Carg11493 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11493
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function, DUF538
Location	Cucurbita_argyrosperma_scaffold_083 : 231145 .. 231835 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCCTCTTCCTCCGTGCTCTTCCTCTGCTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTACGATGTGCTATTGGCTCATGGCCTTCCCAAGGGGCTACTTCCGAAAGGGCGTCAGGGATTACCAATTCGATCAGGACACTGGCCGCTTTCTCGTGTTTTTGGATCAGGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCTCTCTTCGAAACCCCGCCTGAATGTGTCCCTAATTCTAAGGTTTTGATCTAATTTTTTAAAAAAATTTCATACTCTATTAGTTTCATTAGTTTGTGATTCTCTGCTGCTGGAAACTCGATCAATATTGGTGAAGTTGTCTGAGTTCAATTCAGTTGGATTGGGAGAAATGTCTGATTAACATGTGACTGTTTTTTTTCCCATCTGCAGACTCAACACAGAAAGATTGGGAATGGATTTGTTCAGCCAGTTCAAGTGAAAGTGGATTGA

mRNA sequence

ATGCTTCCCTCTTCCTCCGTGCTCTTCCTCTGCTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTACGATGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCTCTCTTCGAAACCCCGCCTGAATGTGTCCCTAATTCTAAGACTCAACACAGAAAGATTGGGAATGGATTTGTTCAGCCAGTTCAAGTGAAAGTGGATTGA

Coding sequence (CDS)

ATGCTTCCCTCTTCCTCCGTGCTCTTCCTCTGCTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTACGATGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCTCTCTTCGAAACCCCGCCTGAATGTGTCCCTAATTCTAAGACTCAACACAGAAAGATTGGGAATGGATTTGTTCAGCCAGTTCAAGTGAAAGTGGATTGA

Protein sequence

MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYDECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD

Homology

[Close]

BLAST of Carg11493 vs. NCBI nr
Match: XP_022954139.1 (uncharacterized protein At5g01610-like [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 6.0e-66
Identity = 138/173 (79.77%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD---------------------- 60
           MLPSSSVLFL FSFLYFTSSMAAPYALSDFTASKSIYD                      
Sbjct: 1   MLPSSSVLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFD 60

Query: 61  ------------ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVD 120
                       ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVD
Sbjct: 61  QDTGRFLVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVD 120

Query: 121 VPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD 140
           VPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
Sbjct: 121 VPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD 173

[Close]

BLAST of Carg11493 vs. NCBI nr
Match: XP_022991665.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 6.7e-65
Identity = 136/172 (79.07%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 1   MLPSSSVLFLCFSFLYFTSSMAAPYALSDFTASKSIYD---------------------- 60
           MLPSSS+LFL FSFLYFTSSMAAPYALSDFTASKSIYD                      
Sbjct: 1   MLPSSSMLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFD 60

Query: 61  ------------ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVD 120
                       ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVD
Sbjct: 61  QDTGRFLVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVD 120

Query: 121 VPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV 139
           VPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV
Sbjct: 121 VPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV 172

[Close]

BLAST of Carg11493 vs. NCBI nr
Match: XP_023549341.1 (uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 3.5e-58
Identity = 130/178 (73.03%), Postives = 130/178 (73.03%), Query Frame = 0


Query: 1   MLPSSSVLFLCF-----SFLYFTSSMAAPYALSDFTASKSIYD----------------- 60
           MLPSSSVLFL F            SMAAPYALSDFTASKSIYD                 
Sbjct: 1   MLPSSSVLFLWFXXXXXXXXXXXXSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVR 60

Query: 61  -----------------ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVK 120
                            ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVK
Sbjct: 61  DYQFDQDTGRFLVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVK 120

Query: 121 GIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD 140
            IRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD
Sbjct: 121 EIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVD 178

[Close]

BLAST of Carg11493 vs. NCBI nr
Match: XP_004150364.1 (PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus] >KGN44689.1 hypothetical protein Csa_7G372350 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49
Identity = 111/164 (67.68%), Postives = 119/164 (72.56%), Query Frame = 0


Query: 1   MLPSSSVLFLCFSFLYFTSSMAAPYAL-SDFTASKSIYD--------------------- 60
           M P  S+LFL FSFLYFTSSMA P++L S ++ S S YD                     
Sbjct: 1   MFPPFSILFLWFSFLYFTSSMADPHSLNSYYSRSNSFYDVLLSHGLPKGLLPKGITDYQI 60

