Carg05088 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05088
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function, DUF538
Location	Cucurbita_argyrosperma_scaffold_060 : 1310105 .. 1311983 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCTCCATTGTTAATCTACTGCAGCTTTCTCCGAATTTTTCCACTACGCGTCTTAGATTTTTCCTTTTCCTGCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTGGTCATCACCTCTGATTCGAAGTCCATTTACGATGTTCTTTCAGCTCATGGCCTCCCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCTGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGGTCTTGATCTACTTCTTCATTTTCTCCTTTCTCTCTTTCATTACTGTATCATATATTGTATGGTTGTTTGGTTTCAATTCGATTCAATTTATTAGAGCTTTGGAATTTGATTCATATGCAGAATCAACACAGGAAAATTGGGAACCGATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGAAATTGCCATTGAAACAAAAGGAAAAAAAGGCTCAAAGGAGGGAGGAATCCTGCTATTCATTGTATATGTCATCAAAGCATATATATTATGGTTCTTTACACATATCATTCAGAGCAGAGTCAGAGTCTGAGAATTTCTGGTTTGTGTGAGGAATTGGAAAGGAAGGAAGAAGGGGAAGAAGAAGCACATTTGGTTCGTAGAAATTTTTGTTTGGGGGGAGATTGCAGCAAGGTAGGTGGAGTTCAGGTGAAAAATTTACACATTTCTATTCAATAATCTTCAGAAATTTTGGTGTATTGTTGTGAATATTATCATTATCTTTATCATTATTGTTATTATTACAGTGGCTGTAATGATTTTGTTTCTTTTTTTTGTCTGGAATGCAAATTCTCTGCAATAAACATGTCAAGAATAGAGTGTTTTCTTGGTTTTATACCGATTTCTTGTTTGCCAATGAGTTCTATAATCGCATATCAGTGTTGCAATGGGAATTGTCATTCTTGTCAGCATTAGTAAAACATTTTCTATGATAGATGTCTGAAACTTGATATAAGCAGTAGTTTTTGTGCTCATTTTCTAGCTTTTACTTCCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGCATGCAAAGTGATACTCAATGGCTTGCTTGACTATGAAAATGGGTAACAAAGTGATATACTCAATCGCTTGTTTGACTATGAAAATGGGTAACTTAGTGATACTCTGATGGCTTGCTTGGCTATGAAAATGGTATTTTACCGTAGTGTTTGAATGCTGTTGAGCCTTTTTCTTTGGTGATAGACCTACCCTGATAGAGGACTAGATCAATTAGAGCGGTTGTAATAGCCTAAATCCACTTTCAGTAGATACTATCATATTTGGAGTTTCCCTCTCGGACTTTCTTTCAAGATTTTTAAAACGTGTCTAGGGAGAGATTTCCACAATCTTATGAAAAATGCTTCATTTCCCTTTTCAACTGACGTGGGATCTCACAATCCTCCCACTTCAGGGTTCGGTGTCTTCACTGGCCCTCGTTCCCCTCTAAACCACATGTTT

