CmaCh11G000370 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTACTGCTAACCACTGCTGTGGGCGATGCTACCGTGCGCTGGACCGCACTTTCCGGCCTGCTTTGTGGCACCATTTCATAGGCTCTTCTCCTGCTACCGTGGCGGCCATAGCCTCAATTTTCGTCATCTCTTATGAATATTCTGTTTTTCCTTTTTCCTTTTTTTTTTCTTTACTAATCTCTTCTGTATATCCAAGTGGGTAGACTGGGCCGATAGGTAGGTATTTAGGAACTTATTGGGCCGGGTTCGTGCAGGCCCAGCCCACAAACAAGAATGAGAAGACAAAAATTACAAAATTTTCTCATCAATAATAATAGTTATAATTTCACATATATTTTCCAGAGTCGACTACTTGCGAGAGTCAATATGTCTTTCCTTTTACTTGGAATCAATATCTTGATTAACTTATCAAAATAAATAAGAAATTTTTGCATTTAATCGCGATCCATCCGATATCATATATGTGTCTAGATGCTTTACTATTTACTATGTCCTTTTTCTATTATAGGGTTTGACCATTGATTCCCATTATATTATCAATTGTAGTGCAACAGCTTTTAAAGTACAAGAATAGGTAATGAAATGTTTCTATTAGTAATTCTGATGGAGTTCCTTGATATTCGGTTATGTCGAAACTACTTAGTAACCATAGCAATCACTGACATTGAAGCTGTTATGCACCGAAAGCGGAACAAATGTACTCACAACACTAATGAACGAAATTACACACAGAGACACTAAGATATTTACGTGGTTCGAAGAGAAGAAGTTTTCTTACATCCACGGGTAGCAACTTGATATACAAAGTGTTACAAGTGAATATCTCACTATCACACTAGTACGTCACTCAACAAATAGGATGTGACACCTAAAACTCTCCCAAATCCCGATAACTAAATCTGATATAACTAAATTTAATTCAAATAATTAAATCAAATCTAATCCAAAATCTAATTTAAATAACCAAATCCAAAGAGAGTGTAAAATTGGTATAAATCGGACCCAAGATTACAGAAACAGAAACAGGCCGTAAAGATTTATTTTACCGCGCTTCCCGTGTATTTAGCGCTGTGGGCTTCTTGGTTCCGCCCTTCAACACAGATTTCACTCACCATCTTGCTGTCTTTCTAGTTTTTACTTTGCAAGGGTTTCTCGCCCATGGCGTCCTCCGCTTCTTCCTCGTCTCATGGCGCTTCCAAGTTCCTTGGCGACCTTCCTTCCCGTGGCTACTTTTCGTCTTCCGTCCCCTCCTCAAATCCTGTAATGTTTCTTCTCAAATCTCACTGTTCTTTTAAATCTTACTCTTCCATATTCGCTCTGTTTGAATTTTGTATATTTTTCCATCATTTTCACATCCACATTAGGAAAAAAAAATTCACTTAGCGAGGAATTATGTATAGTTCGATCAATCACTTGACTTCATTAGGGCCTGAAGCCATGGAAATTATAATAATGCATTTGAGTCTGCTAGCACGTTTACGAGGGAGTTGAGTTCATCATACGTTTTTAAGTTGTAAGAGAATGCTTTAACCTTCTCTCGTGCTTAAAAGGATGCTGTTGTTTTACTCTCATTTCGTAAGATTCCAAATTCTTAGTGATCAAGGACCTGTTCTTTATAGGTATGCGAACTTATATAAATTGTGACAAAGAGGTGTAATTTGAATTTTTCTGGCTAGGTTTTTGCTAGGATGCCGTTATTCTTTTGCATCTATTATTTATGTGTTTTGTTAGATCGGATGATACGAATGTTTGAGTAATTGAGTTGGTTATCACTTTAGTGTGAATTAAAGGATGTATGCGTGTTATTATGTTGGAAGATTTATAACCACATTGTAGTATGAAGGTATTTTTTGGATTATCAATTTTGAGAATTCAGTCCTAGTTTTTTCCCTTGCGATGGCTCATATGGTCATTTACAAGCATTTATCGTGGTTATTGTCCATATTGAAAGGATTTTTTTTTTCTTTCTAAATATGTTCATGCAGGGAAGTATGCGAGTCTATATCTGCCTTCATGATACCTCACCACCAGGTTATCTTTTATTTCTCTGAATGTTCATTTTATTTACCCCTAAGCAACCGTTTAAATACATAAGGCTGTAGGTGTACCATGAAGCAACACTTTAATCATGTAAGATTGTAGGTTATGCAGTTTGAGAACTGTTATTCACCAGATATTTGATTGACATGAAAATTGATAAAGAAAGGAGAATCTGATTTTGGCAATTTACATGTGTTTTGAATGTATGTGGAGAAACCAACAAATAGTCATTGTTGACATTACTGTCACGCTATCAGGAATGATATCTGAGATTCATCCATCATCCTACCGAATAGTTCTTGCTGAAACACGTCAGAAACTGGACTTATCATTCACCGATGCACTGACCACTATGTTGAGGATTGTTTGGAGAGAGTCCCACATTGGCTAATTTAGGGAATGATCATGGGTTTATAATTTAAGGAATACATCTCCATTGGTATGACACCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGTTTATGCTCAAAGTGGACAATATCATACCATTGTGGAAATCTGTGGTTCCTAATACACACTGTGTTACTTTCTGCCATGTTATGTATTTTGAACACAGCAAAAACTAATAAATATTTACACCCATTTTGTTGCATCCAGAGGACCAAGAAATAAAGACTAACCAGCAGAATATACTTATTCGATCTTTGATGCTTAAAAATTCCAGCTCAAAGGATGGAAAGGGAGTAGCTGCAGCCGAATCCTCTCGAAAGAGGTACCATCATGTCATTATCTTTCTTAGAAAATAAAAGGCTGGTCTTCTAAGGTGGCTAGTTAGCCAAGTTTTGTTGAAACTATCGGATTTTGCTGCATTTTCTTAAGTGGCACTTGAAGCTAACAATTGATTGTCGTTTGTTATCGCATTGCTCATAAAATATATCATTTTCATTTCTTAACACATGGTGCACGTACCATATAGCATATAACTTTGGTTTTAGAATCTACATAATATTGAGTCTTAATTATGCTATCCTTATCTTTCCAGGGCTGGTGAAAAAATTTCAGATGGCAGAGCAAAGAGGACTGCCCAAGTAAGTTCAGGAAAAGGTAAGTTTTTGTTGATCATGTATACAGAAAGTAAGTAGGGCATGTTGACTGGCTCGTTACTCATTGCAAATGTTCTTCAAAAGAGTTTAACTAAATCCTGCCTTCGTTTCTCCTTGAGCATTGTGCAGACAGACATTAATGTAGTCTTAATCATAATTCATGAAAGTTCAATCAGCATCACCATTTCTTGTTAGCATCAATCTCTTGTGGTGCTCTTGTTTGTTCTTTTTGTTTTTTAAAATTATTTTCTTGTATAATCCAATTATTTTTCTTAGTATTTTATAGAGGAAAATTATGTGACCCATGTGCTGACCCCTCAAGAGTGAAGGAACAAAAAAGTATCAACCTAGCGGGGTGGTGCCCTTTCTCTTTAATATGAAGAACAAGTGAACGACCACTATCTATTATATGCAAAAAAACAATAAATCAATGCATATTATACATTGTGGTTCTACATTTTGAAAGGCCCCAACCCTTAAAGAACCCTGCATTTCATACTTTGGTGTTTAACGTCTAGAAATATGTCGAGCAGTTCAATTTGTTAGTAGGATATATCTGAAAATTGAAACAGAAAGGACCAGTCAGGGGAGGATGCGTTTTACCTTTTTACCTTTTTTCTTTCAATGATTAGTTTATAGTTTCATTAGAATTGTGTTCCAAATCTGATGATTATGGTAGCTACAATAATGCATCCAGGAGCATCAAACAGTGAAACACCGAGTAAGGATTTCCAGAATTTGACTGTAGAGAGGCTGCGTGCGCTTCTCAAGGCCAGAGGCCTTTCGCTCAAAGGAAAGAAGGCAAGTATATTATATTGTAATCAATGTGGAGTAGAGTAGCTGAATAAGTCTTATTGATCGTTGTGTTTGAGGATTGAGATGAATGCAACTGCTTTCTCTGTGGATTATCCTTTTCATATTTTTCGATCGGCTTGGTGCAGGATGAATTAATTGCCCGCCTTAGAAGCGCTGATGGTTAGACGACCACTATGGGAGTGAAACACGTGCTCCTCTACATGAACAACATGAGCAGCAAGGAAAGCAACCCGAGAGAGAAAGTTAAGGATGACTGTTTCCTCAACATTTAAATAGGAGTAGGGTAGAGTTGAAGTTGAACTGATGATGGTTCTTGAGAAATTAGTCATGAGTATCTGCATTCATTCATTTTGATTGAGGGAAAAAAAAAACAAAACATTGACAGTTAAAATATAGAGATAAAAGTAAGAGCGTGTATTTTTTTGTTTACTCTGATTTCCAGCAAAGCTTATGACATAGAAAATTGACCCTTCTGAATCATATTTGAAATCTGCAAGCTCTTTATCATATTTTTCAACTTAATGATCAAATTTTAGATTAAAGAGCTGTTTTATTG