CsGy7G018880 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTAAAACCGTTTTCTAAGCAATATTTAGATAAAATTGGGCCGAGTTGACCCATAGAAGGCACAAACATGGGCCGGCCCATGTGGCTGAAGCCCGTAATGTGAAGGAATAACTAACAAGTGAACAGAAAATTGAATCGTTGTTGCTTTCTTTCTCCTCTCACAATGGCAATACTTTCGACCTCTCTCCACCGTTCTTCACAGTCCGTTGCCGCCTCTTCAATCGCCCTTCCTCTCTGTTCAACCTTTCATCTTCGGTCGGAAATCTGCTTCTCTTTGCACCGTCGCCGCCTGTCACCTCTCTTCTTCTCCTCCAATTCTTATGCCGAATCCGTCGTTTGCAGCGCAGCAGTACGGCCACCACCGGATTCCGATCCGCCTCCCGAGGAGGATCCCGTTCGTTTAACAGGTTACTATTCTTTGCTGATGATGTCTCCATTTAGTTCACTTTATTGACTGAATTGTTCGTGATGAGGCCTAAAAAATTTAGTGCGTAGAGCTTGGTTTTTTCTTTTTCGTTTTTGTACCATATGCGGAGAAGCCTACGTTATCTTTATTTGTATGGAATTGCTTTGATAATAGAAAATGAAAATTATTAGCTCCTGAATTTTGCTTGGCGTCTGCTAGTGGTGGTTCGCTGCTACAATTAGTAACAGATTTATTTATATTTGAATTCCTGGTTGTTTAGAGCTAATCATCCACAAATAATATTGTTCGTGTTTTTGGTCATCCGGAAATTTACTATGTCTTCGGATGCATATGGGCTTTAGCCATAGTATTAACTTCTTATGGGTTATTTTGGAAGTTTGTTAAGTAGGAAATTTTGCTCAACACGTTTTAGATACGTAAAAGTCATACCACAAATATTCATTTTGGTTCATGATGCTTAACATATGGGTTCTTAATATGAAATAGGATGGAAATGACTTTGTGGTGATTATCTAGGTCTTCTACCTTGCATTGGTGCTCTTTCTAAACTTTTTTTCTGTGAATATATTTCCTTGAATAACCAATTTAAGTGTTTTCTGTAATTTTCTTGCAATTCTCGGAAATTGCTTATCTTCATATTTTCTACTAATCTCTTAATAATGAATCTGTGCTTTTCTTTAATAAAAAGGAATGGAGAGACCGAGAAAGTGAAGAGTTTTTCATTAGTTGTCATGTTTTTAGAGAGAAAGAATCATTTTGGAGTGAATATGTGATAAAGTAGATGAGGTGATTATTGACTGTCGGTTTAATAGAGGAGAATCACTTTCTTACTTAATAAAAACAGAGAGACAGAAAGTGAAAGTTACAGTGTGTCATTTCTTTTAGAGAGAATCATTACAGGGTGAACATATTGATCAAAGTAGATAAAGTGGTTGTTGACCATGGGTTTAATAGAAAGGAGTCATTCTTTCTCATGTAATAAAAACGGAGAGACAGAGTAATTAAAGTGAGAGCCTTTTGTAAGTTATCATATTTTAAAAGAGAATCACTTTAGAGTGAACATGTTGTACAAAATAGATAAGGTGATTGATGACTGTTGGTTTAATATAAATGAATCGTTTCTTTCTCATACCATGAAAACGGAGAGACAAAGTAAAAGTCTTCCATAAGTTGTCATTTTCTTTAGACAGATTCATTTTAGGGTTATGTCGATCAAACTTCATGGTAGATAAGATGATTGTAGACCGTTTGTTTAGTAAAGAAATAATAGTTTCTTTCTTATTTAATTTAATAAAAATGGAGAGATAAGGAAACTGACGGGAATGCCTTTCATAAGTTGTCAATTTTTTAGAGAGAATCATTTTAGGGTATGATGTTCATCGGAATATACAAGAAGATTATTAAACGGAAACAGTTGGTAAAACTAAGGAATTCTACCAAGTTATTATATACTTTTAATTATTGAAATCAATACTATTTTTCCTGCTTGATAGTTCTTGTTCTAATATCGTTACTTGAGCAGGTTTACCGGCAATTTTTTCAAAATTTCAGGACAGAGTACAAATTTTCCTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTAGATGGGAGAAACAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAGACAAGCATTCTTTTGTAAAGGATTGTAGGTTTAGTATAAATAGTGGTAGACTACTTGATTATACTTGAGATATATTTCAGCCTTTGACGAGGTAGTAGGTAAAGCTTGCTCCACAGTGTTGATATTGATACCCTCCGCTGTATATTGTGTAGCCGCAAAGGAGATAAGGAATGGGTATGAAACAAATTAAAGCAAAACTGTCATGGAAAGTCGTATTTTGTATTGTATTATATTCTTATCAAGTGTCTTGTATATTTCTTGAACCCCCCTCCCCCCTCCTATATTGAATAACATAACCAAGTGAATTGAAGATACTCTGTTGTAACGGACTAATCTTGTTGTTGTCCTTGGACCTGCAGGGATCAGGCTAATATCTTCTCTGTATGGTTGCAGTTTTAATGGATGTCTCTTGAGGGACAACTACTGACGAGTCTTTCTTATTAGGTATTATTAAATTACAAATTTCTATAGGAATTTGGTTGATGGATGTATTAGAATTGTGTACAGGGAAGTTGGAGCCTCAGTGATGGGAGAAATGAGTGATGGGTTGGTTCGATATTAAGAAATGAATGCCACTATGTGTTTGACACGTTGGTAATAGTTCTAAGTTTTGATTGGTCACATTGTAATGGGGAAGTGTTATGAAAAGGTGAAAGAGATGGTTGGTTGGAGGAGAAAGAGAAGTGATTTCTAATTATTGGATCATTTCAATTCAATTCAAATGCTTTTTTTCTTTGTTAAAATCTTTTTATTTTGTTATAATGGGGACAGGGAAG ATTTAAAACCGTTTTCTAAGCAATATTTAGATAAAATTGGGCCGAGTTGACCCATAGAAGGCACAAACATGGGCCGGCCCATGTGGCTGAAGCCCGTAATGTGAAGGAATAACTAACAAGTGAACAGAAAATTGAATCGTTGTTGCTTTCTTTCTCCTCTCACAATGGCAATACTTTCGACCTCTCTCCACCGTTCTTCACAGTCCGTTGCCGCCTCTTCAATCGCCCTTCCTCTCTGTTCAACCTTTCATCTTCGGTCGGAAATCTGCTTCTCTTTGCACCGTCGCCGCCTGTCACCTCTCTTCTTCTCCTCCAATTCTTATGCCGAATCCGTCGTTTGCAGCGCAGCAGTACGGCCACCACCGGATTCCGATCCGCCTCCCGAGGAGGATCCCGTTCGTTTAACAGGTTTACCGGCAATTTTTTCAAAATTTCAGGACAGAGTACAAATTTTCCTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTAGATGGGAGAAACAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAGACAAGCATTCTTTTGTAAAGGATTGTAGGTTTAGTATAAATAGTGGTAGACTACTTGATTATACTTGAGATATATTTCAGCCTTTGACGAGGTAGTAGGTAAAGCTTGCTCCACAGTGTTGATATTGATACCCTCCGCTGTATATTGTGTAGCCGCAAAGGAGATAAGGAATGGGTATGAAACAAATTAAAGCAAAACTGTCATGGAAAGTCGTATTTTGTATTGTATTATATTCTTATCAAGTGTCTTGTATATTTCTTGAACCCCCCTCCCCCCTCCTATATTGAATAACATAACCAAGTGAATTGAAGATACTCTGTTGTAACGGACTAATCTTGTTGTTGTCCTTGGACCTGCAGGGATCAGGCTAATATCTTCTCTGTATGGTTGCAGTTTTAATGGATGTCTCTTGAGGGACAACTACTGACGAGTCTTTCTTATTAGGTATTATTAAATTACAAATTTCTATAGGAATTTGGTTGATGGATGTATTAGAATTGTGTACAGGGAAGTTGGAGCCTCAGTGATGGGAGAAATGAGTGATGGGTTGGTTCGATATTAAGAAATGAATGCCACTATGTGTTTGACACGTTGGTAATAGTTCTAAGTTTTGATTGGTCACATTGTAATGGGGAAGTGTTATGAAAAGGTGAAAGAGATGGTTGGTTGGAGGAGAAAGAGAAGTGATTTCTAATTATTGGATCATTTCAATTCAATTCAAATGCTTTTTTTCTTTGTTAAAATCTTTTTATTTTGTTATAATGGGGACAGGGAAG ATGGCAATACTTTCGACCTCTCTCCACCGTTCTTCACAGTCCGTTGCCGCCTCTTCAATCGCCCTTCCTCTCTGTTCAACCTTTCATCTTCGGTCGGAAATCTGCTTCTCTTTGCACCGTCGCCGCCTGTCACCTCTCTTCTTCTCCTCCAATTCTTATGCCGAATCCGTCGTTTGCAGCGCAGCAGTACGGCCACCACCGGATTCCGATCCGCCTCCCGAGGAGGATCCCGTTCGTTTAACAGGTTTACCGGCAATTTTTTCAAAATTTCAGGACAGAGTACAAATTTTCCTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTAGATGGGAGAAACAGACCTAATAAGGGCTCTCGATTTAGACGATAG MAILSTSLHRSSQSVAASSIALPLCSTFHLRSEICFSLHRRRLSPLFFSSNSYAESVVCSAAVRPPPDSDPPPEEDPVRLTGLPAIFSKFQDRVQIFLAVLFWMSLFFWTSALDGRNRPNKGSRFRR
