CmaCh08G002660.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G002660.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_11
Location	Cma_Chr08 : 1522867 .. 1523731 (-)
Sequence length	734

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATATATATATATATATATATATATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCCCCATTGCTAATCTACTTCAAATTTCTCTCAATTTCTCCACTATTCATCTTCGATTTCTCCTTTTTCCTCCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTAGTCGTCACCTCTGATTTGAAGTCCATTTACGATGTTCTTTCAGCTCACGGTCTACCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCCGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGGTCTTGATCTAGTTCTTCATTTTCTCCTTTCTCTCTTTCATTACTGTATCATATATTGTATGGTTGTTTGGTTTCAATTTGATTCAATTTTTTAGAGCTTTGGAATTTGATTCAATTTGATTCATATGCAGAATCAACACAGGAAAATTGGGAACCAATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

mRNA sequence

AGATATATATATATATATATATATATATATATTCATAATTGAAGAATTGTTGTAATGACGACCCCACCCTTCTCTCTCACTCTTCGCCAATAATTGAAATCCACCATTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTGCTCTCACTTTCAATCCCCATTGCTAATCTACTTCAAATTTCTCTCAATTTCTCCACTATTCATCTTCGATTTCTCCTTTTTCCTCCATCGCCATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTAGTCGTCACCTCTGATTTGAAGTCCATTTACGATGTTCTTTCAGCTCACGGTCTACCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCCGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCAATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

Coding sequence (CDS)

ATGCTCTTCCTCTTGTTCTTTTTCCTCTACTTCACCCCTTCAATGGCGGCGGAGCCTCGTGTAGTCGTCACCTCTGATTTGAAGTCCATTTACGATGTTCTTTCAGCTCACGGTCTACCCAAGGGTCTACTTCCCAAAGGTATTAGGGATTACGAATTCCATGAGGAGAGTGGGCGGTTCGTGGTGTTCTTGGATCGGGAGTGTAATGCGATGTTCGAGAATCAGCTGCATTACGAGACCAATGTTACGGGCACTTTGAGTTATGGTCAGATCGGTGCCTTGTCGGGGATTTCGGCTCAGGATCTCTTCTTGTGGTTTCCTGTTAAGGGCATTCGCGTCGACATTCCGAGCTCCGGTGTTATTTATTTTGACGTTGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCTCCCGAATGCGTTTCGGCTTCCAAGAATCAACACAGGAAAATTGGGAACCAATTTGTTGAGTCAGGTTCAGTGAAAGTGGCTTGA

Protein sequence

MLFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVKVA

Homology

[Close]

BLAST of CmaCh08G002660.1 vs. TrEMBL
Match: A0A0A0K6Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372350 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.5e-63
Identity = 128/164 (78.05%), Postives = 141/164 (85.98%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVVVT--SDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           +LFL F FLYFT SMA +P  + +  S   S YDVL +HGLPKGLLPKGI DY+   ++G
Sbjct: 7   ILFLWFSFLYFTSSMA-DPHSLNSYYSRSNSFYDVLLSHGLPKGLLPKGITDYQIDADTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RFVVFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFVVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKI--GNQFVE 161
           GVIYFDVGVVFKQFSQSLFETPP CV  SK+QHRKI  GNQFV+
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNSKSQHRKIGNGNQFVK 169

[Close]

BLAST of CmaCh08G002660.1 vs. TrEMBL
Match: A0A067LDG7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15108 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 95/151 (62.91%), Postives = 115/151 (76.16%), Query Frame = 1


Query: 4   LLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVF 63
           +L FF   +  + + P V+   + +S+YDVL  HGLP GLLPKG++D+   E++G F V 
Sbjct: 1   MLPFFPLISLILLSIPSVIPLDNKQSVYDVLKEHGLPMGLLPKGVKDFRI-EDTGHFEVH 60

Query: 64  LDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYF 123
           LD  CNA FEN+LHY+ NV+GTLSYGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+IYF
Sbjct: 61  LDEACNAKFENELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYF 120

Query: 124 DVGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           DVGVV KQFS SLFETP EC +  + Q   I
Sbjct: 121 DVGVVSKQFSLSLFETPRECTAVREGQPEAI 150

[Close]

BLAST of CmaCh08G002660.1 vs. TrEMBL
Match: M5VP51_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011328mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 1


Query: 28  KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLS 87
           +S+YDVL AHGLP GLLPKG+ D+E  +E GRF V LD+ CNA FE+QLHY+ NV+GTLS
Sbjct: 66  RSVYDVLRAHGLPMGLLPKGVVDFEVDDE-GRFQVHLDQACNAKFESQLHYDRNVSGTLS 125

Query: 88  YGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSAS 147
           +GQIG+LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV+KQFS SLFETPP C +A+
Sbjct: 126 FGQIGSLSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVYKQFSLSLFETPPVCTAAT 185

Query: 148 KNQHRKIGNQFV-ESGSVK 166
            +    IG  F  ESG ++
Sbjct: 186 TSV-EAIGTVFEGESGKLR 202

[Close]

BLAST of CmaCh08G002660.1 vs. TrEMBL
Match: W9RDZ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015854 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-46
Identity = 96/162 (59.26%), Postives = 118/162 (72.84%), Query Frame = 1


Query: 4   LLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVF 63
           L F  L       + P+  V +   ++YD L  HGLP GLLPKG++D+E  +E+G F V 
Sbjct: 7   LCFVILSMATRSDSRPQKKVAATT-TVYDALKQHGLPMGLLPKGVKDFEI-DENGNFQVH 66

Query: 64  LDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYF 123
           LD+ CNA FE++LHY+ NV+GTLSYGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+IYF
Sbjct: 67  LDKACNAKFESELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYF 126

Query: 124 DVGVVFKQFSQSLFETPPECVSASKNQHRKIGNQFVESGSVK 166
           DVGVVFKQFS SLFE+PPECV+          +   ESG ++
Sbjct: 127 DVGVVFKQFSLSLFESPPECVAVRTLDRNDFSDSKRESGKLR 166

[Close]

BLAST of CmaCh08G002660.1 vs. TrEMBL
Match: A0A061DMW7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_002665 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-45
Identity = 92/144 (63.89%), Postives = 115/144 (79.86%), Query Frame = 1


Query: 2   LFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFV 61
           +FL F F++           +V  +  SIY++L AHGLP GLLPKGI  ++F++ +GRF 
Sbjct: 8   VFLYFIFIF----------TIVNGEQDSIYEILKAHGLPMGLLPKGITRFDFND-TGRFE 67

Query: 62  VFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVI 121
           V LD+ CNA FE++LHY+ NV+GTLSYGQIGALSGI+AQ+LFLWFPVKGIRVDIPSSG+I
Sbjct: 68  VHLDQACNAKFESELHYDRNVSGTLSYGQIGALSGITAQELFLWFPVKGIRVDIPSSGLI 127

Query: 122 YFDVGVVFKQFSQSLFETPPECVS 146
           YFDVGVVFKQFS SLFETP +C++
Sbjct: 128 YFDVGVVFKQFSLSLFETPRDCMA 140

[Close]

BLAST of CmaCh08G002660.1 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538)

HSP 1 Score: 171.0 bits (432), Expect = 6.1e-43
Identity = 74/120 (61.67%), Postives = 99/120 (82.50%), Query Frame = 1


Query: 25  SDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTG 84
           S+ ++IY++L A+GLP G+ PKG+R++ F  E+GRF V+L++ C A +E ++HY+ N+TG
Sbjct: 26  SETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITG 85

Query: 85  TLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECV 144
           T+   QI  LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV KQ+S SLFETP +CV
Sbjct: 86  TIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCV 145

[Close]

BLAST of CmaCh08G002660.1 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 154.8 bits (390), Expect = 4.5e-38
Identity = 74/136 (54.41%), Postives = 102/136 (75.00%), Query Frame = 1


Query: 23  VTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNV 82
           V ++ +SI ++L A+GLP GL PKG++ +  + E+GRF V+L++ C A +E +LHY+  V
Sbjct: 23  VIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIV 82

Query: 83  TGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPE 142
           +GT+ Y QI  LSGISAQ+LFLW  VKGIRVD+PSSG+I+FDVGV+ KQ+S SLFETP +
Sbjct: 83  SGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRD 142

Query: 143 CVSASKNQHRKIGNQF 159
           CV A +     IG+ F
Sbjct: 143 CV-AVRGDAEFIGSVF 157

[Close]

BLAST of CmaCh08G002660.1 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 1


Query: 5   LFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFL 64
           LFF +    S    P++    D  S YD L    LP G++PKG+ ++    ++GRF V L
Sbjct: 7   LFFLIIVLFSSILFPQLSSLPD-PSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVAL 66

Query: 65  DRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFD 124
              C+A FENQ H++ N++G LS G+IG LSG++ ++LFLWF VKGI VD  SSG+I+FD
Sbjct: 67  PVPCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFD 126

Query: 125 VGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           VGV  KQ S SLFE+P +C +A+++Q R +
Sbjct: 127 VGVADKQLSLSLFESPRDC-TAAESQPRAV 154

[Close]

BLAST of CmaCh08G002660.1 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 124.8 bits (312), Expect = 5.0e-29
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 1


Query: 29  SIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLSY 88
           +++DVL + GLP GLLP+ +  Y  H + GR  VFL   C A FE  +H+E  V G LSY
Sbjct: 28  TVHDVLRSEGLPAGLLPQEVDSYILHND-GRLEVFLAAPCYAKFETNVHFEAVVRGNLSY 87

Query: 89  GQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPEC 144
           G +  + G+S ++LFLW  VK I V+ P+SGVI FD+GV FKQ S SLFE PP+C
Sbjct: 88  GSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKC 141

[Close]

BLAST of CmaCh08G002660.1 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538)

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-27
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRF 60
           +L LL    + TPS  +           SI ++L A GLP GL P  +  Y   +++G  
Sbjct: 4   LLLLLLLVPFITPSSQS-----------SIRNLLEARGLPGGLFPDNVESYSLDDKTGEL 63

Query: 61  VVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGV 120
            V L   C A FEN+++++  +   LSYG +  L G++ ++LFLW PVKGI V+ PSSG+
Sbjct: 64  EVQLQNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGL 123

Query: 121 IYFDVGVVFKQFSQSLFETPPEC 144
           + FD+GV  KQ S+SLFE PP C
Sbjct: 124 VLFDIGVAHKQISRSLFEDPPVC 135

[Close]

BLAST of CmaCh08G002660.1 vs. NCBI nr
Match: gi|659092797|ref|XP_008447224.1| (PREDICTED: uncharacterized protein LOC103489718 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-64
Identity = 129/164 (78.66%), Postives = 142/164 (86.59%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVV--VTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           M FL F FLYFT S+A +P  +    S   SIYDVL AHGLPKGLLPKG+RDYEF  ++G
Sbjct: 7   MPFLWFSFLYFTSSLA-DPHSLNYFYSPSNSIYDVLLAHGLPKGLLPKGVRDYEFDVDTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RF+VFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFLVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKI--GNQFVE 161
           GVIYFDVGVVFKQFSQSLFETPP CV  +K+QHRKI  GNQFV+
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNTKSQHRKIGNGNQFVK 169

[Close]

BLAST of CmaCh08G002660.1 vs. NCBI nr
Match: gi|449465296|ref|XP_004150364.1| (PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 5.0e-63
Identity = 128/164 (78.05%), Postives = 141/164 (85.98%), Query Frame = 1


Query: 1   MLFLLFFFLYFTPSMAAEPRVVVT--SDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESG 60
           +LFL F FLYFT SMA +P  + +  S   S YDVL +HGLPKGLLPKGI DY+   ++G
Sbjct: 7   ILFLWFSFLYFTSSMA-DPHSLNSYYSRSNSFYDVLLSHGLPKGLLPKGITDYQIDADTG 66

Query: 61  RFVVFLDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSS 120
           RFVVFLDRECNAMFENQLHYETNV+GTLSYG+IGALSGISAQDLFLWFPVKGIRVD+PSS
Sbjct: 67  RFVVFLDRECNAMFENQLHYETNVSGTLSYGKIGALSGISAQDLFLWFPVKGIRVDVPSS 126

Query: 121 GVIYFDVGVVFKQFSQSLFETPPECVSASKNQHRKI--GNQFVE 161
           GVIYFDVGVVFKQFSQSLFETPP CV  SK+QHRKI  GNQFV+
Sbjct: 127 GVIYFDVGVVFKQFSQSLFETPPVCVPNSKSQHRKIGNGNQFVK 169

[Close]

BLAST of CmaCh08G002660.1 vs. NCBI nr
Match: gi|764528643|ref|XP_011458136.1| (PREDICTED: uncharacterized protein LOC101296442 [Fragaria vesca subsp. vesca])

HSP 1 Score: 196.1 bits (497), Expect = 5.0e-47
Identity = 92/132 (69.70%), Postives = 112/132 (84.85%), Query Frame = 1


Query: 19  PRVVVTSDLK---SIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQ 78
           P + +TSD K   S+Y+VL AHGLP GLLPKG+  +E  +E GRF V LD+ CNA FE++
Sbjct: 21  PIMTITSDSKPPPSVYEVLRAHGLPMGLLPKGVTKFEI-DEGGRFQVHLDQACNAKFESE 80

Query: 79  LHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQS 138
           LHY+ NV+GTLSYG+IGALSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV+KQFS S
Sbjct: 81  LHYDRNVSGTLSYGRIGALSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVYKQFSLS 140

Query: 139 LFETPPECVSAS 148
           LFETPP+C +A+
Sbjct: 141 LFETPPDCTAAT 151

[Close]

BLAST of CmaCh08G002660.1 vs. NCBI nr
Match: gi|802546433|ref|XP_012084857.1| (PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas])

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-46
Identity = 95/151 (62.91%), Postives = 115/151 (76.16%), Query Frame = 1


Query: 4   LLFFFLYFTPSMAAEPRVVVTSDLKSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVF 63
           +L FF   +  + + P V+   + +S+YDVL  HGLP GLLPKG++D+   E++G F V 
Sbjct: 1   MLPFFPLISLILLSIPSVIPLDNKQSVYDVLKEHGLPMGLLPKGVKDFRI-EDTGHFEVH 60

Query: 64  LDRECNAMFENQLHYETNVTGTLSYGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYF 123
           LD  CNA FEN+LHY+ NV+GTLSYGQIGALSGISAQ+LFLWFPVKGIRVDIPSSG+IYF
Sbjct: 61  LDEACNAKFENELHYDRNVSGTLSYGQIGALSGISAQELFLWFPVKGIRVDIPSSGLIYF 120

Query: 124 DVGVVFKQFSQSLFETPPECVSASKNQHRKI 155
           DVGVV KQFS SLFETP EC +  + Q   I
Sbjct: 121 DVGVVSKQFSLSLFETPRECTAVREGQPEAI 150

[Close]

BLAST of CmaCh08G002660.1 vs. NCBI nr
Match: gi|595801468|ref|XP_007201828.1| (hypothetical protein PRUPE_ppa011328mg [Prunus persica])

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-46
Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 1


Query: 28  KSIYDVLSAHGLPKGLLPKGIRDYEFHEESGRFVVFLDRECNAMFENQLHYETNVTGTLS 87
           +S+YDVL AHGLP GLLPKG+ D+E  +E GRF V LD+ CNA FE+QLHY+ NV+GTLS
Sbjct: 66  RSVYDVLRAHGLPMGLLPKGVVDFEVDDE-GRFQVHLDQACNAKFESQLHYDRNVSGTLS 125

Query: 88  YGQIGALSGISAQDLFLWFPVKGIRVDIPSSGVIYFDVGVVFKQFSQSLFETPPECVSAS 147
           +GQIG+LSGISAQ+LFLWFPVKGIRVD+PSSG+IYFDVGVV+KQFS SLFETPP C +A+
Sbjct: 126 FGQIGSLSGISAQELFLWFPVKGIRVDVPSSGIIYFDVGVVYKQFSLSLFETPPVCTAAT 185

Query: 148 KNQHRKIGNQFV-ESGSVK 166
            +    IG  F  ESG ++
Sbjct: 186 TSV-EAIGTVFEGESGKLR 202

The following BLAST results are available for this feature:

BLAST of CmaCh08G002660.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh08G002660.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6Z0_CUCSA	3.5e-63	78.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372350 PE=4 SV=1	[more]
A0A067LDG7_JATCU	1.7e-46	62.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15108 PE=4 SV=1	[more]
M5VP51_PRUPE	1.7e-46	68.35	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011328mg PE=4 SV=1	[more]
W9RDZ7_9ROSA	3.0e-46	59.26	Uncharacterized protein OS=Morus notabilis GN=L484_015854 PE=4 SV=1	[more]
A0A061DMW7_THECC	7.3e-45	63.89	Uncharacterized protein OS=Theobroma cacao GN=TCM_002665 PE=4 SV=1	[more]

BLAST of CmaCh08G002660.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07470.1	6.1e-43	61.67	Protein of unknown function, DUF538	[more]
AT3G07460.2	4.5e-38	54.41	Protein of unknown function, DUF538	[more]
AT5G16380.1	2.2e-32	46.67	Protein of unknown function, DUF538	[more]
AT5G54530.1	5.0e-29	51.30	Protein of unknown function, DUF538	[more]
AT1G61667.1	6.2e-27	41.26	Protein of unknown function, DUF538	[more]

BLAST of CmaCh08G002660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092797\|ref\|XP_008447224.1\|	5.9e-64	78.66	PREDICTED: uncharacterized protein LOC103489718 [Cucumis melo]	[more]
gi\|449465296\|ref\|XP_004150364.1\|	5.0e-63	78.05	PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus]	[more]
gi\|764528643\|ref\|XP_011458136.1\|	5.0e-47	69.70	PREDICTED: uncharacterized protein LOC101296442 [Fragaria vesca subsp. vesca]	[more]
gi\|802546433\|ref\|XP_012084857.1\|	2.5e-46	62.91	PREDICTED: uncharacterized protein LOC105644190 [Jatropha curcas]	[more]
gi\|595801468\|ref\|XP_007201828.1\|	2.5e-46	68.35	hypothetical protein PRUPE_ppa011328mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh08G002660	CmaCh08G002660	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002660.1	CmaCh08G002660.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002660.1.CDS.2	CmaCh08G002660.1.CDS.2	CDS
CmaCh08G002660.1.CDS.1	CmaCh08G002660.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002660.1.five_prime_UTR.1	CmaCh08G002660.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002660.1.exon.2	CmaCh08G002660.1.exon.2	exon
CmaCh08G002660.1.exon.1	CmaCh08G002660.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 25..145 score: 8.9
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 30..138 score: 1.0
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 4..145 score: 6.41
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 2..166 score: 6.6
None	No IPR available	PANTHER	PTHR31676:SF8	SUBFAMILY NOT NAMED	coord: 2..166 score: 6.6