ATGTTTACTGCTAACCACTGCTGTGGGCGATGCTACCGTGCGCTGGACCGCACTTTCCGGCCTGCTTTGTGGCACCATTTCATAGGCTCTTCTCCTGCTACCGTGGCGGCCATAGCCTCAATTTTCGTCATCTCTTATGAATATTCTGGTTTGACCATTGATTCCCATTATATTATCAATTGTAGTGCAACAGCTTTTAAAGGTTTCTCGCCCATGGCGTCCTCCGCTTCTTCCTCGTCTCATGGCGCTTCCAAGTTCCTTGGCGACCTTCCTTCCCGTGGCTACTTTTCGTCTTCCGTCCCCTCCTCAAATCCTGGAAGTATGCGAGTCTATATCTGCCTTCATGATACCTCACCACCAGAGGACCAAGAAATAAAGACTAACCAGCAGAATATACTTATTCGATCTTTGATGCTTAAAAATTCCAGCTCAAAGGATGGAAAGGGAGTAGCTGCAGCCGAATCCTCTCGAAAGAGGGCTGGTGAAAAAATTTCAGATGGCAGAGCAAAGAGGACTGCCCAAGTAAGTTCAGGAAAAGGAGCATCAAACAGTGAAACACCGAGTAAGGATTTCCAGAATTTGACTGTAGAGAGGCTGCGTGCGCTTCTCAAGGCCAGAGGCCTTTCGCTCAAAGGAAAGAAGGCAAGTATATTATATTGTAATCAATGTGGAGATGAATTAATTGCCCGCCTTAGAAGCGCTGATGGTTAGACGACCACTATGGGAGTGAAACACGTGCTCCTCTACATGAACAACATGAGCAGCAAGGAAAGCAACCCGAGAGAGAAAGTTAAGGATGACTGTTTCCTCAACATTTAAATAGGAGTAGGGTAGAGTTGAAGTTGAACTGATGATGGTTCTTGAGAAATTAGTCATGAGTATCTGCATTCATTCATTTTGATTGAGGGAAAAAAAAAACAAAACATTGACAGTTAAAATATAGAGATAAAAGTAAGAGCGTGTATTTTTTTGTTTACTCTGATTTCCAGCAAAGCTTATGACATAGAAAATTGACCCTTCTGAATCATATTTGAAATCTGCAAGCTCTTTATCATATTTTTCAACTTAATGATCAAATTTTAGATTAAAGAGCTGTTTTATTG ATGTTTACTGCTAACCACTGCTGTGGGCGATGCTACCGTGCGCTGGACCGCACTTTCCGGCCTGCTTTGTGGCACCATTTCATAGGCTCTTCTCCTGCTACCGTGGCGGCCATAGCCTCAATTTTCGTCATCTCTTATGAATATTCTGGTTTGACCATTGATTCCCATTATATTATCAATTGTAGTGCAACAGCTTTTAAAGGTTTCTCGCCCATGGCGTCCTCCGCTTCTTCCTCGTCTCATGGCGCTTCCAAGTTCCTTGGCGACCTTCCTTCCCGTGGCTACTTTTCGTCTTCCGTCCCCTCCTCAAATCCTGGAAGTATGCGAGTCTATATCTGCCTTCATGATACCTCACCACCAGAGGACCAAGAAATAAAGACTAACCAGCAGAATATACTTATTCGATCTTTGATGCTTAAAAATTCCAGCTCAAAGGATGGAAAGGGAGTAGCTGCAGCCGAATCCTCTCGAAAGAGGGCTGGTGAAAAAATTTCAGATGGCAGAGCAAAGAGGACTGCCCAAGTAAGTTCAGGAAAAGGAGCATCAAACAGTGAAACACCGAGTAAGGATTTCCAGAATTTGACTGTAGAGAGGCTGCGTGCGCTTCTCAAGGCCAGAGGCCTTTCGCTCAAAGGAAAGAAGGCAAGTATATTATATTGTAATCAATGTGGAGATGAATTAATTGCCCGCCTTAGAAGCGCTGATGGTTAG MFTANHCCGRCYRALDRTFRPALWHHFIGSSPATVAAIASIFVISYEYSGLTIDSHYIINCSATAFKGFSPMASSASSSSHGASKFLGDLPSRGYFSSSVPSSNPGSMRVYICLHDTSPPEDQEIKTNQQNILIRSLMLKNSSSKDGKGVAAAESSRKRAGEKISDGRAKRTAQVSSGKGASNSETPSKDFQNLTVERLRALLKARGLSLKGKKASILYCNQCGDELIARLRSADG
BLAST of CmaCh11G000370 vs. TrEMBL
Match: A0A0A0LNX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002080 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.8e-63 Identity = 137/165 (83.03%), Postives = 146/165 (88.48%), Query Frame = 1
BLAST of CmaCh11G000370 vs. TrEMBL
Match: M5WNP7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012475mg PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.5e-38 Identity = 104/176 (59.09%), Postives = 125/176 (71.02%), Query Frame = 1