BLAST of CsGy7G018880 vs. NCBI nr
Match: XP_004135861.1 (PREDICTED: uncharacterized protein LOC101209839 [Cucumis sativus] >KGN45274.1 hypothetical protein Csa_7G432560 [Cucumis sativus]) HSP 1 Score: 201.1 bits (510), Expect = 2.3e-48 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CsGy7G018880 vs. NCBI nr
Match: XP_008461116.1 (PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo]) HSP 1 Score: 146.0 bits (367), Expect = 8.9e-32 Identity = 100/123 (81.30%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of CsGy7G018880 vs. NCBI nr
Match: XP_023004358.1 (uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]) HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25 Identity = 78/124 (62.90%), Postives = 88/124 (70.97%), Query Frame = 0
BLAST of CsGy7G018880 vs. NCBI nr
Match: XP_023513765.1 (uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 118.2 bits (295), Expect = 2.0e-23 Identity = 89/124 (71.77%), Postives = 99/124 (79.84%), Query Frame = 0
BLAST of CsGy7G018880 vs. NCBI nr
Match: XP_022145821.1 (uncharacterized protein LOC111015178 [Momordica charantia]) HSP 1 Score: 109.4 bits (272), Expect = 9.2e-21 Identity = 76/119 (63.87%), Postives = 84/119 (70.59%), Query Frame = 0
BLAST of CsGy7G018880 vs. TAIR10
Match: AT1G52550.1 (unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of CsGy7G018880 vs. TrEMBL
Match: tr|A0A0A0K8T0|A0A0A0K8T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.5e-48 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CsGy7G018880 vs. TrEMBL
Match: tr|A0A1S3CE06|A0A1S3CE06_CUCME (uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 5.9e-32 Identity = 100/123 (81.30%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of CsGy7G018880 vs. TrEMBL
Match: tr|A0A2P4NCE0|A0A2P4NCE0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_14494 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13 Identity = 40/46 (86.96%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of CsGy7G018880 vs. TrEMBL
Match: tr|M5XBA0|M5XBA0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G085400 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12 Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of CsGy7G018880 vs. TrEMBL
Match: tr|G7JGZ0|G7JGZ0_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11420506 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12 Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |