CmaCh09G007310 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G007310
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	TRNA-methyltransferase
Location	Cma_Chr09 : 3488171 .. 3494312 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCATCTCTTTCGTCTATCAAGGTTTGTGCTAGCTTGTATTTGAAGGGGATCCACCATTTGGGAGCCAGTGCGTTTTCTTTGTTGCTTTTGTTCTCTTGTCTGTCTAGTTCAAGCAGGTAAACTGCTTGGATAAAACATGCAACGACGGTTCTTTTGTAATTCCCGTCCTTCCTGCACCGAAATTCCTCAGTGGAATGTCAAAATAAGCCTAACTCAATTGATGTAAATCATATACTATCGACTAAAATGACAGAGGTTCGAATTCTCTACTATCATATTATTGAACTAAGAAAATTAATAAAAAAATGTTTCAATTGAACTGCATGGTTTTCGGCCAGTCTCGGATGGAGATGTTAATGGGTTGGGTTGGATCGAGTTAAGTTGGGACATTTTTTAAACCCAACTCAATTATTCTGGTTACAAACTTTTTAAACTCAAACAACCCTTCCTTATTAAACAATGAACTCAATCCAACTCAACCATAAGATTTTGGAGTTGGGTTGGTTCGGGGATCGTGTCATTTATTCAAATTTTTATTAAATAAAATATAACATATATATAATTGTACCATCTTTTTTTTTAAGATTTAACAATAAATTCGATTTGATTCTGATCCATCTAATCTAATTTTCTCATTTATTTGAATTTAAATCAGTTCAAACAAATTCATAACTCAAACCCTAAGTTTTTTTTTTTTTTTAACACTCAACCTGGTCAAATTCATCCTGCATTAACAAACCAAAATTTTAAAGAAATTGAGATTCGTAATGATCTCGAGAACTCACAAACATCTTGCATAAAAATTCCATTTCTAACAACTGCACTGTCTAGACTTGAAAAATCAAATCAAAATTGTTACTAATTTCGACAAAATTTAGCTTCGAAGGATGAAATCAAGATGATTAAAAGTTTATGAACATCAAAATGTTATTTGATCTTAGATTATAAGCTTGATAGAAGTGAAGAAGAAACCAGAGCCGGAAAAAATGGTGGAAACAGAGGAGAGTGAAGTTACCAACTCGAATTAATGAGATCTCGCCAATTAGGAGAAATAACATTGCGCGGTCCAGATACATGAAAAGCATAGGGATGAGCCTCCTCCTCCGTCGCCGCCGCCGCCGGTGTCGACTCCGCCGTGTCGGGACTTGCCATTAACCCGCCGCCGTGTTTCTCCGAGAGAAAAAGGAAGAAATGTGAGTAAGAGCGTGTGAGAGAGTATTTTTGGGGAAAAAGGCTTCGTTCACTTTGAATCTGATTCGATGTGGACTTCTTAAAATATTTTCCTTTTTCTTTTCAAATGGAATACAATAATGATCCCCAAACGCCTCCAACGGTCATATTTTCAAATCCCTTCCTTTCTTCTCTTTTCTTCAAATTACCAAAATACCCTTCTTCATCTTTAGGATTTAAATGGACATAATTATTAATTTTGAGATTTTAATTAATACAACTTTAAACATCAGATTATAAATAATTTCGTATGAATATTTTAAATTGACAGTTTTTCTTTTGATTTTTAACGCAAATTAATTTTAGAAATATATTTGGAAACGTATATTTGAATTTTTTTCGTGAAAAAATTTAGGATACAATTTAATTATATCTTTAACCCTTTTAGCTATTGGAAGCTGACTCGAAACTTTTCTTTTTTAATAAAAATATAAAAATTTTCAATATCGTATCTTTTCTTCCTAATATGAATGATAGAGATGTTCATTTTATCTATGAGACTCTGCCCCAAACGAAGAGATAATTTCCTATTTAGACAAGAAACGAGGGAAGGAGTGGAGAACATTTTTTCAATTAAATAATCAGCGACAGGAACAAGATTATATTTGTTATATAACCGCGCTTAAAATAAATATATTTTTAATATATATTATAAATACGTTTTTTTAGCTATATTAAATTAATTAATTAATTAATTTTGAGACGGTAATATTTAAAATAAATAAAGACTATGTTGCGGCGAAGCTATTTTCCATTAAATTATGAAAATTGAAGTGCCTATAAATTGCATGATGTAAATTAAAATTTGAAAAGCCAACTGAAAAAATGGAAAAATTGTAGCCGCCAATTCAAGTTCCCCTCCAAGTCCCTGTAATGGAGACCGGAAGCCATAGATTTTTGGCTTGAATACAATAAAATCATGAACTCGAATTTCGTGATTGCGTTCCATGGCTCAAATCCACACTTATCTTCTTCTTCAAATCTTCTGTAGAATAAATGGCCGCTTTTGAAGTTTCATTCTCGTTTTTCATCTTCTTCGAGAAAATTGGCTGTTTCTGAGGGCGCCGAGGGTAGACTCTTCTCATTTCGTCTTCATCCGGTATGCATTGATTCACTGCTTTTGTTTCGTTAATGCATATTTTCTTGCTTTTGCTTGCTGTATACTTGTTTCTTCAAAATTGTGATTCGTTTGATTCTTAGCTCTGTAATCAATCCTGTAGTTTAATTACCTCTACAATGGAAGAATCGTATTCGTAAATCTGAACGATTGAGATTTTAAATTCTTTTGAGAATATATTATTGAGGGAATGGACATTATGAACTCCTTTTTTGATATGGAAGGGGATCCAATTCCAATTCAAATGGCTTATCTATACAAACATAATAAAGTAAAGATTATCTTGTTTTTCCTGGCTAAATACGTTTCTAGTTTCTATGCTTCGACATAGCATGATTCCATTTCCAAATTTAGTTCTAATGCCTTTAGAAATTTCATGAGGAATCTAATTTTAACAATTTCGTAAGGACGAAATATGATAGTTTTAGAAGTAACGGAATCAAATTGAAACTAAGGTTAAAGCATGAGAAATCAAAAGTGTAGTTTAACCTGCTTGTTTTAAAGATTTTACGAAGCAATTAAAGATTATCATTATTTTTCTTTTCAACTGTATAGGATCATCTTCTTCTGCGCACACACAGCTTGATCTCTTGGAGCAACTCTCTTCTGGTAGCCAATTAATTGATGGTAAGTGAGCTGATTCTCTCTTCTAACAAGCAAACAAAATGGGAGTGAAATAGAATGGCATCAGCCTTCTTTCATTGAAAAAGATCATCATCATTTCACTTGAACTTACTGAGATTTTATGTTCTCAGGTTATGAAAGCGATGGCAGTTACCAGAAAATTATGATCCGTGATCAGCTTGCGCAGTTGTTCAGAGACAAAGATGACGATTTTAACATTCCGTTGGGTAAGAACTTGAAGAAGTTTAGTGCCAAGTTTTTGACAAATTCTCAGAAGAGGAAATATCAAAAGACAATCATACTTGAACGAAGTATCTCAAAGGAACGGTCAGTTTTTTTTACTACAGTTGGAGCATTTATAATTTTGCCTTCTATTTTAATATTGGGAATTGCTATAATAATCACTGGCTATAAAAAGTAGGGCTAACTTTTTCCATGATATACAGTTTATACAAACATCATATGCATAGAAGTGATTATCTCATGATCTAGAAGTGATCATGATATTGAAGATTCATTGCCCATTGTTTTCATCTTAATTTTCAACTTCAGTATTTCTGGAAGTAGAATGTTACAGCCTAAGCCCACCATTAGCAGATATTGTTTGTTTTTTGCCCGTTATGTATTGCCATCAGCCTCACAGTTTTAAAACGCATCTTCTATAGAAAGGGTCTAGCCCTACTCCGACCAGTGCCTCGCATCGTCGGTGACTGGCCCTGATACCATTTATAACAACTCAAGCACACTACTAATATATATTGTCTGTTTTAGCCTGTTACGTATCACCGCCAACTTCACGATTATAAAATGCGTATGTTAGGGAGAGATTTCCAGACCCTTATAAGAAATGTTTTGTGCCCCTCTTCAACCAAAAATTATAGGAACCAGATGACAGTATCTTCTTTTTATTCTTCAAAACCTCTGTATTCATTAGGTTCAAATCTGTGATAGAAAACAGAAAAACCACATCAGAAAATAGCTCCTGCAAGCCCAGATTTCATCTCTCGCAAAATACCACACTCTTTCCCTATACAAATCCCAATAAGAGGAGAGATATGAGTAAGAAGAATGACAACAATCTCGTGTTAGTGAAAGCAAGCTTCTGACAAATCTATTTACTCCTTCAGCAAGGATCAGTAGTCAGCTCCTTTTGCTTGTCATTTGGAGAGAGCACTTGATCGGTAGGTGTTATCAAATCATTCCCCAAAATAACTCCTTGCTTTTGTATATACTCCAGTTTGTCTTGGAATAGGTAAAAGAATGAAATCAAAGAAATTTCAACAGTGAAAATTATAGTCCAAATTCGTATACTTCGAGATGTTTTCTCATGGTATGCAAATAATCCTGAATATACATTGAAGACTCCTAGGAGAGATACTGCAGTGCCCAGCATCCAATGTATAAAAAACCATAGGCTTCTTGTGTTAGAGCCCCTGCAAGAGAGATAGAAAAGAGAGAATTCAGCATATAGAAGTCAATGCAAAAGTTGATTTTGGAGTAAGGAAACTTTGTTTGTTTTTTCTAATCGTTTCTTTTAACAAAAGATCAGTAGAAACATGGTTGTTGAATAACTGTTACAAAAATTGTTTTTGTGAGTCTGTTCTTGGATGGCCTATTCTTACAACAACCAGTACTCTTCATCCTTCAAAAATTGTTGGCTCGCATGTATAATAACACAAACATTTATAAGCTGCCCAATCATATTCTTAGAAATGTTTCGAATATAGAACAGGAGATATTGCCTTATATCTGATGAAGTATGAAATTTTACCTCTTTGGCCTTACAATTCCAATCAACGCCTGTAACCAGATCATCCCATATAGGCCAATCCCTATCCTTTGATGACTATTATTGAAAGCATTGTTGAATTTCTTGATAGACATGACTGCTCCTGCTGTGACTAGTAATACAGAGAGTATCTGTTGAACAGAATCAAGTGAAGATCATATAATGACTGTATTAACTTATTTTAGAATGGAAAATACTAGCATTGTGATCACAAATCACAGTTCTTTATTGGAATGAGATCCATCAAAGTGGACCCCATCTATGTGGTTGAAGGATGATCAAAATCCTTCAACTTCATATTTTTATATCCTTTTTGACTTTTTAGAGCTAAATCTCACCTAACTCCTATATTATAATCCATAAACCTGCTAGATTTCAACAATATGGATATTTGGCTATGAGGTTCTAATTAGTTAGAATATGATGATGTGTATTTTTTCTTTCGACACAAGTATTCATAATTATCTGCTTGATCAACTTTTGTGTTAACAAACTTGGGGGCTGTATAAGATATTCAGAATCAGGACCCTTGTGGTTTCCCTTGAACCATCATTAAGCTCATAAAGTAAAGAAAAAAAAATGGATTGTTTGCTTGTTTAATGAAAAGATAAAGTTAATTGCGTTAATGATGCTTTCCTACAACTCTCTACATTTATTGTCTGTTTAGTTAAAAAAAACATTCTTCTTTATGAAAACAATAACAAAAAAAAGTACTTATTTTAGTATTTGAGAGTATTGCTGGACAAGATTGTGATGAACAAAGAGCGCAGAGATGAACTTGCCTGTAGAATTGTATGAATGTAGAAATAAAATTTCAGCCTTCTTCCACATTGCTCCCTGCTAGACATTCTGATAACAAGTATCCCAACAGGCATAAGGAACCCCATAGAAGCCCATAGGAGAAATCCATGGAGTGTGATATCAAACAGTAGGCTGGAACTCATCTGTTACCATTATAACCAATAATCAATTACAGCTATACATTTTTTTTTTTTTTCTGCATTGATATTTCTTTTCAAATATCAAGACATGTAAAATATAAAATGAAAGAAGAGGAAACCTTCTGGCTGTGGTCTTTCTTGCTTGTATTGAAGTTTTCGTTTTTGTAGGGCTGTTGGGATGAGCTGACTGGTTGAAATGTGAGAAGGAGGAGGAGAAAAAGTATTGAACTTGCAGGGATGGAGAAAGGAAACATTCTCTTCTGTAAAAAGAGCATTGTTTATTTTCTCCTGATGAAACAAGCTCCAAGCACAATGCAGAAGCCACCCGCGTTGGCTGCTTACTTGTTTGCTATGGATTTCACAAGCCATCTTGAAAGCTTTTGTAGCAATGAGGAAAAAGGAATAAGCAGAACAATGTCAGAGGAGGACCACTAA