BLAST of CmaCh11G000370 vs. TrEMBL
Match: W9RY69_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005503 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 5.2e-36 Identity = 100/158 (63.29%), Postives = 118/158 (74.68%), Query Frame = 1
BLAST of CmaCh11G000370 vs. TrEMBL
Match: A0A068V2H7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042537001 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.6e-35 Identity = 95/155 (61.29%), Postives = 114/155 (73.55%), Query Frame = 1
BLAST of CmaCh11G000370 vs. TrEMBL
Match: V4MJM3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10005047mg PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.3e-35 Identity = 100/167 (59.88%), Postives = 121/167 (72.46%), Query Frame = 1
BLAST of CmaCh11G000370 vs. TAIR10
Match: AT5G63460.4 (AT5G63460.4 SAP domain-containing protein) HSP 1 Score: 141.4 bits (355), Expect = 7.4e-34 Identity = 97/178 (54.49%), Postives = 116/178 (65.17%), Query Frame = 1
BLAST of CmaCh11G000370 vs. NCBI nr
Match: gi|659128928|ref|XP_008464442.1| (PREDICTED: uncharacterized protein LOC103502327 [Cucumis melo]) HSP 1 Score: 252.3 bits (643), Expect = 8.4e-64 Identity = 139/165 (84.24%), Postives = 147/165 (89.09%), Query Frame = 1
BLAST of CmaCh11G000370 vs. NCBI nr
Match: gi|449440560|ref|XP_004138052.1| (PREDICTED: uncharacterized protein LOC101215024 [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 5.4e-63 Identity = 137/165 (83.03%), Postives = 146/165 (88.48%), Query Frame = 1
BLAST of CmaCh11G000370 vs. NCBI nr
Match: gi|645268292|ref|XP_008239460.1| (PREDICTED: uncharacterized protein LOC103338055 [Prunus mume]) HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38 Identity = 105/176 (59.66%), Postives = 125/176 (71.02%), Query Frame = 1
BLAST of CmaCh11G000370 vs. NCBI nr
Match: gi|802647530|ref|XP_012079846.1| (PREDICTED: uncharacterized protein LOC105640205 [Jatropha curcas]) HSP 1 Score: 167.2 bits (422), Expect = 3.5e-38 Identity = 102/180 (56.67%), Postives = 126/180 (70.00%), Query Frame = 1
BLAST of CmaCh11G000370 vs. NCBI nr
Match: gi|1009130254|ref|XP_015882197.1| (PREDICTED: uncharacterized protein LOC107418040 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 166.0 bits (419), Expect = 7.9e-38 Identity = 101/174 (58.05%), Postives = 127/174 (72.99%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |