CmaCh07G005040 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh07G005040
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionHomeobox-leucine zipper family protein
LocationCma_Chr07 : 2173580 .. 2174910 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAACAGGAAACTTTTTCAATATTATAAATGTTTCAGACATCATTTTCGGCTATAAATAAGTTGCAATCCCTCTGTAAACCACCTGCACACTCTTCCCCCACTTCACAAACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTAGTGAAGAACTCTACCACCGGTGATAATGGCCACCGCCGCCGACGACAATACATTACTCATCTCGAATCTCTACAGCCCTGGAGTTTATACCCAAATACTCTCCCAACAAGGTCCTTATCTCTAACCTTTATTACTTTCTTCTTCAATGTATCGGAGCTTTTTCAAAAATCATGTTTTTTTTTTTTTTTCAGGTGTGGCGGAGGGAAATAAGCCGATGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGGCCGGGGTGGCGGGGTTGAAAAAGAGGAAGCTGAGTACGGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAAAACCGCCGTGCACGGTGGAAGAACAAGAAGCTCGAAGAGGAATATTCCACTCTCAAGAAAGCTCACGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGGTAAATATTTTTTTTTCTCAATTGATTCGCAATAATATTATATTGATCATGATTTTGTTTTTGTTTTGACCGACTCAAAAATTCATAATCATTTTCTAAATTAGCAAACGAATCCAGAGTGTTGTGTGAGAGGTAAATGTTTTCTTTAATTTTAATATAGATCGGTTAATGGGTTATTTCTAGATGGTGAAACTGAACGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGGTTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGACACCGTGCCACCGCTGGCGCCATCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAAATTAATTAACCTAATTATGTTGACTAATTAGTGTTTAATTTGTACATTTAGCGATACATTTAATGTAATCTACATTTTCTAGAACTAATTGTGTTATTATTATAATTATCTCTCGCCAATATTCTAAACAAAATCAGGAGATTAAGCATTGGGCTTTATGCTCGGCCTGTTTACTGTTAATGGGCCTTTGTTATTGGTCCATTAGTTGGACAACCCAAGATATAAATTAATTTTTTTCCCT

mRNA sequence

GAAAAAACAGGAAACTTTTTCAATATTATAAATGTTTCAGACATCATTTTCGGCTATAAATAAGTTGCAATCCCTCTGTAAACCACCTGCACACTCTTCCCCCACTTCACAAACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTAGTGAAGAACTCTACCACCGGTGATAATGGCCACCGCCGCCGACGACAATACATTACTCATCTCGAATCTCTACAGCCCTGGAGTTTATACCCAAATACTCTCCCAACAAGGTGTGGCGGAGGGAAATAAGCCGATGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGGCCGGGGTGGCGGGGTTGAAAAAGAGGAAGCTGAGTACGGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAAAACCGCCGTGCACGGTGGAAGAACAAGAAGCTCGAAGAGGAATATTCCACTCTCAAGAAAGCTCACGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGTGAAACTGAACGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGGTTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGACACCGTGCCACCGCTGGCGCCATCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAAATTAATTAACCTAATTATGTTGACTAATTAGTGTTTAATTTGTACATTTAGCGATACATTTAATGTAATCTACATTTTCTAGAACTAATTGTGTTATTATTATAATTATCTCTCGCCAATATTCTAAACAAAATCAGGAGATTAAGCATTGGGCTTTATGCTCGGCCTGTTTACTGTTAATGGGCCTTTGTTATTGGTCCATTAGTTGGACAACCCAAGATATAAATTAATTTTTTTCCCT

Coding sequence (CDS)

ATGGCCACCGCCGCCGACGACAATACATTACTCATCTCGAATCTCTACAGCCCTGGAGTTTATACCCAAATACTCTCCCAACAAGGTGTGGCGGAGGGAAATAAGCCGATGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGGCCGGGGTGGCGGGGTTGAAAAAGAGGAAGCTGAGTACGGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAAAACCGCCGTGCACGGTGGAAGAACAAGAAGCTCGAAGAGGAATATTCCACTCTCAAGAAAGCTCACGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGTGAAACTGAACGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGGTTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGACACCGTGCCACCGCTGGCGCCATCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA

Protein sequence

MATAADDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPLAPSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Homology
[Close]
BLAST of CmaCh07G005040 vs. Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 186.0 bits (471), Expect = 4.2e-46
Identity = 113/221 (51.13%), Postives = 149/221 (67.42%), Query Frame = 1 

Query: 3   TAADDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAG---LKKRK 62
           T  D N   IS LY P VYTQI+    V    K  KRRR+++K   A+   G    +KRK
Sbjct: 4   TVDDQNMAFISQLY-PDVYTQIVQPGEV----KQPKRRRKKTKGSVASADGGNGLFRKRK 63

Query: 63  LSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYST 122
           L+ EQV +LEM+FGDEHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ 
Sbjct: 64  LTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNK 123

Query: 123 LKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPL 182
           LK +HD++++    LESE+++L EQL +A+ EIQRL E  E   SNSP SS ++      
Sbjct: 124 LKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANE 183

Query: 183 APSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            P +G+  +G    +Y+ +FY + +   +Y    EW++LY+
Sbjct: 184 TPFFGDYKVGDDGDDYDHLFYPVPE--NSYIDEAEWMSLYI 216

[Close]
BLAST of CmaCh07G005040 vs. Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.8e-44
Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAA------GVAGLKKRK 65
           D N LLIS LY P VYT ++ QQG     KP +RR+R+SK+   A      G    +KRK
Sbjct: 8   DHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGWFRKRK 67

Query: 66  LSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYST 125
           LS EQV++LE++F D+HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E+EY+ 
Sbjct: 68  LSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTK 127

Query: 126 LKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPL 185
           LK A+++ +++   L+SE++ L EQL EA+ EIQRL +  E   SNSP SS         
Sbjct: 128 LKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANHT 187

Query: 186 APSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            P +G+  +G      E++ Y       +Y  G++W++ +M
Sbjct: 188 TPFFGDYDIGFDGEADENLLY-----SPDYIDGLDWMSQFM 220

[Close]
BLAST of CmaCh07G005040 vs. Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 111/226 (49.12%), Postives = 147/226 (65.04%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQ-----ILSQQGVAEGNKPMKRRR-RRSKAKEA------AGVA 65
           DD  +L S +Y      Q     I++Q    E +KP+KRRR RRSK   A      A + 
Sbjct: 8   DDQMMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIG 67

Query: 66  G-LKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKK 125
           G L+KRKL+ EQV +LE +FG+EHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKK
Sbjct: 68  GMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKK 127

Query: 126 LEEEYSTLKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSET 185
           LEEEY+ LK  HD+++L    LES+++KL EQL EA++EI++L E  E++ +NS +SS +
Sbjct: 128 LEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLS 187

Query: 186 MDTVPPLAPSWGELF-LGEYEDVFYCMQQQHGNYSQGME-WLNLYM 217
           ++     AP+  EL     Y   FY +     NY Q ME W  LY+
Sbjct: 188 VEA--NNAPTDFELAPETNYNIPFYMLD---NNYLQSMEYWDGLYV 228

[Close]
BLAST of CmaCh07G005040 vs. Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-31
Identity = 94/229 (41.05%), Postives = 136/229 (59.39%), Query Frame = 1 

Query: 15  LYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAG--------LKKRKLSTEQVK 74
           +++  V   +L+  G  +G +P  RRRRR  A+   G  G         KKR+LS EQV+
Sbjct: 13  MFASYVDASLLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVE 72

Query: 75  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 134
           +LE++F +E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK AHD+
Sbjct: 73  MLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDA 132

Query: 135 ILLQNSHLESEMVKLNEQLREAKNEIQRL------------------VEGSEKIWSNSPT 194
            +L   HLE+E+++L E+L  A+ E++RL                  + GS    + SP+
Sbjct: 133 AILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPS 192

Query: 195 SSETMDTVPPLAPSWGELFLGEYEDVFYCMQQQHGNYSQG--MEWLNLY 216
           SS +  T  P +   G+  LG+ +D+ Y    ++G Y+    +EW +LY
Sbjct: 193 SSFSTGTCQPPSFGGGD-HLGD-DDLVYV--PEYGGYADNSVVEWFSLY 237

[Close]
BLAST of CmaCh07G005040 vs. Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-31
Identity = 96/234 (41.03%), Postives = 137/234 (58.55%), Query Frame = 1 

