CSPI01G00260 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G00260
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr1 : 146569 .. 147610 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGTGGAAACTCCAAGCTTAATCCAGGAGGAGAGTTGGTTCCTCCAAGGATTCGCCCACTTCATGTACGAAATAAACTTTTGGAGTTGAGGAAACGTAAGAATGGAACCCATCTTAGAGATGGAGCATTGTCAAAAAAAGTGCTTCTGAAAGATGGAGAATCAGAAGAAGAGAACGCTATGCATGTCGATAACAGACATGAGTGTGGCAGCACAAAATGTTTGGCCTCACAACAACACACCAACAATAATAATGCAACCAAAGATGAGCATAATTCAGCTTCAACCATTCCTCCATCCAACAACAATGCTAGTGCAACAAAAACTGGTGAACAAAGCAACCACATCTTGGAGGAGGAGCCTCAACCACACATACAATTGAAAGCTACCCACCCTGATGACACTCCTGTTCTTGAACTTAAACAAGATAAAACCATGAATGAACATAAATGTATCCAAGAAGGAGATGAAAACAACAAGAAAGAAGGAGAAGATGGGAGGCCTGACAACGAAGAGAGTCGAGGAAGCTTCATTTGTCCTGGATCTCCCAGTTTCAGACTTTATTTTGTTGAAGAAACACAAGACGACAAAGAAAAAGGTAAACATGCAATAACAAAACAAAACTTTCAAGTTAAATTTCGAAATCTTCCAATATTATGACCAACACAGTAACATAGTACATTTTGTGCAGTTGAAATGAAAGATGCAAGTGGTATGGGAGATGTCTCACACAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCACTAGTGCAAAATGTGACGAGGTCAGTCACCACATCCCCAACTTTAGAAGATTAGGTGTTATGGATATTTGATTTGATTTCACTTGAACAGGGCCAGGAGAACAAGGCAATAAAGAAAGGGAAAAAGGAAACGACTTTCAATAGAGTCGTCAGTAAAAAAAGACCAGTTAGCGTTGGTGTCAAGAATTTGTTGAATGTTAAATCTTGCTATCATTTGAGTTGTTCCGGCAATGACAGAGCCAATCTTCTAGCTAGAAAAGCCGAAGCTTAA

mRNA sequence

ATGGGGTGTGGAAACTCCAAGCTTAATCCAGGAGGAGAGTTGGTTCCTCCAAGGATTCGCCCACTTCATGTACGAAATAAACTTTTGGAGTTGAGGAAACGTAAGAATGGAACCCATCTTAGAGATGGAGCATTGTCAAAAAAAGTGCTTCTGAAAGATGGAGAATCAGAAGAAGAGAACGCTATGCATGTCGATAACAGACATGAGTGTGGCAGCACAAAATGTTTGGCCTCACAACAACACACCAACAATAATAATGCAACCAAAGATGAGCATAATTCAGCTTCAACCATTCCTCCATCCAACAACAATGCTAGTGCAACAAAAACTGGTGAACAAAGCAACCACATCTTGGAGGAGGAGCCTCAACCACACATACAATTGAAAGCTACCCACCCTGATGACACTCCTGTTCTTGAACTTAAACAAGATAAAACCATGAATGAACATAAATGTATCCAAGAAGGAGATGAAAACAACAAGAAAGAAGGAGAAGATGGGAGGCCTGACAACGAAGAGAGTCGAGGAAGCTTCATTTGTCCTGGATCTCCCAGTTTCAGACTTTATTTTGTTGAAGAAACACAAGACGACAAAGAAAAAGTTGAAATGAAAGATGCAAGTGGTATGGGAGATGTCTCACACAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCACTAGTGCAAAATGTGACGAGGGCCAGGAGAACAAGGCAATAAAGAAAGGGAAAAAGGAAACGACTTTCAATAGAGTCGTCAGTAAAAAAAGACCAGTTAGCGTTGGTGTCAAGAATTTGTTGAATGTTAAATCTTGCTATCATTTGAGTTGTTCCGGCAATGACAGAGCCAATCTTCTAGCTAGAAAAGCCGAAGCTTAA

Coding sequence (CDS)

ATGGGGTGTGGAAACTCCAAGCTTAATCCAGGAGGAGAGTTGGTTCCTCCAAGGATTCGCCCACTTCATGTACGAAATAAACTTTTGGAGTTGAGGAAACGTAAGAATGGAACCCATCTTAGAGATGGAGCATTGTCAAAAAAAGTGCTTCTGAAAGATGGAGAATCAGAAGAAGAGAACGCTATGCATGTCGATAACAGACATGAGTGTGGCAGCACAAAATGTTTGGCCTCACAACAACACACCAACAATAATAATGCAACCAAAGATGAGCATAATTCAGCTTCAACCATTCCTCCATCCAACAACAATGCTAGTGCAACAAAAACTGGTGAACAAAGCAACCACATCTTGGAGGAGGAGCCTCAACCACACATACAATTGAAAGCTACCCACCCTGATGACACTCCTGTTCTTGAACTTAAACAAGATAAAACCATGAATGAACATAAATGTATCCAAGAAGGAGATGAAAACAACAAGAAAGAAGGAGAAGATGGGAGGCCTGACAACGAAGAGAGTCGAGGAAGCTTCATTTGTCCTGGATCTCCCAGTTTCAGACTTTATTTTGTTGAAGAAACACAAGACGACAAAGAAAAAGTTGAAATGAAAGATGCAAGTGGTATGGGAGATGTCTCACACAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCACTAGTGCAAAATGTGACGAGGGCCAGGAGAACAAGGCAATAAAGAAAGGGAAAAAGGAAACGACTTTCAATAGAGTCGTCAGTAAAAAAAGACCAGTTAGCGTTGGTGTCAAGAATTTGTTGAATGTTAAATCTTGCTATCATTTGAGTTGTTCCGGCAATGACAGAGCCAATCTTCTAGCTAGAAAAGCCGAAGCTTAA

Homology

[Close]

BLAST of CSPI01G00260 vs. TrEMBL
Match: A0A0A0LNT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000760 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 1.9e-160
Identity = 291/292 (99.66%), Postives = 292/292 (100.00%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE 120
           AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE
Sbjct: 61  AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE 120

Query: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEESRGSFIC 180
           EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEE+RGSFIC
Sbjct: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRGSFIC 180

Query: 181 PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240
           PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI
Sbjct: 181 PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240

Query: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 293
           KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Sbjct: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]

BLAST of CSPI01G00260 vs. TrEMBL
Match: W9R5I1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008832 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22
Identity = 107/302 (35.43%), Postives = 157/302 (51.99%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGC NSKLN     +PP++RPL  R K+ ELR+R++      G LSKK LL DG  EE +
Sbjct: 1   MGCQNSKLNRDILAIPPKLRPLLWR-KVEELRRRRSAATANGGTLSKKELLTDGVREESD 60

Query: 61  AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE 120
           A   D  HE         + +  N+  +   H S S+      +AS  KT      I EE
Sbjct: 61  AFSRD--HES------LHENYERNDTTSSPGHESVSS------SASQPKT-----IITEE 120

Query: 121 EPQPHIQLKATHPDDTPV-LELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEESRGSFI 180
           + +   + +   P+ T + +E +  +   +    ++ +E  K+E ED   ++E  + + I
Sbjct: 121 DKKKTSEEEIVEPEKTEINMESENQERSGKDDKEEKEEEEAKEEKEDDLTEDEGDQEAKI 180

Query: 181 CPGSPSFRLYFV--------EETQDDKEKVEMKDASGMGDVSHKKSPSRD-SVESTTSAK 240
           CP SPSFR+YF+        E+  DD+   E KD S   +   +K  +R+ SVES     
Sbjct: 181 CPSSPSFRVYFIESLDQEEEEKKDDDEPDHEDKDDSKENENDMQKEWNRENSVESVVLID 240

Query: 241 CDEGQENKAIKK--GKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLAR 291
             E QE K +KK  GK    F R + +  PV+  VK+LLNV+SCYH S   +DRA+LLA+
Sbjct: 241 THEDQETKIVKKKSGKSRMRFRRALCRGGPVA--VKHLLNVRSCYHPS---SDRASLLAK 277

[Close]

BLAST of CSPI01G00260 vs. TrEMBL
Match: M5W8K2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025874mg PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.5e-13
Identity = 101/314 (32.17%), Postives = 147/314 (46.82%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLR-DGALSKKVLLKDGESEEE 60
           MG  NSKL P GE VPPRIR L ++ K  E+R R     L+     SKK LLKDGE EE 
Sbjct: 1   MGGQNSKLTPEGEAVPPRIRSL-LQRKFEEIRGRTKAKKLKASHTFSKKQLLKDGEQEE- 60

Query: 61  NAMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILE 120
             + +   H   S+                          P   N  + KT  Q+  +L 
Sbjct: 61  --VDISVPHSLQSS--------------------------PEFENLPSPKT-PQTLELLP 120

Query: 121 EEPQPHIQLKATHPD-------DTPVLELKQDKTMNEH----KCIQEGDENNKKEGEDGR 180
             P+   + K +  D       +  V + K+ K +N +      + E  E  ++E ED  
Sbjct: 121 RLPELDRRAKQSDEDQIRRDGAEFSVEDDKEAKGVNVYIGGVFAMGETTEGEEEE-EDEV 180

Query: 181 PDNEESRGS--FICPGSPSFRLYFVE--ETQDDKEKVEMKDASGMGDVSHKKSPSRDSVE 240
            D    R S   +CP SPSFR+Y +E  E ++D  K ++ D     D  HKKSPS +S +
Sbjct: 181 NDAGMQRNSKIHLCPASPSFRVYCMEPLEIENDDSKDDITDE----DFKHKKSPSAESAD 240

Query: 241 STTSA-----KCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCS- 293
           S+  +     + ++ Q+ K  +KG++     R+ +  RP +  VKNLLNVK CY+  C+ 
Sbjct: 241 SSVDSVRSMIETNDVQDTKTKQKGRRR---RRIKNALRPNT--VKNLLNVKGCYYAGCTG 273

[Close]

BLAST of CSPI01G00260 vs. TrEMBL
Match: A0A151RRF6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_033325 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.6e-13
Identity = 86/292 (29.45%), Postives = 131/292 (44.86%), Query Frame = 1


Query: 1   MGCGNSKLNPG-GELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEE 60
           MG GNSKLN   GE+VPP+IRP+ V  K  + +KR N     +  LSKK LLK+   E++
Sbjct: 1   MGIGNSKLNAAEGEVVPPKIRPMLVF-KYEDFKKRTNA----ETNLSKKKLLKEATEEDD 60

Query: 61  NAMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILE 120
           N++ +                         +E   +  +P +N+     K     NH L+
Sbjct: 61  NSLEIQ----------------------PSEEEKVSRVVPMANSECPILK----DNHPLD 120

Query: 121 EEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEESRGSFI 180
           +    H  L A   +D                   +GD+++  +  D   D     G  I
Sbjct: 121 QHNMNHAVLSAEAMEDA------------------KGDDHDDNDHNDNNDD-----GRNI 180

Query: 181 CPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKA 240
           CPGSPSFR+Y ++  + D    +         V H++S S DSVE   S +     E ++
Sbjct: 181 CPGSPSFRIYCIDNEECDNYPTKTV-------VMHQRSHSADSVERVASTEVLPEVETES 223

Query: 241 IKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYH--LSCSGNDRANLLARK 290
           I   K++       +KK+     ++ LL VKSCYH   +C+GNDR  ++A K
Sbjct: 241 ISTPKRKG------NKKK--FGAMRTLLKVKSCYHPIRNCTGNDRGLIVAAK 223

[Close]

BLAST of CSPI01G00260 vs. TrEMBL
Match: A0A0R0K3F1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G202200 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12
Identity = 87/306 (28.43%), Postives = 143/306 (46.73%), Query Frame = 1


Query: 1   MGCGNSKLNPG-GELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEE 60
           MG GNSK N   GE +PP+IRP+ V ++  E RKR+NG    +  LSKK LL + +   +
Sbjct: 1   MGIGNSKSNAAEGERLPPKIRPMLV-SRFEEFRKRRNG----ETTLSKKNLLNEEDDNSQ 60

Query: 61  NAMHVDNRHECGSTKCLASQQHTNNNNATKDE-------------HNSASTIPPSNNNAS 120
           ++   +  ++  S+K +   +          E              N   T P  +N   
Sbjct: 61  SSHRTEEENKVSSSKEIEPPKEETVERVITAEKLSRVVPVPNSECENVEETHPNKDNIEQ 120

Query: 121 ATKTGEQSNHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGED 180
             K  + S  +     +       T  + T  L +++ K   + K   +GD++++  G++
Sbjct: 121 VIKYMDPSQDVFNRAVEMAEAEVKTEEEKTAEL-VEETKEEKKQKVDAKGDDHHEDSGDE 180

Query: 181 GRPDNEESRGSFICPGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVEST 240
              D  E  G F+CPGSPSFR+Y +E      EK   ++ +G   +  +KS S DSVE+ 
Sbjct: 181 ---DESEKVGRFLCPGSPSFRIYCIE-----AEKRNEEECNG-PTIVLQKSRSVDSVETA 240

Query: 241 TSAKCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYH--LSCSGNDRAN 291
            S   +E  E+ + +KG K+                +K LL VKS YH   +C+G+D+++
Sbjct: 241 ESTNSNEELESTSKRKGHKKK------------FGAMKTLLKVKSLYHPMCTCTGDDKSH 279

[Close]

BLAST of CSPI01G00260 vs. TAIR10
Match: AT5G50830.2 (AT5G50830.2 unknown protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 90/316 (28.48%), Postives = 145/316 (45.89%), Query Frame = 1


Query: 1   MGCGNSKLN--------PGGEL-VPPRIRPLHVRNKLLELRKRKNGTHLRDG-ALSKKVL 60
           MGCG S+L          GG + +P  IRPL +R +L E++KR +   L+    LSKK L
Sbjct: 1   MGCGGSRLGGVATTRAEEGGVVPLPAGIRPL-LRRRLEEMKKRSHAGVLKGSQTLSKKEL 60

Query: 61  LKDGESEEENAMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNN-----NA 120
           L+   SE+      D     GS K  A      ++N  + +      IP  ++       
Sbjct: 61  LRHNSSEDGE----DTEENDGSLKASAKVAPAPDHNVEEKKEVIYEKIPSKDDVKEVKEE 120

Query: 121 SATKTGEQSNH---ILEEEPQPHIQL-----KATHPDDTPVLELKQDKTMNEHKCIQEGD 180
                 E+ NH   ++E++ + + ++     +  H DD  V+ +K+           EGD
Sbjct: 121 VVVNKQEEDNHHQDVVEKQEEENKEVVKKQEEENHDDDVVVINVKK-----------EGD 180

Query: 181 ENNKKEGEDGRPDNEESRGSFICPGSPSFRLYFVE-ETQDDKEKVEMKDASGMGDVSHKK 240
           +    + ++G  +N + R   I PGSPSFR+Y V+  + DD E+ +++DA        +K
Sbjct: 181 DGKNHDVDEGSINNFDER--MIGPGSPSFRVYCVDVPSDDDDEEKDVEDA--------RK 240

Query: 241 SPSRDSVESTTSAKCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKS-CY-H 291
           S   +SV  TT  K  +G     +KK KKE        K+  +++  K L NV + CY  
Sbjct: 241 SMETESV--TTEIKEVDG---SIVKKEKKERR-----GKRFGIALPRKYLANVTAPCYAG 280

[Close]

BLAST of CSPI01G00260 vs. NCBI nr
Match: gi|778655250|ref|XP_011649820.1| (PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis sativus])

HSP 1 Score: 573.2 bits (1476), Expect = 2.7e-160
Identity = 291/292 (99.66%), Postives = 292/292 (100.00%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE 120
           AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE
Sbjct: 61  AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE 120

Query: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEESRGSFIC 180
           EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEE+RGSFIC
Sbjct: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRGSFIC 180

Query: 181 PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240
           PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI
Sbjct: 181 PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240

Query: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 293
           KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Sbjct: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]

BLAST of CSPI01G00260 vs. NCBI nr
Match: gi|659128822|ref|XP_008464387.1| (PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 6.0e-144
Identity = 268/292 (91.78%), Postives = 275/292 (94.18%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKLNP GELVPPRIRPL VRNK LELRKRKNGTHLRDGALSKKVLLK+GESEEEN
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE 120
           AM VDNRHECGSTKCLASQQHT NN ATKDEHNSASTIPPSNN+A+ATK GEQSN ILEE
Sbjct: 67  AMFVDNRHECGSTKCLASQQHTINN-ATKDEHNSASTIPPSNNDANATKNGEQSNRILEE 126

Query: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEESRGSFIC 180
           EP+PHIQLK THPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEE+RGS IC
Sbjct: 127 EPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRGSIIC 186

Query: 181 PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240
           PGSPSFR YFVEETQDDKEKVEMKDA GMGDVSHKKSPS DSVESTTSAK  EGQENK I
Sbjct: 187 PGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEGQENKVI 246

Query: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 293
           KKGKK TTFNRV+SK+RPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Sbjct: 247 KKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 297

[Close]

BLAST of CSPI01G00260 vs. NCBI nr
Match: gi|703089924|ref|XP_010093939.1| (hypothetical protein L484_008832 [Morus notabilis])

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22
Identity = 107/302 (35.43%), Postives = 157/302 (51.99%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGC NSKLN     +PP++RPL  R K+ ELR+R++      G LSKK LL DG  EE +
Sbjct: 1   MGCQNSKLNRDILAIPPKLRPLLWR-KVEELRRRRSAATANGGTLSKKELLTDGVREESD 60

Query: 61  AMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEE 120
           A   D  HE         + +  N+  +   H S S+      +AS  KT      I EE
Sbjct: 61  AFSRD--HES------LHENYERNDTTSSPGHESVSS------SASQPKT-----IITEE 120

Query: 121 EPQPHIQLKATHPDDTPV-LELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEESRGSFI 180
           + +   + +   P+ T + +E +  +   +    ++ +E  K+E ED   ++E  + + I
Sbjct: 121 DKKKTSEEEIVEPEKTEINMESENQERSGKDDKEEKEEEEAKEEKEDDLTEDEGDQEAKI 180

Query: 181 CPGSPSFRLYFV--------EETQDDKEKVEMKDASGMGDVSHKKSPSRD-SVESTTSAK 240
           CP SPSFR+YF+        E+  DD+   E KD S   +   +K  +R+ SVES     
Sbjct: 181 CPSSPSFRVYFIESLDQEEEEKKDDDEPDHEDKDDSKENENDMQKEWNRENSVESVVLID 240

Query: 241 CDEGQENKAIKK--GKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLAR 291
             E QE K +KK  GK    F R + +  PV+  VK+LLNV+SCYH S   +DRA+LLA+
Sbjct: 241 THEDQETKIVKKKSGKSRMRFRRALCRGGPVA--VKHLLNVRSCYHPS---SDRASLLAK 277

[Close]

BLAST of CSPI01G00260 vs. NCBI nr
Match: gi|657965116|ref|XP_008374202.1| (PREDICTED: uncharacterized protein LOC103437503 [Malus domestica])

HSP 1 Score: 90.9 bits (224), Expect = 4.0e-15
Identity = 98/304 (32.24%), Postives = 140/304 (46.05%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGA-LSKKVLLKDGESEEE 60
           MG  NSKL P  E VPPRI  L ++ +  E++ R     L+  + LSKK LLKD   EE 
Sbjct: 1   MGDQNSKLTPEAEAVPPRILSL-LQRRFEEMKSRSKARKLKAASTLSKKQLLKDCAQEE- 60

Query: 61  NAMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILE 120
               VDN     S +C                 N +   P S      TK        ++
Sbjct: 61  ----VDNSL-LHSPQCSPESDKITFPKIPPTLENKSKVAPISQECDKGTKQ-------VD 120

Query: 121 EEPQPHIQLKATHPDDTPVLELKQDKTMNEH---KCIQEGDENNKKEGEDGRPDNEESRG 180
           +E Q   Q K    + + V + K+ K +N +       E     ++E ED     + +R 
Sbjct: 121 DEDQKKEQSKRDGTECS-VEDHKEPKGVNVYIGGVFAMEDTTEGEEEDEDNEDGTQRNRE 180

Query: 181 SFICPGSPSFRLYFVE--ETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCD-- 240
            F+CP SPSF++Y +E  E ++D  K    D++   D+ HKKSPS  SV+ +  +     
Sbjct: 181 FFMCPASPSFKIYCMEALEIENDSSKY---DSTTDEDIKHKKSPSAASVDCSVDSLASTT 240

Query: 241 ---EGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCS-GNDRANLLAR 293
              +GQ  K  KKG++                GVKNLL++K CY+L CS G+DRA  LA 
Sbjct: 241 DHHDGQVTKTKKKGRRRRRVRN--------GFGVKNLLHIKGCYYLGCSGGHDRATYLAE 278

[Close]

BLAST of CSPI01G00260 vs. NCBI nr
Match: gi|694419165|ref|XP_009337549.1| (PREDICTED: uncharacterized protein LOC103929997 [Pyrus x bretschneideri])

HSP 1 Score: 90.1 bits (222), Expect = 6.8e-15
Identity = 97/306 (31.70%), Postives = 136/306 (44.44%), Query Frame = 1


Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGA-LSKKVLLKDGESEEE 60
           MG  NSKL P  E VPPRIR L ++ +  E++ R     L+  + LSKK LLKDG+ EE 
Sbjct: 1   MGGQNSKLTPEAEAVPPRIRSL-LQRRFEEMKSRSKARKLKAASTLSKKQLLKDGDQEEV 60

Query: 61  NAMHVDNRHECGSTKCLASQQHTNNNNATKDE-----HNSASTIPPSNNNASATKTGEQS 120
           +           S+   + Q    ++  T+ +      N +   P S      TK  +  
Sbjct: 61  D-----------SSLPHSLQSSPESDKITRPKIPPTLENKSKVAPISPERDKGTKQADDE 120

Query: 121 NHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEES 180
           N   E+     I+   T        E K  K         E     ++E ED       +
Sbjct: 121 NQNKEQ-----IKRDGTECSVEDHKEPKGVKVYVGGVFAMEDTTEGEEEDEDNEGGIRRN 180

Query: 181 RGSFICPGSPSFRLYFVE--ETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCD 240
              F+CP SPSFR+Y +E  E ++D  K    D++   D+ HKKSPS  S  S   +   
Sbjct: 181 NEFFMCPASPSFRVYCMEALEIENDGSKY---DSTTDEDIKHKKSPSAASAHSNVDSVAS 240

Query: 241 -----EGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCS-GNDRANLL 293
                +GQ  K  KKG++         ++     GVKNLLN+K CY+  CS G DRA  L
Sbjct: 241 MTDHHDGQVTKTKKKGRRR--------RRVKNGFGVKNLLNIKGCYYPGCSGGQDRATYL 278

The following BLAST results are available for this feature:

BLAST of CSPI01G00260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G00260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNT2_CUCSA	1.9e-160	99.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000760 PE=4 SV=1	[more]
W9R5I1_9ROSA	1.4e-22	35.43	Uncharacterized protein OS=Morus notabilis GN=L484_008832 PE=4 SV=1	[more]
M5W8K2_PRUPE	4.5e-13	32.17	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025874mg PE=4 SV=1	[more]
A0A151RRF6_CAJCA	7.6e-13	29.45	Uncharacterized protein OS=Cajanus cajan GN=KK1_033325 PE=4 SV=1	[more]
A0A0R0K3F1_SOYBN	2.2e-12	28.43	Uncharacterized protein OS=Glycine max GN=GLYMA_05G202200 PE=4 SV=1	[more]

BLAST of CSPI01G00260 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50830.2	2.3e-08	28.48	unknown protein	[more]

BLAST of CSPI01G00260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778655250\|ref\|XP_011649820.1\|	2.7e-160	99.66	PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis sativus...	[more]
gi\|659128822\|ref\|XP_008464387.1\|	6.0e-144	91.78	PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis melo]	[more]
gi\|703089924\|ref\|XP_010093939.1\|	2.0e-22	35.43	hypothetical protein L484_008832 [Morus notabilis]	[more]
gi\|657965116\|ref\|XP_008374202.1\|	4.0e-15	32.24	PREDICTED: uncharacterized protein LOC103437503 [Malus domestica]	[more]
gi\|694419165\|ref\|XP_009337549.1\|	6.8e-15	31.70	PREDICTED: uncharacterized protein LOC103929997 [Pyrus x bretschneideri]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G00260.1	CSPI01G00260.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G00260	Cla019305	Watermelon (97103) v1	cpiwmB099
CSPI01G00260	Csa1G000760	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G00260	MELO3C026179	Melon (DHL92) v3.5.1	cpimeB055
CSPI01G00260	ClCG06G018170	Watermelon (Charleston Gray)	cpiwcgB083
CSPI01G00260	Lsi06G016660	Bottle gourd (USVL1VR-Ls)	cpilsiB070
CSPI01G00260	MELO3C026179.2	Melon (DHL92) v3.6.1	cpimedB049
CSPI01G00260	CsaV3_1G000250	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G00260	Cla97C06G127950	Watermelon (97103) v2	cpiwmbB079
CSPI01G00260	Bhi02G000489	Wax gourd	cpiwgoB081
CSPI01G00260	Cucsa.157070	Cucumber (Gy14) v1	cgycpiB229
CSPI01G00260	CmaCh10G000360	Cucurbita maxima (Rimu)	cmacpiB049
CSPI01G00260	CmoCh10G000320	Cucurbita moschata (Rifu)	cmocpiB040
CSPI01G00260	Carg10258	Silver-seed gourd	carcpiB0396

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G00260	Cucurbita pepo (Zucchini)	cpecpiB361
CSPI01G00260	Cucurbita pepo (Zucchini)	cpecpiB515
CSPI01G00260	Cucurbita pepo (Zucchini)	cpecpiB656
CSPI01G00260	Bottle gourd (USVL1VR-Ls)	cpilsiB001
CSPI01G00260	Bottle gourd (USVL1VR-Ls)	cpilsiB041
CSPI01G00260	Melon (DHL92) v3.6.1	cpimedB014
CSPI01G00260	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G00260	Cucumber (Gy14) v2	cgybcpiB013
CSPI01G00260	Cucumber (Gy14) v2	cgybcpiB095
CSPI01G00260	Silver-seed gourd	carcpiB0642
CSPI01G00260	Cucumber (Chinese Long) v3	cpicucB015
CSPI01G00260	Cucumber (Chinese Long) v3	cpicucB028
CSPI01G00260	Cucumber (Chinese Long) v3	cpicucB053
CSPI01G00260	Watermelon (97103) v2	cpiwmbB051
CSPI01G00260	Wax gourd	cpiwgoB061
CSPI01G00260	Wild cucumber (PI 183967)	cpicpiB003
CSPI01G00260	Wild cucumber (PI 183967)	cpicpiB014
CSPI01G00260	Cucurbita maxima (Rimu)	cmacpiB085
CSPI01G00260	Cucurbita maxima (Rimu)	cmacpiB227
CSPI01G00260	Cucurbita moschata (Rifu)	cmocpiB079
CSPI01G00260	Cucurbita moschata (Rifu)	cmocpiB213
CSPI01G00260	Cucurbita moschata (Rifu)	cmocpiB396
CSPI01G00260	Cucumber (Chinese Long) v2	cpicuB009
CSPI01G00260	Cucumber (Chinese Long) v2	cpicuB024
CSPI01G00260	Melon (DHL92) v3.5.1	cpimeB015
CSPI01G00260	Melon (DHL92) v3.5.1	cpimeB079
CSPI01G00260	Watermelon (Charleston Gray)	cpiwcgB053
CSPI01G00260	Watermelon (97103) v1	cpiwmB029