGTGACTAGGAAGTGCATATTGGATGCTCCGTTGGAGCTATATGTTTATTGATGGCGAATTTTGAGTTGTTCTCCATCATGCTTGTTACGTGAGGCAAAGCATCTTCATATACGGCTATGCTTAAAGTCCAAGATGATATTGGTGAAGATTTATTCCTACAAGATGTGATGGAGATGGAGATGGAGACACCTTATCTTAAAGTAAGTTGAGAATAATATTATTAGGTAATTCTTGACTTCAAAAATTACTTTTCTTTTCACTTTTAGTCCTTACAAAGGAATAACCTTAGCTTCGGTTAATTGTGTTAGAATTTTTAGAAAAATGATGACTTGTCCATTCTAGTTTGTTG

mRNA sequence

ATTAGAATCTAATTCAAAAGCATGCAGACATTGTTGGCTATGGGTGAGGTGACGAAGGAGGCATTGAAAGGAAATCCTGATTTCTTCGCAATAAAACCAACGGATTACTCAAGATTTGTGGTAATATCATTGGGGACTGGCTGTCCAAAAGATGAAATGAAGTACACAGCAGAGAAAGCAGCCAAATGGGGGCTGTTGCAATGGCTGACTGCTAGCGGTTCAACGCCGATCATCGACGTGTTTTCTCATGCAAGTTCTGATATGGTCGATCTTCATCTTTCGGTCGTGTTCAAAGCCCTTCGTTGCGAAAACAACTATCTTCGAATACAGGACGATATGTTGAGCAGCGTAGTATCGTCGGTGGACATAGCCACGAAGAAGAACTTGGATGATCTTGTTAGGGTTGGTGAAAATTTGTTGAAGAAACCCGTGTCTAGAGTTAATTTGGAAACCGGTGTCTTTGAAGCTTCTGATGCTGAAACTAATGAACAAGCTCTTACAAGCCTCCGAAGTTGGCTTTCAATTTTGCAGTCCGAGGAAAAAGCGAAAGCGATGGAGAAAATGGTTGTTCTTAGATCACTATTGCGTTCTGTCCGCGCCGGATCTTACAGCATCGCCGGCGTCCGACACCGGAGTTTATTGCAAAGTCACTACCAGGCCGCTCGGAATTTCTCCCATCTATCGTCGCCTCGTTCTTCTTTCTCAGATTCTCCGCAGAGAGTTTCTTATGATTGTGGCTATCTATCTGGCGTAGGGCACGCTAGATTTTTTAGTGTTGATGTAGCTCATATGCCTACAATTGAAGATTCCAAGCTTCAGAATGCTTTCAAGGATTTGATGGCCGCAAGTTGGGATAATCTTCCTGAGTCTGTTGTTTATGATGTGAAGGTAGCATTATCTGGAAGCACCAACGATGAGGCCGGAAAGGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCATCCGAGGAGTTTGGTGGTATACTTACCAGCTTGAAAATGAAAATCGATGATAGCATTGGTCTTAGCGGCGAGGATGTTAAGCCTTTGTCCGATGAGCTTAAGAATGCACTACAGACGGTTCATGATCGCTATACTTCCTACTTGGATGCATTTGGTCCTGAGGAAAACTATCTGAAAAAGAAAGTGGAAACAGAGTTGGGAACAAAGATGATTCACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTTTCTGTGCTGGGAACCTCTGGTCTATCAGGGTCATATGTCGAGCAAAGAGCATAAATTTGGCACCTTTGAAAGTTTGGCTGTAATTGCAAGCTTCCGTTAGTTTGAGTGTATGTTCTTCAATGTTTTATTGTGCATCTTCTCTCAAAACCAATTAACCGTGGAGTTAATGGCAATTGAATAAGATCTCACCTTGAGGAATGAGTAAACAGAATTTAACATCCTCATTTGTTTACCAATTATTCGGTTTCTTCTATGAGTATATATCGTCAGTTTCTAAATTTTTGCATTTCTGAGTTTTATGTTGTTCTGTGTGATCTGTGGTGGAGCCGACCTTAACTCCGATTATTGCTACAGTAACTGCGTAATTGTTATTAATAACTTAAGTGTTAAAGCATATGTTTATGAAGTAAAGAAGAGGTGAAAATTGGATATAATCAGACCACTAGCTTGGAGGAGGTCTGTTGGACTCTTCACTCCCAACATTGCCATCGAAACTTAGCACAGGACTTGGACATCAATATGTCTTTACAACTTTGGTGCCTTTATTCCATTTACTCCATGACCAAGATTCAGACGGCGATTTGGGCAGAGGAGGAAGGAACAGTGCCTTCCTGCAAAGACCGAACGGCCATCCTTCACAATGACAAAGTTCCTGCAAGGCAGTATGCCTCTTGAGATCTTCGTCTACAAAATCAAGACCATTTAAGCTCGAACCTTGGGAAAAGTTGGCCTCCACAGAAAAGAATGCTTCCTTGGTTGCAGCACTCGAACAACATGTGAGAAAACCCAGGAAAAGCTGTCCGACAGACATTTAACCAACCAATATCTCCTACTTTTGACAACTTTGTGGAGATCGGCCAGTTCCACTGTTCGAGGTCATGGGAGAGAAGAGTACGAAACCAAATCAACCGATCTTTAAAAGTCGGGTCTCAATCTGGTATGCTGTTTACGTATACTTTTCTTATTTAGTACCACTGGGTATAAGTAGATAAAGTGTCTTGATTTTCTTTTTCTTTTAATCAAACTTGATGTCGAACCAAAGTATCGATTCAAAGAGAACTTGGAAATTGATATCAAAACTGACCTTTGGAAAATCTAGAACATCAAATCTATAACTACACCATATCAATTATTTTTTTTGGATATTCGCAAGGGTCTGAAATAGTTTGCATGCATCTCAGTTGTTGTTACGCGACAATCCATCGTACTTTGCTATATTTGTCGTAAGGAAACTCAAAAATGCTATATTTGTCGTAAGGAAACTCAAAAATGCTATATTTGTTGTAAGGAAACTCGTAAGATACTAAATTCTAGAAAAGTGACTGGATAGGACATGGTGGTGGTGTGTGGTGCGCATTAAATGAGACTCGTCTCGTTAGGCTGTTCGTTTGAACTGTAAGTAATTATAACCAGGCTCTCCCAAGACTCGTGACTAGGAAGTGCATATTGGATGCTCCGTTGGAGCTATATGTTTATTGATGGCGAATTTTGAGTTGTTCTCCATCATGCTTGTTACGTGAGGCAAAGCATCTTCATATACGGCTATGCTTAAAGTCCAAGATGATATTGGTGAAGATTTATTCCTACAAGATGTGATGGAGATGGAGATGGAGACACCTTATCTTAAAGTAAGTTGAGAATAATATTATTAGGTAATTCTTGACTTCAAAAATTACTTTTCTTTTCACTTTTAGTCCTTACAAAGGAATAACCTTAGCTTCGGTTAATTGTGTTAGAATTTTTAGAAAAATGATGACTTGTCCATTCTAGTTTGTTG

