CmaCh09G006800 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACGCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGTCGCCGTCCTAGGGTTTTGCGCGGCGACGTGGGCGAAACAGAGGAAGTGCGAGAAGACAGAGCGCCGACAGACGAAGGCGACGGAGAGGTGGTGGTGGAAGGGGGCAGCGGATAGGCGGAAGGTGAGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCGGCGAAGGGGAAGATTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATTTTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGAAGATTGCTGCAGGATCAAATTGCCGCCATGGAAAACGGTTACAAGGTGCTGCTTCGTAAGTTCTTTCGTAGTTTTTCTTAA ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACGCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGTCGCCGTCCTAGGGTTTTGCGCGGCGACGTGGGCGAAACAGAGGAAGTGCGAGAAGACAGAGCGCCGACAGACGAAGGCGACGGAGAGGTGGTGGTGGAAGGGGGCAGCGGATAGGCGGAAGGTGAGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCGGCGAAGGGGAAGATTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATTTTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGAAGATTGCTGCAGGATCAAATTGCCGCCATGGAAAACGGTTACAAGGTGCTGCTTCGTAAGTTCTTTCGTAGTTTTTCTTAA ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACGCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGTCGCCGTCCTAGGGTTTTGCGCGGCGACGTGGGCGAAACAGAGGAAGTGCGAGAAGACAGAGCGCCGACAGACGAAGGCGACGGAGAGGTGGTGGTGGAAGGGGGCAGCGGATAGGCGGAAGGTGAGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCGGCGAAGGGGAAGATTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATTTTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGAAGATTGCTGCAGGATCAAATTGCCGCCATGGAAAACGGTTACAAGGTGCTGCTTCGTAAGTTCTTTCGTAGTTTTTCTTAA MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAATWAKQRKCEKTERRQTKATERWWWKGAADRRKVSGGGETPVRLLGGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGYKVLLRKFFRSFS
BLAST of CmaCh09G006800 vs. TrEMBL
Match: A0A0A0L376_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G622860 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 8.4e-53 Identity = 108/139 (77.70%), Postives = 116/139 (83.45%), Query Frame = 1
BLAST of CmaCh09G006800 vs. TrEMBL
Match: A0A068UBX3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021414001 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22 Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 1
BLAST of CmaCh09G006800 vs. TrEMBL
Match: A0A061FGE7_THECC (Ribosomal RNA small subunit methyltransferase G, putative OS=Theobroma cacao GN=TCM_032143 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21 Identity = 72/156 (46.15%), Postives = 92/156 (58.97%), Query Frame = 1
BLAST of CmaCh09G006800 vs. TrEMBL
Match: B9N7S2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s10460g PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.2e-21 Identity = 71/166 (42.77%), Postives = 93/166 (56.02%), Query Frame = 1
BLAST of CmaCh09G006800 vs. TrEMBL
Match: B9SZ20_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0494070 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.5e-21 Identity = 69/169 (40.83%), Postives = 89/169 (52.66%), Query Frame = 1
BLAST of CmaCh09G006800 vs. TAIR10
Match: AT3G14760.1 (AT3G14760.1 unknown protein) HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14 Identity = 53/148 (35.81%), Postives = 76/148 (51.35%), Query Frame = 1
BLAST of CmaCh09G006800 vs. TAIR10
Match: AT1G49000.1 (AT1G49000.1 unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 5.3e-06 Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = 1
BLAST of CmaCh09G006800 vs. NCBI nr
Match: gi|778695623|ref|XP_011654026.1| (PREDICTED: uncharacterized protein LOC105435286 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 4.0e-56 Identity = 115/149 (77.18%), Postives = 123/149 (82.55%), Query Frame = 1
BLAST of CmaCh09G006800 vs. NCBI nr
Match: gi|700199869|gb|KGN55027.1| (hypothetical protein Csa_4G622860 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52 Identity = 108/139 (77.70%), Postives = 116/139 (83.45%), Query Frame = 1
BLAST of CmaCh09G006800 vs. NCBI nr
Match: gi|659131296|ref|XP_008465611.1| (PREDICTED: uncharacterized protein LOC103503252 [Cucumis melo]) HSP 1 Score: 207.2 bits (526), Expect = 1.9e-50 Identity = 107/140 (76.43%), Postives = 116/140 (82.86%), Query Frame = 1
BLAST of CmaCh09G006800 vs. NCBI nr
Match: gi|661890563|emb|CDP06060.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22 Identity = 73/160 (45.62%), Postives = 92/160 (57.50%), Query Frame = 1
BLAST of CmaCh09G006800 vs. NCBI nr
Match: gi|590611129|ref|XP_007022014.1| (Ribosomal RNA small subunit methyltransferase G, putative [Theobroma cacao]) HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21 Identity = 72/156 (46.15%), Postives = 92/156 (58.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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