CmaCh09G010220 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G010220
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RNA-binding family protein
Location	Cma_Chr09 : 5251076 .. 5254849 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCGTTATCCTCTTCCAATTTGGAAACATTATAAAAACCCTAAATCGACGATCCTTTTTCTTCGTCTCCACCGTGTTATCGATCTTCTTCGACAGCGGAAGAAAAGTTCAGCCGGTGGCCAAATTTCTGATGGCGTCCAAATCGAAGAGCGAAAACCCTCACACGGGTGATGGCGCTAGTCCCGGGTTTGTGTCTGTGCCTTTCTCGATTGATTTACGTTCGGTGTTTCTCTGAGAAAGTTTCGAGTTGGGGCTTTTAAGCACCAGATTTTAATTACTATATGCCTTCCCCTGTTTACGCCTGCTAGTCGGTTCCTTTGTCTCAATTTATTTAGATCTTGATTTTGTGTTCTCATTTTTTTTTTTTTTTTTGTTGCTATTTTTGTTTTTCCCAGGAAGATTTTCATTGGAGGATTGGCGAAAGATACAACTTACAGTGAGTTCTTGTTTACTTTTAATTATAAATTTTGTTCGTAGGATTGGAGTTTCTGTAAGTGTGCTTAATTCTGCTGAAAATGCCTGTTTTTCTTGATGGGTGTTATTTTTTGTATGGCATGTTAAGGAAATTTTCTATGTGCTTTAGCAGTTGTTTTTACTTCAACTATATCTGTTGAAGAGCTTATTAAATGAGTTTTTTGTTTGCTAAGTCTGTAAGTTAATTAAGTGCAATGTTAGTTTAAATCCGACGTAGCTGATGTTCTTTTCATTGTGTTTTTGTAAAAAACAGCTCAATTCAACAAGCATTTTGGGACGTATGGAGAGATAACTGACTCGGTGATCATGAAAGATCGGTATACGGGACAGCCAAGAGGTTTTGGGTTTATCACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACATGTCATCAATGGGAAACAAGTTCGTGATCCTATTTGTTTTGTTTTTCTTACTGGATTACCAAACATTCTATTCCACTTGATTGTTAAATGGCGTTTAAATTTATTTGCTTTCCATGGTCTTTAAGATTAATTAGGAGTCCTTTTCCGAACTCTGTTGGTTGGTTAATATTTTTTTTCTTTGCTACCCCCCACGCTTTCGTCTTTCATGGTACATTTGTAATATGATCTGTTGTTGCATAAATTTAGGATTCAATTATTTTCTTTTTTTCTATACCTGTGACTTACTTTGGTATATGGAAGTAGGTTGAAATAAAGAGAACCATCCCTAAAGGACATGGTCAGTCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACAGTTACTGAAGGTAGGGTACCAATATTTGTTATATTTCTATACCTGTGACTTACTTTGGTATATTTGCATGTTTTCTTTAATTGGTGGTACCAATATTTGTATCATTCATTTTTTTTCGTCTTCTCATATGTCTTGCTTGTAGATGAGTTTAAACATTTATTTTCCTAATTTATTCATTTTTCTCATATTGTGGTAGTTTATATGTTGTGTGTTTAATCTGGCTATTACATTTCTTGCTTGTAGACGAGTTTAATCATTTCTTTTCCAAGTATGGGAAAGTCGCGGAACACCAAATTATACGTGACCATGAAACCAACCGCTCGCGAGGCTTTGGATTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTATCCAATGGAAATATGATAGATATGTCTGGTACCCAGGTGAGCTTATATCAATGGAATGCAAGTGAGCAGAGTGTAAACAGAATTCTGTTTCCCATGAATTTTACACCGCCATATTCTCCAGTTTTAATAATAATGGACGATTTTCAACCTTTTCATTCTATACAAATGTACCTTTTAAGCATTATGCTGTTAGTCATGTCTTTTCTATACTAGTTTTAGGTGGAGGTTATTACAGGTATAGATCTTCTAAGGCAAGGGCTATCAGAATAGTTAAATTTTGGAAGATTTAGGTTGACTAAGTTACTTTCTTGTAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTTCTGCATATGGTAGCAATTCTAGGTCTCGTTCATTCAATGATGGCTTTGGTGGATATGGAAGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACCCCAGGTGGTCTTGGTGGTAGGATAGGGAGCGGGTATGGTTATGGCAGTAGTGGTGATTTTGGCGGAGGTTATGGAGGTTTTGGAGGCAATAGCTTAGGTGGCTACCGAGGTGAATTGTCCCTTGGTTATTCTAGTAGATTTGGACCTTACAGTGGTGGTTTTGGTGGGGGATATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAAGTTCCAGTTATGGTGGAGGTTACGACTCCGGTCCTGGTGCTAGTTATGGAGGAGCAAGTGGTCTGTATGGAAGGGGAGGCTATAGTGGGGGTAGTCGATATCATCCTTACTCAAGGTAGAATCATTGCATAGTCAGTACCATCCATCCCTTTGCAAGCTAGTAAAGAAGTCTCACTCCATTGCTCTCTTGCTTAGATTTGCCATAGAGTCTTCAATCACAGGTTCCTATAGTTTCGTGGCCCAGTAATAAGCGGTTCTCACAAATACTAGACGTCCCAAGGAAGCTATTTAAAGACCCGAAGAGTGTATTAGACATTTTAATGTATGGTTTTTAGACACTATAATGTAGAGACTACTATGGTTATCCCGATCTAGTACGATTTTAATTTAGCGTGCCATGGTGTAGGCTTTAGCATATACTTTTTCTTGGCTGTGTTTATTCCTCACATTAGTTCAATATATAGATAGATTTTTTATGTTCGATAAACATGCTCTAGTTTCCGCTCGTACTTTAGTTTGTCGATGATAAGACTGTTGGTAGGAGAAAAAAACTCCTAGCTCTACTAGTTTAGAGGATTGTTTCGGGGAGGGAGCAGATCGCTTGTATCGATATGTTGATTCTACTAGCTTAGACGCCTCTGTATAGAGGTCATATGTTGATTAGAAAGGTCTTGTATTTTTTGGTATTGAGATAAATTTATGCTTAACTGGTTTTTTTTTTGATGATTTTGTTACTATCCTGTGTGTGTATGATGAACAAGAAGTTATTGGAAAACTGGAAATAATTTGGTTTTGAGTGAGAAAAGTTGAATACTCCTATTGACTGAACTCTGCTGAAGAAGCTGAACTCTGGTGGTTGCCTCCCTTGTGGATTTCTGGAGTGTCATTGAAGCTATAGGGCAGCTATCACTGTTGGAGCGATTGTTCGGCTGAGTACTCCCCGTCTGCGTATCTCACACTCCCAAAGCTGATTTTGGTTTTCATCTCCTGCATTTTTCTTTTGAGATATAGGTCGGCTTTGTGCATCTCGATGTTTGCTGGGGGTGCTCCTAAAGGAATGCCCTTCCGGTACGTTCTCTTCTCTGTCTTTTCCATCCGTATCAAAAATCTCTCTTCGCAATGCAATATATCAGTCTCTTTCGCTATTAAGCCTACGCCCATTCCTTTCAAGCTTGATTCCGTCCTTAGACTCGTTATGCTGTTCGACTGAACTCGTTGTCTCTGCGCTCTATTTGGTTGGAACCCGGTTTGATAACCTTCTTTCATAGATTTCCTTTGCCAAGTTATCGCTAGTAATCTTTTACTCTTGTATGTCTTCTTTTGCAATTTTGTAAGTTACAGTGCAGTTGAAATGTTTGTATATAATATATTGATTTGTAATTTATTATTGACCAAATTGCTTTTGTATATAATATATGTTGGGC

mRNA sequence

AGTCGTTATCCTCTTCCAATTTGGAAACATTATAAAAACCCTAAATCGACGATCCTTTTTCTTCGTCTCCACCGTGTTATCGATCTTCTTCGACAGCGGAAGAAAAGTTCAGCCGGTGGCCAAATTTCTGATGGCGTCCAAATCGAAGAGCGAAAACCCTCACACGGGTGATGGCGCTAGTCCCGGGAAGATTTTCATTGGAGGATTGGCGAAAGATACAACTTACACTCAATTCAACAAGCATTTTGGGACGTATGGAGAGATAACTGACTCGGTGATCATGAAAGATCGGTATACGGGACAGCCAAGAGGTTTTGGGTTTATCACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACATGTCATCAATGGGAAACAAGTTGAAATAAAGAGAACCATCCCTAAAGGACATGGTCAGTCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACAGTTACTGAAGACGAGTTTAATCATTTCTTTTCCAAGTATGGGAAAGTCGCGGAACACCAAATTATACGTGACCATGAAACCAACCGCTCGCGAGGCTTTGGATTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTATCCAATGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTTCTGCATATGGTAGCAATTCTAGGTCTCGTTCATTCAATGATGGCTTTGGTGGATATGGAAGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACCCCAGGTGGTCTTGGTGGTAGGATAGGGAGCGGGTATGGTTATGGCAGTAGTGGTGATTTTGGCGGAGGTTATGGAGGTTTTGGAGGCAATAGCTTAGGTGGCTACCGAGGTGAATTGTCCCTTGGTTATTCTAGTAGATTTGGACCTTACAGTGGTGGTTTTGGTGGGGGATATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAAGTTCCAGTTATGGTGGAGGTTACGACTCCGGTCCTGGTGCTAGTTATGGAGGAGCAAGTGGTCTGTATGGAAGGGGAGGCTATAGTGGGGGTAGTCGATATCATCCTTACTCAAGGTAGAATCATTGCATAGTCAGTACCATCCATCCCTTTGCAAGCTAGTAAAGAAGTCTCACTCCATTGCTCTCTTGCTTAGATTTGCCATAGAGTCTTCAATCACAGGTTCCTATAGTTTCGTGGCCCAGTAATAAGCGGTTCTCACAAATACTAGACGTCCCAAGGAAGCTATTTAAAGACCCGAAGAGTGTATTAGACATTTTAATGTATGGTTTTTAGACACTATAATGTAGAGACTACTATGGTTATCCCGATCTAGTACGATTTTAATTTAGCGTGCCATGGTGTAGGCTTTAGCATATACTTTTTCTTGGCTGTGTTTATTCCTCACATTAGTTCAATATATAGATAGATTTTTTATGTTCGATAAACATGCTCTAGTTTCCGCTCGTACTTTAGTTTGTCGATGATAAGACTGTTGGTAGGAGAAAAAAACTCCTAGCTCTACTAGTTTAGAGGATTGTTTCGGGGAGGGAGCAGATCGCTTGTATCGATATGTTGATTCTACTAGCTTAGACGCCTCTGTATAGAGGTCATATGTTGATTAGAAAGGTCTTGTATTTTTTGGTATTGAGATAAATTTATGCTTAACTGGTTTTTTTTTTGATGATTTTGTTACTATCCTGTGTGTGTATGATGAACAAGAAGTTATTGGAAAACTGGAAATAATTTGGTTTTGAGTGAGAAAAGTTGAATACTCCTATTGACTGAACTCTGCTGAAGAAGCTGAACTCTGGTGGTTGCCTCCCTTGTGGATTTCTGGAGTGTCATTGAAGCTATAGGGCAGCTATCACTGTTGGAGCGATTGTTCGGCTGAGTACTCCCCGTCTGCGTATCTCACACTCCCAAAGCTGATTTTGGTTTTCATCTCCTGCATTTTTCTTTTGAGATATAGGTCGGCTTTGTGCATCTCGATGTTTGCTGGGGGTGCTCCTAAAGGAATGCCCTTCCGGTACGTTCTCTTCTCTGTCTTTTCCATCCGTATCAAAAATCTCTCTTCGCAATGCAATATATCAGTCTCTTTCGCTATTAAGCCTACGCCCATTCCTTTCAAGCTTGATTCCGTCCTTAGACTCGTTATGCTGTTCGACTGAACTCGTTGTCTCTGCGCTCTATTTGGTTGGAACCCGGTTTGATAACCTTCTTTCATAGATTTCCTTTGCCAAGTTATCGCTAGTAATCTTTTACTCTTGTATGTCTTCTTTTGCAATTTTGTAAGTTACAGTGCAGTTGAAATGTTTGTATATAATATATTGATTTGTAATTTATTATTGACCAAATTGCTTTTGTATATAATATATGTTGGGC