Coding sequence (CDS)

ATGCAGACATTGTTGGCTATGGGTGAGGTGACGAAGGAGGCATTGAAAGGAAATCCTGATTTCTTCGCAATAAAACCAACGGATTACTCAAGATTTGTGGTAATATCATTGGGGACTGGCTGTCCAAAAGATGAAATGAAGTACACAGCAGAGAAAGCAGCCAAATGGGGGCTGTTGCAATGGCTGACTGCTAGCGGTTCAACGCCGATCATCGACGTGTTTTCTCATGCAAGTTCTGATATGGTCGATCTTCATCTTTCGGTCGTGTTCAAAGCCCTTCGTTGCGAAAACAACTATCTTCGAATACAGGACGATATGTTGAGCAGCGTAGTATCGTCGGTGGACATAGCCACGAAGAAGAACTTGGATGATCTTGTTAGGGTTGGTGAAAATTTGTTGAAGAAACCCGTGTCTAGAGTTAATTTGGAAACCGGTGTCTTTGAAGCTTCTGATGCTGAAACTAATGAACAAGCTCTTACAAGCCTCCGAAGTTGGCTTTCAATTTTGCAGTCCGAGGAAAAAGCGAAAGCGATGGAGAAAATGGTTGTTCTTAGATCACTATTGCGTTCTGTCCGCGCCGGATCTTACAGCATCGCCGGCGTCCGACACCGGAGTTTATTGCAAAGTCACTACCAGGCCGCTCGGAATTTCTCCCATCTATCGTCGCCTCGTTCTTCTTTCTCAGATTCTCCGCAGAGAGTTTCTTATGATTGTGGCTATCTATCTGGCGTAGGGCACGCTAGATTTTTTAGTGTTGATGTAGCTCATATGCCTACAATTGAAGATTCCAAGCTTCAGAATGCTTTCAAGGATTTGATGGCCGCAAGTTGGGATAATCTTCCTGAGTCTGTTGTTTATGATGTGAAGGTAGCATTATCTGGAAGCACCAACGATGAGGCCGGAAAGGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCATCCGAGGAGTTTGGTGGTATACTTACCAGCTTGAAAATGAAAATCGATGATAGCATTGGTCTTAGCGGCGAGGATGTTAAGCCTTTGTCCGATGAGCTTAAGAATGCACTACAGACGGTTCATGATCGCTATACTTCCTACTTGGATGCATTTGGTCCTGAGGAAAACTATCTGAAAAAGAAAGTGGAAACAGAGTTGGGAACAAAGATGATTCACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTTTCTGTGCTGGGAACCTCTGGTCTATCAGGGTCATATGTCGAGCAAAGAGCATAA

Protein sequence

MQTLLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWLTASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNLDDLVRVGENLLKKPVSRVNLETGVFEASDAETNEQALTSLRSWLSILQSEEKAKAMEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYDCGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTNDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDRYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA

Homology

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BLAST of CmaCh12G005220 vs. Swiss-Prot
Match: SDH5_ARATH (Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana GN=SDH5 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.9e-67
Identity = 130/187 (69.52%), Postives = 153/187 (81.82%), Query Frame = 1


Query: 234 VSYDCGY--LSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVA 293
           VS D  Y    G+G  R FS DV+HMP +EDS + NAFKDLMAA W  LP +VV D K A
Sbjct: 71  VSRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTA 130

Query: 294 LSGSTNDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNAL 353
           +S +T+D+AG+E ++NVFRAAEA EEFGGILTS+KM+IDDSIG+SGE VKPL +++ +AL
Sbjct: 131 ISKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDAL 190

Query: 354 QTVHDRYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSG 413
           +T + RY  YLD+F PEE YLKKKVE ELGTKMIHLKMRCSGLGSEWGKV+VLGTSGLSG
Sbjct: 191 RTAYQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250

Query: 414 SYVEQRA 419
           SYVEQRA
Sbjct: 251 SYVEQRA 257

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BLAST of CmaCh12G005220 vs. Swiss-Prot
Match: SDH5_ORYSJ (Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH5 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.6e-57
Identity = 104/171 (60.82%), Postives = 140/171 (81.87%), Query Frame = 1


Query: 248 RFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTNDEAGKEIVEN 307
           R FS +  H+P I D ++++AFKDLMAASW  LP+S+V + K A S +T+D+AGKE + N
Sbjct: 61  RLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLN 120

Query: 308 VFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDRYTSYLDAFGP 367
           VFRAAEA EEFGG+L +L+M +DD  G++GE+V PL   +++A+++ + RY  YL++FGP
Sbjct: 121 VFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGP 180

Query: 368 EENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 419
           EENYL+KKVE ELGTKMIHLKMRCSG+GSEWGK++++GTSG+SGSYVE RA
Sbjct: 181 EENYLRKKVENELGTKMIHLKMRCSGVGSEWGKITLIGTSGISGSYVELRA 231

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BLAST of CmaCh12G005220 vs. Swiss-Prot
Match: PLP2_ARATH (Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-46
Identity = 100/173 (57.80%), Postives = 121/173 (69.94%), Query Frame = 1


Query: 4   LLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWLT 63
           LLA+GEVT E   G+ DFF I+P DY RF+V+SLGTG  K E K+ A++ A WGLL WLT
Sbjct: 225 LLAIGEVTNEISGGSSDFFPIRPNDYGRFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLT 284

Query: 64  ASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNLD 123
              STPIID FS ASSDMVD HLS VF+AL  E NY+RIQDD L+   +SVDIAT +NLD
Sbjct: 285 HDNSTPIIDAFSQASSDMVDFHLSAVFRALHSEANYIRIQDDTLTGDAASVDIATVENLD 344

Query: 124 DLVRVGENLLKKPVSRVNLETGVFEASDAETNEQALTSLRSWLSILQSEEKAK 177
            L + G+ LLKKPV+RVNL++G  E +   TNE AL  L     IL  E+K +
Sbjct: 345 ILAKTGDELLKKPVARVNLDSGCNENAYETTNEHALIKL---AGILSKEKKIR 394

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BLAST of CmaCh12G005220 vs. Swiss-Prot
Match: PLP3_ARATH (Patatin-like protein 3 OS=Arabidopsis thaliana GN=PLP3 PE=2 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 9.4e-42
Identity = 92/175 (52.57%), Postives = 123/175 (70.29%), Query Frame = 1


Query: 3   TLLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWL 62
           TL A+ EVTK+ +K NP    I P D++RF+VIS+GTG  +++ KY A+ A+KWGL+ W+
Sbjct: 248 TLCAIAEVTKQIIKKNPVMGDISPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWV 307

Query: 63  TASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNL 122
             SGSTPI+D +S A  DMVD   SVVF+ALR E NYLRI DD L   + SVDI+T+KN+
Sbjct: 308 FESGSTPILDCYSEAIHDMVDYQSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNM 367

Query: 123 DDLVRVGENLLKKPVSRVNLETGVFE-ASDAETNEQALTSLRSWLSILQSEEKAK 177
           + LV VGE LLKK VSRVNLE+G ++  S+  TNE+A   L+ +  +L  E K +
Sbjct: 368 EGLVEVGEALLKKRVSRVNLESGHYQPISENVTNEEA---LKRFAKVLSEERKLR 419

[Close]

BLAST of CmaCh12G005220 vs. Swiss-Prot
Match: PLP1_ARATH (Patatin-like protein 1 OS=Arabidopsis thaliana GN=PLP1 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 5.1e-40
Identity = 83/184 (45.11%), Postives = 125/184 (67.93%), Query Frame = 1


Query: 3   TLLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWL 62
           TL+AM  V+K+ +K NPD   +KP  + RF+VIS+GTG  K E KY+A+KAAKWG++ WL
Sbjct: 224 TLVAMTAVSKQIVKNNPDMGKLKPLGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWL 283

Query: 63  TASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNL 122
              GSTPI+D+   +S DM+  H SVVFKAL+ E+ YLRI DD L   VS++D+ATK NL
Sbjct: 284 YDDGSTPILDITMESSRDMIHYHSSVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNL 343

Query: 123 DDLVRVGENLLKKPVSRVNLETGVFE-ASDAETNEQALTSLRSWLSILQSEEKAKAMEKM 182
           ++L ++GE +L   V ++N++TGV+E  ++  TN++    L+ +  IL  E K + +   
Sbjct: 344 ENLQKIGEKMLTNRVMQMNIDTGVYEPVAENITNDE---QLKRYAKILSDERKLRRLRSD 403

Query: 183 VVLR 186
            +++
Sbjct: 404 TMIK 404

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BLAST of CmaCh12G005220 vs. TrEMBL
Match: A0A0A0LP60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360050 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.6e-104
Identity = 197/241 (81.74%), Postives = 218/241 (90.46%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYD 237
           MEK V+LRSLLRSVRA SY IAGV HR+LLQS++Q AR+F +LSS R SFSDSPQRVS D
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60

Query: 238 CGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTN 297
           C Y SGVGHAR+FS DV  MPTIED KLQN FKDLMAASWD LPE+V+YDVK ALSGST+
Sbjct: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120

Query: 298 DEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 357
           D+AGKEIVENVFRAAEA+EEFG +L +LKM+IDDSIGLSGE+VKPLSDELK AL TVH+R
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 358 YTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 417
           Y +YLD+FGPEENYL+KKVETELGTKMI+LKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 418 A 419
           A
Sbjct: 241 A 241

[Close]

BLAST of CmaCh12G005220 vs. TrEMBL
Match: M5XHM0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010612mg PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75
Identity = 156/250 (62.40%), Postives = 194/250 (77.60%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQS--HYQ---AARNFSHLSSP--RSSFSDS 237
           MEKMV LRSL RS+ + SY +A +  + L  S  H+    AAR     SSP  +  FSD 
Sbjct: 1   MEKMVALRSLYRSLSSRSYRVAALNQQLLCHSQPHHHNAGAARTLFSFSSPMVKDLFSD- 60

Query: 238 PQRVSYDCG--YLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDV 297
                 DC     +G+G  RF+S D++HMP I+D +L N FKDLMAASWD LP+SVV+D 
Sbjct: 61  ------DCRSPLSTGLGSRRFYSDDLSHMPPIKDPELLNVFKDLMAASWDKLPDSVVHDA 120

Query: 298 KVALSGSTNDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELK 357
           K A+S +T+D+ GKE V NVFRAAEA EEFGG++T+LKM++DDSIGLSGE+VKPLSDE  
Sbjct: 121 KAAVSKNTDDQTGKESVTNVFRAAEAVEEFGGMITTLKMELDDSIGLSGENVKPLSDEYV 180

Query: 358 NALQTVHDRYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSG 417
           NAL+T+++RYT+YLDAFGPEE YL+KKVETELGTK+I+LKMRCSG+GSEWG+++VLGTSG
Sbjct: 181 NALKTIYNRYTAYLDAFGPEETYLRKKVETELGTKLIYLKMRCSGIGSEWGRITVLGTSG 240

Query: 418 LSGSYVEQRA 419
           LSGSYVEQRA
Sbjct: 241 LSGSYVEQRA 243

[Close]

BLAST of CmaCh12G005220 vs. TrEMBL
Match: A0A067L1L3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04300 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72
Identity = 144/241 (59.75%), Postives = 186/241 (77.18%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYD 237
           MEKM+++RS+ R+    S   A + H  L   H  A+R+   LSSP  S         + 
Sbjct: 1   MEKMMLVRSICRAASFRSSRFAAITHHQL--RHLLASRSIFSLSSPSVSTPSD-----FR 60

Query: 238 CGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTN 297
             +  G+G  R+FS DV+H+P I+D +++ AFKDLMAASWD LP+ ++YDVK ALS  T+
Sbjct: 61  SSFAMGIGSTRYFSQDVSHLPAIQDPEIKRAFKDLMAASWDELPDPLIYDVKNALSKKTD 120

Query: 298 DEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 357
           D AG+EI++NVFRAAEA EEF GIL SLKM++DDSIG+SGE+V+PLS EL  AL TV++R
Sbjct: 121 DNAGQEILKNVFRAAEAVEEFSGILISLKMELDDSIGMSGENVRPLSSELTKALSTVYER 180

Query: 358 YTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 417
           Y++YLDAFGP+E+YL+KKVETELG+KMI+LKMRCSGLGSEWGKV+VLGTSGL+GSYVEQR
Sbjct: 181 YSAYLDAFGPDESYLRKKVETELGSKMIYLKMRCSGLGSEWGKVTVLGTSGLAGSYVEQR 234

Query: 418 A 419
           +
Sbjct: 241 S 234

[Close]

BLAST of CmaCh12G005220 vs. TrEMBL
Match: A0A151S807_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_027283 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72
Identity = 151/242 (62.40%), Postives = 185/242 (76.45%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSY-SIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSY 237
           ME+M+ LRSL+RS+ + SY S A   H +L  S      N      P SS    P     
Sbjct: 1   MERMMRLRSLIRSLSSRSYHSFASTSHFALRPSLLSRPHN----PLPSSSECRPP----- 60

Query: 238 DCGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGST 297
              +  G+G  RF+S DV HMP I+D++L NAFKDLMA SW  LP+SVV+ VK ALS +T
Sbjct: 61  ---FSMGLGRMRFYSEDVTHMPNIKDTELYNAFKDLMAESWSELPDSVVHGVKNALSKNT 120

Query: 298 NDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHD 357
           +D+AGKE+VENVFRAAEA EEFGGIL SLK++IDDSIG+SGEDVKPL D +KNAL+T+ D
Sbjct: 121 DDKAGKEVVENVFRAAEAVEEFGGILVSLKLEIDDSIGMSGEDVKPLPDHIKNALRTIFD 180

Query: 358 RYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQ 417
           RY++YL++FGP+E+YL+KKVE ELG KMIHLKMRCSGLG+EWGKV+VLGTSGL+GSYVEQ
Sbjct: 181 RYSTYLNSFGPDESYLRKKVEIELGAKMIHLKMRCSGLGAEWGKVTVLGTSGLAGSYVEQ 230

Query: 418 RA 419
           RA
Sbjct: 241 RA 230

[Close]

BLAST of CmaCh12G005220 vs. TrEMBL
Match: A0A061FCR8_THECC (Succinate dehydrogenase 5 OS=Theobroma cacao GN=TCM_033877 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.6e-72
Identity = 146/241 (60.58%), Postives = 184/241 (76.35%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYD 237
           MEKM++LRS+ R+    S   A V   +   +H+  +R+F  +SSP ++           
Sbjct: 1   MEKMMMLRSIYRAACIRSSRFAAVA--ATAHNHHLGSRSFFSVSSPSAANQPRNLPSGGR 60

Query: 238 CGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTN 297
                 +G  R+FS DV HMP I+D ++QN FKDLMAASWD +P SVV D K ALS +T+
Sbjct: 61  SSLAVRLGSMRYFSEDVTHMPAIKDPEIQNVFKDLMAASWDEVPYSVVQDAKKALSKNTD 120

Query: 298 DEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 357
           D+AG+E ++N+FRAAEA EEFGG+L S+KM++DDSIGLSGE+VKPLSDE  NAL+TV+ R
Sbjct: 121 DKAGQEALKNIFRAAEAVEEFGGVLMSMKMELDDSIGLSGENVKPLSDEFVNALRTVYQR 180

Query: 358 YTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 417
           YT+YLDAFGP+E YL+KKVETELG+KMI+LKMRCSGLGSEWGKV+VLGTSGLSGSYVEQR
Sbjct: 181 YTTYLDAFGPDETYLRKKVETELGSKMIYLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQR 239

Query: 418 A 419
           A
Sbjct: 241 A 239

[Close]

BLAST of CmaCh12G005220 vs. TAIR10
Match: AT1G47420.1 (AT1G47420.1 succinate dehydrogenase 5)

HSP 1 Score: 256.5 bits (654), Expect = 2.8e-68
Identity = 130/187 (69.52%), Postives = 153/187 (81.82%), Query Frame = 1


Query: 234 VSYDCGY--LSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVA 293
           VS D  Y    G+G  R FS DV+HMP +EDS + NAFKDLMAA W  LP +VV D K A
Sbjct: 71  VSRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTA 130

Query: 294 LSGSTNDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNAL 353
           +S +T+D+AG+E ++NVFRAAEA EEFGGILTS+KM+IDDSIG+SGE VKPL +++ +AL
Sbjct: 131 ISKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDAL 190

Query: 354 QTVHDRYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSG 413
           +T + RY  YLD+F PEE YLKKKVE ELGTKMIHLKMRCSGLGSEWGKV+VLGTSGLSG
Sbjct: 191 RTAYQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250

Query: 414 SYVEQRA 419
           SYVEQRA
Sbjct: 251 SYVEQRA 257

[Close]

BLAST of CmaCh12G005220 vs. TAIR10
Match: AT2G26560.1 (AT2G26560.1 phospholipase A 2A)

HSP 1 Score: 188.3 bits (477), Expect = 9.3e-48
Identity = 100/173 (57.80%), Postives = 121/173 (69.94%), Query Frame = 1


Query: 4   LLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWLT 63
           LLA+GEVT E   G+ DFF I+P DY RF+V+SLGTG  K E K+ A++ A WGLL WLT
Sbjct: 225 LLAIGEVTNEISGGSSDFFPIRPNDYGRFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLT 284

Query: 64  ASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNLD 123
              STPIID FS ASSDMVD HLS VF+AL  E NY+RIQDD L+   +SVDIAT +NLD
Sbjct: 285 HDNSTPIIDAFSQASSDMVDFHLSAVFRALHSEANYIRIQDDTLTGDAASVDIATVENLD 344

Query: 124 DLVRVGENLLKKPVSRVNLETGVFEASDAETNEQALTSLRSWLSILQSEEKAK 177
            L + G+ LLKKPV+RVNL++G  E +   TNE AL  L     IL  E+K +
Sbjct: 345 ILAKTGDELLKKPVARVNLDSGCNENAYETTNEHALIKL---AGILSKEKKIR 394

[Close]

BLAST of CmaCh12G005220 vs. TAIR10
Match: AT4G37050.1 (AT4G37050.1 PATATIN-like protein 4)

HSP 1 Score: 172.6 bits (436), Expect = 5.3e-43
Identity = 92/175 (52.57%), Postives = 123/175 (70.29%), Query Frame = 1


Query: 3   TLLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWL 62
           TL A+ EVTK+ +K NP    I P D++RF+VIS+GTG  +++ KY A+ A+KWGL+ W+
Sbjct: 248 TLCAIAEVTKQIIKKNPVMGDISPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWV 307

Query: 63  TASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNL 122
             SGSTPI+D +S A  DMVD   SVVF+ALR E NYLRI DD L   + SVDI+T+KN+
Sbjct: 308 FESGSTPILDCYSEAIHDMVDYQSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNM 367

Query: 123 DDLVRVGENLLKKPVSRVNLETGVFE-ASDAETNEQALTSLRSWLSILQSEEKAK 177
           + LV VGE LLKK VSRVNLE+G ++  S+  TNE+A   L+ +  +L  E K +
Sbjct: 368 EGLVEVGEALLKKRVSRVNLESGHYQPISENVTNEEA---LKRFAKVLSEERKLR 419

[Close]

BLAST of CmaCh12G005220 vs. TAIR10
Match: AT4G37070.2 (AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-41
Identity = 83/184 (45.11%), Postives = 125/184 (67.93%), Query Frame = 1


Query: 3   TLLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWL 62
           TL+AM  V+K+ +K NPD   +KP  + RF+VIS+GTG  K E KY+A+KAAKWG++ WL
Sbjct: 224 TLVAMTAVSKQIVKNNPDMGKLKPLGFDRFLVISIGTGSTKREEKYSAKKAAKWGIISWL 283

