CmaCh10G000360 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G000360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr10 : 133089 .. 134293 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCCCTCTCTGTGCACTGCAAGCTTAATCCGGCTTTAATGGGCTGTGGAAACTCCAAGCTTACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACCAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTGAGAGATACAGCGCTGTCAAAGAAAGTGCTTCTCACAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTGCTGTTCATAACAGGAACTGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTACACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCCCTTGGAACAACACAAACCCAATGACAATGGCACTCGGGTTAAATTGAAAGAAGATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAGCAAGGGAGAAGGAGAAGAGGGTAGGCCTGACAACGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAGCAAACACCAAATGAGAAACAAAATGGTAAGTAGGCTCAAAACAAAACTTTCAACCCAAACAACCAAATCATTGTGTGTATATTATGACCAACACAGTAGCAGCATGTTGTACAGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCAGTAGTACAAAATCTAACGAGGTGGGTCCACAGGACCGTGTTTAGAAGATTTGGGATTTTTGTTGTGTTCCTCTCATTCTCATTCATCGACTTCATTTGATTTCTTATGAATCTTTCACGTACAGTGCCAGGAGAAGAAGACGATAAAGAAAGGGAAAAAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGGTTTAAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGCTGTACCGGCAATGACAGAGGCAATCATCTACCTATAAAAGCTGAATCTTAAGAGTATCCATTTCAAGGGGTTGGGGAAGGGAGGCTTCCTGCTCATTTTTTAGGCCATTATCCCCCAAATGTTCCGTCTCCCCAATGTCAGTAATCAAACCCACCATACGTTTTACTTACGATCATGTAATACCAATTCATTCCCCCTCTAATGTTATTCCACAACC

mRNA sequence

CTCTCCCTCTCTGTGCACTGCAAGCTTAATCCGGCTTTAATGGGCTGTGGAAACTCCAAGCTTACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACCAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTGAGAGATACAGCGCTGTCAAAGAAAGTGCTTCTCACAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTGCTGTTCATAACAGGAACTGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTACACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCCCTTGGAACAACACAAACCCAATGACAATGGCACTCGGGTTAAATTGAAAGAAGATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAGCAAGGGAGAAGGAGAAGAGGGTAGGCCTGACAACGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAGCAAACACCAAATGAGAAACAAAATGCATGTTGTACAGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCAGTAGTACAAAATCTAACGAGTGCCAGGAGAAGAAGACGATAAAGAAAGGGAAAAAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGGTTTAAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGCTGTACCGGCAATGACAGAGGCAATCATCTACCTATAAAAGCTGAATCTTAAGAGTATCCATTTCAAGGGGTTGGGGAAGGGAGGCTTCCTGCTCATTTTTTAGGCCATTATCCCCCAAATGTTCCGTCTCCCCAATGTCAGTAATCAAACCCACCATACGTTTTACTTACGATCATGTAATACCAATTCATTCCCCCTCTAATGTTATTCCACAACC

Coding sequence (CDS)

ATGGGCTGTGGAAACTCCAAGCTTACTCCGGAAGGAGAGTCGATTCTCCCCATGATTCGCCCACTTCTTTTCCGCACCAAATTTGCGGAGTTCAGGAAACGTAAGAATGGAACGCATCTGAGAGATACAGCGCTGTCAAAGAAAGTGCTTCTCACAGAGGGAGAAATAGAAGAAGAGAACTCCATACTTGCTGTTCATAACAGGAACTGCATCTATGGTTCCCATGACGGCAAAACAATTTGTTTACACACCAAACAGGAGAATCATAAGGATGAACATGATTCACCCAATGCAAACCATCCCTTGGAACAACACAAACCCAATGACAATGGCACTCGGGTTAAATTGAAAGAAGATAAAACCATGAACAACCAACATAAGGCAGTGGAAGAAGGAGATGATGAAAGCAAGGGAGAAGGAGAAGAGGGTAGGCCTGACAACGAAGACAATCGATGCCTCATCTGTCCTGGATCACCCAGTTTCAGAGTTTATTTTGTTGAGCAAACACCAAATGAGAAACAAAATGCATGTTGTACAGTTGAAATGAATGATGATGGAGACATGGAAGATGCCTCACTGAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCAGTAGTACAAAATCTAACGAGTGCCAGGAGAAGAAGACGATAAAGAAAGGGAAAAAAGGGACGACTTTGAACAGAGCGGGGAGTAGAAAAAGACCAGTTGGAGTTGGTTTAAAGAGTCTGTTGAACGTTAATAATTGTTGCTATCATTTAAGCTGTACCGGCAATGACAGAGGCAATCATCTACCTATAAAAGCTGAATCTTAA

Protein sequence

MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEENSILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAES

Homology

[Close]

BLAST of CmaCh10G000360 vs. TrEMBL
Match: A0A0A0LNT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000760 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.0e-64
Identity = 160/304 (52.63%), Postives = 196/304 (64.47%), Query Frame = 1


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60
           MGCGNSKL P GE + P IRPL  R K  E RKRKNGTHLRD ALSKKVLL +GE EEEN
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  SILAVHNRNCIYGSHDGKTICLH----------TKQENHKDEHDSPN------------A 120
           ++   +   C      G T CL           TK E++      P+            +
Sbjct: 61  AMHVDNRHEC------GSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQS 120

Query: 121 NHPLEQH-KPN--------DNGTRVKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDNED 180
           NH LE+  +P+        D+   ++LK+DKTMN +HK ++EGD+ +K EGE+GRPDNE+
Sbjct: 121 NHILEEEPQPHIQLKATHPDDTPVLELKQDKTMN-EHKCIQEGDENNKKEGEDGRPDNEE 180

Query: 181 NR-CLICPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVESTSST 240
           NR   ICPGSPSFR+YFVE+T ++K+     VEM D   M D S KKSPSRDSVEST+S 
Sbjct: 181 NRGSFICPGSPSFRLYFVEETQDDKEK----VEMKDASGMGDVSHKKSPSRDSVESTTSA 240

Query: 241 KSNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPI 273
           K +E QE K IKKGKK TT NR  S+KRPV VG+K+LLNV + CYHLSC+GNDR N L  
Sbjct: 241 KCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKS-CYHLSCSGNDRANLLAR 292

[Close]

BLAST of CmaCh10G000360 vs. TrEMBL
Match: W9R5I1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008832 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 98/295 (33.22%), Postives = 135/295 (45.76%), Query Frame = 1


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60
           MGC NSKL  +  +I P +RPLL+R K  E R+R++        LSKK LLT+G  EE +
Sbjct: 1   MGCQNSKLNRDILAIPPKLRPLLWR-KVEELRRRRSAATANGGTLSKKELLTDGVREESD 60

Query: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHP----LEQHKPNDNGTRVKL 120
           +    H        H+       T    H  E  S +A+ P     E+ K   +   +  
Sbjct: 61  AFSRDHE-----SLHENYERNDTTSSPGH--ESVSSSASQPKTIITEEDKKKTSEEEIVE 120

Query: 121 KEDKTMNNQHKAVEEG--DDESKGEGEEGRPDNEDN--------RCLICPGSPSFRVYFV 180
            E   +N + +  E    DD+ + E EE + + ED+           ICP SPSFRVYF+
Sbjct: 121 PEKTEINMESENQERSGKDDKEEKEEEEAKEEKEDDLTEDEGDQEAKICPSSPSFRVYFI 180

Query: 181 EQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRD---------SVESTSSTKSNECQEKK 240
           E    E++      + +D+ D ED    K    D         SVES     ++E QE K
Sbjct: 181 ESLDQEEEEK----KDDDEPDHEDKDDSKENENDMQKEWNRENSVESVVLIDTHEDQETK 240

Query: 241 TIKK--GKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIKA 271
            +KK  GK      RA  R  PV V  K LLNV + CYH S   +DR + L  K+
Sbjct: 241 IVKKKSGKSRMRFRRALCRGGPVAV--KHLLNVRS-CYHPS---SDRASLLAKKS 277

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BLAST of CmaCh10G000360 vs. TrEMBL
Match: A0A151RRF6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_033325 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-12
Identity = 90/266 (33.83%), Postives = 127/266 (47.74%), Query Frame = 1


Query: 1   MGCGNSKLTP-EGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEE 60
           MG GNSKL   EGE + P IRP+L   K+ +F+KR N     +T LSKK LL E   E++
Sbjct: 1   MGIGNSKLNAAEGEVVPPKIRPMLV-FKYEDFKKRTNA----ETNLSKKKLLKEATEEDD 60

Query: 61  NSILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKED 120
           NS+        I  S + K   +     +   E      NHPL+QH  N      +  ED
Sbjct: 61  NSLE-------IQPSEEEKVSRVVPMANS---ECPILKDNHPLDQHNMNHAVLSAEAMED 120

Query: 121 KTMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQNACCT 180
                      +GDD    +      DN D+   ICPGSPSFR+Y ++    +      T
Sbjct: 121 A----------KGDDHDDNDHN----DNNDDGRNICPGSPSFRIYCIDNEECDNY-PTKT 180

Query: 181 VEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPVG 240
           V M+          ++S S DSVE  +ST+     E ++I      +T  R G++K+   
Sbjct: 181 VVMH----------QRSHSADSVERVASTEVLPEVETESI------STPKRKGNKKK--F 217

Query: 241 VGLKSLLNVNNCCYH--LSCTGNDRG 264
             +++LL V + CYH   +CTGNDRG
Sbjct: 241 GAMRTLLKVKS-CYHPIRNCTGNDRG 217

[Close]

BLAST of CmaCh10G000360 vs. TrEMBL
Match: M5W8K2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025874mg PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11
Identity = 100/301 (33.22%), Postives = 140/301 (46.51%), Query Frame = 1


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDT-ALSKKVLLTEGEIEEE 60
           MG  NSKLTPEGE++ P IR LL R KF E R R     L+ +   SKK LL +GE EE 
Sbjct: 1   MGGQNSKLTPEGEAVPPRIRSLLQR-KFEEIRGRTKAKKLKASHTFSKKQLLKDGEQEEV 60

Query: 61  NSILAVHNRNCIYGSHDGKTICLHTKQENHKDEH-DSPNANHPLE--QHKPNDNGTRVKL 120
           +  +                   H+ Q + + E+  SP     LE     P  +    + 
Sbjct: 61  DISVP------------------HSLQSSPEFENLPSPKTPQTLELLPRLPELDRRAKQS 120

Query: 121 KEDKTMNNQHKAVEEGDDESKG---------------EGEEGRPD-------NEDNRCLI 180
            ED+   +  +   E D E+KG               EGEE   D         +++  +
Sbjct: 121 DEDQIRRDGAEFSVEDDKEAKGVNVYIGGVFAMGETTEGEEEEEDEVNDAGMQRNSKIHL 180

Query: 181 CPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVEST-----SSTK 240
           CP SPSFRVY +E  P E +N     +  DD   ED   KKSPS +S +S+     S  +
Sbjct: 181 CPASPSFRVYCME--PLEIEND----DSKDDITDEDFKHKKSPSAESADSSVDSVRSMIE 240

Query: 241 SNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCT-GNDRGNHLPI 270
           +N+ Q+ KT +KG++   +  A    RP  V  K+LLNV   CY+  CT G+DR  ++  
Sbjct: 241 TNDVQDTKTKQKGRRRRRIKNA---LRPNTV--KNLLNVKG-CYYAGCTGGHDRTTYVAA 270

[Close]

BLAST of CmaCh10G000360 vs. TrEMBL
Match: G7J3B7_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g098800 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-11
Identity = 99/300 (33.00%), Postives = 141/300 (47.00%), Query Frame = 1


Query: 1   MGCGNSK-LTPEGESILPM-IRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEE 60
           MG  NS+ + P GE +LP  +RPLL R +  EFRKR+N    RD A+SKK LL +     
Sbjct: 1   MGGNNSRSVNPNGEDVLPARLRPLL-RQRIEEFRKRRNAR--RDGAVSKKELLKDDAGNN 60

Query: 61  ENSILAVHNRNCIYGSHDGKTICLHT-------------------KQENHKDEHDSPNAN 120
           ++    V+        H+ +   +H                    ++E HK   D     
Sbjct: 61  DDPSSNVNEVLEETQQHEEEKTTVHAVSVEKLSQVAPLPVSECGIEEEEHKGSKD----- 120

Query: 121 HPLEQHKPND-NGTRVKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDNEDN-RCLICPG 180
           H LE+ K  + N   VK+      N   ++ E+ DDE K E EE   ++E+    LI PG
Sbjct: 121 HDLEKCKEIERNVAEVKIAASLQENKYEESNEKHDDEDKKEEEEDEEEDENEIGRLIGPG 180

Query: 181 SPSFRVYFVEQTPNEKQNACCTVEMND--DGDMEDASL---KKSPSRDSVESTSS----- 240
           SPSFR+Y++E T   K+ A     +ND   G+ ED  +    KS S +S ES +S     
Sbjct: 181 SPSFRIYYIEAT-ERKEQALRDTRVNDKQQGEKEDEPIVVHYKSHSCESDESVTSESENT 240

Query: 241 TKSNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYH-----LSCTGNDR 263
             SNE  E +T  K KKG        ++R +    K+LLNV N   +     ++C GNDR
Sbjct: 241 DNSNEVVEIETAPK-KKG------HHKRRKLVAMKKNLLNVKNLQKNSMNKMMACAGNDR 284

[Close]

BLAST of CmaCh10G000360 vs. TAIR10
Match: AT5G50830.2 (AT5G50830.2 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 8.0e-08
Identity = 87/293 (29.69%), Postives = 130/293 (44.37%), Query Frame = 1


Query: 1   MGCGNSKL------TPEGESILPM---IRPLLFRTKFAEFRKRKNGTHLRDT-ALSKKVL 60
           MGCG S+L        E   ++P+   IRPLL R +  E +KR +   L+ +  LSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPLL-RRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LT-----EGEIEEEN--SILAV--------HN----RNCIYGSHDGKTICLHTKQENHKD 120
           L      +GE  EEN  S+ A         HN    +  IY     K      K+E   +
Sbjct: 61  LRHNSSEDGEDTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPSKDDVKEVKEEVVVN 120

Query: 121 EHDSPNANHPLEQHKPNDNGTRVKLKEDKTMNNQHKAV---EEGDDESKGEGEEGRPDNE 180
           + +  N +  + + +  +N   VK +E++  ++    +   +EGDD    + +EG  +N 
Sbjct: 121 KQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKKEGDDGKNHDVDEGSINNF 180

Query: 181 DNRCLICPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVESTSST 240
           D R +I PGSPSFRVY            C  V  +DD + +D       +R S+E+ S T
Sbjct: 181 DER-MIGPGSPSFRVY------------CVDVPSDDDDEEKDV----EDARKSMETESVT 240

Query: 241 KSNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCY-HLSCTGN 261
              +  +   +KK KK     R G     + +  K L NV   CY    C GN
Sbjct: 241 TEIKEVDGSIVKKEKKERRGKRFG-----IALPRKYLANVTAPCYAGGGCMGN 270

[Close]

BLAST of CmaCh10G000360 vs. NCBI nr
Match: gi|659128822|ref|XP_008464387.1| (PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 4.5e-69
Identity = 165/303 (54.46%), Postives = 195/303 (64.36%), Query Frame = 1


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60
           MGCGNSKL PEGE + P IRPLL R KF E RKRKNGTHLRD ALSKKVLL EGE EEEN
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  SILAVHNRNCIYGSHDGKTICL----HTKQENHKDEHDS----PNANHPLEQHKPNDNGT 120
           ++   +   C      G T CL    HT     KDEH+S    P +N+     K  +   
Sbjct: 67  AMFVDNRHEC------GSTKCLASQQHTINNATKDEHNSASTIPPSNNDANATKNGEQSN 126

Query: 121 RVKLKE----------------------DKTMNNQHKAVEEGDDESKGEGEEGRPDNEDN 180
           R+  +E                      DKTM N+HK ++EGD+ +K EGE+GRPDNE+N
Sbjct: 127 RILEEEPRPHIQLKTTHPDDTPVLELKQDKTM-NEHKCIQEGDENNKKEGEDGRPDNEEN 186

Query: 181 R-CLICPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVESTSSTK 240
           R  +ICPGSPSFR YFVE+T ++K+     VEM D G M D S KKSPS DSVEST+S K
Sbjct: 187 RGSIICPGSPSFRFYFVEETQDDKEK----VEMKDAGGMGDVSHKKSPSHDSVESTTSAK 246

Query: 241 SNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIK 273
           S E QE K IKKGKKGTT NR  S++RPV VG+K+LLNV + CYHLSC+GNDR N L  K
Sbjct: 247 SGEGQENKVIKKGKKGTTFNRVISKRRPVSVGVKNLLNVKS-CYHLSCSGNDRANLLARK 297

[Close]

BLAST of CmaCh10G000360 vs. NCBI nr
Match: gi|778655250|ref|XP_011649820.1| (PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 4.3e-64
Identity = 160/304 (52.63%), Postives = 196/304 (64.47%), Query Frame = 1


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60
           MGCGNSKL P GE + P IRPL  R K  E RKRKNGTHLRD ALSKKVLL +GE EEEN
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  SILAVHNRNCIYGSHDGKTICLH----------TKQENHKDEHDSPN------------A 120
           ++   +   C      G T CL           TK E++      P+            +
Sbjct: 61  AMHVDNRHEC------GSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQS 120

Query: 121 NHPLEQH-KPN--------DNGTRVKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDNED 180
           NH LE+  +P+        D+   ++LK+DKTMN +HK ++EGD+ +K EGE+GRPDNE+
Sbjct: 121 NHILEEEPQPHIQLKATHPDDTPVLELKQDKTMN-EHKCIQEGDENNKKEGEDGRPDNEE 180

Query: 181 NR-CLICPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVESTSST 240
           NR   ICPGSPSFR+YFVE+T ++K+     VEM D   M D S KKSPSRDSVEST+S 
Sbjct: 181 NRGSFICPGSPSFRLYFVEETQDDKEK----VEMKDASGMGDVSHKKSPSRDSVESTTSA 240

Query: 241 KSNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPI 273
           K +E QE K IKKGKK TT NR  S+KRPV VG+K+LLNV + CYHLSC+GNDR N L  
Sbjct: 241 KCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKS-CYHLSCSGNDRANLLAR 292

[Close]

BLAST of CmaCh10G000360 vs. NCBI nr
Match: gi|703089924|ref|XP_010093939.1| (hypothetical protein L484_008832 [Morus notabilis])

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 98/295 (33.22%), Postives = 135/295 (45.76%), Query Frame = 1


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60
           MGC NSKL  +  +I P +RPLL+R K  E R+R++        LSKK LLT+G  EE +
Sbjct: 1   MGCQNSKLNRDILAIPPKLRPLLWR-KVEELRRRRSAATANGGTLSKKELLTDGVREESD 60

Query: 61  SILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHP----LEQHKPNDNGTRVKL 120
           +    H        H+       T    H  E  S +A+ P     E+ K   +   +  
Sbjct: 61  AFSRDHE-----SLHENYERNDTTSSPGH--ESVSSSASQPKTIITEEDKKKTSEEEIVE 120

Query: 121 KEDKTMNNQHKAVEEG--DDESKGEGEEGRPDNEDN--------RCLICPGSPSFRVYFV 180
            E   +N + +  E    DD+ + E EE + + ED+           ICP SPSFRVYF+
Sbjct: 121 PEKTEINMESENQERSGKDDKEEKEEEEAKEEKEDDLTEDEGDQEAKICPSSPSFRVYFI 180

Query: 181 EQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRD---------SVESTSSTKSNECQEKK 240
           E    E++      + +D+ D ED    K    D         SVES     ++E QE K
Sbjct: 181 ESLDQEEEEK----KDDDEPDHEDKDDSKENENDMQKEWNRENSVESVVLIDTHEDQETK 240

Query: 241 TIKK--GKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIKA 271
            +KK  GK      RA  R  PV V  K LLNV + CYH S   +DR + L  K+
Sbjct: 241 IVKKKSGKSRMRFRRALCRGGPVAV--KHLLNVRS-CYHPS---SDRASLLAKKS 277

[Close]

BLAST of CmaCh10G000360 vs. NCBI nr
Match: gi|1012333738|gb|KYP45121.1| (hypothetical protein KK1_033325 [Cajanus cajan])

HSP 1 Score: 80.5 bits (197), Expect = 5.0e-12
Identity = 90/266 (33.83%), Postives = 127/266 (47.74%), Query Frame = 1


Query: 1   MGCGNSKLTP-EGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEE 60
           MG GNSKL   EGE + P IRP+L   K+ +F+KR N     +T LSKK LL E   E++
Sbjct: 1   MGIGNSKLNAAEGEVVPPKIRPMLV-FKYEDFKKRTNA----ETNLSKKKLLKEATEEDD 60

Query: 61  NSILAVHNRNCIYGSHDGKTICLHTKQENHKDEHDSPNANHPLEQHKPNDNGTRVKLKED 120
           NS+        I  S + K   +     +   E      NHPL+QH  N      +  ED
Sbjct: 61  NSLE-------IQPSEEEKVSRVVPMANS---ECPILKDNHPLDQHNMNHAVLSAEAMED 120

Query: 121 KTMNNQHKAVEEGDDESKGEGEEGRPDNEDNRCLICPGSPSFRVYFVEQTPNEKQNACCT 180
                      +GDD    +      DN D+   ICPGSPSFR+Y ++    +      T
Sbjct: 121 A----------KGDDHDDNDHN----DNNDDGRNICPGSPSFRIYCIDNEECDNY-PTKT 180

Query: 181 VEMNDDGDMEDASLKKSPSRDSVESTSSTKSNECQEKKTIKKGKKGTTLNRAGSRKRPVG 240
           V M+          ++S S DSVE  +ST+     E ++I      +T  R G++K+   
Sbjct: 181 VVMH----------QRSHSADSVERVASTEVLPEVETESI------STPKRKGNKKK--F 217

Query: 241 VGLKSLLNVNNCCYH--LSCTGNDRG 264
             +++LL V + CYH   +CTGNDRG
Sbjct: 241 GAMRTLLKVKS-CYHPIRNCTGNDRG 217

[Close]

BLAST of CmaCh10G000360 vs. NCBI nr
Match: gi|595845082|ref|XP_007208863.1| (hypothetical protein PRUPE_ppa025874mg [Prunus persica])

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 100/301 (33.22%), Postives = 140/301 (46.51%), Query Frame = 1


Query: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDT-ALSKKVLLTEGEIEEE 60
           MG  NSKLTPEGE++ P IR LL R KF E R R     L+ +   SKK LL +GE EE 
Sbjct: 1   MGGQNSKLTPEGEAVPPRIRSLLQR-KFEEIRGRTKAKKLKASHTFSKKQLLKDGEQEEV 60

Query: 61  NSILAVHNRNCIYGSHDGKTICLHTKQENHKDEH-DSPNANHPLE--QHKPNDNGTRVKL 120
           +  +                   H+ Q + + E+  SP     LE     P  +    + 
Sbjct: 61  DISVP------------------HSLQSSPEFENLPSPKTPQTLELLPRLPELDRRAKQS 120

Query: 121 KEDKTMNNQHKAVEEGDDESKG---------------EGEEGRPD-------NEDNRCLI 180
            ED+   +  +   E D E+KG               EGEE   D         +++  +
Sbjct: 121 DEDQIRRDGAEFSVEDDKEAKGVNVYIGGVFAMGETTEGEEEEEDEVNDAGMQRNSKIHL 180

Query: 181 CPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVEST-----SSTK 240
           CP SPSFRVY +E  P E +N     +  DD   ED   KKSPS +S +S+     S  +
Sbjct: 181 CPASPSFRVYCME--PLEIEND----DSKDDITDEDFKHKKSPSAESADSSVDSVRSMIE 240

Query: 241 SNECQEKKTIKKGKKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCT-GNDRGNHLPI 270
           +N+ Q+ KT +KG++   +  A    RP  V  K+LLNV   CY+  CT G+DR  ++  
Sbjct: 241 TNDVQDTKTKQKGRRRRRIKNA---LRPNTV--KNLLNVKG-CYYAGCTGGHDRTTYVAA 270

The following BLAST results are available for this feature:

BLAST of CmaCh10G000360 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh10G000360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNT2_CUCSA	3.0e-64	52.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000760 PE=4 SV=1	[more]
W9R5I1_9ROSA	1.1e-13	33.22	Uncharacterized protein OS=Morus notabilis GN=L484_008832 PE=4 SV=1	[more]
A0A151RRF6_CAJCA	3.5e-12	33.83	Uncharacterized protein OS=Cajanus cajan GN=KK1_033325 PE=4 SV=1	[more]
M5W8K2_PRUPE	1.0e-11	33.22	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025874mg PE=4 SV=1	[more]
G7J3B7_MEDTR	2.3e-11	33.00	Uncharacterized protein OS=Medicago truncatula GN=MTR_3g098800 PE=4 SV=1	[more]

BLAST of CmaCh10G000360 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50830.2	8.0e-08	29.69	unknown protein	[more]

BLAST of CmaCh10G000360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128822\|ref\|XP_008464387.1\|	4.5e-69	54.46	PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis melo]	[more]
gi\|778655250\|ref\|XP_011649820.1\|	4.3e-64	52.63	PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis sativus...	[more]
gi\|703089924\|ref\|XP_010093939.1\|	1.6e-13	33.22	hypothetical protein L484_008832 [Morus notabilis]	[more]
gi\|1012333738\|gb\|KYP45121.1\|	5.0e-12	33.83	hypothetical protein KK1_033325 [Cajanus cajan]	[more]
gi\|595845082\|ref\|XP_007208863.1\|	1.5e-11	33.22	hypothetical protein PRUPE_ppa025874mg [Prunus persica]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000360.1	CmaCh10G000360.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh10G000360	Cucsa.157070	Cucumber (Gy14) v1	cgycmaB0433
CmaCh10G000360	Cla019305	Watermelon (97103) v1	cmawmB072
CmaCh10G000360	Csa1G000760	Cucumber (Chinese Long) v2	cmacuB048
CmaCh10G000360	MELO3C026179	Melon (DHL92) v3.5.1	cmameB065
CmaCh10G000360	ClCG06G018170	Watermelon (Charleston Gray)	cmawcgB072
CmaCh10G000360	CSPI01G00260	Wild cucumber (PI 183967)	cmacpiB049
CmaCh10G000360	CmoCh10G000320	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G000360	Lsi06G016660	Bottle gourd (USVL1VR-Ls)	cmalsiB072
CmaCh10G000360	MELO3C026179.2	Melon (DHL92) v3.6.1	cmamedB068
CmaCh10G000360	CsaV3_1G000250	Cucumber (Chinese Long) v3	cmacucB0058
CmaCh10G000360	Cla97C06G127950	Watermelon (97103) v2	cmawmbB082
CmaCh10G000360	Bhi02G000489	Wax gourd	cmawgoB0080
CmaCh10G000360	Carg10258	Silver-seed gourd	carcmaB0510

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G000360	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G000360	Cucurbita pepo (Zucchini)	cmacpeB082
CmaCh10G000360	Cucurbita pepo (Zucchini)	cmacpeB094
CmaCh10G000360	Bottle gourd (USVL1VR-Ls)	cmalsiB056
CmaCh10G000360	Cucumber (Gy14) v2	cgybcmaB004
CmaCh10G000360	Cucumber (Gy14) v2	cgybcmaB025
CmaCh10G000360	Cucumber (Gy14) v2	cgybcmaB289
CmaCh10G000360	Melon (DHL92) v3.6.1	cmamedB053
CmaCh10G000360	Silver-seed gourd	carcmaB0686
CmaCh10G000360	Silver-seed gourd	carcmaB0853
CmaCh10G000360	Cucumber (Chinese Long) v3	cmacucB0078
CmaCh10G000360	Cucumber (Chinese Long) v3	cmacucB0085
CmaCh10G000360	Watermelon (97103) v2	cmawmbB068
CmaCh10G000360	Wax gourd	cmawgoB0066
CmaCh10G000360	Cucurbita maxima (Rimu)	cmacmaB092
CmaCh10G000360	Cucurbita maxima (Rimu)	cmacmaB073
CmaCh10G000360	Cucurbita maxima (Rimu)	cmacmaB101
CmaCh10G000360	Cucurbita moschata (Rifu)	cmacmoB069
CmaCh10G000360	Cucurbita moschata (Rifu)	cmacmoB084
CmaCh10G000360	Wild cucumber (PI 183967)	cmacpiB063
CmaCh10G000360	Cucumber (Chinese Long) v2	cmacuB071
CmaCh10G000360	Melon (DHL92) v3.5.1	cmameB051
CmaCh10G000360	Watermelon (Charleston Gray)	cmawcgB061
CmaCh10G000360	Watermelon (97103) v1	cmawmB053