mRNA sequence

GTATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCTCCATTGTTAATCTACTGCAGCTTTCTCCGAATTTTTCCACTACGCGTCTTAGATTTTTCCTTTTCCTGCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTGGTCATCACCTCTGATTCGAAGTCCATTTACGATGTTCTTTCAGCTCATGGCCTCCCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCTGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCGATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGAAATTGCCATTGAAACAAAAGGAAAAAAAGGCTCAAAGGAGGGAGGAATCCTGCTATTCATTGTATATGTCATCAAAGCATATATATTATGGTTCTTTACACATATCATTCAGAGCAGAGTCAGAGTCTGAGAATTTCTGGTTTGTGTGAGGAATTGGAAAGGAAGGAAGAAGGGGAAGAAGAAGCACATTTGGTTCGTAGAAATTTTTGTTTGGGGGGAGATTGCAGCAAGGTAGGTGGAGTTCAGGTGAAAAATTTACACATTTCTATTCAATAATCTTCAGAAATTTTGGTGTATTGTTGTGAATATTATCATTATCTTTATCATTATTGTTATTATTACAGTGGCTGTAATGATTTTGTTTCTTTTTTTTGTCTGGAATGCAAATTCTCTGCAATAAACATGTCAAGAATAGAGTGTTTTCTTGGTTTTATACCGATTTCTTGTTTGCCAATGAGTTCTATAATCGCATATCAGTGTTGCAATGGGAATTGTCATTCTTGTCAGCATTAGTAAAACATTTTCTATGATAGATGTCTGAAACTTGATATAAGCAGTAGTTTTTGTGCTCATTTTCTAGCTTTTACTTCCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGCATGCAAAGTGATACTCAATGGCTTGCTTGACTATGAAAATGGGTAACAAAGTGATATACTCAATCGCTTGTTTGACTATGAAAATGGGTAACTTAGTGATACTCTGATGGCTTGCTTGGCTATGAAAATGGTATTTTACCGTAGTGTTTGAATGCTGTTGAGCCTTTTTCTTTGGTGATAGACCTACCCTGATAGAGGACTAGATCAATTAGAGCGGTTGTAATAGCCTAAATCCACTTTCAGTAGATACTATCATATTTGGAGTTTCCCTCTCGGACTTTCTTTCAAGATTTTTAAAACGTGTCTAGGGAGAGATTTCCACAATCTTATGAAAAATGCTTCATTTCCCTTTTCAACTGACGTGGGATCTCACAATCCTCCCACTTCAGGGTTCGGTGTCTTCACTGGCCCTCGTTCCCCTCTAAACCACATGTTT

Coding sequence (CDS)

ATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTGGTCATCACCTCTGATTCGAAGTCCATTTACGATGTTCTTTCAGCTCATGGCCTCCCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCTGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCGATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

Protein sequence

MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA

Homology

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BLAST of Carg05088 vs. NCBI nr
Match: XP_022959707.1 (uncharacterized protein At5g01610-like [Cucurbita moschata])

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 167

[Close]

BLAST of Carg05088 vs. NCBI nr
Match: XP_023004236.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])

HSP 1 Score: 334.0 bits (855), Expect = 3.0e-88
Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLYFTPSMAAEPRVV+TSD KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGN+FVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVKVA 167

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BLAST of Carg05088 vs. NCBI nr
Match: XP_023550146.1 (uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 3.9e-88
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFLLFFFLY TPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF
Sbjct: 1   MLFLLFFFLYCTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV
Sbjct: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGN+FVESGSVKVA
Sbjct: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVKVA 167

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BLAST of Carg05088 vs. NCBI nr
Match: XP_022991665.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-70
Identity = 135/167 (80.84%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           MLFL F FLYFT SMAA   +   + SKSIYDVL AHGLPKGLLPKG+RDY+F +++GRF
Sbjct: 7   MLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFDQDTGRF 66

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           +VFLD+ECNAMFENQLHYETNV+GTLSYGQIGALSGISA+DLFLWFPVKGIRVD+PSSGV
Sbjct: 67  LVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGV 126

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKVA 168
           IYFDVGVVFKQFSQSLFETPPECV  SK QHRKIGN FV+   VKVA
Sbjct: 127 IYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVA 173

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BLAST of Carg05088 vs. NCBI nr
Match: XP_022954139.1 (uncharacterized protein At5g01610-like [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 133/166 (80.12%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           +LFL F FLYFT SMAA   +   + SKSIYDVL AHGLPKGLLPKG+RDY+F +++GRF
Sbjct: 7   VLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFDQDTGRF 66

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
           +VFLD+ECNAMFENQLHYETNV+GTLSYGQIGALSGISA+DLFLWFPVKGIRVD+PSSGV
Sbjct: 67  LVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGV 126

Query: 121 IYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNRFVESGSVKV 167
           IYFDVGVVFKQFSQSLFETPPECV  SK QHRKIGN FV+   VKV
Sbjct: 127 IYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKV 172

[Close]

BLAST of Carg05088 vs. TAIR10
Match: AT3G07470.1 (Protein of unknown function, DUF538)

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-43
Identity = 74/120 (61.67%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 25  SDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTG 84
           S++++IY++L A+GLP G+ PKG+R++ F  E+GRF V+L++ C A +E ++HY+ N+TG
Sbjct: 26  SETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITG 85

Query: 85  TLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECV 144
           T+   QI  LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV KQ+S SLFETP +CV
Sbjct: 86  TIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCV 145

[Close]

BLAST of Carg05088 vs. TAIR10
Match: AT3G07460.2 (Protein of unknown function, DUF538)

HSP 1 Score: 155.6 bits (392), Expect = 2.7e-38
Identity = 69/123 (56.10%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 23  ITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNV 82
           + ++++SI ++L A+GLP GL PKG++ +  + E+GRF V+L++ C A +E +LHY+  V
Sbjct: 23  VIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIV 82

Query: 83  TGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPE 142
           +GT+ Y QI  LSGISAQ+LFLW  VKGIRVD+PSSG+I+FDVGV+ KQ+S SLFETP +
Sbjct: 83  SGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRD 142

Query: 143 CVS 146
           CV+
Sbjct: 143 CVA 145

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BLAST of Carg05088 vs. TAIR10
Match: AT5G16380.1 (Protein of unknown function, DUF538)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 5   LFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFL 64
           LFF +    S    P++    D  S YD L    LP G++PKG+ ++    ++GRF V L
Sbjct: 7   LFFLIIVLFSSILFPQLSSLPD-PSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVAL 66

Query: 65  DRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFD 124
              C+A FENQ H++ N++G LS G+IG LSG++ ++LFLWF VKGI VD  SSG+I+FD
Sbjct: 67  PVPCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFD 126

Query: 125 VGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           VGV  KQ S SLFE+P +C +A+++Q R +
Sbjct: 127 VGVADKQLSLSLFESPRDC-TAAESQPRAV 154

[Close]

BLAST of Carg05088 vs. TAIR10
Match: AT5G54530.1 (Protein of unknown function, DUF538)

HSP 1 Score: 124.8 bits (312), Expect = 5.0e-29
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 0


Query: 29  SIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSY 88
           +++DVL + GLP GLLP+ +  Y  H + GR  VFL   C A FE  +H+E  V G LSY
Sbjct: 28  TVHDVLRSEGLPAGLLPQEVDSYILHND-GRLEVFLAAPCYAKFETNVHFEAVVRGNLSY 87

Query: 89  GQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPEC 144
           G +  + G+S ++LFLW  VK I V+ P+SGVI FD+GV FKQ S SLFE PP+C
Sbjct: 88  GSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKC 141

[Close]

BLAST of Carg05088 vs. TAIR10
Match: AT1G61667.1 (Protein of unknown function, DUF538)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-27
Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           +L LL    + TP           S   SI ++L A GLP GL P  +  Y   +++G  
Sbjct: 4   LLLLLLLVPFITP-----------SSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGEL 63

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
            V L   C A FEN+++++  +   LSYG +  L G++ ++LFLW PVKGI V+ PSSG+
Sbjct: 64  EVQLQNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGL 123

Query: 121 IYFDVGVVFKQFSQSLFETPPEC 144
           + FD+GV  KQ S+SLFE PP C
Sbjct: 124 VLFDIGVAHKQISRSLFEDPPVC 135

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BLAST of Carg05088 vs. TrEMBL
Match: tr|A0A1S3BGD3|A0A1S3BGD3_CUCME (uncharacterized protein At5g01610-like OS=Cucumis melo OX=3656 GN=LOC103489718 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.4e-64
Identity = 127/158 (80.38%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVV--ITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           M FL F FLYFT S+ A+P  +    S S SIYDVL AHGLPKGLLPKG+RDYEF  ++G
Sbjct: 7   MPFLWFSFLYFTSSL-ADPHSLNYFYSPSNSIYDVLLAHGLPKGLLPKGVRDYEFDVDTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RF+VFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFLVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGN 157
           GVIYFDVGVVFKQFSQSLFETPP CV  +K+QHRKIGN
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNTKSQHRKIGN 163