Query: 63  TASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNL 122
              GSTPI+D+   +S DM+  H SVVFKAL+ E+ YLRI DD L   VS++D+ATK NL
Sbjct: 284 YDDGSTPILDITMESSRDMIHYHSSVVFKALQSEDKYLRIDDDTLEGDVSTMDLATKSNL 343

Query: 123 DDLVRVGENLLKKPVSRVNLETGVFE-ASDAETNEQALTSLRSWLSILQSEEKAKAMEKM 182
           ++L ++GE +L   V ++N++TGV+E  ++  TN++    L+ +  IL  E K + +   
Sbjct: 344 ENLQKIGEKMLTNRVMQMNIDTGVYEPVAENITNDE---QLKRYAKILSDERKLRRLRSD 403

Query: 183 VVLR 186
            +++
Sbjct: 404 TMIK 404

[Close]

BLAST of CmaCh12G005220 vs. TAIR10
Match: AT4G37060.2 (AT4G37060.2 PATATIN-like protein 5)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-38
Identity = 76/174 (43.68%), Postives = 114/174 (65.52%), Query Frame = 1


Query: 3   TLLAMGEVTKEALKGNPDFFAIKPTDYSRFVVISLGTGCPKDEMKYTAEKAAKWGLLQWL 62
           TL+AM  VTK+ +  NPD   + P  Y +F+VIS+GTG  K E +Y+A+KAAKWG++ WL
Sbjct: 245 TLVAMTAVTKQIVNNNPDMGTLNPLGYDQFLVISIGTGSAKKEERYSAKKAAKWGIISWL 304

Query: 63  TASGSTPIIDVFSHASSDMVDLHLSVVFKALRCENNYLRIQDDMLSSVVSSVDIATKKNL 122
              G+TPI+D+   +S D+V  H SVVFKAL+ E+ YLRI DD L    S++D++TK NL
Sbjct: 305 YEDGTTPILDITFESSRDIVHYHSSVVFKALQSEDKYLRIDDDTLEGDASTLDLSTKSNL 364

Query: 123 DDLVRVGENLLKKPVSRVNLETGVFEASDAETNEQALTSLRSWLSILQSEEKAK 177
           ++L+++GE +L   V ++N++TG +E +    N      L+ +  IL  E K +
Sbjct: 365 ENLIKLGEKMLTNRVMQMNIDTGTYEPAAENINND--EQLKRFAKILSEERKLR 416

[Close]

BLAST of CmaCh12G005220 vs. NCBI nr
Match: gi|449470049|ref|XP_004152731.1| (PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 2.3e-104
Identity = 197/241 (81.74%), Postives = 218/241 (90.46%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYD 237
           MEK V+LRSLLRSVRA SY IAGV HR+LLQS++Q AR+F +LSS R SFSDSPQRVS D
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60

Query: 238 CGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTN 297
           C Y SGVGHAR+FS DV  MPTIED KLQN FKDLMAASWD LPE+V+YDVK ALSGST+
Sbjct: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120

Query: 298 DEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 357
           D+AGKEIVENVFRAAEA+EEFG +L +LKM+IDDSIGLSGE+VKPLSDELK AL TVH+R
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 358 YTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 417
           Y +YLD+FGPEENYL+KKVETELGTKMI+LKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 418 A 419
           A
Sbjct: 241 A 241

[Close]

BLAST of CmaCh12G005220 vs. NCBI nr
Match: gi|659087792|ref|XP_008444638.1| (PREDICTED: uncharacterized protein At1g47420, mitochondrial [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 193/241 (80.08%), Postives = 213/241 (88.38%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQRVSYD 237
           MEK V+LRSLLRSVRA SY IAGV HR+LLQS++Q AR+  +LSS RSSFSDSPQRVSYD
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSVFYLSSHRSSFSDSPQRVSYD 60

Query: 238 CGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVALSGSTN 297
           C Y SGVGHAR+FS DV  MP I+D KL   FKDLMAASWD LPE V+Y+ K ALSGST+
Sbjct: 61  CSYPSGVGHARYFSADVVSMPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTD 120

Query: 298 DEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQTVHDR 357
           D+AGKEIVENVFRAA A+EEFG IL +LKM+IDDSIGLSGE+VKPLSDELK AL TVHDR
Sbjct: 121 DKAGKEIVENVFRAAVAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDR 180

Query: 358 YTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 417
           Y +YLD+FGPEENYL+KKVETELGTKMI+LKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 418 A 419
           A
Sbjct: 241 A 241

[Close]

BLAST of CmaCh12G005220 vs. NCBI nr
Match: gi|645226782|ref|XP_008220201.1| (PREDICTED: uncharacterized protein At1g47420, mitochondrial [Prunus mume])

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 158/250 (63.20%), Postives = 195/250 (78.00%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQS--HYQ---AARNFSHLSSPRSS--FSDS 237
           MEKMV LRSL RS+ + SY +A +  + L QS  H+    AAR     SSP +   FSD 
Sbjct: 1   MEKMVALRSLYRSLSSRSYRVAVLNQQLLCQSQPHHNNAGAARTLFSFSSPMAKDLFSD- 60

Query: 238 PQRVSYDCG--YLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDV 297
                 DC     +G+G  RF+S D++HMP I+D +L N FKDLMAASWD LP+SVV+D 
Sbjct: 61  ------DCRSPLSTGLGSRRFYSDDLSHMPPIKDPELLNVFKDLMAASWDKLPDSVVHDA 120

Query: 298 KVALSGSTNDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELK 357
           K A+S +T+D+ GKE V NVFRAAEA EEFGG++T+LKM++DDSIGLSGE+VKPLSDE  
Sbjct: 121 KAAVSKNTDDQTGKESVTNVFRAAEAVEEFGGMITTLKMELDDSIGLSGENVKPLSDEYV 180

Query: 358 NALQTVHDRYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSG 417
           NAL+T+++RYT+YLDAFGPEE YL+KKVETELGTK+I+LKMRCSG+GSEWGK++VLGTSG
Sbjct: 181 NALKTIYNRYTAYLDAFGPEETYLRKKVETELGTKLIYLKMRCSGIGSEWGKITVLGTSG 240

Query: 418 LSGSYVEQRA 419
           LSGSYVEQRA
Sbjct: 241 LSGSYVEQRA 243

[Close]

BLAST of CmaCh12G005220 vs. NCBI nr
Match: gi|658063505|ref|XP_008367673.1| (PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Malus domestica])

HSP 1 Score: 291.2 bits (744), Expect = 2.9e-75
Identity = 151/246 (61.38%), Postives = 187/246 (76.02%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAG-----VRHRSLLQSHYQAARNFSHLSSPRSSFSDSPQ 237
           MEKM+ LRSL RSV   SY IA      +RH   L S   AAR   + SSP +    S  
Sbjct: 1   MEKMIALRSLYRSVSCRSYRIAAANQQLLRHSQPLHSSAAAARTLLNSSSPVAKGLSSDD 60

Query: 238 RVSYDCGYLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDVKVAL 297
              Y   +  G+G  +F+S DV+H+P I+D  L N FKDL+AASWD LP SVV++ K AL
Sbjct: 61  ---YKSPFSRGLGSRKFYSDDVSHLPAIKDPALLNVFKDLLAASWDELPNSVVHEAKAAL 120

Query: 298 SGSTNDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELKNALQ 357
           S +T+D+ GKE+V NVFRAAEA EEFGG++T+LKM++DDS+G+SGE+VKPLSDE  NAL+
Sbjct: 121 SQNTDDQTGKEVVTNVFRAAEAVEEFGGMITNLKMELDDSVGMSGENVKPLSDEYVNALK 180

Query: 358 TVHDRYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGS 417
           T++ RY +YLDAFGPEE YL+KKVETELGTK+I+LKMRCSG+GSEWGK+SVLGTSGLSGS
Sbjct: 181 TIYSRYITYLDAFGPEETYLRKKVETELGTKLIYLKMRCSGIGSEWGKISVLGTSGLSGS 240

Query: 418 YVEQRA 419
           Y+EQRA
Sbjct: 241 YIEQRA 243

[Close]

BLAST of CmaCh12G005220 vs. NCBI nr
Match: gi|596205691|ref|XP_007223782.1| (hypothetical protein PRUPE_ppa010612mg [Prunus persica])

HSP 1 Score: 290.4 bits (742), Expect = 4.9e-75
Identity = 156/250 (62.40%), Postives = 194/250 (77.60%), Query Frame = 1


Query: 178 MEKMVVLRSLLRSVRAGSYSIAGVRHRSLLQS--HYQ---AARNFSHLSSP--RSSFSDS 237
           MEKMV LRSL RS+ + SY +A +  + L  S  H+    AAR     SSP  +  FSD 
Sbjct: 1   MEKMVALRSLYRSLSSRSYRVAALNQQLLCHSQPHHHNAGAARTLFSFSSPMVKDLFSD- 60

Query: 238 PQRVSYDCG--YLSGVGHARFFSVDVAHMPTIEDSKLQNAFKDLMAASWDNLPESVVYDV 297
                 DC     +G+G  RF+S D++HMP I+D +L N FKDLMAASWD LP+SVV+D 
Sbjct: 61  ------DCRSPLSTGLGSRRFYSDDLSHMPPIKDPELLNVFKDLMAASWDKLPDSVVHDA 120

Query: 298 KVALSGSTNDEAGKEIVENVFRAAEASEEFGGILTSLKMKIDDSIGLSGEDVKPLSDELK 357
           K A+S +T+D+ GKE V NVFRAAEA EEFGG++T+LKM++DDSIGLSGE+VKPLSDE  
Sbjct: 121 KAAVSKNTDDQTGKESVTNVFRAAEAVEEFGGMITTLKMELDDSIGLSGENVKPLSDEYV 180

Query: 358 NALQTVHDRYTSYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSG 417
           NAL+T+++RYT+YLDAFGPEE YL+KKVETELGTK+I+LKMRCSG+GSEWG+++VLGTSG
Sbjct: 181 NALKTIYNRYTAYLDAFGPEETYLRKKVETELGTKLIYLKMRCSGIGSEWGRITVLGTSG 240

Query: 418 LSGSYVEQRA 419
           LSGSYVEQRA
Sbjct: 241 LSGSYVEQRA 243

The following BLAST results are available for this feature:

BLAST of CmaCh12G005220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SDH5_ARATH	4.9e-67	69.52	Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana GN=SDH5...	[more]
SDH5_ORYSJ	4.6e-57	60.82	Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica...	[more]
PLP2_ARATH	1.6e-46	57.80	Patatin-like protein 2 OS=Arabidopsis thaliana GN=PLP2 PE=1 SV=1	[more]
PLP3_ARATH	9.4e-42	52.57	Patatin-like protein 3 OS=Arabidopsis thaliana GN=PLP3 PE=2 SV=2	[more]
PLP1_ARATH	5.1e-40	45.11	Patatin-like protein 1 OS=Arabidopsis thaliana GN=PLP1 PE=1 SV=2	[more]

BLAST of CmaCh12G005220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP60_CUCSA	1.6e-104	81.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360050 PE=4 SV=1	[more]
M5XHM0_PRUPE	3.4e-75	62.40	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010612mg PE=4 SV=1	[more]
A0A067L1L3_JATCU	1.6e-72	59.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04300 PE=4 SV=1	[more]
A0A151S807_CAJCA	1.6e-72	62.40	Uncharacterized protein OS=Cajanus cajan GN=KK1_027283 PE=4 SV=1	[more]
A0A061FCR8_THECC	4.6e-72	60.58	Succinate dehydrogenase 5 OS=Theobroma cacao GN=TCM_033877 PE=4 SV=1	[more]

BLAST of CmaCh12G005220 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47420.1	2.8e-68	69.52	succinate dehydrogenase 5	[more]
AT2G26560.1	9.3e-48	57.80	phospholipase A 2A	[more]
AT4G37050.1	5.3e-43	52.57	PATATIN-like protein 4	[more]
AT4G37070.2	2.9e-41	45.11	Acyl transferase/acyl hydrolase/lysophospholipase superfamily protei...	[more]
AT4G37060.2	1.3e-38	43.68	PATATIN-like protein 5	[more]

BLAST of CmaCh12G005220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470049\|ref\|XP_004152731.1\|	2.3e-104	81.74	PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus]	[more]
gi\|659087792\|ref\|XP_008444638.1\|	1.8e-101	80.08	PREDICTED: uncharacterized protein At1g47420, mitochondrial [Cucumis melo]	[more]
gi\|645226782\|ref\|XP_008220201.1\|	1.3e-75	63.20	PREDICTED: uncharacterized protein At1g47420, mitochondrial [Prunus mume]	[more]
gi\|658063505\|ref\|XP_008367673.1\|	2.9e-75	61.38	PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Malus domestic...	[more]
gi\|596205691\|ref\|XP_007223782.1\|	4.9e-75	62.40	hypothetical protein PRUPE_ppa010612mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016035	Acyl_Trfase/lysoPLipase
IPR025397	DUF4370

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0008150	biological_process
cellular_component	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G005220.1	CmaCh12G005220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	unknown	SSF52151	FabD/lysophospholipase-like	coord: 7..145 score: 1.83
IPR025397	Protein of unknown function DUF4370	PFAM	PF14290	DUF4370	coord: 178..418 score: 3.8E
None	No IPR available	GENE3D	G3DSA:3.40.1090.10		coord: 3..167 score: 2.3
None	No IPR available	PANTHER	PTHR36139	FAMILY NOT NAMED	coord: 172..418 score: 5.2E
None	No IPR available	PANTHER	PTHR36139:SF1	SUBFAMILY NOT NAMED	coord: 172..418 score: 5.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G005220	Cucsa.232700	Cucumber (Gy14) v1	cgycmaB0638
CmaCh12G005220	Cla022551	Watermelon (97103) v1	cmawmB148
CmaCh12G005220	Csa2G360050	Cucumber (Chinese Long) v2	cmacuB174
CmaCh12G005220	MELO3C010886	Melon (DHL92) v3.5.1	cmameB156
CmaCh12G005220	ClCG08G015700	Watermelon (Charleston Gray)	cmawcgB169
CmaCh12G005220	CSPI02G19390	Wild cucumber (PI 183967)	cmacpiB175
CmaCh12G005220	CmoCh12G004620	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G005220	CsaV3_2G028080	Cucumber (Chinese Long) v3	cmacucB0203
CmaCh12G005220	Cla97C02G039010	Watermelon (97103) v2	cmawmbB178
CmaCh12G005220	Bhi04G000294	Wax gourd	cmawgoB0194
CmaCh12G005220	Carg25834	Silver-seed gourd	carcmaB0377
CmaCh12G005220	Carg11838	Silver-seed gourd	carcmaB0249

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G005220	CmaCh05G001990	Cucurbita maxima (Rimu)	cmacmaB199

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G005220	Cucurbita maxima (Rimu)	cmacmaB182
CmaCh12G005220	Cucurbita moschata (Rifu)	cmacmoB199
CmaCh12G005220	Cucumber (Chinese Long) v2	cmacuB186
CmaCh12G005220	Melon (DHL92) v3.5.1	cmameB182
CmaCh12G005220	Watermelon (Charleston Gray)	cmawcgB160
CmaCh12G005220	Watermelon (97103) v1	cmawmB159
CmaCh12G005220	Cucurbita pepo (Zucchini)	cmacpeB179
CmaCh12G005220	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G005220	Bottle gourd (USVL1VR-Ls)	cmalsiB184
CmaCh12G005220	Cucumber (Gy14) v2	cgybcmaB179
CmaCh12G005220	Cucumber (Gy14) v2	cgybcmaB479
CmaCh12G005220	Melon (DHL92) v3.6.1	cmamedB170
CmaCh12G005220	Melon (DHL92) v3.6.1	cmamedB198
CmaCh12G005220	Silver-seed gourd	carcmaB0135
CmaCh12G005220	Silver-seed gourd	carcmaB1067
CmaCh12G005220	Cucumber (Chinese Long) v3	cmacucB0215
CmaCh12G005220	Watermelon (97103) v2	cmawmbB194