CmaCh08G002660 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G002660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_11
Location	Cma_Chr08 : 1522867 .. 1523731 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATATATATATATATATATATATATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCCCCATTGCTAATCTACTTCAAATTTCTCTCAATTTCTCCACTATTCATCTTCGATTTCTCCTTTTTCCTCCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTAGTCGTCACCTCTGATTTGAAGTCCATTTACGATGTTCTTTCAGCTCACGGTCTACCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCCGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGGTCTTGATCTAGTTCTTCATTTTCTCCTTTCTCTCTTTCATTACTGTATCATATATTGTATGGTTGTTTGGTTTCAATTTGATTCAATTTTTTAGAGCTTTGGAATTTGATTCAATTTGATTCATATGCAGAATCAACACAGGAAAATTGGGAACCAATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

mRNA sequence

AGATATATATATATATATATATATATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCCCCATTGCTAATCTACTTCAAATTTCTCTCAATTTCTCCACTATTCATCTTCGATTTCTCCTTTTTCCTCCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTAGTCGTCACCTCTGATTTGAAGTCCATTTACGATGTTCTTTCAGCTCACGGTCTACCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCCGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCAATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

Coding sequence (CDS)

ATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTAGTCGTCACCTCTGATTTGAAGTCCATTTACGATGTTCTTTCAGCTCACGGTCTACCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCCGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCAATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

Protein sequence

MLFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVKVA

Homology

[Close]

BLAST of CmaCh08G002660 vs. TrEMBL
Match: A0A0A0K6Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372350 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.5e-63
Identity = 128/164 (78.05%), Postives = 141/164 (85.98%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVVVT--SDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           +LFL F FLYFT SMA +P  + +  S   S YDVL +HGLPKGLLPKGI DY+   ++G
Sbjct: 7   ILFLWFSFLYFTSSMA-DPHSLNSYYSRSNSFYDVLLSHGLPKGLLPKGITDYQIDADTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RFVVFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFVVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKI--GNQFVE 161
           GVIYFDVGVVFKQFSQSLFETPP CV  SK+QHRKI  GNQFV+
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNSKSQHRKIGNGNQFVK 169

[Close]

BLAST of CmaCh08G002660 vs. TrEMBL
Match: A0A067LDG7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15108 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 95/151 (62.91%), Postives = 115/151 (76.16%), Query Frame = 1


Query: 4   LLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVF 63
           +L FF   +  + + P V+   + +S+YDVL  HGLP GLLPKG++D+   E++G F V 
Sbjct: 1   MLPFFPLISLILLSIPSVIPLDNKQSVYDVLKEHGLPMGLLPKGVKDFRI-EDTGHFEVH 60

Query: 64  LDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYF 123
           LD  CNA FEN+LHY+ NV+GTLSYGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+IYF
Sbjct: 61  LDEACNAKFENELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYF 120

Query: 124 DVGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           DVGVV KQFS SLFETP EC +  + Q   I
Sbjct: 121 DVGVVSKQFSLSLFETPRECTAVREGQPEAI 150

[Close]

BLAST of CmaCh08G002660 vs. TrEMBL
Match: M5VP51_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011328mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 1


Query: 28  KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLS 87
           +S+YDVL AHGLP GLLPKG+ D+E  +E GRF V LD+ CNA FE+QLHY+ NV+GTLS
Sbjct: 66  RSVYDVLRAHGLPMGLLPKGVVDFEVDDE-GRFQVHLDQACNAKFESQLHYDRNVSGTLS 125

Query: 88  YGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSAS 147
           +GQIG+LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV+KQFS SLFETPP C +A+
Sbjct: 126 FGQIGSLSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVYKQFSLSLFETPPVCTAAT 185

Query: 148 KNQHRKIGNQFV-ESGSVK 166
            +    IG  F  ESG ++
Sbjct: 186 TSV-EAIGTVFEGESGKLR 202

[Close]

BLAST of CmaCh08G002660 vs. TrEMBL
Match: W9RDZ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015854 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-46
Identity = 96/162 (59.26%), Postives = 118/162 (72.84%), Query Frame = 1


Query: 4   LLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVF 63
           L F  L       + P+  V +   ++YD L  HGLP GLLPKG++D+E  +E+G F V 
Sbjct: 7   LCFVILSMATRSDSRPQKKVAATT-TVYDALKQHGLPMGLLPKGVKDFEI-DENGNFQVH 66

Query: 64  LDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYF 123
           LD+ CNA FE++LHY+ NV+GTLSYGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+IYF
Sbjct: 67  LDKACNAKFESELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYF 126

