Carg23141 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTACTATTCTTTGCTGGTGTTTTTCGTGCTTAATTCATTTATTGGACTGAACTGCTCGTGTTAAGGCTTAGAAATTTTAGTGCATAGAGCTTGGTTATGTGTTTACTTATTTCTATTTCGTTTTTCCATGAACGGTTGTGGAGTTTGCGTTATCCTTATCCCTATAGCATGCCTTCATAACCGAAAATAAAAATTATTAGCTCCTGAATTTTGCTCGGATTGTGCTATACTGCTAGTGGTCCTTATTTCTCGATTGCTACAACTAATAACAGTGTTTTTTATCCATTTGAGTTCTGGTTGTTTAGAAGCTAATCATCCATAAATATTTTTCGTTTTTTTAGTCATCTGGAAATTTGTTCCGCTAGGTCCGCGGATACATATGTGCTTAGCAATTATATCTAATTTTCTCGTGATTTATTTTGAAAGTTTGTTAGATAGAAAGTTCTGCTCAATACGTCATAGATATGTCGAAATCTCAACGGAAAAGAAATAATGGTGTTTGGAGTGTGCGATTCATTAGGTTCAACTACTCCGTAATCATTTTTCATTAACCGCGTCAGCGAAGTTCAATTGTCAATTTTAATGAGCAATTCGTAAACATATCTGAGTATAGATGTTTACCTGCAAATATAAAGCCATTTCCCCCTCCATAACAACAGTTATATATATTTGCTTTCGTGCAAGAATCATAGCGATTTCTTAGGATTCAACTTTCCGATTGTTAGATGAAGTGTCTTCTTCTTTTCTAGCCCCTTATCGTATAGCTGCTTGGCTTGGATAACTTAGGCCTTTGATAATCATTTGGCTTCCGGAAATTGTGTTTGATTTCTTATTAATTCTCTACTATGAGTTTCATCTTTCTTAACCAAACACTTAAAGTTTTAGCCAAATTCCAAAAACAGTAGCATGTTTTAATTTTTTTTTTTTTTAAGTTTTCAAAACTTGACTGGTTTTTTAAAGCATAGATAACAAAATAAAGGAATTCATAGGCCAAAGTAATATTTATAGACTTAAATTTCAAAAATCAAACTGTTATCAAACAAGATTTTAATTTTTCTTTCAATTCATTTTTTGACACTCCCTTGGCCAAATATTAATTTTGGTTCATGATGCCTAACATGTGATCATTTAGTATGAAATAGGATGAATTGGAAAGGATATTCCGGTGATTTGAGACGTATCTAGGTTTTCTACCTTAAATTAGCTCTTTCCAAACTTCTTTTTTGTAACTATAGCTTCTTGATTATAGCCAATTGGAGTGCTTTTCTGCAGTTTTCTTGCATTCTGGGAGATTGTTAAGCTTCATCGTCTGTATTAGATTAAAACTGTTGGTGTTGGTAATACTCTGAAATTCTACCGAGTCATTATATATTTTTGATGTTAGAACTTAGTACTAATTTTCTTGCATGTAATTCATATTGTAACTTGTTTGGTTTGAATTGCTTTGATCATGCTGAGGTTCTTTGATGTGGATGAACTATGTTTCCTTATTTCTCTTCGTATTATAATTTGAGCAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAAAGCATTCTTTTGTAAAGGATTGCAGGTTAATATAAATAGTGTTAAGCTGCTTGATTTTAACTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTCAATTAGATGTTGATACCAAAAGTAAACTGTCATGGAAAGCCCTATTCTGTATCATATTCTTATCAAGTGTCTTAAAAATTTCCTGAATCCTTCTCTAATTATTAACCTTTTTTTCTTTTTTGAACCTTTTCTTGATTTGTGC ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAAAGCATTCTTTTGTAAAGGATTGCAGGTTAATATAAATAGTGTTAAGCTGCTTGATTTTAACTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTCAATTAGATGTTGATACCAAAAGTAAACTGTCATGGAAAGCCCTATTCTGTATCATATTCTTATCAAGTGTCTTAAAAATTTCCTGAATCCTTCTCTAATTATTAACCTTTTTTTCTTTTTTGAACCTTTTCTTGATTTGTGC ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAG MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
BLAST of Carg23141 vs. NCBI nr
Match: XP_022959617.1 (uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata]) HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Carg23141 vs. NCBI nr
Match: XP_023513765.1 (uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39 Identity = 113/131 (86.26%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Carg23141 vs. NCBI nr
Match: XP_023004358.1 (uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]) HSP 1 Score: 171.0 bits (432), Expect = 2.7e-39 Identity = 99/131 (75.57%), Postives = 100/131 (76.34%), Query Frame = 0
BLAST of Carg23141 vs. NCBI nr
Match: XP_022145821.1 (uncharacterized protein LOC111015178 [Momordica charantia]) HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22 Identity = 96/119 (80.67%), Postives = 100/119 (84.03%), Query Frame = 0
BLAST of Carg23141 vs. NCBI nr
Match: XP_008461116.1 (PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 1.9e-21 Identity = 98/123 (79.67%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Carg23141 vs. TAIR10
Match: AT1G52550.1 (unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 6.1e-06 Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0
BLAST of Carg23141 vs. TrEMBL
Match: tr|A0A1S3CE06|A0A1S3CE06_CUCME (uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21 Identity = 98/123 (79.67%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Carg23141 vs. TrEMBL
Match: tr|A0A0A0K8T0|A0A0A0K8T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.2e-21 Identity = 81/123 (65.85%), Postives = 90/123 (73.17%), Query Frame = 0
BLAST of Carg23141 vs. TrEMBL
Match: tr|G7JGZ0|G7JGZ0_MEDTR (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=11420506 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.3e-12 Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of Carg23141 vs. TrEMBL
Match: tr|A0A1S2YM95|A0A1S2YM95_CICAR (uncharacterized protein LOC101493454 OS=Cicer arietinum OX=3827 GN=LOC101493454 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.1e-12 Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 0
BLAST of Carg23141 vs. TrEMBL
Match: tr|B9RV61|B9RV61_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0899870 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.2e-11 Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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