[Close]

BLAST of Carg05088 vs. TrEMBL
Match: tr|A0A0A0K6Z0|A0A0A0K6Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372350 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.8e-63
Identity = 126/158 (79.75%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVIT--SDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           +LFL F FLYFT SM A+P  + +  S S S YDVL +HGLPKGLLPKGI DY+   ++G
Sbjct: 7   ILFLWFSFLYFTSSM-ADPHSLNSYYSRSNSFYDVLLSHGLPKGLLPKGITDYQIDADTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RFVVFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFVVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGN 157
           GVIYFDVGVVFKQFSQSLFETPP CV  SK+QHRKIGN
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNSKSQHRKIGN 163

[Close]

BLAST of Carg05088 vs. TrEMBL
Match: tr|A0A2P6PTU1|A0A2P6PTU1_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0282751 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.5e-48
Identity = 95/137 (69.34%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 19  PRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHY 78
           P + I+SDS S+YDVL AHGLP GLLPKG+  +E  +E GRF V+LD+ CNA FE++LHY
Sbjct: 21  PIMTISSDS-SVYDVLLAHGLPMGLLPKGVTQFEI-DEGGRFQVYLDQACNAKFESELHY 80

Query: 79  ETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFE 138
           + NV+GTLSYG+IGALSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVVFKQFS SLFE
Sbjct: 81  DRNVSGTLSYGRIGALSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVFKQFSLSLFE 140

Query: 139 TPPECVSASKNQHRKIG 156
           TPP+C +A+      +G
Sbjct: 141 TPPDCTAATPAAQADVG 155

[Close]

BLAST of Carg05088 vs. TrEMBL
Match: tr|A0A2P5DPB3|A0A2P5DPB3_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_044700 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.7e-48
Identity = 91/118 (77.12%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 28  KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLS 87
           ++IY+VL AHGLP GLLPKG+++++  +ESGRF V+LD+ CNA FEN+LHY+ NV+GTLS
Sbjct: 14  ETIYEVLKAHGLPMGLLPKGVKEFDI-DESGRFQVYLDQACNAKFENELHYDRNVSGTLS 73

Query: 88  YGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVS 146
           YGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+IYFDVGVVFKQFS SLFETPP+CV+
Sbjct: 74  YGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYFDVGVVFKQFSLSLFETPPDCVA 130

[Close]

BLAST of Carg05088 vs. TrEMBL
Match: tr|A0A2P5CY89|A0A2P5CY89_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_269540 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.0e-47
Identity = 98/145 (67.59%), Postives = 118/145 (81.38%), Query Frame = 0


Query: 1   MLFLLFFFLYFTPSMAAEPRVVITSDSKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           +L LL+F L     MA           ++IY+VL AHGLP GLLPKG+++++  +ESGRF
Sbjct: 3   LLPLLWFLL--LSLMACTDSRPEKKQEETIYEVLKAHGLPMGLLPKGVKEFDI-DESGRF 62

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
            V+LD+ CNA FEN+LHY+ NV+GTLSYGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+
Sbjct: 63  QVYLDQACNAKFENELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGL 122

Query: 121 IYFDVGVVFKQFSQSLFETPPECVS 146
           IYFDVGVVFKQFS SLFETPP+CV+
Sbjct: 123 IYFDVGVVFKQFSLSLFETPPDCVA 144

The following BLAST results are available for this feature:

BLAST of Carg05088 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959707.1	1.6e-89	100.00	uncharacterized protein At5g01610-like [Cucurbita moschata]	[more]
XP_023004236.1	3.0e-88	98.20	uncharacterized protein At5g01610-like [Cucurbita maxima]	[more]
XP_023550146.1	3.9e-88	98.80	uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991665.1	3.7e-70	80.84	uncharacterized protein At5g01610-like [Cucurbita maxima]	[more]
XP_022954139.1	3.1e-69	80.12	uncharacterized protein At5g01610-like [Cucurbita moschata]	[more]

BLAST of Carg05088 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07470.1	3.6e-43	61.67	Protein of unknown function, DUF538	[more]
AT3G07460.2	2.7e-38	56.10	Protein of unknown function, DUF538	[more]
AT5G16380.1	2.2e-32	46.67	Protein of unknown function, DUF538	[more]
AT5G54530.1	5.0e-29	51.30	Protein of unknown function, DUF538	[more]
AT1G61667.1	3.6e-27	41.26	Protein of unknown function, DUF538	[more]

BLAST of Carg05088 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05088 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGD3\|A0A1S3BGD3_CUCME	3.4e-64	80.38	uncharacterized protein At5g01610-like OS=Cucumis melo OX=3656 GN=LOC103489718 P...	[more]
tr\|A0A0A0K6Z0\|A0A0A0K6Z0_CUCSA	3.8e-63	79.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372350 PE=4 SV=1	[more]
tr\|A0A2P6PTU1\|A0A2P6PTU1_ROSCH	1.5e-48	69.34	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0282751 PE=4...	[more]
tr\|A0A2P5DPB3\|A0A2P5DPB3_PARAD	7.7e-48	77.12	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_044700 PE...	[more]
tr\|A0A2P5CY89\|A0A2P5CY89_9ROSA	5.0e-47	67.59	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_269540 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036758	At5g01610-like
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05088-RA	Carg05088-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 30..138 e-value: 7.3E-32 score: 110.0
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 6..153
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 20..148 e-value: 1.1E-30 score: 108.2
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 4..145
None	No IPR available	PANTHER	PTHR31676:SF65	SUBFAMILY NOT NAMED	coord: 6..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05088	Cla014869	Watermelon (97103) v1	carwmB0079
Carg05088	Csa7G372350	Cucumber (Chinese Long) v2	carcuB0095
Carg05088	MELO3C012725	Melon (DHL92) v3.5.1	carmeB0087
Carg05088	ClCG09G008170	Watermelon (Charleston Gray)	carwcgB0080
Carg05088	CSPI07G15100	Wild cucumber (PI 183967)	carcpiB0099
Carg05088	Cucsa.388040	Cucumber (Gy14) v1	carcgyB0104
Carg05088	CmaCh08G002660	Cucurbita maxima (Rimu)	carcmaB0112
Carg05088	CmaCh17G013130	Cucurbita maxima (Rimu)	carcmaB0104
Carg05088	CmoCh08G002620	Cucurbita moschata (Rifu)	carcmoB0119
Carg05088	CmoCh17G012830	Cucurbita moschata (Rifu)	carcmoB0112
Carg05088	Lsi02G021660	Bottle gourd (USVL1VR-Ls)	carlsiB074
Carg05088	Cp4.1LG12g10550	Cucurbita pepo (Zucchini)	carcpeB0116
Carg05088	Cp4.1LG13g07070	Cucurbita pepo (Zucchini)	carcpeB0123
Carg05088	CsGy7G013590	Cucumber (Gy14) v2	carcgybB0095
Carg05088	MELO3C012725.2	Melon (DHL92) v3.6.1	carmedB0088
Carg05088	CsaV3_7G026870	Cucumber (Chinese Long) v3	carcucB0102
Carg05088	Cla97C09G170840	Watermelon (97103) v2	carwmbB0085
Carg05088	Bhi09G001017	Wax gourd	carwgoB0098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05088	Carg11493	Silver-seed gourd	carcarB009

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05088	Melon (DHL92) v3.5.1	carmeB0085
Carg05088	Melon (DHL92) v3.6.1	carmedB0086