Query: 124 DVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVK 166
           DVGVVFKQFS SLFE+PPECV+          +   ESG ++
Sbjct: 127 DVGVVFKQFSLSLFESPPECVAVRTLDRNDFSDSKRESGKLR 166

[Close]

BLAST of CmaCh08G002660 vs. TrEMBL
Match: A0A061DMW7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002665 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-45
Identity = 92/144 (63.89%), Postives = 115/144 (79.86%), Query Frame = 1


Query: 2   LFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFV 61
           +FL F F++           +V  +  SIY++L AHGLP GLLPKGI  ++F++ +GRF 
Sbjct: 8   VFLYFIFIF----------TIVNGEQDSIYEILKAHGLPMGLLPKGITRFDFND-TGRFE 67

Query: 62  VFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVI 121
           V LD+ CNA FE++LHY+ NV+GTLSYGQIGALSGI+AQ+LFLWFPVKGIRVDIPSSG+I
Sbjct: 68  VHLDQACNAKFESELHYDRNVSGTLSYGQIGALSGITAQELFLWFPVKGIRVDIPSSGLI 127

Query: 122 YFDVGVVFKQFSQSLFETPPECVS 146
           YFDVGVVFKQFS SLFETP +C++
Sbjct: 128 YFDVGVVFKQFSLSLFETPRDCMA 140

[Close]

BLAST of CmaCh08G002660 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538)

HSP 1 Score: 171.0 bits (432), Expect = 6.1e-43
Identity = 74/120 (61.67%), Postives = 99/120 (82.50%), Query Frame = 1


Query: 25  SDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTG 84
           S+ ++IY++L A+GLP G+ PKG+R++ F  E+GRF V+L++ C A +E ++HY+ N+TG
Sbjct: 26  SETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITG 85

Query: 85  TLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECV 144
           T+   QI  LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV KQ+S SLFETP +CV
Sbjct: 86  TIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCV 145

[Close]

BLAST of CmaCh08G002660 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 154.8 bits (390), Expect = 4.5e-38
Identity = 74/136 (54.41%), Postives = 102/136 (75.00%), Query Frame = 1


Query: 23  VTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNV 82
           V ++ +SI ++L A+GLP GL PKG++ +  + E+GRF V+L++ C A +E +LHY+  V
Sbjct: 23  VIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIV 82

Query: 83  TGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPE 142
           +GT+ Y QI  LSGISAQ+LFLW  VKGIRVD+PSSG+I+FDVGV+ KQ+S SLFETP +
Sbjct: 83  SGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRD 142

Query: 143 CVSASKNQHRKIGNQF 159
           CV A +     IG+ F
Sbjct: 143 CV-AVRGDAEFIGSVF 157

[Close]

BLAST of CmaCh08G002660 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 1


Query: 5   LFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFL 64
           LFF +    S    P++    D  S YD L    LP G++PKG+ ++    ++GRF V L
Sbjct: 7   LFFLIIVLFSSILFPQLSSLPD-PSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVAL 66

Query: 65  DRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFD 124
              C+A FENQ H++ N++G LS G+IG LSG++ ++LFLWF VKGI VD  SSG+I+FD
Sbjct: 67  PVPCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFD 126

Query: 125 VGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           VGV  KQ S SLFE+P +C +A+++Q R +
Sbjct: 127 VGVADKQLSLSLFESPRDC-TAAESQPRAV 154

[Close]

BLAST of CmaCh08G002660 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 124.8 bits (312), Expect = 5.0e-29
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 1


Query: 29  SIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSY 88
           +++DVL + GLP GLLP+ +  Y  H + GR  VFL   C A FE  +H+E  V G LSY
Sbjct: 28  TVHDVLRSEGLPAGLLPQEVDSYILHND-GRLEVFLAAPCYAKFETNVHFEAVVRGNLSY 87

Query: 89  GQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPEC 144
           G +  + G+S ++LFLW  VK I V+ P+SGVI FD+GV FKQ S SLFE PP+C
Sbjct: 88  GSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKC 141

[Close]

BLAST of CmaCh08G002660 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538)

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-27
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           +L LL    + TPS  +           SI ++L A GLP GL P  +  Y   +++G  
Sbjct: 4   LLLLLLLVPFITPSSQS-----------SIRNLLEARGLPGGLFPDNVESYSLDDKTGEL 63

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
            V L   C A FEN+++++  +   LSYG +  L G++ ++LFLW PVKGI V+ PSSG+
Sbjct: 64  EVQLQNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGL 123

Query: 121 IYFDVGVVFKQFSQSLFETPPEC 144
           + FD+GV  KQ S+SLFE PP C
Sbjct: 124 VLFDIGVAHKQISRSLFEDPPVC 135

[Close]

BLAST of CmaCh08G002660 vs. NCBI nr
Match: gi|659092797|ref|XP_008447224.1| (PREDICTED: uncharacterized protein LOC103489718 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-64
Identity = 129/164 (78.66%), Postives = 142/164 (86.59%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVV--VTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           M FL F FLYFT S+A +P  +    S   SIYDVL AHGLPKGLLPKG+RDYEF  ++G
Sbjct: 7   MPFLWFSFLYFTSSLA-DPHSLNYFYSPSNSIYDVLLAHGLPKGLLPKGVRDYEFDVDTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RF+VFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFLVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKI--GNQFVE 161
           GVIYFDVGVVFKQFSQSLFETPP CV  +K+QHRKI  GNQFV+
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNTKSQHRKIGNGNQFVK 169

[Close]

BLAST of CmaCh08G002660 vs. NCBI nr
Match: gi|449465296|ref|XP_004150364.1| (PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 5.0e-63
Identity = 128/164 (78.05%), Postives = 141/164 (85.98%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVVVT--SDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           +LFL F FLYFT SMA +P  + +  S   S YDVL +HGLPKGLLPKGI DY+   ++G
Sbjct: 7   ILFLWFSFLYFTSSMA-DPHSLNSYYSRSNSFYDVLLSHGLPKGLLPKGITDYQIDADTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RFVVFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFVVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKI--GNQFVE 161
           GVIYFDVGVVFKQFSQSLFETPP CV  SK+QHRKI  GNQFV+
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNSKSQHRKIGNGNQFVK 169

[Close]

BLAST of CmaCh08G002660 vs. NCBI nr
Match: gi|764528643|ref|XP_011458136.1| (PREDICTED: uncharacterized protein LOC101296442 [Fragaria vesca subsp. vesca])

HSP 1 Score: 196.1 bits (497), Expect = 5.0e-47
Identity = 92/132 (69.70%), Postives = 112/132 (84.85%), Query Frame = 1


Query: 19  PRVVVTSDLK---SIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQ 78
           P + +TSD K   S+Y+VL AHGLP GLLPKG+  +E  +E GRF V LD+ CNA FE++
Sbjct: 21  PIMTITSDSKPPPSVYEVLRAHGLPMGLLPKGVTKFEI-DEGGRFQVHLDQACNAKFESE 80

Query: 79  LHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQS 138
           LHY+ NV+GTLSYG+IGALSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV+KQFS S
Sbjct: 81  LHYDRNVSGTLSYGRIGALSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVYKQFSLS 140

Query: 139 LFETPPECVSAS 148
           LFETPP+C +A+
Sbjct: 141 LFETPPDCTAAT 151

[Close]

BLAST of CmaCh08G002660 vs. NCBI nr
Match: gi|802546433|ref|XP_012084857.1| (PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas])

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-46
Identity = 95/151 (62.91%), Postives = 115/151 (76.16%), Query Frame = 1


Query: 4   LLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVF 63
           +L FF   +  + + P V+   + +S+YDVL  HGLP GLLPKG++D+   E++G F V 
Sbjct: 1   MLPFFPLISLILLSIPSVIPLDNKQSVYDVLKEHGLPMGLLPKGVKDFRI-EDTGHFEVH 60

Query: 64  LDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYF 123
           LD  CNA FEN+LHY+ NV+GTLSYGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+IYF
Sbjct: 61  LDEACNAKFENELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYF 120

Query: 124 DVGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           DVGVV KQFS SLFETP EC +  + Q   I
Sbjct: 121 DVGVVSKQFSLSLFETPRECTAVREGQPEAI 150

[Close]

BLAST of CmaCh08G002660 vs. NCBI nr
Match: gi|595801468|ref|XP_007201828.1| (hypothetical protein PRUPE_ppa011328mg [Prunus persica])

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-46
Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 1


Query: 28  KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLS 87
           +S+YDVL AHGLP GLLPKG+ D+E  +E GRF V LD+ CNA FE+QLHY+ NV+GTLS
Sbjct: 66  RSVYDVLRAHGLPMGLLPKGVVDFEVDDE-GRFQVHLDQACNAKFESQLHYDRNVSGTLS 125

Query: 88  YGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSAS 147
           +GQIG+LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV+KQFS SLFETPP C +A+
Sbjct: 126 FGQIGSLSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVYKQFSLSLFETPPVCTAAT 185

