CSPI01G00590 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAAACTTGAGATAAAATTTTGAGGTGCGTTCGTCACGCACACAAAGAGGCCGCAAAGATTTTACCACGCTTGGAATGTTTCCACTCCCGTGAATTTAGCGTAGTGGGTTTTTTCTCTATCATTCGGATTTGACTGATCATCTTTCTCTCTTGTTCTTTGCGAGGGTTTCTCGCCATGGCGCCTTCCTCTTCTTCTTCTGGTCATGGCGCTTCCAAGTTCCTTGGCGACCTTCCTTCCCGTGGCTTCTTCTCTTCCACCGTTCCCTCCTCAAATCCGGTAATGTTTCTTCTACTCTTCTTTGAAATATTGCTCTTTTCTATGATTTTGTGTATTTTCTCACATTTGTATACATTTACTTTAGTAAAATTCCATTTAGTGATCAATTATGTACAGTTTAATCAATCACTTTGATCCGAAGACATGGGAATTTTACATCTTTGTGTTTTGTAACACAATGCATTTGAGTCTCAGCATTTAAGACTTAAGAGGGGTTGAATCTCTCTTCGTTTTAGAATTATTCAAAAGAATGCTTTAAGGGATTCTGCTGCGTTCCTCCCTACTGTCATTTTTTAGGCTTAAATAATATTAGCAATCAAAGACCAACCAGTTGTTTACAGGTATAAAAGCTTGGTAATTTGAGTTTTCCGATGGCTAGGTTTTGTGATAATGCATTTCGGTGGTCTGAGTGTTTGAGTTATTGAGTTCGTTATCACTCTAGTTTGAAGTATAAGAACTTGGTAATTCGAGTTTTCATATGGCTAGGTTTTGCAATGATGCATTTGGGTGATCCGAGTGTTTGAGCTGTTGAGTTCGTTATCACTTTAGTCTGAATCATTGAACTTATCATCTTTGCTGAGAAATCAATGAAGTTTCTTTCTTTTTCTAGTTCTTTTTCTTTGGCATTTATAGTCATTTGTGTGTATTTATCGAGATTATTATCTATATTGAAACAATATGTTTTTCAATATGTTCTTCAATATGAACATGCAGGGAAGTATGCGGGTGTACATCTGCCTTCATGACACTGCACCGCCAGGTGATCTTTTTGTTTCTCTACATGATTATTTTACTAAACATAAAGCAACAGTTTAAGTTCATAAGACAGTGGACATGCCATGAAGCAGCACTGTAAGTATGTAAGACTGAACCATTGTTCACTAGATATTTGGTTTACAGAAGAAATGAGAAAGGATAATCATAGTGCTCGTGCAGAGCTCTATAAATGTTTGAAACCAAAAGTTCATTTTGTATAATTAAGGTTGCTGATTGGTTATTTTATAGATTTTGTGAACTGTACACTGTGAGATCAAACGATATTTGTGGGATGTGTAATGTGTTATGGTCACATTATCAGGAATGAGATCTGAGATTCATATTGAATCATGATTCTACTGAATAATTCTTGCTACTCTTTGGAAGAGCCAAATGCACCAACCACCTTGCCATTATATGTTTATTTTCCCCTCTTCTTCTTATTTTAAGTTACCTATTATGAACACATAAAAGATTGATAAATGTTTATCCCCATCTTCCATCCAGAGGATCAAGAAATCAAGACAAACCAGCAGAATATACTAATTAGATCTTTAATGCTTAAAAATTCCAGCTCGAAGGATGGAAAAGGAGTAGCTACAGCGGAGTCATCTCGAAAGAGGTACCATCATGACGGATGATCTTTTTAGATTGCTAGTTGGTCAATTTTTGTTTAAACTGTCAGATTTCGCTGCATCTTCTTGCGTATGTAGCACTGGATGCAAACAATGGATTGTTGTTTTGTTTCTTATAACATGATGCTTGTAGGCATATTCCTTTTTTTATCTTTGTTGGAATACATAATTTTGGTTTTGACTTCTATGTAATATTAAGTCTCAGTTATGGTACCCTGATATTTCCAGGGCTGGGGAAAAAATTTCAGATAGCAGAGCAAAGAAGGCCGCACAAGTATGTTCATCCAAAGGTAAGTTCTGCTCGATCATGTATTCTGAGGATAAATTGGTTGACTGACCCTTACTCCTTGCATATGTTCTTCACTAGAGTTGAAATTCAATGTCTGTGCAGCGGGTTATTAATGCAGTCTTGGGGCATTTATTTTCCCCCATTATTTTTCTTAGTCATCATATTTATATATTTGGTTAGAAACCTAACTAAGAATATGAGGTCGTTGGAGAAAACAATCCTCCAGAAACAGGAGTTTCACACTAACAACAAAAACAACTCCAGTCCAAAAGAACGAGAACAATGTCATAAGATTACAGTACGGTCTAATGATTGACGCCCTAACAGAAATATTAAACTTCCTTCTTAGATTTCTCAACATCCCTGCATCTATTTTCTTAGGCATTATATAGATCAGGTGCTTTCCTGGGATCTTAAATTAATTGTGGATAAAAAAAATGTTGCCCAGTATGTTGTCTAAACAAGAATGAAAGAACAAAAATTGGGGATTACCTAGAATAACAGCAGCCTACAATGTTATAGATTGTGGTTGTAAACAACCTTTTACGTGGTATAGATAATGGTTGTGTTCTTCAAATTAACAAGAAAAATCTTACCCCTTAAAGAACCCAGTGCATCATACTTTCTTTAGCGGTTAATGTCTAGAAATACGCCCAACAGTTAAATTAGTTATCGTATATTTGCAAATTAAAACACAGGCCATTCAGGGAGGATGTTTTTTAACTCTTTATTCTCTAATCGATTTATGTTTTCATGTCCAAATCTGATTATTATATGGTTGCTATCATTCATCCAGGAGCATCAAACAATGAAACACCAACTAAGGATCTACAGAATTTGACTGTAGAGAGGCTGCGTGCCCTTCTCAAGGCTAAAGGCCTCTCGCTCAGAGGAAAGAAGGCAAGTATATTCTATTGTGTAACCAATCTTGTTGAATAAGTAAATGGATGCAAGTAATTTTTAAATGGTTAAAATCACTTTTGTTCTATATTCAATATCACTTCCAACCATGCTCCAAACTGGTGTTTGAGGATTTTTTGACCAATCTGGTGCAGGATGAATTAATTGCCCGTTTGAGAAGCGCGGATGGTTAGACAATGACTGCTAAAGGAGTGAAACATCTGTCAGCTGCAAATCTTCATCGGCATAATTAGGCAAATGAAACCGAGGAAGTTGTGGATTACTGTTTTCTCAACATTTAAATGTGTAGTTAGGAGTAGTTTGGGTGTACTTAGAATTTGCACCAATGGTGGTTTTTGGAAAACCAAAGCGCTGATCCATTAATATCTGTATTCATTTTGATGATGGGAACAAAGCGTTCATAGTTATAAATTACAGAGATGAATTAAGGTGTGTTTTTCTCACTTTCTTTGTTTAAATCTTCTCTATTTGAAATTCTCCTATGGTTTTGAG ATGGCGCCTTCCTCTTCTTCTTCTGGTCATGGCGCTTCCAAGTTCCTTGGCGACCTTCCTTCCCGTGGCTTCTTCTCTTCCACCGTTCCCTCCTCAAATCCGGGAAGTATGCGGGTGTACATCTGCCTTCATGACACTGCACCGCCAGAGGATCAAGAAATCAAGACAAACCAGCAGAATATACTAATTAGATCTTTAATGCTTAAAAATTCCAGCTCGAAGGATGGAAAAGGAGTAGCTACAGCGGAGTCATCTCGAAAGAGGGCTGGGGAAAAAATTTCAGATAGCAGAGCAAAGAAGGCCGCACAAGTATGTTCATCCAAAGGAGCATCAAACAATGAAACACCAACTAAGGATCTACAGAATTTGACTGTAGAGAGGCTGCGTGCCCTTCTCAAGGCTAAAGGCCTCTCGCTCAGAGGAAAGAAGGATGAATTAATTGCCCGTTTGAGAAGCGCGGATGGTTAG ATGGCGCCTTCCTCTTCTTCTTCTGGTCATGGCGCTTCCAAGTTCCTTGGCGACCTTCCTTCCCGTGGCTTCTTCTCTTCCACCGTTCCCTCCTCAAATCCGGGAAGTATGCGGGTGTACATCTGCCTTCATGACACTGCACCGCCAGAGGATCAAGAAATCAAGACAAACCAGCAGAATATACTAATTAGATCTTTAATGCTTAAAAATTCCAGCTCGAAGGATGGAAAAGGAGTAGCTACAGCGGAGTCATCTCGAAAGAGGGCTGGGGAAAAAATTTCAGATAGCAGAGCAAAGAAGGCCGCACAAGTATGTTCATCCAAAGGAGCATCAAACAATGAAACACCAACTAAGGATCTACAGAATTTGACTGTAGAGAGGCTGCGTGCCCTTCTCAAGGCTAAAGGCCTCTCGCTCAGAGGAAAGAAGGATGAATTAATTGCCCGTTTGAGAAGCGCGGATGGTTAG
BLAST of CSPI01G00590 vs. TrEMBL
Match: A0A0A0LNX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002080 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 8.3e-75 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 1
BLAST of CSPI01G00590 vs. TrEMBL
Match: M5WNP7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012475mg PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.7e-40 Identity = 101/157 (64.33%), Postives = 120/157 (76.43%), Query Frame = 1
BLAST of CSPI01G00590 vs. TrEMBL
Match: M1B895_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015243 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37 Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 1
BLAST of CSPI01G00590 vs. TrEMBL
Match: A0A0V0HCZ0_SOLCH (Putative apoptotic chromatin condensation inducer in the nucleus-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.8e-37 Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 1
BLAST of CSPI01G00590 vs. TrEMBL
Match: K4BJZ0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 4.0e-37 Identity = 98/160 (61.25%), Postives = 122/160 (76.25%), Query Frame = 1
BLAST of CSPI01G00590 vs. TAIR10
Match: AT5G63460.4 (AT5G63460.4 SAP domain-containing protein) HSP 1 Score: 147.9 bits (372), Expect = 5.2e-36 Identity = 96/168 (57.14%), Postives = 115/168 (68.45%), Query Frame = 1
BLAST of CSPI01G00590 vs. NCBI nr
Match: gi|449440560|ref|XP_004138052.1| (PREDICTED: uncharacterized protein LOC101215024 [Cucumis sativus]) HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 1
BLAST of CSPI01G00590 vs. NCBI nr
Match: gi|659128928|ref|XP_008464442.1| (PREDICTED: uncharacterized protein LOC103502327 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 1.2e-74 Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of CSPI01G00590 vs. NCBI nr
Match: gi|595849364|ref|XP_007209709.1| (hypothetical protein PRUPE_ppa012475mg [Prunus persica]) HSP 1 Score: 171.4 bits (433), Expect = 1.2e-39 Identity = 101/157 (64.33%), Postives = 120/157 (76.43%), Query Frame = 1
BLAST of CSPI01G00590 vs. NCBI nr
Match: gi|645268292|ref|XP_008239460.1| (PREDICTED: uncharacterized protein LOC103338055 [Prunus mume]) HSP 1 Score: 171.0 bits (432), Expect = 1.6e-39 Identity = 100/157 (63.69%), Postives = 120/157 (76.43%), Query Frame = 1
BLAST of CSPI01G00590 vs. NCBI nr
Match: gi|1009130254|ref|XP_015882197.1| (PREDICTED: uncharacterized protein LOC107418040 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 170.2 bits (430), Expect = 2.8e-39 Identity = 98/158 (62.03%), Postives = 122/158 (77.22%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |