CmaCh08G006200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G006200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Usher syndrome type-1C-binding protein 1
Location	Cma_Chr08 : 3481646 .. 3484377 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCATAGTCGACTTTTCTCTCCTCACAATGGCATCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACTGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCGTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGTCGTTCATCTCTCTTGCTCTCTTTTAATCCCTGTGCTAAATCCGCCGTTTGTACTGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTAATATTCTTTGCTGGTGCTTCTCGTGCTTAATTCATTTATTGGACTGAACTGCTCGTGTTAAGGCTTAGAAATTTTAGTGCATAGAGCTTGGTTATGTGTTTACTTATTTCTATTTCGTTTTTCCATGAACGGTTGAGGAGTTCGCTTTATCCTTATCCCTATAGCATGCCTTCATGACTGAAAATAAAAATTATTAGCTCCTGAATTTTGCTCGGATTGTGCTAGACTGCTAGTGGTCCTTATTTCTCGACTGCTACAACTAATAACAGTGTTATTTATCCATTTGAGTTCTGGTTGTTTAGAAGCTAATCATCCATAAATATTTTTCGTTTTTTTAGTCATCTGGAAATTTGTTCCGCTAGGTCTGCGGATACATATGTGCTTAGCAATTATATCTAATTTTCTCGTGATTTATTTTGAAAGTTTGTTAGATAGAAAGTTCTGCTCAATACGTCATAGATATGTTGAAATCTCAACGGAAAAGAAATAATGGTATTTGGAGTGTGCGATTCATTAGGTTCAACTACTCCGTAATCATTTTTCATTAACCGCGTCAGCAAAGTTCAATTGTCAATTTTAATGAGCAATTCGTAAACATATCCGAGTATAGATGTTTAGCTGCAAATATAAAGCCATTTCCCCCTCCATAACAACAGTTATATATATTTGCTTTCGTGCAAGAATCATAGCGATTTCTTAGGATTCAACTTTCCGATTGTAAGATGAAGTGTCTTCTTCTTTTCTAGCCCCTTATCGTATAGCTGCTGGAGACTTTTGGTCTTTGATGATGATTCCCCGCTGAAGTTGAAGTTGTTTGGCTTGGATAACTTAGGCCTTTGATAATCATTTGGCTTCCGGAAATTGTGTTTGATTTCTTATTAATTCTCTACCATGAGTTTCATCTTTCTTAACCAAACATTTAAAGTTTTAGCCAAATTCCAAAAACAGTAACATGTTTAAATTTTTTTTTTTTTTCTAGTTTTCAAAACTTGACTGGTTTTTTAAAACATAGATAACAAAATAAAGAAATTCATAGGCCAAAGTAATATTTATTGACTTAAATTTCAATAATCAAACAGTTATCAAACAAGATTTTAATTTTTCTTTCAATTCATTTTTTGACACTCCCTTGGCCAAATATTAATTTTGGTTCACGATGCCTAACATGTGATCATTTAGTATGAAATGGGATGAAATTGGAAAGGATATTCCGGTGATTTGAGACGTATCTAGGTTTTCTACCTTAAATTAGTGTACTCTATCCAAACTTCTTTTTTGTAACTATAGCTTCTTGATTATAGCCAATTGGAGTGCTTTTCTGCAGTTTTCTTGCATTCTGGGAGATTGTTAAGCTTCATCGTCTGTATTAGATTAAAACTGTTGGTGTTGGTAATACTCTGAAATTCTACCGAGTCATTATATATTTTTGATGTTAGAACTTGGTACTAATTTTCTTGCATGTAATTCATATTGTAACTTGTTTGGTCTATTTTGAATTGCTTTGGTCATGCTGAGGTTCTTTGATGTGGATGAAATATGTTTCCTTATTTCTCTTCGTATTATAATTTAAGCAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAAAGCATTCTTTTGTAAAGGATTGCAGGTTAATATAAATAGTGTTAAGCTGCTTGATTTTAGCTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTCAATTAGATGTTGATACCAAAGGTAAACTGTCATGGAAAGCCCTGTTCTGTATCATATTCTTATCAAGTGTCTTAAAACTTTCCTGAATCCTACTCTAATTATTAACTTTTTTTCTTTTTTGAACCTTGATTTGTGCACATCATCCTTGCGTAGGGCTATGCAAGTGCACATCATCCTCGTATTGCGTCATGTCAATTTTCTTTGTATTGTTTCAACTTCTCTGATGCCTCTAGAGTGACAACGACCAATCTTTTTCACTACTAAGTTACAATTCTGTATAGATTGTTCTGGTAGGTGTTTTCTTTGACAGGGATTTGGTTGATGGATGTACAAGATTGTCTACGAGGGTTGCAGTTGAAACATTTGGAATCATTGTGTTGCTTGCAGCATCAGAATGATGGGAGATATGTTTGGTTCTTGAGATAATTAGAAGTCTTTGCCACAACCTGGTTGACACATTGCCCATAGTTATACGTATGGCTACAATTTATTTTTGCATTAAATAAATTTTAAAAGTAGTGGTCAAATTGTATTTTGCTAGGTTTATGAGAAGCCGAAAGTACTTGAGCTTTTAGTAGATGACATAGCTTTAAAAAAATTAAAA

mRNA sequence

ATGGAATCATAGTCGACTTTTCTCTCCTCACAATGGCATCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACTGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCGTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGTCGTTCATCTCTCTTGCTCTCTTTTAATCCCTGTGCTAAATCCGCCGTTTGTACTGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAAAGCATTCTTTTGTAAAGGATTGCAGGTTAATATAAATAGTGTTAAGCTGCTTGATTTTAGCTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTCAATTAGATGTTGATACCAAAGGTAAACTGTCATGGAAAGCCCTGTTCTGTATCATATTCTTATCAAGTGTCTTAAAACTTTCCTGAATCCTACTCTAATTATTAACTTTTTTTCTTTTTTGAACCTTGATTTGTGCACATCATCCTTGCGTAGGGCTATGCAAGTGCACATCATCCTCGTATTGCGTCATGTCAATTTTCTTTGTATTGTTTCAACTTCTCTGATGCCTCTAGAGTGACAACGACCAATCTTTTTCACTACTAAGTTACAATTCTGTATAGATTGTTCTGGTAGGTGTTTTCTTTGACAGGGATTTGGTTGATGGATGTACAAGATTGTCTACGAGGGTTGCAGTTGAAACATTTGGAATCATTGTGTTGCTTGCAGCATCAGAATGATGGGAGATATGTTTGGTTCTTGAGATAATTAGAAGTCTTTGCCACAACCTGGTTGACACATTGCCCATAGTTATACGTATGGCTACAATTTATTTTTGCATTAAATAAATTTTAAAAGTAGTGGTCAAATTGTATTTTGCTAGGTTTATGAGAAGCCGAAAGTACTTGAGCTTTTAGTAGATGACATAGCTTTAAAAAAATTAAAA

Coding sequence (CDS)

ATGGCATCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACTGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCGTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGTCGTTCATCTCTCTTGCTCTCTTTTAATCCCTGTGCTAAATCCGCCGTTTGTACTGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAG

Protein sequence

MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

Homology

[Close]

BLAST of CmaCh08G006200 vs. TrEMBL
Match: A0A0A0K8T0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432560 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.3e-40
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 1


Query: 9   SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRR-SSLLLSFNPCAKSAVCTAAV 68
           S +L+  S++V A +IA+PL S+FH R EI FS LH RR S L  S N  A+S VC+AAV
Sbjct: 5   STSLHRSSQSVAASSIALPLCSTFHLRSEICFS-LHRRRLSPLFFSSNSYAESVVCSAAV 64

Query: 69  RPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGS 128
           RPPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFWMSLFFWTSALDG+NRPNKGS
Sbjct: 65  RPPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGRNRPNKGS 124

Query: 129 RFRR 132
           RFRR
Sbjct: 125 RFRR 127

[Close]

BLAST of CmaCh08G006200 vs. TrEMBL
Match: A0A067KLQ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06143 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.1e-19
Identity = 62/134 (46.27%), Postives = 77/134 (57.46%), Query Frame = 1


Query: 18  AVTAPAIAIPLFSSFHARPEI--SFSPLH-HRRSSLLLSFNPCA-------------KSA 77
           A+ +P  A    S+ +ARP+    F+PL+     SLL   NP               +S 
Sbjct: 2   AILSPPPATTTTSTTYARPQSFPKFNPLNLQSHPSLLFPINPSRPFLPPRPNPNARLRSL 61

Query: 78  VCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKN 132
               + +PP   DPPP++DP+R KG  A FS+F DRVQIF AVLFWMSLFFW SA  G+N
Sbjct: 62  YSALSPQPPTQPDPPPEKDPVRPKGIAATFSRFQDRVQIFLAVLFWMSLFFWASASGGRN 121

[Close]

BLAST of CmaCh08G006200 vs. TrEMBL
Match: D7U123_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06800 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.6e-18
Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 1


Query: 38  ISFSPLHHRRSSLLLSFNPCA--------KSAVCTAAVRPPPDSDPPPDEDPIRLKGFPA 97
           +SF    HR S   + F+P +        +    T +  PPP+SDPPP  DP+ L G  A
Sbjct: 34  LSFPISCHRSSPSPIRFHPPSLPPRTASLRRRASTPSPPPPPESDPPPQNDPVPLTGLVA 93

Query: 98  IFSKFGDRVQIFFAVLFWMSLFFWTSALDGKN--RPNKGSRFRR 132
            FS+F D +QIFFAVLFW+SLFFW SA DG+N  RPNKGSR RR
Sbjct: 94  TFSRFQDSIQIFFAVLFWLSLFFWASAWDGRNGGRPNKGSRLRR 137

[Close]

BLAST of CmaCh08G006200 vs. TrEMBL
Match: G7JGZ0_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_4g010270 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.7e-17
Identity = 60/117 (51.28%), Postives = 70/117 (59.83%), Query Frame = 1


Query: 28  LFSSFHA-RPEISFSPLHHRRSSLLLS------FNPCAKSAV------CTAAVRPPPDSD 87
           LF+SF    P  S SP     SSL LS      F P + S+       C AA   PP   
Sbjct: 10  LFTSFTTLSPSPSPSPSPSPSSSLSLSTSSNRSFQPLSSSSTSLRRLRCRAASPNPPP-- 69

Query: 88  PPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 132
           PPP+ +   L+G  A  SKF DRVQIFFAVLFWM+LFFW SA DG+NRPNKGS+FR+
Sbjct: 70  PPPENESTELQGVVASLSKFQDRVQIFFAVLFWMTLFFWASAWDGRNRPNKGSKFRK 124

[Close]

BLAST of CmaCh08G006200 vs. TrEMBL
Match: M5XBA0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013224mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.3e-16
Identity = 51/90 (56.67%), Postives = 58/90 (64.44%), Query Frame = 1


Query: 42  PLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIF 101
           PLH RR  + L  +P      C AA   PP   PPP+ D   L G  A FSKF D+VQIF
Sbjct: 51  PLHPRRPYVALPSSP----GRCFAANSGPPL--PPPESDSTSLTGLVASFSKFQDKVQIF 110

Query: 102 FAVLFWMSLFFWTSALDGKNRPNKGSRFRR 132
           FAVLFWMSLFFW S  D ++RPNKGSRFR+
Sbjct: 111 FAVLFWMSLFFWASVWDERSRPNKGSRFRK 134

[Close]

BLAST of CmaCh08G006200 vs. TAIR10
Match: AT3G15780.1 (AT3G15780.1 unknown protein)

HSP 1 Score: 72.4 bits (176), Expect = 2.3e-13
Identity = 48/132 (36.36%), Postives = 64/132 (48.48%), Query Frame = 1


Query: 1   MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKS 60
           MA  + +TS  LYH S       I  P    +H           HRR+++LL+     + 
Sbjct: 3   MALSNPTTSTNLYHYS-------ILSPFSPPYHL----------HRRNTVLLASPRRLRR 62

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALD-- 120
                    PP  DPPP ED  +L+G     ++  DRV+IF AV FWM LFFW +  D  
Sbjct: 63  LAVAGGPPSPPGPDPPPPEDTTQLEGLVGAVTRVQDRVKIFLAVFFWMFLFFWVTVTDGT 117

Query: 121 GKNRPNKGSRFR 131
           GK +  KGSRF+
Sbjct: 123 GKGKGKKGSRFK 117

[Close]

BLAST of CmaCh08G006200 vs. TAIR10
Match: AT1G52550.1 (AT1G52550.1 unknown protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-11
Identity = 46/129 (35.66%), Postives = 62/129 (48.06%), Query Frame = 1


Query: 7   STSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAA 66
           S+SN   H  R    P  +   FS F +      SPL  +   L+ +  P  + AV    
Sbjct: 10  SSSNLYLHRCRK-NHPLPSPSFFSPFRS------SPLPSQTLFLVPTPKPVRRIAVAPLG 69

Query: 67  VRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK-----N 126
              PP  DPPP ++   L     + S   DRV+IF +VL W+SLFFW SAL G+      
Sbjct: 70  PPTPPSPDPPPPKNTTELTSLVGVASMIQDRVKIFLSVLIWISLFFWASALQGRGSKGNG 129

Query: 127 RPNKGSRFR 131
           +  KGSRF+
Sbjct: 130 KGKKGSRFK 131

[Close]

BLAST of CmaCh08G006200 vs. NCBI nr
Match: gi|659122387|ref|XP_008461116.1| (PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 4.2e-41
Identity = 88/123 (71.54%), Postives = 98/123 (79.67%), Query Frame = 1


Query: 9   SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVR 68
           S +L+  S +V A +IA+PL S+FH R +I FSP   R S L  S N  AKS VC+AAVR
Sbjct: 3   STSLHRSSHSVAASSIALPLCSTFHFRSKICFSPPRRRLSPLFFSSNSYAKSVVCSAAVR 62

Query: 69  PPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSR 128
           PPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFWMSLFFWTSALDGKNRPNKGSR
Sbjct: 63  PPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGKNRPNKGSR 122

Query: 129 FRR 132
           FRR
Sbjct: 123 FRR 125

[Close]

BLAST of CmaCh08G006200 vs. NCBI nr
Match: gi|449436158|ref|XP_004135861.1| (PREDICTED: uncharacterized protein LOC101209839 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 6.1e-40
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 1


Query: 9   SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRR-SSLLLSFNPCAKSAVCTAAV 68
           S +L+  S++V A +IA+PL S+FH R EI FS LH RR S L  S N  A+S VC+AAV
Sbjct: 5   STSLHRSSQSVAASSIALPLCSTFHLRSEICFS-LHRRRLSPLFFSSNSYAESVVCSAAV 64

Query: 69  RPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGS 128
           RPPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFWMSLFFWTSALDG+NRPNKGS
Sbjct: 65  RPPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGRNRPNKGS 124

Query: 129 RFRR 132
           RFRR
Sbjct: 125 RFRR 127

[Close]

BLAST of CmaCh08G006200 vs. NCBI nr
Match: gi|802603627|ref|XP_012073182.1| (PREDICTED: formin-like protein 14 [Jatropha curcas])

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-18
Identity = 62/134 (46.27%), Postives = 77/134 (57.46%), Query Frame = 1


Query: 18  AVTAPAIAIPLFSSFHARPEI--SFSPLH-HRRSSLLLSFNPCA-------------KSA 77
           A+ +P  A    S+ +ARP+    F+PL+     SLL   NP               +S 
Sbjct: 2   AILSPPPATTTTSTTYARPQSFPKFNPLNLQSHPSLLFPINPSRPFLPPRPNPNARLRSL 61

Query: 78  VCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKN 132
               + +PP   DPPP++DP+R KG  A FS+F DRVQIF AVLFWMSLFFW SA  G+N
Sbjct: 62  YSALSPQPPTQPDPPPEKDPVRPKGIAATFSRFQDRVQIFLAVLFWMSLFFWASASGGRN 121

[Close]

BLAST of CmaCh08G006200 vs. NCBI nr
Match: gi|225442973|ref|XP_002267834.1| (PREDICTED: probable methyltransferase PMT11 [Vitis vinifera])

HSP 1 Score: 99.0 bits (245), Expect = 6.6e-18
Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 1


Query: 38  ISFSPLHHRRSSLLLSFNPCA--------KSAVCTAAVRPPPDSDPPPDEDPIRLKGFPA 97
           +SF    HR S   + F+P +        +    T +  PPP+SDPPP  DP+ L G  A
Sbjct: 34  LSFPISCHRSSPSPIRFHPPSLPPRTASLRRRASTPSPPPPPESDPPPQNDPVPLTGLVA 93

Query: 98  IFSKFGDRVQIFFAVLFWMSLFFWTSALDGKN--RPNKGSRFRR 132
            FS+F D +QIFFAVLFW+SLFFW SA DG+N  RPNKGSR RR
Sbjct: 94  TFSRFQDSIQIFFAVLFWLSLFFWASAWDGRNGGRPNKGSRLRR 137

[Close]

BLAST of CmaCh08G006200 vs. NCBI nr
Match: gi|357468203|ref|XP_003604386.1| (transmembrane protein, putative [Medicago truncatula])

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-16
Identity = 60/117 (51.28%), Postives = 70/117 (59.83%), Query Frame = 1


Query: 28  LFSSFHA-RPEISFSPLHHRRSSLLLS------FNPCAKSAV------CTAAVRPPPDSD 87
           LF+SF    P  S SP     SSL LS      F P + S+       C AA   PP   
Sbjct: 10  LFTSFTTLSPSPSPSPSPSPSSSLSLSTSSNRSFQPLSSSSTSLRRLRCRAASPNPPP-- 69

Query: 88  PPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 132
           PPP+ +   L+G  A  SKF DRVQIFFAVLFWM+LFFW SA DG+NRPNKGS+FR+
Sbjct: 70  PPPENESTELQGVVASLSKFQDRVQIFFAVLFWMTLFFWASAWDGRNRPNKGSKFRK 124

The following BLAST results are available for this feature:

BLAST of CmaCh08G006200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh08G006200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8T0_CUCSA	4.3e-40	71.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432560 PE=4 SV=1	[more]
A0A067KLQ9_JATCU	7.1e-19	46.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06143 PE=4 SV=1	[more]
D7U123_VITVI	4.6e-18	50.96	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06800 PE=4 SV=...	[more]
G7JGZ0_MEDTR	8.7e-17	51.28	Transmembrane protein, putative OS=Medicago truncatula GN=MTR_4g010270 PE=4 SV=1	[more]
M5XBA0_PRUPE	7.3e-16	56.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013224mg PE=4 SV=1	[more]

BLAST of CmaCh08G006200 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15780.1	2.3e-13	36.36	unknown protein	[more]
AT1G52550.1	2.8e-11	35.66	unknown protein	[more]

BLAST of CmaCh08G006200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122387\|ref\|XP_008461116.1\|	4.2e-41	71.54	PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo]	[more]
gi\|449436158\|ref\|XP_004135861.1\|	6.1e-40	71.77	PREDICTED: uncharacterized protein LOC101209839 [Cucumis sativus]	[more]
gi\|802603627\|ref\|XP_012073182.1\|	1.0e-18	46.27	PREDICTED: formin-like protein 14 [Jatropha curcas]	[more]
gi\|225442973\|ref\|XP_002267834.1\|	6.6e-18	50.96	PREDICTED: probable methyltransferase PMT11 [Vitis vinifera]	[more]
gi\|357468203\|ref\|XP_003604386.1\|	1.2e-16	51.28	transmembrane protein, putative [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G006200.1	CmaCh08G006200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37706	FAMILY NOT NAMED	coord: 10..131 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G006200	Cucsa.105400	Cucumber (Gy14) v1	cgycmaB0241
CmaCh08G006200	Csa7G432560	Cucumber (Chinese Long) v2	cmacuB914
CmaCh08G006200	ClCG09G002890	Watermelon (Charleston Gray)	cmawcgB787
CmaCh08G006200	CmoCh08G006070	Cucurbita moschata (Rifu)	cmacmoB913
CmaCh08G006200	Lsi02G027150	Bottle gourd (USVL1VR-Ls)	cmalsiB822
CmaCh08G006200	Cp4.1LG17g08900	Cucurbita pepo (Zucchini)	cmacpeB917
CmaCh08G006200	CsaV3_7G032440	Cucumber (Chinese Long) v3	cmacucB1084
CmaCh08G006200	Bhi09G000022	Wax gourd	cmawgoB1124
CmaCh08G006200	CsGy7G018880	Cucumber (Gy14) v2	cgybcmaB973
CmaCh08G006200	Carg23141	Silver-seed gourd	carcmaB0193

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G006200	Cucurbita pepo (Zucchini)	cmacpeB902
CmaCh08G006200	Cucurbita pepo (Zucchini)	cmacpeB923
CmaCh08G006200	Melon (DHL92) v3.6.1	cmamedB922
CmaCh08G006200	Silver-seed gourd	carcmaB0284
CmaCh08G006200	Silver-seed gourd	carcmaB1425
CmaCh08G006200	Watermelon (97103) v2	cmawmbB941
CmaCh08G006200	Wax gourd	cmawgoB1104
CmaCh08G006200	Cucurbita maxima (Rimu)	cmacmaB382
CmaCh08G006200	Wild cucumber (PI 183967)	cmacpiB934
CmaCh08G006200	Cucurbita moschata (Rifu)	cmacmoB896
CmaCh08G006200	Melon (DHL92) v3.5.1	cmameB824
CmaCh08G006200	Watermelon (97103) v1	cmawmB857