Query: 148 KNQHRKIGNQFV-ESGSVK 166
            +    IG  F  ESG ++
Sbjct: 186 TSV-EAIGTVFEGESGKLR 202

The following BLAST results are available for this feature:

BLAST of CmaCh08G002660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh08G002660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6Z0_CUCSA	3.5e-63	78.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372350 PE=4 SV=1	[more]
A0A067LDG7_JATCU	1.7e-46	62.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15108 PE=4 SV=1	[more]
M5VP51_PRUPE	1.7e-46	68.35	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011328mg PE=4 SV=1	[more]
W9RDZ7_9ROSA	3.0e-46	59.26	Uncharacterized protein OS=Morus notabilis GN=L484_015854 PE=4 SV=1	[more]
A0A061DMW7_THECC	7.3e-45	63.89	Uncharacterized protein OS=Theobroma cacao GN=TCM_002665 PE=4 SV=1	[more]

BLAST of CmaCh08G002660 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07470.1	6.1e-43	61.67	Protein of unknown function, DUF538	[more]
AT3G07460.2	4.5e-38	54.41	Protein of unknown function, DUF538	[more]
AT5G16380.1	2.2e-32	46.67	Protein of unknown function, DUF538	[more]
AT5G54530.1	5.0e-29	51.30	Protein of unknown function, DUF538	[more]
AT1G61667.1	6.2e-27	41.26	Protein of unknown function, DUF538	[more]

BLAST of CmaCh08G002660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092797\|ref\|XP_008447224.1\|	5.9e-64	78.66	PREDICTED: uncharacterized protein LOC103489718 [Cucumis melo]	[more]
gi\|449465296\|ref\|XP_004150364.1\|	5.0e-63	78.05	PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus]	[more]
gi\|764528643\|ref\|XP_011458136.1\|	5.0e-47	69.70	PREDICTED: uncharacterized protein LOC101296442 [Fragaria vesca subsp. vesca]	[more]
gi\|802546433\|ref\|XP_012084857.1\|	2.5e-46	62.91	PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]	[more]
gi\|595801468\|ref\|XP_007201828.1\|	2.5e-46	68.35	hypothetical protein PRUPE_ppa011328mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G002660.1	CmaCh08G002660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 25..145 score: 8.9
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 30..138 score: 1.0
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 4..145 score: 6.41
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 2..166 score: 6.6
None	No IPR available	PANTHER	PTHR31676:SF8	SUBFAMILY NOT NAMED	coord: 2..166 score: 6.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G002660	Cucsa.388040	Cucumber (Gy14) v1	cgycmaB1079
CmaCh08G002660	Cla014869	Watermelon (97103) v1	cmawmB856
CmaCh08G002660	Csa7G372350	Cucumber (Chinese Long) v2	cmacuB914
CmaCh08G002660	MELO3C012725	Melon (DHL92) v3.5.1	cmameB834
CmaCh08G002660	ClCG09G008170	Watermelon (Charleston Gray)	cmawcgB786
CmaCh08G002660	CSPI07G15100	Wild cucumber (PI 183967)	cmacpiB934
CmaCh08G002660	CmoCh08G002620	Cucurbita moschata (Rifu)	cmacmoB913
CmaCh08G002660	CmoCh17G012830	Cucurbita moschata (Rifu)	cmacmoB888
CmaCh08G002660	Lsi02G021660	Bottle gourd (USVL1VR-Ls)	cmalsiB822
CmaCh08G002660	Cp4.1LG12g10550	Cucurbita pepo (Zucchini)	cmacpeB896
CmaCh08G002660	Cp4.1LG13g07070	Cucurbita pepo (Zucchini)	cmacpeB911
CmaCh08G002660	MELO3C012725.2	Melon (DHL92) v3.6.1	cmamedB933
CmaCh08G002660	CsaV3_7G026870	Cucumber (Chinese Long) v3	cmacucB1084
CmaCh08G002660	Cla97C09G170840	Watermelon (97103) v2	cmawmbB940
CmaCh08G002660	Bhi09G001017	Wax gourd	cmawgoB1130
CmaCh08G002660	CsGy7G013590	Cucumber (Gy14) v2	cgybcmaB973
CmaCh08G002660	Carg05088	Silver-seed gourd	carcmaB0112
CmaCh08G002660	Carg11493	Silver-seed gourd	carcmaB0021

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G002660	CmaCh17G013130	Cucurbita maxima (Rimu)	cmacmaB374

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G002660	Melon (DHL92) v3.6.1	cmamedB926
CmaCh08G002660	Melon (DHL92) v3.5.1	cmameB828