mRNA sequence

ATGGAACCATCTCTTTCGTCTATCAAGGTTTGTGCTAGCTTGTATTTGAAGGGGATCCACCATTTGGGAGCCAGTGCGTTTTCTTTGTTGCTTTTGTTCTCTTGTCTGTCTAGTTCAAGCAGGGATGAGCCTCCTCCTCCGTCGCCGCCGCCGCCGGTGTCGACTCCGCCGTGTCGGGACTTGCCATTAACCCGCCGCCGTGTTTCTCCGAGAGAAAAAGGAAGAAATAATAAATGGCCGCTTTTGAAGTTTCATTCTCGTTTTTCATCTTCTTCGAGAAAATTGGCTGTTTCTGAGGGCGCCGAGGGTAGACTCTTCTCATTTCGTCTTCATCCGCTTGATCTCTTGGAGCAACTCTCTTCTGGTAGCCAATTAATTGATGGTTATGAAAGCGATGGCAGTTACCAGAAAATTATGATCCGTGATCAGCTTGCGCAGTTGTTCAGAGACAAAGATGACGATTTTAACATTCCGTTGGGTAAGAACTTGAAGAAGTTTAGTGCCAAGTTTTTGACAAATTCTCAGAAGAGGAAATATCAAAAGACAATCATACTTGAACGAAGTATCTCAAAGGAACGGAGGAGGAGAAAAAGTATTGAACTTGCAGGGATGGAGAAAGGAAACATTCTCTTCTGTAAAAAGAGCATTGTTTATTTTCTCCTGATGAAACAAGCTCCAAGCACAATGCAGAAGCCACCCGCGTTGGCTGCTTACTTGTTTGCTATGGATTTCACAAGCCATCTTGAAAGCTTTTGTAGCAATGAGGAAAAAGGAATAAGCAGAACAATGTCAGAGGAGGACCACTAA

Coding sequence (CDS)

ATGGAACCATCTCTTTCGTCTATCAAGGTTTGTGCTAGCTTGTATTTGAAGGGGATCCACCATTTGGGAGCCAGTGCGTTTTCTTTGTTGCTTTTGTTCTCTTGTCTGTCTAGTTCAAGCAGGGATGAGCCTCCTCCTCCGTCGCCGCCGCCGCCGGTGTCGACTCCGCCGTGTCGGGACTTGCCATTAACCCGCCGCCGTGTTTCTCCGAGAGAAAAAGGAAGAAATAATAAATGGCCGCTTTTGAAGTTTCATTCTCGTTTTTCATCTTCTTCGAGAAAATTGGCTGTTTCTGAGGGCGCCGAGGGTAGACTCTTCTCATTTCGTCTTCATCCGCTTGATCTCTTGGAGCAACTCTCTTCTGGTAGCCAATTAATTGATGGTTATGAAAGCGATGGCAGTTACCAGAAAATTATGATCCGTGATCAGCTTGCGCAGTTGTTCAGAGACAAAGATGACGATTTTAACATTCCGTTGGGTAAGAACTTGAAGAAGTTTAGTGCCAAGTTTTTGACAAATTCTCAGAAGAGGAAATATCAAAAGACAATCATACTTGAACGAAGTATCTCAAAGGAACGGAGGAGGAGAAAAAGTATTGAACTTGCAGGGATGGAGAAAGGAAACATTCTCTTCTGTAAAAAGAGCATTGTTTATTTTCTCCTGATGAAACAAGCTCCAAGCACAATGCAGAAGCCACCCGCGTTGGCTGCTTACTTGTTTGCTATGGATTTCACAAGCCATCTTGAAAGCTTTTGTAGCAATGAGGAAAAAGGAATAAGCAGAACAATGTCAGAGGAGGACCACTAA

Protein sequence

MEPSLSSIKVCASLYLKGIHHLGASAFSLLLLFSCLSSSSRDEPPPPSPPPPVSTPPCRDLPLTRRRVSPREKGRNNKWPLLKFHSRFSSSSRKLAVSEGAEGRLFSFRLHPLDLLEQLSSGSQLIDGYESDGSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIILERSISKERRRRKSIELAGMEKGNILFCKKSIVYFLLMKQAPSTMQKPPALAAYLFAMDFTSHLESFCSNEEKGISRTMSEEDH

Homology

[Close]

BLAST of CmaCh09G007310 vs. TrEMBL
Match: A0A0A0L2V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608080 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.3e-29
Identity = 79/123 (64.23%), Postives = 86/123 (69.92%), Query Frame = 1


Query: 76  NNKWPLLKFHSRFSSSSRKLAVSEGAEGRL-------------FSFRLHPLDLLEQLSSG 135
           +NK    KFHSR SSSSRK AVSE AEGR+              S     LDLLEQLSSG
Sbjct: 28  HNKSLPFKFHSRCSSSSRKFAVSESAEGRVNEEEFLISSSSGSSSSARTQLDLLEQLSSG 87

Query: 136 SQLIDGYESDGSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKT 186
           SQL+DGYESDGSY K  IRDQLAQLFRD+DDDF +PLGKNLKK SAKFLT SQKR  ++ 
Sbjct: 88  SQLVDGYESDGSYGKTTIRDQLAQLFRDRDDDFTVPLGKNLKKVSAKFLTISQKRNIKRQ 147

[Close]

BLAST of CmaCh09G007310 vs. TrEMBL
Match: M1BGE7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017304 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17
Identity = 58/113 (51.33%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 85  HSRFSSSSRKLAVSEGAEGRL------------FSFRLHPLDLLEQLSSGSQLIDGYESD 144
           H  + SS R+ A+SE  +GR+             S     LDLLEQL+S S  ++GYESD
Sbjct: 20  HKLYYSSIRRAALSEQGDGRVTKEEDLPTYSGSLSSARTQLDLLEQLTSSSSAVNGYESD 79

Query: 145 GSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
            S  K  IRDQLA L   +DDDF+IPLGKNLKKFSAKFLT SQKR  ++   L
Sbjct: 80  SSSGKPTIRDQLANLVGSRDDDFSIPLGKNLKKFSAKFLTTSQKRNIKRQAYL 132

[Close]

BLAST of CmaCh09G007310 vs. TrEMBL
Match: A0A0V0GQ07_SOLCH (Putative vitellogenin-1-like (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17
Identity = 58/113 (51.33%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 85  HSRFSSSSRKLAVSEGAEGRL------------FSFRLHPLDLLEQLSSGSQLIDGYESD 144
           H  + SS R+ A+SE  +GR+             S     LDLLEQL+S S  ++GYESD
Sbjct: 18  HKLYYSSIRRAALSEQGDGRVTKEEDLPTYSGSLSSARTQLDLLEQLTSSSSAVNGYESD 77

Query: 145 GSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
            S  K  IRDQLA L   +DDDF+IPLGKNLKKFSAKFLT SQKR  ++   L
Sbjct: 78  SSSGKPTIRDQLANLVGSRDDDFSIPLGKNLKKFSAKFLTTSQKRNIKRQAYL 130

[Close]

BLAST of CmaCh09G007310 vs. TrEMBL
Match: K4CGF7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.1e-17
Identity = 57/113 (50.44%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 85  HSRFSSSSRKLAVSEGAEGRLFSFRLHP------------LDLLEQLSSGSQLIDGYESD 144
           H  + SS R+ A+SE  +GR+      P            LDLLEQL+S S  ++GYESD
Sbjct: 21  HKLYYSSLRRAALSEQGDGRVTKEEELPTYSGSLSSARTQLDLLEQLTSSSSEVNGYESD 80

Query: 145 GSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
            +  K  IRDQLA L   +DDDF+IPLGKNLKKFSAKFLT SQKR  ++   L
Sbjct: 81  STSGKPTIRDQLANLVGSRDDDFSIPLGKNLKKFSAKFLTTSQKRNIKRQAYL 133

[Close]

BLAST of CmaCh09G007310 vs. TrEMBL
Match: I1JJ29_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G285100 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 60/116 (51.72%), Postives = 72/116 (62.07%), Query Frame = 1


Query: 81  LLKFHSRFSSSSRKLAVSEGAE-----------GRLFSFRLHPLDLLEQLSSGSQLIDGY 140
           L+KF+  FSS     A + G +           G L S R   LDLLEQL+S S    GY
Sbjct: 37  LIKFYHPFSSLLTTCAQTHGTDTGVTQKDDASAGSLSSSRAQ-LDLLEQLTSTSSPNSGY 96

Query: 141 ESDGSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
           ESDGS +K+ IR+QL QLF ++DDDF IPLGKNLKK SAKFLT SQKR  ++   L
Sbjct: 97  ESDGSSRKLTIREQLVQLFGERDDDFTIPLGKNLKKVSAKFLTISQKRNIRRQTYL 151

[Close]

BLAST of CmaCh09G007310 vs. TAIR10
Match: AT2G42975.1 (AT2G42975.1 unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 9.6e-14
Identity = 57/130 (43.85%), Postives = 70/130 (53.85%), Query Frame = 1


Query: 53  VSTPPCRDLPLTRRRVSPREKGRNNKWPLLKFHSRFSSSSRKLAVSEGAEGRLFSFRLHP 112
           +S+PP   +   R  +   +   NN        S FS SS   +V               
Sbjct: 32  LSSPPATRVRSERSEIGVTDDNNNNNDTS---SSSFSGSSSSSSVRT------------Q 91

Query: 113 LDLLEQLSSGSQLIDGYESDGSYQK-IMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFL 172
           LDLLEQL+S S   DGY SDG   + + IRDQLA L  D+DDDF+IPLGKNLKK S KFL
Sbjct: 92  LDLLEQLTSTS---DGYLSDGGGSRGLTIRDQLAGLVGDRDDDFSIPLGKNLKKVSPKFL 143

Query: 173 TNSQKRKYQK 182
           T SQKR  ++
Sbjct: 152 TISQKRNIKR 143

[Close]

BLAST of CmaCh09G007310 vs. NCBI nr
Match: gi|659130963|ref|XP_008465443.1| (PREDICTED: vitellogenin-1 [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 4.5e-29
Identity = 78/117 (66.67%), Postives = 85/117 (72.65%), Query Frame = 1


Query: 82  LKFHSRFSSSSRKLAVSEGAEGRL-------------FSFRLHPLDLLEQLSSGSQLIDG 141
           LKFHSR SSSSRK AVSE AEGR+              S     LDLLEQLSSGSQL+DG
Sbjct: 34  LKFHSRCSSSSRKFAVSESAEGRVNEEEFLISSSSGSSSSARTQLDLLEQLSSGSQLVDG 93

Query: 142 YESDGSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
           YESDGSY K  IRDQLAQLFRD+DDDF++PLGKNLKK SAKFLT SQKR  ++   L
Sbjct: 94  YESDGSYGKTTIRDQLAQLFRDRDDDFSVPLGKNLKKVSAKFLTISQKRNIKRQAYL 150

[Close]

BLAST of CmaCh09G007310 vs. NCBI nr
Match: gi|778695333|ref|XP_004144634.2| (PREDICTED: uncharacterized protein LOC101216249 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 7.6e-29
Identity = 79/123 (64.23%), Postives = 86/123 (69.92%), Query Frame = 1


Query: 76  NNKWPLLKFHSRFSSSSRKLAVSEGAEGRL-------------FSFRLHPLDLLEQLSSG 135
           +NK    KFHSR SSSSRK AVSE AEGR+              S     LDLLEQLSSG
Sbjct: 28  HNKSLPFKFHSRCSSSSRKFAVSESAEGRVNEEEFLISSSSGSSSSARTQLDLLEQLSSG 87

Query: 136 SQLIDGYESDGSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKT 186
           SQL+DGYESDGSY K  IRDQLAQLFRD+DDDF +PLGKNLKK SAKFLT SQKR  ++ 
Sbjct: 88  SQLVDGYESDGSYGKTTIRDQLAQLFRDRDDDFTVPLGKNLKKVSAKFLTISQKRNIKRQ 147

[Close]

BLAST of CmaCh09G007310 vs. NCBI nr
Match: gi|565364498|ref|XP_006348961.1| (PREDICTED: uncharacterized protein LOC102603394 [Solanum tuberosum])

HSP 1 Score: 98.2 bits (243), Expect = 2.3e-17
Identity = 58/113 (51.33%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 85  HSRFSSSSRKLAVSEGAEGRL------------FSFRLHPLDLLEQLSSGSQLIDGYESD 144
           H  + SS R+ A+SE  +GR+             S     LDLLEQL+S S  ++GYESD
Sbjct: 20  HKLYYSSIRRAALSEQGDGRVTKEEDLPTYSGSLSSARTQLDLLEQLTSSSSAVNGYESD 79

Query: 145 GSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
            S  K  IRDQLA L   +DDDF+IPLGKNLKKFSAKFLT SQKR  ++   L
Sbjct: 80  SSSGKPTIRDQLANLVGSRDDDFSIPLGKNLKKFSAKFLTTSQKRNIKRQAYL 132

[Close]

BLAST of CmaCh09G007310 vs. NCBI nr
Match: gi|970037953|ref|XP_015080312.1| (PREDICTED: uncharacterized protein LOC107023969 [Solanum pennellii])

HSP 1 Score: 97.8 bits (242), Expect = 3.0e-17
Identity = 58/113 (51.33%), Postives = 70/113 (61.95%), Query Frame = 1


Query: 85  HSRFSSSSRKLAVSEGAEGRL------------FSFRLHPLDLLEQLSSGSQLIDGYESD 144
           H  + SS R+ A+SE  +GR+             S     LDLLEQL+S S  ++GYESD
Sbjct: 21  HKFYYSSLRRAALSEQGDGRVTKEEELSTYSGSLSSARTQLDLLEQLTSSSSAVNGYESD 80

Query: 145 GSYQKIMIRDQLAQLFRDKDDDFNIPLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
            S  K  IRDQLA L   +DDDF+IPLGKNLKKFSAKFLT SQKR  ++   L
Sbjct: 81  SSSGKPTIRDQLANLVGSRDDDFSIPLGKNLKKFSAKFLTTSQKRNIKRQAYL 133

[Close]

BLAST of CmaCh09G007310 vs. NCBI nr
Match: gi|1009126286|ref|XP_015880069.1| (PREDICTED: uncharacterized protein LOC107416123 [Ziziphus jujuba])

HSP 1 Score: 96.7 bits (239), Expect = 6.7e-17
Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 1


Query: 98  SEGAEGRLFSFRLHPLDLLEQLSSGSQLIDGYESDGSYQKIMIRDQLAQLFRDKDDDFNI 157
           S  +EG L S R   LDLLEQL+S S  +DGYESDGS  +  IR+QLAQLF D+DD+F+I
Sbjct: 60  SSFSEGSLSSARTQ-LDLLEQLTSTSSSVDGYESDGSSWRPTIREQLAQLFGDRDDEFSI 119

Query: 158 PLGKNLKKFSAKFLTNSQKRKYQKTIIL 186
           PLGKNLKK SAKFLT SQKR  ++   L
Sbjct: 120 PLGKNLKKVSAKFLTISQKRNIRRQAYL 146

The following BLAST results are available for this feature:

BLAST of CmaCh09G007310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G007310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2V6_CUCSA	5.3e-29	64.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608080 PE=4 SV=1	[more]
M1BGE7_SOLTU	1.6e-17	51.33	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017304 PE=4 SV=1	[more]
A0A0V0GQ07_SOLCH	1.6e-17	51.33	Putative vitellogenin-1-like (Fragment) OS=Solanum chacoense PE=4 SV=1	[more]
K4CGF7_SOLLC	6.1e-17	50.44	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
I1JJ29_SOYBN	1.0e-16	51.72	Uncharacterized protein OS=Glycine max GN=GLYMA_02G285100 PE=4 SV=1	[more]

BLAST of CmaCh09G007310 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42975.1	9.6e-14	43.85	unknown protein	[more]

BLAST of CmaCh09G007310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130963\|ref\|XP_008465443.1\|	4.5e-29	66.67	PREDICTED: vitellogenin-1 [Cucumis melo]	[more]
gi\|778695333\|ref\|XP_004144634.2\|	7.6e-29	64.23	PREDICTED: uncharacterized protein LOC101216249 [Cucumis sativus]	[more]
gi\|565364498\|ref\|XP_006348961.1\|	2.3e-17	51.33	PREDICTED: uncharacterized protein LOC102603394 [Solanum tuberosum]	[more]
gi\|970037953\|ref\|XP_015080312.1\|	3.0e-17	51.33	PREDICTED: uncharacterized protein LOC107023969 [Solanum pennellii]	[more]
gi\|1009126286\|ref\|XP_015880069.1\|	6.7e-17	62.50	PREDICTED: uncharacterized protein LOC107416123 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G007310.1	CmaCh09G007310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36742	FAMILY NOT NAMED	coord: 113..177 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G007310	Cla023232	Watermelon (97103) v1	cmawmB038
CmaCh09G007310	MELO3C026968	Melon (DHL92) v3.5.1	cmameB036
CmaCh09G007310	CmoCh09G007240	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G007310	Lsi04G018820	Bottle gourd (USVL1VR-Ls)	cmalsiB025
CmaCh09G007310	Cp4.1LG06g05850	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G007310	Cp4.1LG02g02480	Cucurbita pepo (Zucchini)	cmacpeB055
CmaCh09G007310	MELO3C026968.2	Melon (DHL92) v3.6.1	cmamedB035
CmaCh09G007310	Carg14783	Silver-seed gourd	carcmaB0432

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G007310	Cucumber (Chinese Long) v3	cmacucB0032
CmaCh09G007310	Watermelon (97103) v2	cmawmbB021
CmaCh09G007310	Wax gourd	cmawgoB0028
CmaCh09G007310	Cucurbita maxima (Rimu)	cmacmaB054
CmaCh09G007310	Cucurbita maxima (Rimu)	cmacmaB045
CmaCh09G007310	Cucumber (Gy14) v1	cgycmaB0076
CmaCh09G007310	Cucurbita moschata (Rifu)	cmacmoB051
CmaCh09G007310	Cucurbita moschata (Rifu)	cmacmoB041
CmaCh09G007310	Wild cucumber (PI 183967)	cmacpiB024
CmaCh09G007310	Cucumber (Chinese Long) v2	cmacuB025
CmaCh09G007310	Watermelon (Charleston Gray)	cmawcgB016
CmaCh09G007310	Cucurbita pepo (Zucchini)	cmacpeB048
CmaCh09G007310	Cucumber (Gy14) v2	cgybcmaB470
CmaCh09G007310	Silver-seed gourd	carcmaB0435
CmaCh09G007310	Silver-seed gourd	carcmaB1445