Coding sequence (CDS)

ATGGCGTCCAAATCGAAGAGCGAAAACCCTCACACGGGTGATGGCGCTAGTCCCGGGAAGATTTTCATTGGAGGATTGGCGAAAGATACAACTTACACTCAATTCAACAAGCATTTTGGGACGTATGGAGAGATAACTGACTCGGTGATCATGAAAGATCGGTATACGGGACAGCCAAGAGGTTTTGGGTTTATCACTTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACATGTCATCAATGGGAAACAAGTTGAAATAAAGAGAACCATCCCTAAAGGACATGGTCAGTCAAAGGATTTTAAGACGAAGAAGATATTTGTTGGTGGGATTCCATCAACAGTTACTGAAGACGAGTTTAATCATTTCTTTTCCAAGTATGGGAAAGTCGCGGAACACCAAATTATACGTGACCATGAAACCAACCGCTCGCGAGGCTTTGGATTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTATCCAATGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTTCTGCATATGGTAGCAATTCTAGGTCTCGTTCATTCAATGATGGCTTTGGTGGATATGGAAGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACCCCAGGTGGTCTTGGTGGTAGGATAGGGAGCGGGTATGGTTATGGCAGTAGTGGTGATTTTGGCGGAGGTTATGGAGGTTTTGGAGGCAATAGCTTAGGTGGCTACCGAGGTGAATTGTCCCTTGGTTATTCTAGTAGATTTGGACCTTACAGTGGTGGTTTTGGTGGGGGATATGGCACAAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAAGTTCCAGTTATGGTGGAGGTTACGACTCCGGTCCTGGTGCTAGTTATGGAGGAGCAAGTGGTCTGTATGGAAGGGGAGGCTATAGTGGGGGTAGTCGATATCATCCTTACTCAAGGTAG

Protein sequence

MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTEDEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIGSGYGYGSSGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR

Homology

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BLAST of CmaCh09G010220 vs. Swiss-Prot
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.2e-39
Identity = 130/359 (36.21%), Postives = 189/359 (52.65%), Query Frame = 1


Query: 19  GKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF  YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGHGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 FNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKK 198
           F  +F  YG V +  I+ D  TNR RGFGF+ F+ E+ VD +L +    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIGSG 258
           A P K +NP      G  S     + G+ GYG +   +D       F     +G  + S 
Sbjct: 186 ALP-KDANP----GGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPS- 245

Query: 259 YGYGSSGDFGGGYG-GFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGV 318
             YGSSG +G GYG G  G   G Y      GY+   G Y  G   GYG + + G G G 
Sbjct: 246 --YGSSG-YGAGYGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGYGATNIPGAGYGS 305

Query: 319 -------DGYGSYGSSSYGG-GYDSGPGASYGGASGL--------------YGRGGYSG 339
                  + + +  SS YG  GY SG   S  G  G               YG GGYSG
Sbjct: 306 STGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSG 349

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BLAST of CmaCh09G010220 vs. Swiss-Prot
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.4e-36
Identity = 85/219 (38.81%), Postives = 129/219 (58.90%), Query Frame = 1


Query: 3   SKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGF 62
           +++K E           K+FIGGL  DTT     ++FG YG +TD  IMKD  TG+ RGF
Sbjct: 143 TQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGF 202

Query: 63  GFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTEDE 122
           GF+++  PS VD+V++  H+++GK ++ KR IP+     +  KT KIFVGGI   V   E
Sbjct: 203 GFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPR----DEQDKTGKIFVGGIGPDVRPKE 262

Query: 123 FNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKK 182
           F  FFS++G + + Q++ D +T +SRGFGF+ ++  + VD +  N   ID    ++EIK+
Sbjct: 263 FEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN-KFIDFKDRKIEIKR 322

Query: 183 AEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFD 222
           AEP+       +S  G N+   + N   G +G+  GDF+
Sbjct: 323 AEPRHMQQ--KSSNNGGNNGGNNMNRRGGNFGNQ-GDFN 353

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BLAST of CmaCh09G010220 vs. Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.8e-34
Identity = 74/191 (38.74%), Postives = 115/191 (60.21%), Query Frame = 1


Query: 3   SKSKSENPHTGDGASP-----GKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTG 62
           S +   N    +  SP     GK+FIGGL  +TT      +F  +GE+ D  +M+D  TG
Sbjct: 142 SGAMESNEDNAEETSPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTG 201

Query: 63  QPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPST 122
           + RGFGF+T+ +P  V++V+   H ++GK ++ KR IP+     +  KT K+FVGG+P  
Sbjct: 202 RSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPR----EEQEKTAKMFVGGVPGD 261

Query: 123 VTEDEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQ 182
            TE+EF +FF+++G+V +  ++ D +T R RGFGF+ +E E  V+  +S    I + G  
Sbjct: 262 CTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQ-PYITIHGKP 321

Query: 183 VEIKKAEPKKS 189
           VE+K+A PK S
Sbjct: 322 VEVKRATPKAS 327

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BLAST of CmaCh09G010220 vs. Swiss-Prot
Match: RBP1_ARATH (RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.3e-32
Identity = 68/194 (35.05%), Postives = 113/194 (58.25%), Query Frame = 1


Query: 20  KIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
           K+F+GG+AK+T+     ++F  YG + ++V+ K++ TG+PRGFGF+ +A+   V K + D
Sbjct: 7   KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66

Query: 80  THVINGKQVEIKRTIPKGHGQSKDF--------------------------KTKKIFVGG 139
           TH I GK V++++ I K     + F                          +TKKIFVGG
Sbjct: 67  THFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTKKIFVGG 126

Query: 140 IPSTVTEDEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDM 188
           + S  TE+EF  +F ++G+  +  ++ D  TNR RGFGF+ ++ E+ V E++   N  ++
Sbjct: 127 LSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSV-EVVMQSNFHEL 186

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BLAST of CmaCh09G010220 vs. Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 9.5e-32
Identity = 106/287 (36.93%), Postives = 140/287 (48.78%), Query Frame = 1


Query: 19  GKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GGL   TT      +F  YGE+ D VIMKD+ T Q RGFGF+ + DP+ V  V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 79  D-THVINGKQVEIKRTIPKG--------------HGQSKDFKTKKIFVGGIPSTVTEDEF 138
              H ++G+ ++ K   P+G                +S   K+ KIFVGGIP    E E 
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 129

Query: 139 NHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKKA 198
             +F K+G V E  +I D E  R RGFGFI FE+E+ VD+ + N +  D+ G +VE+K+A
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVEVKRA 189

Query: 199 EPKKSSNPPP----ASAYGSNSRSRSFNDGFG--------GYG------------SSYGD 257
           EP+ S N  P    AS +GS     + N   G        GYG              YG 
Sbjct: 190 EPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGP 249

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BLAST of CmaCh09G010220 vs. TrEMBL
Match: A0A0A0K3W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278740 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 3.6e-179
Identity = 327/347 (94.24%), Postives = 333/347 (95.97%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKG GQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF HFFSKYGK+ EHQIIRDHETNRSRGFGFIVFEEEEVVDEILS GNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKKSSNP PA AYGSNSR+R+FNDGFGGYG SYGDFDAGFGPGPFR PGG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSSGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGS GDFGGGYGGFGGNSLGGYRG+ SLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           VDGYGSYGSS YGGGYDSGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

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BLAST of CmaCh09G010220 vs. TrEMBL
Match: A5APB9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00920 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 6.2e-163
Identity = 299/348 (85.92%), Postives = 322/348 (92.53%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           M SKSKS+NPHTGDGASPGKIFIGGLAKDTTY  FNKHFG YG+ITDSVIMKDRYTGQPR
Sbjct: 1   MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVD+VIEDTHVINGKQVEIKRTIPKG GQSKDFKTKKIFVGG+PSTVTE
Sbjct: 61  GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF +FFSKYGKV EHQIIRDHETNRSRGFGFI+F+ EEVVDE++S GNMIDM+GTQVEI
Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKK+SNPPPA AYGSNSR+RSF+DGFGG+GSSYG FD+GFGPGP+RTPGG+GGR+G
Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSGFGPGPYRTPGGVGGRLG 240

Query: 241 SGYGYGSSG-DFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGR 300
              GYGSSG +FGGGYGGFG +SLGGYRGE SLGYSSRFGPY GGF GGYG SGLGGYGR
Sbjct: 241 GYGGYGSSGSEFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYGGGFSGGYGGSGLGGYGR 300

Query: 301 GVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G +GYG+YG S Y GGYDSGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 GGEGYGNYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348

[Close]

BLAST of CmaCh09G010220 vs. TrEMBL
Match: A0A067KWH0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01070 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.7e-160
Identity = 297/348 (85.34%), Postives = 317/348 (91.09%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           M SKSKSENPH+GDGASPGKIFIGGLAKDTTY  FNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MGSKSKSENPHSGDGASPGKIFIGGLAKDTTYATFNKHFGKYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVD+VIEDTH+INGKQVEIKRTIPKG GQSKDFKTKKIFVGGIPS+VTE
Sbjct: 61  GFGFITYADPSVVDQVIEDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF +FFSKYGKV EHQIIRDHETNRSRGFGFI+F+ EEVVDE+LS GNMIDM+GTQVEI
Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMLSKGNMIDMAGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKK+SNPPPA AYGSNSRSRS+NDGFGG+G SYG FD GF PGP+R PGGLGGR+G
Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRSRSYNDGFGGFGGSYGGFDGGFAPGPYRNPGGLGGRLG 240

Query: 241 SGYGYGSS-GDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGR 300
            GYGYGSS GDFGG YG FGG+SLGGYRGE +LGYS RFGPY GGFGG YG SGLG YGR
Sbjct: 241 -GYGYGSSGGDFGGSYGSFGGSSLGGYRGESALGYSGRFGPYGGGFGGSYGGSGLGSYGR 300

Query: 301 GVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G +GYGSYG + YGG Y+SGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 GGEGYGSYGGAGYGGSYESGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]

BLAST of CmaCh09G010220 vs. TrEMBL
Match: A0A067EVW0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018875mg PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.7e-160
Identity = 294/348 (84.48%), Postives = 314/348 (90.23%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           M SKSKS+NPHTGDGASPGKIFIGGL KDTTY  FNKHFG YG+ITDSVIMKDRYTGQPR
Sbjct: 1   MGSKSKSDNPHTGDGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTH+INGKQVEIKRTIPKG GQSKDFKTKKIFVGGIPS+V+E
Sbjct: 61  GFGFITYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DE  +FFSKYGKV EHQIIRDHETNRSRGFGF++F+ EEVVDE+LS GNMIDM+GTQVEI
Sbjct: 121 DELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKKSSNPPP  +Y SNSR RSFNDGFGG+GSSYG FD GFGPGP+RTP GLGGR+G
Sbjct: 181 KKAEPKKSSNPPPPPSYASNSRGRSFNDGFGGFGSSYGGFDGGFGPGPYRTPAGLGGRLG 240

Query: 241 SGYGYGSS-GDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGR 300
            GYGYGSS G++GGGYGGFGG+SLGGYRGE SLGYS RFGPY GGFG  YG SGLGGYGR
Sbjct: 241 GGYGYGSSGGEYGGGYGGFGGSSLGGYRGEPSLGYSGRFGPYGGGFGSSYGGSGLGGYGR 300

Query: 301 GVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G +GYGSYG S YGGGYDSGPG SYG   GLYGRGGYSG SRYHPY+R
Sbjct: 301 GGEGYGSYGGSGYGGGYDSGPGTSYGAGGGLYGRGGYSGSSRYHPYAR 348

[Close]

BLAST of CmaCh09G010220 vs. TrEMBL
Match: B9S9X4_RICCO (Heterogeneous nuclear ribonucleoprotein A1, putative OS=Ricinus communis GN=RCOM_0523280 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.4e-159
Identity = 294/348 (84.48%), Postives = 315/348 (90.52%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           MASKSKS+NPH+GDGASPGKIFIGGLAKDTTY  FNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSDNPHSGDGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVI+GKQVEIKRTIPKG GQSKDFKTKKIFVGGIPS+VTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF  FFSKYG+V EHQIIRDHETNRSRGFGFI+F+ EE VDE+LSNGNMIDM+GTQVEI
Sbjct: 121 DEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKK+SNPPPA +YGSNSR RS+ND +GG+G SYG FD GFGPGP+RTPG LGGR+ 
Sbjct: 181 KKAEPKKASNPPPAPSYGSNSRGRSYNDSYGGFGGSYGGFDGGFGPGPYRTPGSLGGRLS 240

Query: 241 SGYGYGS-SGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGR 300
           S YGYGS  GDFGG YG FGG+SLGGYRGE SLGYS RFGPY GGFGGGYG SGLGGYG 
Sbjct: 241 SAYGYGSGGGDFGGSYGSFGGSSLGGYRGESSLGYSGRFGPYGGGFGGGYGGSGLGGYGS 300

Query: 301 GVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G +GYGSYG + YGGGY+SG GASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 GGEGYGSYGGTGYGGGYESGAGASYGGAGGLYGRGGYSGSSRYHPYAR 348

[Close]

BLAST of CmaCh09G010220 vs. TAIR10
Match: AT3G13224.2 (AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 442.2 bits (1136), Expect = 3.0e-124
Identity = 255/360 (70.83%), Postives = 279/360 (77.50%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFG YGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQV 180
           TEDE   FF+KYG V EHQ+IRDHETNRSRGFGF++F+ EEVVDE+LS GNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFG--PGPFRTPGGLG 240
           EIKKAEPKKS N  P S YGS+ R RS ND +  YG  YG FD G+G  PGP R+ GG  
Sbjct: 181 EIKKAEPKKSLNRSPPS-YGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPA 240

Query: 241 GRIGSGYGYGSSG---DFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGG-GYGTS 300
            R   GYGYG      +FGGGY  +GG SLGGYR E  LGYSSRFGPY  GFGG GYG  
Sbjct: 241 SRYAGGYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRG 300

Query: 301 GLG---GYGR-GVDGYGSYGSSSYGGGYDS-GPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G G   GY R G +GYG YG   YGG Y+S GPG SY GA G YGR GYS  SRYHPY+R
Sbjct: 301 GEGAYLGYPRGGGEGYGGYGGPGYGGAYESGGPGGSYEGAGGPYGR-GYSSSSRYHPYAR 358

[Close]

BLAST of CmaCh09G010220 vs. TAIR10
Match: AT5G40490.1 (AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 322.4 bits (825), Expect = 3.4e-88
Identity = 204/347 (58.79%), Postives = 242/347 (69.74%), Query Frame = 1


Query: 10  PHTGDGA-SPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYA 69
           PH+G G  S GKIF+GGLA++TT  +F KHFG YGEITDSVIMKDR TGQPRGFGF+TYA
Sbjct: 32  PHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYA 91

Query: 70  DPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTEDEFNHFFS 129
           D SVVDKVI+D H+I GKQVEIKRTIP+G   S DFKTKKIFVGGIPS+V +DEF  FF 
Sbjct: 92  DSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFM 151

Query: 130 KYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKKAEPKKS 189
           ++G++ EHQI+RDH T RSRGFGF+ +E E++VD +L+ GN I++SGTQVEIKKAEPKK 
Sbjct: 152 QFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKP 211

Query: 190 SNPPPASAYGSNSRSRSFNDGFG-GYGSSYGDFDAGFGPGPFRTPGGLGGRIGSGYGYGS 249
           ++    S    +SRS +F  G+G GYG  +G    G G GP+++ GG GG    GYG G 
Sbjct: 212 NSVTTPSKRFGDSRS-NFGGGYGDGYGGGHGGGYGGPG-GPYKSGGGYGGGRSGGYG-GY 271

Query: 250 SGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFG-GGYGTSGLGGYGRGV-DGY- 309
            G+FGG  GG  G  +G YRGE +LGYS R+G   GG+  GGY   G GGYG G  D Y 
Sbjct: 272 GGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMYG 331

Query: 310 GSYG---------SSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRY 343
           GSYG         S SYGGGY S     YGG  G  G GGY GG  Y
Sbjct: 332 GSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGGAGGGGYRGGGGY 375

[Close]

BLAST of CmaCh09G010220 vs. TAIR10
Match: AT1G17640.1 (AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 195.3 bits (495), Expect = 6.3e-50
Identity = 139/350 (39.71%), Postives = 194/350 (55.43%), Query Frame = 1


Query: 16  ASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDK 75
           +SPGK+F+GG++ +TT   F  +FG +GE+ DSVIM DR TG PRGFGF+T+AD +V +K
Sbjct: 63  SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122

Query: 76  VIEDTHVINGKQVEIKRTIPKGHGQS---KDFKTKKIFVGGIPSTVTEDEFNHFFSKYGK 135
           V+E+ HVI+ ++V++KRT+P+G   +      KT+KIFVGG+P  + EDE  ++F  YG 
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGD 182

Query: 136 VAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKKAEPKKSSNPP 195
           + EHQI+ DH T RSRGFGF+ F+ E+ VD + S+G + ++   QVEIK+AEPK++    
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDN 242

Query: 196 PASAYGSNSR-------------SRSFNDGFGGYGSSYGDF--DAGFGPGPFRTPGGLGG 255
              +YG++ +               S   G+GGYG  YG +  ++   P  F    G GG
Sbjct: 243 SFRSYGASGKYDQEDSYSGKANEDYSMYSGYGGYG-GYGAYAGNSMVNPAGFY---GYGG 302

Query: 256 RIGSGYGYGSSGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGY 315
             G GYGYG    F  GYG       GGY                   G GYG +    Y
Sbjct: 303 GYGYGYGYGGQ-MFNMGYGA------GGY----------------SHMGSGYGVAAAAAY 362

Query: 316 GRGVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G         G  S+G G +   G+S G  +G  G    SG  RYHPY +
Sbjct: 363 G---------GGKSHGNGNN---GSSSGKGNGTNG----SGPDRYHPYQK 369

[Close]

BLAST of CmaCh09G010220 vs. TAIR10
Match: AT4G14300.1 (AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 162.9 bits (411), Expect = 3.5e-40
Identity = 130/359 (36.21%), Postives = 189/359 (52.65%), Query Frame = 1


Query: 19  GKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF  YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGHGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 FNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKK 198
           F  +F  YG V +  I+ D  TNR RGFGF+ F+ E+ VD +L +    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIGSG 258
           A P K +NP      G  S     + G+ GYG +   +D       F     +G  + S 
Sbjct: 186 ALP-KDANP----GGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPS- 245

Query: 259 YGYGSSGDFGGGYG-GFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGV 318
             YGSSG +G GYG G  G   G Y      GY+   G Y  G   GYG + + G G G 
Sbjct: 246 --YGSSG-YGAGYGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGYGATNIPGAGYGS 305

Query: 319 -------DGYGSYGSSSYGG-GYDSGPGASYGGASGL--------------YGRGGYSG 339
                  + + +  SS YG  GY SG   S  G  G               YG GGYSG
Sbjct: 306 STGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSG 349

[Close]

BLAST of CmaCh09G010220 vs. TAIR10
Match: AT2G33410.1 (AT2G33410.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 155.6 bits (392), Expect = 5.5e-38
Identity = 132/355 (37.18%), Postives = 193/355 (54.37%), Query Frame = 1


Query: 19  GKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+FIGG++ DT      ++F  +GE+    +M+++ TG+PRGFGF+ ++DP+V+D+V++
Sbjct: 6   GKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI------PKGH----GQSKDF------KTKKIFVGGIPSTVTEDE 138
           D H I+ + V++KR +      P G       S++F      +TKKIFVGG+P  +T DE
Sbjct: 66  DKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDE 125

Query: 139 FNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEIKK 198
           F  +F  YG V++  I+ D  T R RGFGF+ F+ E+ VD +L +    D++G QVE+K+
Sbjct: 126 FRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVL-HKTFHDLNGKQVEVKR 185

Query: 199 AEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSS--YGDFDAGFGPGPFRTPGGL----G 258
           A P K +NP  AS  G  S       G+GG G S   G  D+     P  T  G     G
Sbjct: 186 ALP-KDANPGIASGGGRGSGGAGGFPGYGGSGGSGYEGRVDSNRYMQPQNTGSGYPPYGG 245

Query: 259 GRIGSGYGYGSSGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGG 318
              G+GYGYGS+G   GG+GG+ GN  G   G  S+             G G+G+     
Sbjct: 246 SGYGTGYGYGSNGVGYGGFGGY-GNPAGAPYGNPSVP------------GAGFGSGPRSS 305

Query: 319 YG-RGVDGYGS--YGSSSYGGGYDSGPGAS---YGGASGLYGRGGYSGGSRYHPY 346
           +G +   GYG+  YG+++  GG   GPG++     GAS  YG  GY  G     Y
Sbjct: 306 WGAQAPSGYGNVGYGNAAPWGG-SGGPGSAVMGQAGASAGYGSQGYGYGGNDSSY 344

[Close]

BLAST of CmaCh09G010220 vs. NCBI nr
Match: gi|659126124|ref|XP_008463022.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo])

HSP 1 Score: 636.7 bits (1641), Expect = 2.3e-179
Identity = 328/347 (94.52%), Postives = 333/347 (95.97%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKG GQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF HFFSKYGK+ EHQIIRDHETNRSRGFGFIVFEEEEVVDEILS GNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKKSSNP PA AYGSNSR+RSFNDGFGGYG SYGDFDAGFGPGPFR PGG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSSGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGS GDFGGGYGGFGGNSLGGYRG+ SLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           VDGYGSYGSS YGGGYDSGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]

BLAST of CmaCh09G010220 vs. NCBI nr
Match: gi|449463368|ref|XP_004149406.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus])

HSP 1 Score: 635.6 bits (1638), Expect = 5.2e-179
Identity = 327/347 (94.24%), Postives = 333/347 (95.97%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKG GQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF HFFSKYGK+ EHQIIRDHETNRSRGFGFIVFEEEEVVDEILS GNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKKSSNP PA AYGSNSR+R+FNDGFGGYG SYGDFDAGFGPGPFR PGG+GGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGSSGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYGS GDFGGGYGGFGGNSLGGYRG+ SLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           VDGYGSYGSS YGGGYDSGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]

BLAST of CmaCh09G010220 vs. NCBI nr
Match: gi|225461983|ref|XP_002271592.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Vitis vinifera])

HSP 1 Score: 581.6 bits (1498), Expect = 8.9e-163
Identity = 299/348 (85.92%), Postives = 322/348 (92.53%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           M SKSKS+NPHTGDGASPGKIFIGGLAKDTTY  FNKHFG YG+ITDSVIMKDRYTGQPR
Sbjct: 1   MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVD+VIEDTHVINGKQVEIKRTIPKG GQSKDFKTKKIFVGG+PSTVTE
Sbjct: 61  GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF +FFSKYGKV EHQIIRDHETNRSRGFGFI+F+ EEVVDE++S GNMIDM+GTQVEI
Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKK+SNPPPA AYGSNSR+RSF+DGFGG+GSSYG FD+GFGPGP+RTPGG+GGR+G
Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGSSYGGFDSGFGPGPYRTPGGVGGRLG 240

Query: 241 SGYGYGSSG-DFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGR 300
              GYGSSG +FGGGYGGFG +SLGGYRGE SLGYSSRFGPY GGF GGYG SGLGGYGR
Sbjct: 241 GYGGYGSSGSEFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYGGGFSGGYGGSGLGGYGR 300

Query: 301 GVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G +GYG+YG S Y GGYDSGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 GGEGYGNYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348

[Close]

BLAST of CmaCh09G010220 vs. NCBI nr
Match: gi|1009111463|ref|XP_015901084.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba])

HSP 1 Score: 576.2 bits (1484), Expect = 3.7e-161
Identity = 295/348 (84.77%), Postives = 316/348 (90.80%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           M SKSK++NPHTGDGASPGKIFIGGLAKDT Y  FNKHFG YGEI DSVIMKDR+TGQPR
Sbjct: 1   MGSKSKNDNPHTGDGASPGKIFIGGLAKDTNYATFNKHFGKYGEIVDSVIMKDRFTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKG GQSKDFKTKKIFVGGIPS+ TE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSSCTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF  FF+KYGKV EHQIIRDHETNRSRGFGFI+F+ EEVVDE+LS GNMIDM+GTQVEI
Sbjct: 121 DEFKSFFAKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDELLSKGNMIDMAGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKK+SNPPPA AYGSNSR+RSFNDGFGG+G SYG FD G+GPGP+RTP GLG R+G
Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRARSFNDGFGGFGGSYGGFDGGYGPGPYRTPAGLGSRLG 240

Query: 241 SGYGYGS-SGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGR 300
            GYGYGS SG+FGGGYG FG +SLGGYRGE SLGY+SR+GPY GGFGGGYG S LGGYGR
Sbjct: 241 GGYGYGSASGEFGGGYGSFGSSSLGGYRGESSLGYTSRYGPYGGGFGGGYGASSLGGYGR 300

Query: 301 GVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G +GYG YGSS YGGGYDSGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 GGEGYGGYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348

[Close]

BLAST of CmaCh09G010220 vs. NCBI nr
Match: gi|1009138621|ref|XP_015886683.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba])

HSP 1 Score: 575.5 bits (1482), Expect = 6.4e-161
Identity = 295/348 (84.77%), Postives = 316/348 (90.80%), Query Frame = 1


Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGTYGEITDSVIMKDRYTGQPR 60
           M SKSK++NPHTGDGASPGKIFIGGLAKDT Y  FNKHFG YGEI DSVIMKDR+TGQPR
Sbjct: 1   MGSKSKNDNPHTGDGASPGKIFIGGLAKDTNYATFNKHFGKYGEIVDSVIMKDRFTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGHGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKG GQSKDFKTKKIFVGGIPS+ TE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSSCTE 120

Query: 121 DEFNHFFSKYGKVAEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSNGNMIDMSGTQVEI 180
           DEF  FF+KYGKV EHQIIRDHETNRSRGFGFI+F+ EEVVDE+LS GNMIDM+GTQVEI
Sbjct: 121 DEFKSFFAKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDELLSKGNMIDMAGTQVEI 180

Query: 181 KKAEPKKSSNPPPASAYGSNSRSRSFNDGFGGYGSSYGDFDAGFGPGPFRTPGGLGGRIG 240
           KKAEPKK+SNPPPA AYGSNSR+RSFNDGFGG+G SYG FD G+GPGP+RTP GLG R+G
Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRARSFNDGFGGFGGSYGGFDGGYGPGPYRTPTGLGSRLG 240

Query: 241 SGYGYGS-SGDFGGGYGGFGGNSLGGYRGELSLGYSSRFGPYSGGFGGGYGTSGLGGYGR 300
            GYGYGS SG+FGGGYG FG +SLGGYRGE SLGY+SR+GPY GGFGGGYG S LGGYGR
Sbjct: 241 GGYGYGSASGEFGGGYGSFGSSSLGGYRGESSLGYTSRYGPYGGGFGGGYGASSLGGYGR 300

Query: 301 GVDGYGSYGSSSYGGGYDSGPGASYGGASGLYGRGGYSGGSRYHPYSR 348
           G +GYG YGSS YGGGYDSGPGASYGGA GLYGRGGYSG SRYHPY+R
Sbjct: 301 GGEGYGGYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348

The following BLAST results are available for this feature:

BLAST of CmaCh09G010220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNP1_ARATH	6.2e-39	36.21	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 S...	[more]
HRP1_YEAST	6.4e-36	38.81	Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain...	[more]
YHKF_SCHPO	7.8e-34	38.74	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]
RBP1_ARATH	3.3e-32	35.05	RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1	[more]
DAZP1_MOUSE	9.5e-32	36.93	DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2	[more]

BLAST of CmaCh09G010220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3W8_CUCSA	3.6e-179	94.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278740 PE=4 SV=1	[more]
A5APB9_VITVI	6.2e-163	85.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g00920 PE=4 SV=...	[more]
A0A067KWH0_JATCU	1.7e-160	85.34	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01070 PE=4 SV=1	[more]
A0A067EVW0_CITSI	1.7e-160	84.48	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018875mg PE=4 SV=1	[more]
B9S9X4_RICCO	1.4e-159	84.48	Heterogeneous nuclear ribonucleoprotein A1, putative OS=Ricinus communis GN=RCOM...	[more]

BLAST of CmaCh09G010220 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13224.2	3.0e-124	70.83	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G40490.1	3.4e-88	58.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G17640.1	6.3e-50	39.71	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G14300.1	3.5e-40	36.21	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	5.5e-38	37.18	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of CmaCh09G010220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126124\|ref\|XP_008463022.1\|	2.3e-179	94.52	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]	[more]
gi\|449463368\|ref\|XP_004149406.1\|	5.2e-179	94.24	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus]	[more]
gi\|225461983\|ref\|XP_002271592.1\|	8.9e-163	85.92	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Vitis vinifera]	[more]
gi\|1009111463\|ref\|XP_015901084.1\|	3.7e-161	84.77	PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba]	[more]
gi\|1009138621\|ref\|XP_015886683.1\|	6.4e-161	84.77	PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G010220.1	CmaCh09G010220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 109..171 score: 8.5E-16coord: 21..88 score: 5.6
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 108..181 score: 1.4E-18coord: 20..91 score: 1.3
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 19..95 score: 15.255coord: 107..185 score: 18
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 99..191 score: 2.2E-24coord: 5..98 score: 9.9
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 15..99 score: 7.52E-22coord: 104..214 score: 1.1
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 286..340 score: 1.1E-148coord: 1..229 score: 1.1E
None	No IPR available	PANTHER	PTHR24012:SF478	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJH23	coord: 1..229 score: 1.1E-148coord: 286..340 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G010220	Cucsa.240780	Cucumber (Gy14) v1	cgycmaB0671
CmaCh09G010220	Cla003326	Watermelon (97103) v1	cmawmB009
CmaCh09G010220	Csa7G278740	Cucumber (Chinese Long) v2	cmacuB045
CmaCh09G010220	MELO3C024961	Melon (DHL92) v3.5.1	cmameB014
CmaCh09G010220	ClCG09G021490	Watermelon (Charleston Gray)	cmawcgB007
CmaCh09G010220	CSPI07G11980	Wild cucumber (PI 183967)	cmacpiB047
CmaCh09G010220	CmoCh01G011070	Cucurbita moschata (Rifu)	cmacmoB048
CmaCh09G010220	CmoCh09G010250	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G010220	Lsi02G018140	Bottle gourd (USVL1VR-Ls)	cmalsiB018
CmaCh09G010220	Cp4.1LG02g00500	Cucurbita pepo (Zucchini)	cmacpeB046
CmaCh09G010220	Cp4.1LG06g08260	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G010220	MELO3C024961.2	Melon (DHL92) v3.6.1	cmamedB019
CmaCh09G010220	CsaV3_7G023900	Cucumber (Chinese Long) v3	cmacucB0056
CmaCh09G010220	Cla97C09G182880	Watermelon (97103) v2	cmawmbB048
CmaCh09G010220	Bhi09G001499	Wax gourd	cmawgoB0027
CmaCh09G010220	CsGy7G011160	Cucumber (Gy14) v2	cgybcmaB891
CmaCh09G010220	Carg24748	Silver-seed gourd	carcmaB0601
CmaCh09G010220	Carg23341	Silver-seed gourd	carcmaB0098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G010220	CmaCh01G010650	Cucurbita maxima (Rimu)	cmacmaB052

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G010220	Cucumber (Chinese Long) v3	cmacucB0054
CmaCh09G010220	Wild cucumber (PI 183967)	cmacpiB046
CmaCh09G010220	Cucumber (Chinese Long) v2	cmacuB044
CmaCh09G010220	Melon (DHL92) v3.5.1	cmameB015
CmaCh09G010220	Cucumber (Gy14) v2	cgybcmaB888
CmaCh09G010220	Melon (DHL92) v3.6.1	cmamedB015