Query: 61  -------------ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRV 120
                        ECNAMFENQLHYETNVSGTLSYG+IGALSGISA+DLFLWFPVKGIRV
Sbjct: 61  DADTGRFVVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRV 120

Query: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG 130
           DVPSSGVIYFDVGVVFKQFSQSLFETPP CVPNSK+QHRKIGNG
Sbjct: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPVCVPNSKSQHRKIGNG 164

[Close]

BLAST of Carg11493 vs. NCBI nr
Match: XP_008447224.1 (PREDICTED: uncharacterized protein At5g01610-like [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 5.1e-49
Identity = 110/164 (67.07%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MLPSSSVLFLCFSFLYFTSSMAAPYALSDF-TASKSIYD--------------------- 60
           M P SS+ FL FSFLYFTSS+A P++L+ F + S SIYD                     
Sbjct: 1   MFPPSSMPFLWFSFLYFTSSLADPHSLNYFYSPSNSIYDVLLAHGLPKGLLPKGVRDYEF 60

Query: 61  -------------ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRV 120
                        ECNAMFENQLHYETNVSGTLSYG+IGALSGISA+DLFLWFPVKGIRV
Sbjct: 61  DVDTGRFLVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRV 120

Query: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG 130
           DVPSSGVIYFDVGVVFKQFSQSLFETPP CVPN+K+QHRKIGNG
Sbjct: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPVCVPNTKSQHRKIGNG 164

[Close]

BLAST of Carg11493 vs. TAIR10
Match: AT3G07470.1 (Protein of unknown function, DUF538)

HSP 1 Score: 122.1 bits (305), Expect = 2.7e-28
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 31  TASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVP 90
           T   S+Y    C A +E ++HY+ N++GT+   QI  LSGISA++LFLWFPVKGIRVDVP
Sbjct: 58  TGRFSVYLNQACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVP 117

Query: 91  SSGVIYFDVGVVFKQFSQSLFETPPECVP 118
           SSG+IYFDVGVV KQ+S SLFETP +CVP
Sbjct: 118 SSGLIYFDVGVVRKQYSLSLFETPRDCVP 146

[Close]

BLAST of Carg11493 vs. TAIR10
Match: AT3G07460.2 (Protein of unknown function, DUF538)

HSP 1 Score: 112.5 bits (280), Expect = 2.2e-25
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 25  YALSDFTASKSIY--DECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKG 84
           + ++  T   S+Y    C A +E +LHY+  VSGT+ Y QI  LSGISA++LFLW  VKG
Sbjct: 51  FTVNGETGRFSVYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKG 110

Query: 85  IRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECV 117
           IRVDVPSSG+I+FDVGV+ KQ+S SLFETP +CV
Sbjct: 111 IRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCV 144

[Close]

BLAST of Carg11493 vs. TAIR10
Match: AT5G16380.1 (Protein of unknown function, DUF538)

HSP 1 Score: 105.1 bits (261), Expect = 3.4e-23
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 40  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGV 99
           C+A FENQ H++ N+SG LS G+IG LSG++ K+LFLWF VKGI VD  SSG+I+FDVGV
Sbjct: 69  CDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGV 128

Query: 100 VFKQFSQSLFETPPEC 116
             KQ S SLFE+P +C
Sbjct: 129 ADKQLSLSLFESPRDC 144

[Close]

BLAST of Carg11493 vs. TAIR10
Match: AT5G54530.1 (Protein of unknown function, DUF538)

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 40  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGV 99
           C A FE  +H+E  V G LSYG +  + G+S K+LFLW  VK I V+ P+SGVI FD+GV
Sbjct: 66  CYAKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGV 125

Query: 100 VFKQFSQSLFETPPECVPN 119
            FKQ S SLFE PP+C P+
Sbjct: 126 AFKQLSLSLFEDPPKCKPD 144

[Close]

BLAST of Carg11493 vs. TAIR10
Match: AT1G61667.1 (Protein of unknown function, DUF538)

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-20
Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 25  YALSDFTASKSI--YDECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKG 84
           Y+L D T    +   + C A FEN+++++  +   LSYG +  L G++ ++LFLW PVKG
Sbjct: 43  YSLDDKTGELEVQLQNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKG 102

