CsaV3_1G000250 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000250
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionhistone-lysine N-methyltransferase SETD1A
Locationchr1 : 159528 .. 165870 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTGGAAACTCCAAGCTTAATCCAGGAGGAGAGTTGGTTCCTCCAAGGATTCGCCCACTTCATGTACGAAATAAACTTTTGGAGTTGAGGAAACGTAAGAATGGAACCCATCTTAGAGATGGAGCATTGTCAAAAAAAGTGCTTCTGAAAGATGGAGAATCAGAAGAAGAGAACGCTATGCATGTCGATAACAGACATGAGTGTGGCAGCACAAAATGTTTGGCCTCACAACAACACACCAACAATAATAATGCAACCAAAGATGAGCATAATTCAGCTTCAACCATTCCTCCATCCAACAACAATGCTAGTGCAACAAAAACTGGTGAACAAAGCAACCACATCTTGGAGGAGGAGCCTCAACCACACATACAATTGAAAGCTACCCACCCTGATGACACTCCTGTTCTTGAACTTAAACAAGATAAAACCATGAATGAACATAAATGTATCCAAGAAGGAGATGAAAACAACAAGAAAGAAGGAGAAGATGGGAGGCCTGACAACGAAGAGAATCGAGGAAGCTTCATTTGTCCTGGATCTCCCAGTTTCAGACTTTATTTTGTTGAAGAAACACAAGACGACAAAGAAAAAGGTAAAAATGCAATAACAAAACAAAACTTTCAAGTTAAATTTCGAAATCTTCCTATATTATGACCAACACAGTAACATAGTACATTTTGTGCAGTTGAAATGAAAGATGCAAGTGGTATGGGAGATGTCTCACACAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCACTAGTGCAAAATGTGACGAGGTCAGTCACCACATCCCCAACTTTAGAAGATTAGGTGTTATGGATATTTGATTTGATTTCACTTGAACAGGGCCAGGAGAACAAGGCAATAAAGAAAGGGAAAAAGGAAACGACTTTCAATAGAGTCGTCAGTAAAAAAAGACCAGTTAGCGTTGGTGTCAAGAATTTGTTGAATGTTAAATCTTGCTATCATTTGAGTTGTTCCGGCAATGACAGAGCCAATCTTCTAGCTAGAAAAGCCGAAGCTTAAGATTTTCCCAGCAATGGAAGGGACAGTTTGTACCCCTCCTATCTCCATCTCAAGGGGTTGGGGAATGGAGGTTTCATGCTGATTTTTTAGGCCATTAGTCCCTCAATGTGATCTAACTCATCATAAATAGCTACAATTTGTAGCTATAATGTAACGATTAATTAATTCGTTTAAATACCTTGTCATTCAACTACCATTTCTAACATTGTTATACATCAACTATATTCTCCTATTTAACCATTTTCATTACACCACAAATATTCACCGTAAAAAATACACACAAATTCTTCATTTTCTTAACTTCACAAAACTTCCACATAAAAACACAAGAAAATTAATAGGTGCAAAATTAAAAGTTCACCAAATTACTTGGATTGCTCACTGAAAGCAGAAGAGAGGAAGTCCTCATCCTCCTCCAAGATTTCCAGATTCTTGGATTTCAGTATGAAACTAACAGCTCCTTCATCAAAATTCAACACAAATGCCAACTTGATGAGCTCAGATAATGCACATATATAATCATTGTACTCCCAAAGAACACCTTCAGATATGACCTCAGAAAAATAGGTAGCATACTCGATCATCTCCTTATGTCCACCTGACATTACCATTTTCTGAGTGAACAGCTTTGAACTCTTCCTTTCCCAACGTATCAATTGGGTTGCTTTAGCGCTGATGACCTTCCCAGAAGTTAGTGATAAAACATAGTTTATCAGGACCGGTTCTCCAGTCTCAAGAACAGTAAGATTGAGGAGACATCGAACAATTTCAAGCCTCTTCGTGGCTTCAATTTTTTTATCAGGGTCTGCTAAGAAACCAAGAATGATCCGAATCAGTTCTTTTCCAATTGAAATGTCTATTGGATTCACTGGCTTGAGATTGATTCCATCAACTATTGCTGACTCCACCTTCTGAACAGACTCGGAGATATTTCGAACCCCAATCTTCTTGTAAACTTCCAACAACCTTGTCCGAGACAAGGAATTTGAGCTTGACTGAGGATACCATACAAAGATCGGAAGAGGAGACTTCCGTTCAAATAAATCCTTCAGTTGTAGATCATCGCCAATAAAAACATCGCGCTTATCAAACAAAGAAACTCCATCTGAGCCAGACATTGCAGGCACCTTGACAATGGCATCCCTAAAAGCTTGCTCAGTTTTTGAACCGAAGTGCTTGGTAACATATTTCCAGAACTTACAGCACTTGTCATGGGAAAGTCCATCATGATTGCTTTCCCAACTTTTCCATAGTTTGCAGTAATCGTCAGTAGAAGGATTGGATCTTACTTTAAAGGCTACGGAAAAGAACAAAATTAGATCTGGTTTATAGTATCTCTCAAGAACTATTAACTGCAAGCCAAAAAGATCCTCCTTGTCAAAAAGTACACATTTTTCCGGGTTGATCCACCGTCCGTTAGAATCTCCAACAGGCACCCAAATCCTTGCAGCAGCTTCAGTGTCTGGGTACCAATTGAATGCACTCAAATACGTATATATCCGTACCATAGTGGAGAACTGGTCCTGAGAGTTTAGAAAACGTGAAACTAGTTGACATCCATGTTCCAATTCAACTATAACCCCTATTTCTTTGAGCTCCCTTTTATACAGCTTGATGTCAAATGTGTAGAATTGTTCATCGATGAAAGGCCCATCAGTCGGCTTCAGATAAGAATTCCACTCACGAATGAAGAGCAAACTCTCTTTTGGAGACCTGTAACCTTTAGAGGTCTTCAACCATTTCCGAGATACCTTTCCAGAGAAATCGTCTGGTAGGGAAGGATTCTTCTCCAGCAAAGTTCGGATGCAGTTCAAAAGTGAATGGATATTTTTAGAAGTAATTTTACCAGGATCTTGGGGAAGATAAAGCCCGGCAGCAACCATATGAGCACCATCTTCAAAATTAGTAATAACTCCCATACTCTTCAACTCTTTTTTGTATTCATGAATTTGGCTTCCATAGTAGTTGTTACTATCATCGACAAAAGGTAGAAGAGTAATTGCAGATATGGATTCCCAACTTGGACCATACAATATGCAATCTTTAGGAGACCTATAATCACCGAGTCGAGTCCGCAACCACTTCAACTCCTGAATGTACTTCTTAAGATCTGAAGGTAACTTTTTGGTTGAATCTTTAAGCTGTTTGTAGCATGACAGAAACGATATTGCATTTTCCTCTGTTAGGGACTTCGCAGCCGCTCTTTGCCTGAACACTTCAGAAAATGCCTTGACTGCTTCTTCAAAATCAATCACCACTCCCATGTTTTTCAGCTCCCTCTTGAAAACCAAAATGCGGCTTCCATAAAAATCACAATCAACTACTGGAAAACCACTGAAAACCTGTAGAATGCAACCCCATGAAGGATCCGACAAGTAACATTCACCAGGAGATTTGTAGCCTTGATTTGTTTTGACGCATTTCACCCTTTTGAATGTCTGGACAAGAAAATCATCTGATTTGGGTTCCAACATAAAGGAAAGAATCAACAAAAATGCGTCGGCTCCAAGACAAGTTAATTGAGAAGATGGCTTCAAATTGTTCGCAACAAGTTGAGAAACTTTGTGGAAGTCAACCACCACACCAAGCAATTTAAGTTCTTCCCGGAACGAAATTATCTCATCGCCATAGTAGACCTGGTCTATAAAAGGGATGTTGCTCAGAAGTGAAGCCGTCAACCATACCTCAGAGTACAATACTGATCCAACTGGAGAAGTATAACCACGACATGTCTTGAGCCATCTCCCTTCTTTTATGCTTGCAATAAAGCCATCAACAGGAAATTTACCTTTCAAAAACCGGATGAATTTTAACATGCAAAAGACATTTTCTCTTGTCAAACTTGATAAAGTCGCCACTGACATGAGGTGATTCCCGATAAATTTTAAGACTTCATCATACTCAAACATAACACCAACAGTTTTCAGCTCCTGAGAATAGCCTTTTAACTCATTGCCATAGAATCTGTGATCAATCTGGGGGATGTCCACCAGGACTGACCCACTTTGCAAAACACTTGACCATGACGAGGAGATGTCAAAAGACTGAGATGGTGGCCTATAGCTAGAAGATCCGTTCAAAGTAGTTCTTAGCCAGCAACCTTCCTTTATGCATTTCAAAAACTTGGAAGGAATAGTGTGAAAGCTACGAATCCAACGCAATAGCAAAACCGCATTTTGGACGGTAAGCGGTGAAGAGAAAACAGAAATTTCTATATTAGGTGGAGAAATAGAAGGAATATCTGATGCACGAATATGGATCTTGAGAAAACGTATTAACTGTTCTACAGTCATCGTTTCACCTGAAAAATAGGCTGGGCAAACGTAAGCAGCTCCCAACTCCACATAACCACAATTTTGCCAAGGATTTGAATCAAGCAATTGTGCCCATTTGCTACCATCTGCTGGGATGAGAAGCCCCTTCCAAGTTTTTATAACACTACCGTATTTGTCTACCACTGGCATAGCACTAGACAGAGACTGAATCTCCTCATCAGTCAGATAACGCTTTGACGATGAGTGATATAGGAAGTGAAAATAAGTAATTATGTGTTCTGGGTTATTCCCAAGAGAATTGACAAGGAGCTTTGCAAATTGAAATATGGTGATGGTATCAACCTTAACCTGGTCCTGAAGCCATTGCAATAGCATGTCCTTATTCCTAGGACATGATTCGATAGATTTATGTGTGCTTTCGGGCATAAAAGAACATGTGGAAACAGATTTGAATTCCATGTTCGATCTACTAAGCCAAGACAGATGAGAGCCTTGATGAGCAAGGTACACCCTTCTTCCACCATTCTGCGTCGACGCATTTAAACTGCATAGGGAAACATTCCCATCAAGATTAACATATCTTATAAGTGGCACGTTCTTCATGCTTGAAACATGAAATCTTGAACTCCAATTTTCTGCCACAAATTGTAGGAGCTCTAAATAAAGATCATCTGACACACCCTCCACAATGGTGGTACCCTGCAGGCATTTTGCATACCATTCCTCGTCAACTAGTTTCACGTCAAGGAAACTGAGATCCTGATCGTATTCCTTCGAATCTAAGGAGTAACTTAAGACGTGCTTTCCATGGGATGATAGATTAAGCAAACTCACCCCTTGAGTGTGTGCCTTAATTAAGATATTCCAGAAGGCGGGCATAAGTCTACCCACTTCACGAGGTTTATGGAAGAACCTCTGTTTTAAAAATGAATGACTTGGAACAATATTTTGTTGGAGCAAGTTTTCCTTGATTAAGTCTCTCACCACATTCAACTTATCAAAGGAAGAAGAAATGGTGGGCAAGAAGTTGAACATAGGGGCCAAAGAAGACAAAGGAGCTCCATCCGTATTTTTCACCAATGAAACGAAAGCATTGACAAAAGCAGAGGGAACACAGTCGAGAATACCTTGATTCCATTCGTTATCAAGGAGAATAGTTTCTCTGGATGATGATAAAACAAAATCAGACTGAATTATAAAGGGAAAGTCGGTTATCATCTCCGTGGGAAGGAAAGCGTAGACTCCAGGGGACTTATCTCCTCCGTTTAGACGTTGTCCATTTGGAAAAGCTAATATGATAACCAATTCCCCCACTCCCATCCTCCGCTCCACTCTGTTTTCTGGCTTGACAGGAAACTTTTGCTTCCACATGTAATAGGAGCATTGGGTTCCTCCAACACTTTCCTCTGAAGAGAGATGGAGAGTGTAGGACTCAGCATCAATGTTCTTCCTCGAAACGAAGTTTGTCTCACTTGAAATGGAAATCGCATTTACAGTACTGGATTTGGGATCCTCATTGACTTCCCTCACCGAAAGTTGCTTAATTTTGGAAAGAAACAGTAACACTTCTGGGTGAATGTTTGAAAGTTGCTGCTTCACAGGTTTGATCTTATCAGCCTTCAACGGTAAAACTATAGTGGTAGTTGGGAGTATAGATTGCGGGCCGTAAATTTCCTTGATGTTAGAGAGAATTCGGTTCTCTTCAACCCACTCAGGAACAACAAACCCAACCCCACAATGTGGACAAGGCTGTTCATTGAACCGTATCTGATATCCATTGCTGAATATGTATGGCTGGGAAGTAATCAGAAAAACACTTTTGAATCCAATTCCTGCACACAAAACCAACGAACTACAATTAATTTCGAAGAATTAGAAGCACAAATGTGTTAACATCTCAAATTCGTGAACTTCAGGGGAGTTGTAAATTGTTAACACGCCAAACAGGTTTAGCTTAGTAACATTGACACATTGAAATATTGGAACTGATGAAGATATTGAGATCAGAGCTTTATATAGATACGAG

mRNA sequence

ATGGGGTGTGGAAACTCCAAGCTTAATCCAGGAGGAGAGTTGGTTCCTCCAAGGATTCGCCCACTTCATGTACGAAATAAACTTTTGGAGTTGAGGAAACGTAAGAATGGAACCCATCTTAGAGATGGAGCATTGTCAAAAAAAGTGCTTCTGAAAGATGGAGAATCAGAAGAAGAGAACGCTATGCATGTCGATAACAGACATGAGTGTGGCAGCACAAAATGTTTGGCCTCACAACAACACACCAACAATAATAATGCAACCAAAGATGAGCATAATTCAGCTTCAACCATTCCTCCATCCAACAACAATGCTAGTGCAACAAAAACTGGTGAACAAAGCAACCACATCTTGGAGGAGGAGCCTCAACCACACATACAATTGAAAGCTACCCACCCTGATGACACTCCTGTTCTTGAACTTAAACAAGATAAAACCATGAATGAACATAAATTTGAAATGAAAGATGCAAGTGGTATGGGAGATGTCTCACACAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCACTAGTGCAAAATGTGACGAGGGCCAGGAGAACAAGGCAATAAAGAAAGGGAAAAAGGAAACGACTTTCAATAGAGTCGTCAGTAAAAAAAGACCAGTTAGCGTTGGTGTCAAGAATTTGTTGAATGTTAAATCTTGCTATCATTTGAGTTGTTCCGGCAATGACAGAGCCAATCTTCTAGCTAGAAAAGCCGAAGCTTAA

Coding sequence (CDS)

ATGGGGTGTGGAAACTCCAAGCTTAATCCAGGAGGAGAGTTGGTTCCTCCAAGGATTCGCCCACTTCATGTACGAAATAAACTTTTGGAGTTGAGGAAACGTAAGAATGGAACCCATCTTAGAGATGGAGCATTGTCAAAAAAAGTGCTTCTGAAAGATGGAGAATCAGAAGAAGAGAACGCTATGCATGTCGATAACAGACATGAGTGTGGCAGCACAAAATGTTTGGCCTCACAACAACACACCAACAATAATAATGCAACCAAAGATGAGCATAATTCAGCTTCAACCATTCCTCCATCCAACAACAATGCTAGTGCAACAAAAACTGGTGAACAAAGCAACCACATCTTGGAGGAGGAGCCTCAACCACACATACAATTGAAAGCTACCCACCCTGATGACACTCCTGTTCTTGAACTTAAACAAGATAAAACCATGAATGAACATAAATTTGAAATGAAAGATGCAAGTGGTATGGGAGATGTCTCACACAAGAAGTCGCCAAGTCGTGACAGCGTTGAGAGCACCACTAGTGCAAAATGTGACGAGGGCCAGGAGAACAAGGCAATAAAGAAAGGGAAAAAGGAAACGACTTTCAATAGAGTCGTCAGTAAAAAAAGACCAGTTAGCGTTGGTGTCAAGAATTTGTTGAATGTTAAATCTTGCTATCATTTGAGTTGTTCCGGCAATGACAGAGCCAATCTTCTAGCTAGAAAAGCCGAAGCTTAA

Protein sequence

MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEENAMHVDNRHECGSTKCLASQQHTNNNNATKDEHNSASTIPPSNNNASATKTGEQSNHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKFEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Homology
[Close]
BLAST of CsaV3_1G000250 vs. NCBI nr
Match: XP_011649820.1 (PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis sativus] >KGN63453.1 hypothetical protein Csa_1G000760 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 7.0e-102
Identity = 242/292 (82.88%), Postives = 242/292 (82.88%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE 120
           AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE
Sbjct: 61  AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE 120

Query: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEH------------------------------ 180
           EPQPHIQLKATHPDDTPVLELKQDKTMNEH                              
Sbjct: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRGSFIC 180

Query: 181 -------------------KFEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240
                              K EMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI
Sbjct: 181 PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240

Query: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 244
           KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Sbjct: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]
BLAST of CsaV3_1G000250 vs. NCBI nr
Match: XP_008464387.1 (PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 8.0e-90
Identity = 193/292 (66.10%), Postives = 197/292 (67.47%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKLNP GELVPPRIRPL VRNK LELRKRKNGTHLRDGALSKKVLLK+GESEEEN
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE 120
           AM VDNRHECGSTKCLAS                                 EQSN ILEE
Sbjct: 67  AMFVDNRHECGSTKCLAS-QQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRILEE 126

Query: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEH------------------------------ 180
           EP+PHIQLK THPDDTPVLELKQDKTMNEH                              
Sbjct: 127 EPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRGSIIC 186

Query: 181 -------------------KFEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240
                              K EMKDA GMGDVSHKKSPS DSVESTTSAK  EGQENK I
Sbjct: 187 PGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEGQENKVI 246

Query: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 244
           KKGKK TTFNRV+SK+RPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Sbjct: 247 KKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 297

[Close]
BLAST of CsaV3_1G000250 vs. NCBI nr
Match: XP_023516922.1 (uncharacterized protein LOC111780685 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 6.5e-39
Identity = 125/298 (41.95%), Postives = 148/298 (49.66%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKL P GE + P IRPL  R K  E RKRKNGTHLR+ ALSKKVLLK+GE EEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRETALSKKVLLKEGEIEEEN 60

Query: 61  A-MHVDNRHEC-----GSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQS 120
           + + V NR+       G T CL +                                   +
Sbjct: 61  SILPVHNRNSIYGSHDGKTICLHT----------------------KQENHKDEHDSPNA 120

Query: 121 NHILEEEPQPHIQLKATHPDDTPVLELKQDKTM-NEHK---------------------- 180
           NH+LE+    H         +   +ELK++KTM N+HK                      
Sbjct: 121 NHLLEQHKPNH---------NGSRVELKENKTMNNQHKAVEEGDDENKEXXXXGRPEEED 180

Query: 181 --------------------------FEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEG 240
                                      EM D   M D S KKSPSRDSVES++S K +EG
Sbjct: 181 NRCLICPGSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVESSSSTKSNEG 240

Query: 241 QENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKS-CYHLSCSGNDRANLLARKAE 243
           QE K  KKG K TT NR  S+KRPV VG+K+LLNV + CYHLSC+GND  N LARKAE
Sbjct: 241 QEKKTTKKGIKGTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDSGNHLARKAE 267

[Close]
BLAST of CsaV3_1G000250 vs. NCBI nr
Match: XP_022988605.1 (uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima])

HSP 1 Score: 138.3 bits (347), Expect = 3.5e-29
Identity = 112/301 (37.21%), Postives = 133/301 (44.19%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKL P GE + P IRPL  R K  E RKRKNGTHLRD ALSKKVLL +GE EEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  AMHVDNRHEC------GSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQS 120
           ++   +   C      G T CL +                                 +Q 
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHT---------------------------------KQE 120

Query: 121 NHILE-EEPQPHIQLKATHPDDTPV-LELKQDKTM-NEHK-------------------- 180
           NH  E + P  +  L+   P+D    ++LK+DKTM N+HK                    
Sbjct: 121 NHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDN 180

Query: 181 ----------------------------FEMKDASGMGDVSHKKSPSRDSVESTTSAKCD 240
                                        EM D   M D S KKSPSRDSV         
Sbjct: 181 EDNRCLICPGSPSFRVYFVEQTPNEKQNVEMNDDGDMEDASLKKSPSRDSVXXXXXXXXX 240

Query: 241 EGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKS-CYHLSCSGNDRANLLARKAE 244
                         TT NR  S+KRPV VG+K+LLNV + CYHLSC+GNDR N L  KAE
Sbjct: 241 XXXXXXXXXXXXXXTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLPIKAE 268

[Close]
BLAST of CsaV3_1G000250 vs. NCBI nr
Match: XP_022988604.1 (uncharacterized protein LOC111485806 isoform X1 [Cucurbita maxima])

HSP 1 Score: 136.7 bits (343), Expect = 1.0e-28
Identity = 112/305 (36.72%), Postives = 133/305 (43.61%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKL P GE + P IRPL  R K  E RKRKNGTHLRD ALSKKVLL +GE EEEN
Sbjct: 1   MGCGNSKLTPEGESILPMIRPLLFRTKFAEFRKRKNGTHLRDTALSKKVLLTEGEIEEEN 60

Query: 61  AMHVDNRHEC------GSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQS 120
           ++   +   C      G T CL +                                 +Q 
Sbjct: 61  SILAVHNRNCIYGSHDGKTICLHT---------------------------------KQE 120

Query: 121 NHILE-EEPQPHIQLKATHPDDTPV-LELKQDKTM-NEHK-------------------- 180
           NH  E + P  +  L+   P+D    ++LK+DKTM N+HK                    
Sbjct: 121 NHKDEHDSPNANHPLEQHKPNDNGTRVKLKEDKTMNNQHKAVEEGDDESKGEGEEGRPDN 180

Query: 181 --------------------------------FEMKDASGMGDVSHKKSPSRDSVESTTS 240
                                            EM D   M D S KKSPSRDSV     
Sbjct: 181 EDNRCLICPGSPSFRVYFVEQTPNEKQNACCTVEMNDDGDMEDASLKKSPSRDSVXXXXX 240

Query: 241 AKCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKS-CYHLSCSGNDRANLLA 244
                             TT NR  S+KRPV VG+K+LLNV + CYHLSC+GNDR N L 
Sbjct: 241 XXXXXXXXXXXXXXXXXXTTLNRAGSRKRPVGVGLKSLLNVNNCCYHLSCTGNDRGNHLP 272

[Close]
BLAST of CsaV3_1G000250 vs. TrEMBL
Match: tr|A0A0A0LNT2|A0A0A0LNT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 4.6e-102
Identity = 242/292 (82.88%), Postives = 242/292 (82.88%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN
Sbjct: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60

Query: 61  AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE 120
           AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE
Sbjct: 61  AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE 120

Query: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEH------------------------------ 180
           EPQPHIQLKATHPDDTPVLELKQDKTMNEH                              
Sbjct: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRGSFIC 180

Query: 181 -------------------KFEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240
                              K EMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI
Sbjct: 181 PGSPSFRLYFVEETQDDKEKVEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240

Query: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 244
           KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Sbjct: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 292

[Close]
BLAST of CsaV3_1G000250 vs. TrEMBL
Match: tr|A0A1S3CLT6|A0A1S3CLT6_CUCME (uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.3e-90
Identity = 193/292 (66.10%), Postives = 197/292 (67.47%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGCGNSKLNP GELVPPRIRPL VRNK LELRKRKNGTHLRDGALSKKVLLK+GESEEEN
Sbjct: 7   MGCGNSKLNPEGELVPPRIRPLLVRNKFLELRKRKNGTHLRDGALSKKVLLKEGESEEEN 66

Query: 61  AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE 120
           AM VDNRHECGSTKCLAS                                 EQSN ILEE
Sbjct: 67  AMFVDNRHECGSTKCLAS-QQHTINNATKDEHNSASTIPPSNNDANATKNGEQSNRILEE 126

Query: 121 EPQPHIQLKATHPDDTPVLELKQDKTMNEH------------------------------ 180
           EP+PHIQLK THPDDTPVLELKQDKTMNEH                              
Sbjct: 127 EPRPHIQLKTTHPDDTPVLELKQDKTMNEHKCIQEGDENNKKEGEDGRPDNEENRGSIIC 186

Query: 181 -------------------KFEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQENKAI 240
                              K EMKDA GMGDVSHKKSPS DSVESTTSAK  EGQENK I
Sbjct: 187 PGSPSFRFYFVEETQDDKEKVEMKDAGGMGDVSHKKSPSHDSVESTTSAKSGEGQENKVI 246

Query: 241 KKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 244
           KKGKK TTFNRV+SK+RPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA
Sbjct: 247 KKGKKGTTFNRVISKRRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 297

[Close]
BLAST of CsaV3_1G000250 vs. TrEMBL
Match: tr|A0A1Q3D488|A0A1Q3D488_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30716 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.4e-10
Identity = 83/295 (28.14%), Postives = 119/295 (40.34%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEEEN 60
           MGC NSKL+  GE+VP +IRPL +R KL E+++ K    + +  LSKK LLKDG  E+++
Sbjct: 1   MGCNNSKLDSEGEVVPAKIRPLLLR-KLEEIKRHK----IANATLSKKQLLKDGVEEDDH 60

Query: 61  AMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHILEE 120
           +    + H+   +K ++S                                   SN   EE
Sbjct: 61  S-SPPSVHDINESKSISSSEGSTGPAKVTPEPV--------------------SNKECEE 120

Query: 121 EPQPHIQLKATHPDD--------------------------------------------- 180
             +   Q K T  DD                                             
Sbjct: 121 SAEIMNQEKCTKQDDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRNVD 180

Query: 181 -------TPVLELKQDKTMNEHKFEMKDASGMGDVSHKKSPSRDSVESTTSAKCDEGQEN 240
                  +P   +   ++  + K E K+     D +H+KS S DS E+  S       E 
Sbjct: 181 DALICPGSPSFRVYCIQSSTDDKDESKE-----DSAHQKSWSSDSFENPESDXXXXXSET 240

Query: 241 KAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSCSGNDRANLLARKAEA 244
           K  KK KK   F RV+ K    S  VK+LLNV+SCY+ +CSG+D   LL+ +A A
Sbjct: 241 KIKKKAKKGINFRRVIPK--GTSGSVKHLLNVRSCYYPTCSGHDNTRLLSARATA 262

[Close]
BLAST of CsaV3_1G000250 vs. TrEMBL
Match: tr|A0A2C9V0A6|A0A2C9V0A6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G109000 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-05
Identity = 80/307 (26.06%), Postives = 108/307 (35.18%), Query Frame = 0 

Query: 1   MGCGNSKLNPGGELVPPRIRPLHVRNKLLELRKRKNGTHLRD---GALSKKVLLKDGESE 60
           MGC  SK NPGG+ +P R+RPL  R +  E+R+ ++G  L D      SKK LL DG  +
Sbjct: 1   MGCSGSKFNPGGKTIPARLRPLLPR-RFEEMRRWRHGGSLEDNDSAIFSKKELLIDGFFD 60

Query: 61  EENAMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQSNHI 120
            +N+ H  +      +                                        S  +
Sbjct: 61  TDNSSHPHDSDRKSISSLEDHSPKVAPAPESDETAPKNKIDPNKTAETTPLQPVSVSKDV 120

Query: 121 LEEEPQP--------------HIQLKATHPDDTPVLELKQDKTMNE-------------- 180
           + E P P               IQ      D   V E++  +T  +              
Sbjct: 121 VVEAPLPKVSTNESNKSRKENDIQQDRNDEDKEKVAEMETTETAEDENWAEVDGRLRRIT 180

Query: 181 --------------------------HKFEM-----KDASGMGDVSHKKSPSRDSVESTT 240
                                      KF +      D     D S KKS   D + ++ 
Sbjct: 181 KKYDYPGSPSFRFYCIESLSNKDDGSRKFYLMALVHADKDVDDDASDKKSEYEDCLATSE 240

Query: 241 SA-KCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYHLSC-SGNDRANL 244
           S    D G E K  KKG+K     RV+ K R  S  V NLLNVKSCY  +C    D A++
Sbjct: 241 STNNSDAGSETKTKKKGRKVIRLRRVIPKGR--SGAVMNLLNVKSCYTPTCVRRRDNAHI 300

[Close]
BLAST of CsaV3_1G000250 vs. TrEMBL
Match: tr|A0A1S2YBM3|A0A1S2YBM3_CICAR (histone-lysine N-methyltransferase SETD1A OS=Cicer arietinum OX=3827 GN=LOC101511894 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.3e-05
Identity = 84/254 (33.07%), Postives = 115/254 (45.28%), Query Frame = 0 

Query: 1   MGCGNSK-LNP-GGELVPPRIRPLHVRNKLLELRKRKNGTHLRDGALSKKVLLKDGESEE 60
           MGC +SK  NP GG+++PPRIRPL +R ++ E R+R+N     DGALSKK LLKD +++ 
Sbjct: 1   MGCNHSKSTNPNGGDVLPPRIRPL-LRQRIEEFRRRRNARGGEDGALSKKQLLKDVDNDY 60

Query: 61  E-----------NAMHVDNRHECGSTKCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           +           N +  +N+        +              XXXXXXXXXXXXX    
Sbjct: 61  DRNSYNPSTDLANEISKENQTAIEKLSQVVPLPVSECGIERHDXXXXXXXXXXXXXRLIG 120

Query: 121 XXXXEQSNHILEEEPQPHIQLKATHPDDTPVLELKQDKTMNEHKFEMKDASGMGDVSHKK 180
                   + +E E +    L  TH DD                    + +   +    K
Sbjct: 121 PRSPSFKIYCIENEEKIEEVLCDTHEDD--------------------EETNQNNALQNK 180

Query: 181 SPSRDSVESTTSAKCDEGQENKAIKKGKKETTFNRVVSKKRPVSVGVKNLLNVKSCYH-- 239
           S S DS  S  S   +    N+ +   K ETT  R   + +     +KNLLNVK      
Sbjct: 181 SLSIDSDASAASG--NTANSNEVV---KMETTPKRKGHRNK-----IKNLLNVKHLQKNR 223

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000250 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649820.17.0e-10282.88PREDICTED: probable DNA-directed RNA polymerase I subunit RPA43 [Cucumis sativus... [more]
XP_008464387.18.0e-9066.10PREDICTED: uncharacterized protein LOC103502290 [Cucumis melo][more]
XP_023516922.16.5e-3941.95uncharacterized protein LOC111780685 [Cucurbita pepo subsp. pepo][more]
XP_022988605.13.5e-2937.21uncharacterized protein LOC111485806 isoform X2 [Cucurbita maxima][more]
XP_022988604.11.0e-2836.72uncharacterized protein LOC111485806 isoform X1 [Cucurbita maxima][more]
BLAST of CsaV3_1G000250 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G000250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G000250 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNT2|A0A0A0LNT2_CUCSA4.6e-10282.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000760 PE=4 SV=1[more]
tr|A0A1S3CLT6|A0A1S3CLT6_CUCME5.3e-9066.10uncharacterized protein LOC103502290 OS=Cucumis melo OX=3656 GN=LOC103502290 PE=... [more]
tr|A0A1Q3D488|A0A1Q3D488_CEPFO2.4e-1028.14Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30716 PE=4... [more]
tr|A0A2C9V0A6|A0A2C9V0A6_MANES1.4e-0526.06Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G109000 PE=4 SV=... [more]
tr|A0A1S2YBM3|A0A1S2YBM3_CICAR5.3e-0533.07histone-lysine N-methyltransferase SETD1A OS=Cicer arietinum OX=3827 GN=LOC10151... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000250.1CsaV3_1G000250.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..172

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G000250CSPI01G00260Wild cucumber (PI 183967)cpicucB001
CsaV3_1G000250Cucsa.157070Cucumber (Gy14) v1cgycucB236
CsaV3_1G000250CmaCh10G000360Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G000250CmoCh10G000320Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G000250Carg10258Silver-seed gourdcarcucB0395
CsaV3_1G000250Cla019305Watermelon (97103) v1cucwmB105
CsaV3_1G000250MELO3C026179Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G000250ClCG06G018170Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G000250Lsi06G016660Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G000250MELO3C026179.2Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G000250Cla97C06G127950Watermelon (97103) v2cucwmbB076
CsaV3_1G000250Bhi02G000489Wax gourdcucwgoB087
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G000250Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G000250Cucumber (Chinese Long) v3cuccucB017
CsaV3_1G000250Silver-seed gourdcarcucB0643
CsaV3_1G000250Cucumber (Gy14) v2cgybcucB002
CsaV3_1G000250Cucumber (Gy14) v2cgybcucB010
CsaV3_1G000250Cucumber (Gy14) v2cgybcucB101
CsaV3_1G000250Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G000250Cucurbita maxima (Rimu)cmacucB0117
CsaV3_1G000250Cucurbita maxima (Rimu)cmacucB0256
CsaV3_1G000250Cucurbita maxima (Rimu)cmacucB0472
CsaV3_1G000250Cucurbita moschata (Rifu)cmocucB0243
CsaV3_1G000250Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G000250Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G000250Cucurbita moschata (Rifu)cmocucB0470
CsaV3_1G000250Cucurbita pepo (Zucchini)cpecucB0029
CsaV3_1G000250Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G000250Cucurbita pepo (Zucchini)cpecucB0630
CsaV3_1G000250Cucurbita pepo (Zucchini)cpecucB0804
CsaV3_1G000250Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G000250Wild cucumber (PI 183967)cpicucB014
CsaV3_1G000250Wild cucumber (PI 183967)cpicucB126
CsaV3_1G000250Bottle gourd (USVL1VR-Ls)cuclsiB039
CsaV3_1G000250Melon (DHL92) v3.5.1cucmeB019
CsaV3_1G000250Melon (DHL92) v3.5.1cucmeB084
CsaV3_1G000250Melon (DHL92) v3.6.1cucmedB017
CsaV3_1G000250Melon (DHL92) v3.6.1cucmedB077
CsaV3_1G000250Watermelon (Charleston Gray)cucwcgB056
CsaV3_1G000250Watermelon (97103) v1cucwmB032
CsaV3_1G000250Watermelon (97103) v2cucwmbB048
CsaV3_1G000250Wax gourdcucwgoB062