Query: 85  IRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVP 118
           I V+ PSSG++ FD+GV  KQ S+SLFE PP C P
Sbjct: 103 IAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVCYP 137

[Close]

BLAST of Carg11493 vs. TrEMBL
Match: tr|A0A0A0K6Z0|A0A0A0K6Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372350 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.9e-50
Identity = 111/164 (67.68%), Postives = 119/164 (72.56%), Query Frame = 0


Query: 1   MLPSSSVLFLCFSFLYFTSSMAAPYAL-SDFTASKSIYD--------------------- 60
           M P  S+LFL FSFLYFTSSMA P++L S ++ S S YD                     
Sbjct: 1   MFPPFSILFLWFSFLYFTSSMADPHSLNSYYSRSNSFYDVLLSHGLPKGLLPKGITDYQI 60

Query: 61  -------------ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRV 120
                        ECNAMFENQLHYETNVSGTLSYG+IGALSGISA+DLFLWFPVKGIRV
Sbjct: 61  DADTGRFVVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRV 120

Query: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG 130
           DVPSSGVIYFDVGVVFKQFSQSLFETPP CVPNSK+QHRKIGNG
Sbjct: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPVCVPNSKSQHRKIGNG 164

[Close]

BLAST of Carg11493 vs. TrEMBL
Match: tr|A0A1S3BGD3|A0A1S3BGD3_CUCME (uncharacterized protein At5g01610-like OS=Cucumis melo OX=3656 GN=LOC103489718 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.4e-49
Identity = 110/164 (67.07%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MLPSSSVLFLCFSFLYFTSSMAAPYALSDF-TASKSIYD--------------------- 60
           M P SS+ FL FSFLYFTSS+A P++L+ F + S SIYD                     
Sbjct: 1   MFPPSSMPFLWFSFLYFTSSLADPHSLNYFYSPSNSIYDVLLAHGLPKGLLPKGVRDYEF 60

Query: 61  -------------ECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRV 120
                        ECNAMFENQLHYETNVSGTLSYG+IGALSGISA+DLFLWFPVKGIRV
Sbjct: 61  DVDTGRFLVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRV 120

Query: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNG 130
           DVPSSGVIYFDVGVVFKQFSQSLFETPP CVPN+K+QHRKIGNG
Sbjct: 121 DVPSSGVIYFDVGVVFKQFSQSLFETPPVCVPNTKSQHRKIGNG 164

[Close]

BLAST of Carg11493 vs. TrEMBL
Match: tr|A0A2I4HU85|A0A2I4HU85_9ROSI (uncharacterized protein LOC109021507 isoform X1 OS=Juglans regia OX=51240 GN=LOC109021507 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 69/94 (73.40%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 40  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGV 99
           CNA FE+QLHY+ NVSGTLSYGQIGALSGISA++LFLWFPVKGIRVD+PSSG+IYFDVGV
Sbjct: 69  CNAKFESQLHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYFDVGV 128

Query: 100 VFKQFSQSLFETPPECVPNSKTQHRKI--GNGFV 132
           V+KQFS SLFETPP+C+      H ++  G+GF+
Sbjct: 129 VYKQFSLSLFETPPDCMAKMTVDHAQLPDGSGFI 162

[Close]

BLAST of Carg11493 vs. TrEMBL
Match: tr|A0A2I4HU66|A0A2I4HU66_9ROSI (uncharacterized protein LOC109021507 isoform X2 OS=Juglans regia OX=51240 GN=LOC109021507 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 69/94 (73.40%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 40  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGV 99
           CNA FE+QLHY+ NVSGTLSYGQIGALSGISA++LFLWFPVKGIRVD+PSSG+IYFDVGV
Sbjct: 69  CNAKFESQLHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYFDVGV 128

Query: 100 VFKQFSQSLFETPPECVPNSKTQHRKI--GNGFV 132
           V+KQFS SLFETPP+C+      H ++  G+GF+
Sbjct: 129 VYKQFSLSLFETPPDCMAKMTVDHAQLPDGSGFI 162

[Close]

BLAST of Carg11493 vs. TrEMBL
Match: tr|A0A2P5CY89|A0A2P5CY89_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_269540 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.9e-32
Identity = 67/77 (87.01%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 40  CNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGV 99
           CNA FEN+LHY+ NVSGTLSYGQIGALSGISA++LFLWFPVKGIRVD+PSSG+IYFDVGV
Sbjct: 67  CNAKFENELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYFDVGV 126

Query: 100 VFKQFSQSLFETPPECV 117
           VFKQFS SLFETPP+CV
Sbjct: 127 VFKQFSLSLFETPPDCV 143

The following BLAST results are available for this feature:

BLAST of Carg11493 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954139.1	6.0e-66	79.77	uncharacterized protein At5g01610-like [Cucurbita moschata]	[more]
XP_022991665.1	6.7e-65	79.07	uncharacterized protein At5g01610-like [Cucurbita maxima]	[more]
XP_023549341.1	3.5e-58	73.03	uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo]	[more]
XP_004150364.1	1.3e-49	67.68	PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus] >KGN44689.1 ...	[more]
XP_008447224.1	5.1e-49	67.07	PREDICTED: uncharacterized protein At5g01610-like [Cucumis melo]	[more]

BLAST of Carg11493 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07470.1	2.7e-28	64.04	Protein of unknown function, DUF538	[more]
AT3G07460.2	2.2e-25	58.51	Protein of unknown function, DUF538	[more]
AT5G16380.1	3.4e-23	63.16	Protein of unknown function, DUF538	[more]
AT5G54530.1	1.2e-20	55.70	Protein of unknown function, DUF538	[more]
AT1G61667.1	2.7e-20	46.32	Protein of unknown function, DUF538	[more]

BLAST of Carg11493 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11493 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K6Z0\|A0A0A0K6Z0_CUCSA	8.9e-50	67.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372350 PE=4 SV=1	[more]
tr\|A0A1S3BGD3\|A0A1S3BGD3_CUCME	3.4e-49	67.07	uncharacterized protein At5g01610-like OS=Cucumis melo OX=3656 GN=LOC103489718 P...	[more]
tr\|A0A2I4HU85\|A0A2I4HU85_9ROSI	2.0e-33	73.40	uncharacterized protein LOC109021507 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4HU66\|A0A2I4HU66_9ROSI	2.0e-33	73.40	uncharacterized protein LOC109021507 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P5CY89\|A0A2P5CY89_9ROSA	2.9e-32	87.01	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_269540 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538
IPR036758	At5g01610-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11493-RA	Carg11493-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 22..120 e-value: 8.6E-14 score: 53.5
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 37..118
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 38..110 e-value: 3.5E-17 score: 62.8
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 38..126
None	No IPR available	PANTHER	PTHR31676:SF65	SUBFAMILY NOT NAMED	coord: 38..126

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11493	Cla014869	Watermelon (97103) v1	carwmB0014
Carg11493	Csa7G372350	Cucumber (Chinese Long) v2	carcuB0013
Carg11493	MELO3C012725	Melon (DHL92) v3.5.1	carmeB0014
Carg11493	ClCG09G008170	Watermelon (Charleston Gray)	carwcgB0012
Carg11493	CSPI07G15100	Wild cucumber (PI 183967)	carcpiB0013
Carg11493	Cucsa.388040	Cucumber (Gy14) v1	carcgyB0013
Carg11493	CmaCh08G002660	Cucurbita maxima (Rimu)	carcmaB0021
Carg11493	CmaCh17G013130	Cucurbita maxima (Rimu)	carcmaB0020
Carg11493	CmoCh08G002620	Cucurbita moschata (Rifu)	carcmoB0022
Carg11493	CmoCh17G012830	Cucurbita moschata (Rifu)	carcmoB0021
Carg11493	Lsi02G021660	Bottle gourd (USVL1VR-Ls)	carlsiB012
Carg11493	Cp4.1LG12g10550	Cucurbita pepo (Zucchini)	carcpeB0018
Carg11493	Cp4.1LG13g07070	Cucurbita pepo (Zucchini)	carcpeB0019
Carg11493	CsGy7G013590	Cucumber (Gy14) v2	carcgybB0012
Carg11493	MELO3C012725.2	Melon (DHL92) v3.6.1	carmedB0015
Carg11493	CsaV3_7G026870	Cucumber (Chinese Long) v3	carcucB0013
Carg11493	Cla97C09G170840	Watermelon (97103) v2	carwmbB0012
Carg11493	Bhi09G001017	Wax gourd	carwgoB0015

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11493	Carg05088	Silver-seed gourd	carcarB009

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11493	Melon (DHL92) v3.5.1	carmeB0013
Carg11493	Melon (DHL92) v3.6.1	carmedB0014