Query: 15  LYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAG--------LKKRKLSTEQVK 74
           +++  V   +L+  G  +G +P  RRRRR  A+   G  G         KKR+LS EQV+
Sbjct: 13  MFASYVDASLLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVE 72

Query: 75  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 134
           +LE++F +E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK AHD+
Sbjct: 73  MLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDA 132

Query: 135 ILLQNSHLESEMVKLNEQLREAKNEIQRL------------------VEGSEKIWSNSPT 194
            +L   HLE+E+++L E+L  A+ E++RL                  + GS    + SP+
Sbjct: 133 AILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPS 192

Query: 195 SSETMDTVPPLAPSW-----GELFLGEYEDVFYCMQQQHGNYSQG--MEWLNLY 216
           SS +  T  P  PS+     G   LG+ +D+ Y    ++G Y+    +EW +LY
Sbjct: 193 SSFSTGTCQP--PSFGGGGGGGDHLGD-DDLVYV--PEYGGYADNSVVEWFSLY 241

[Close]
BLAST of CmaCh07G005040 vs. TrEMBL
Match: A0A0A0KGE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501990 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.0e-75
Identity = 159/213 (74.65%), Postives = 180/213 (84.51%), Query Frame = 1 

Query: 7   DNTLLISNLYSPGVYTQ-ILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 66
           DN+LL+S+LY+P VYTQ +L QQG  EG+KP KRRRRRSKAKE  G AGLKKRKLS+EQV
Sbjct: 11  DNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGGGAAGLKKRKLSSEQV 70

Query: 67  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 126
           KLLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD
Sbjct: 71  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 130

Query: 127 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDTVPPLA-PS 186
           S++LQ SHLESE++K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+ V   A   
Sbjct: 131 SVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 190

Query: 187 WGELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
            GELF  EYEDVFYCMQ    NY+QG+ W LNL
Sbjct: 191 LGELFFEEYEDVFYCMQD--NNYNQGLNWALNL 221

[Close]
BLAST of CmaCh07G005040 vs. TrEMBL
Match: M5WGL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011343mg PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.0e-59
Identity = 140/215 (65.12%), Postives = 164/215 (76.28%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 65
           DD+ LLIS+LY   VYTQI+ QQG +   KP KRRR++SK+ EA G AGLKKRKL+ EQV
Sbjct: 13  DDHMLLISHLYPSDVYTQIVPQQGAS---KP-KRRRKKSKSGEAGG-AGLKKRKLTAEQV 72

Query: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125
            LLE+NFG+EHKLESE+KDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS LKK HD
Sbjct: 73  NLLELNFGNEHKLESEKKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKEHD 132

Query: 126 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKI----WSNSPTSSETMDTVPPLAP 185
           S + +N  LESEM KL EQ+ EA+ EI+RL   SE++     SNSP+SS +MD + P  P
Sbjct: 133 STVSENRKLESEMSKLKEQISEAEKEIRRL---SERVDHGGSSNSPSSSLSMDAIDP--P 192

Query: 186 SWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
             GE  + EY+DVFY  Q    NY  GMEW+NLYM
Sbjct: 193 FLGEFGVEEYDDVFYMPQ---NNYIHGMEWMNLYM 214

[Close]
BLAST of CmaCh07G005040 vs. TrEMBL
Match: W9RLH1_9ROSA (Homeobox-leucine zipper protein ATHB-40 OS=Morus notabilis GN=L484_009043 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.6e-58
Identity = 131/212 (61.79%), Postives = 165/212 (77.83%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 65
           +D+  LIS LY PGVYTQ++ QQG A   KP +RRRR++K+ E  G A  KKRKLS+EQV
Sbjct: 7   EDHMALISQLY-PGVYTQMVPQQGEA---KP-RRRRRKNKSGEGGGCAAAKKRKLSSEQV 66

Query: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125
            LLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK HD
Sbjct: 67  NLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKMHD 126

Query: 126 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTV-PPLAPSWG 185
           +++++   LESE+++L EQ+ +AK EIQRL E +E + SNSP+SS +++ V PP    +G
Sbjct: 127 NVVVEKCRLESEVLQLKEQIMDAKKEIQRLAERAEGVSSNSPSSSLSVEAVEPPFLGEFG 186

Query: 186 ELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            +  G Y+++FY  +    NY  GMEW+NLY+
Sbjct: 187 VVSEG-YDNMFYAAE---NNYIHGMEWVNLYL 209

[Close]
BLAST of CmaCh07G005040 vs. TrEMBL
Match: A0A067KIZ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12260 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-53
Identity = 128/218 (58.72%), Postives = 160/218 (73.39%), Query Frame = 1 

Query: 1   MATAADDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKL 60
           M+   +D+ +L+S LY PGVYTQ++ QQG A   KP +RRR+++K  E  GV G KKRKL
Sbjct: 5   MSNKVEDHMVLLSQLY-PGVYTQMVPQQGEA---KP-RRRRKKNKGGEG-GVGGAKKRKL 64

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           S+EQV LLE NFG+EHKLESERKD+LASELGLDPRQVAVWFQNRRARWKNKKLEEEY+ L
Sbjct: 65  SSEQVNLLEKNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKL 124

Query: 121 KKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPLA 180
           K AH+SI+++   LESE++KL EQL EA+NEI RL E  + + SNSP+S+ +M+ + P  
Sbjct: 125 KTAHESIVVEKCRLESEVLKLKEQLSEAENEIHRLTERIDGVSSNSPSSTLSMEAMKP-- 184

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLN--LYM 217
              GE  +  Y D+FY  +     Y  GMEW N  LYM
Sbjct: 185 TFLGEFGMEGYGDIFYMPENY---YIHGMEWFNDQLYM 211

[Close]
BLAST of CmaCh07G005040 vs. TrEMBL
Match: A0A0B2RV77_GLYSO (Homeobox-leucine zipper protein ATHB-40 OS=Glycine soja GN=glysoja_003267 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.6e-53
Identity = 122/212 (57.55%), Postives = 155/212 (73.11%), Query Frame = 1 

Query: 7   DNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQVK 66
           D+ +L+S L     YTQI++QQG  +  KP +RR +++K  E A     KKRKLS +QV 
Sbjct: 9   DHMMLMSQLLPADAYTQIIAQQG--DTKKPRRRRNKKNKGGENAASEANKKRKLSDDQVN 68

Query: 67  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 126
           LLE NFG+EHKLESERKDRLA ELGLDPRQVAVWFQNRRARWKNKKLEEEYS LKK H++
Sbjct: 69  LLEQNFGNEHKLESERKDRLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKNHEA 128

Query: 127 ILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTS--SETMDTVPPLAPSWG 186
            LL+   LE+E++KL EQL EA+ EIQRL+E +E++ SNS +S  S++M+ V P  P +G
Sbjct: 129 TLLEKCRLETEVLKLKEQLSEAEKEIQRLLESAERVPSNSSSSSQSQSMEAVDP--PFFG 188

Query: 187 ELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           E  +  YED  + + + H  Y  GMEW+NLYM
Sbjct: 189 EFGVDGYEDDVFYVPEIH--YINGMEWINLYM 214

[Close]
BLAST of CmaCh07G005040 vs. TAIR10
Match: AT4G36740.1 (AT4G36740.1 homeobox protein 40)

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-47
Identity = 113/221 (51.13%), Postives = 149/221 (67.42%), Query Frame = 1 

Query: 3   TAADDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAG---LKKRK 62
           T  D N   IS LY P VYTQI+    V    K  KRRR+++K   A+   G    +KRK
Sbjct: 4   TVDDQNMAFISQLY-PDVYTQIVQPGEV----KQPKRRRKKTKGSVASADGGNGLFRKRK 63

Query: 63  LSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYST 122
           L+ EQV +LEM+FGDEHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ 
Sbjct: 64  LTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNK 123

Query: 123 LKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPL 182
           LK +HD++++    LESE+++L EQL +A+ EIQRL E  E   SNSP SS ++      
Sbjct: 124 LKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANE 183

Query: 183 APSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            P +G+  +G    +Y+ +FY + +   +Y    EW++LY+
Sbjct: 184 TPFFGDYKVGDDGDDYDHLFYPVPE--NSYIDEAEWMSLYI 216

[Close]
BLAST of CmaCh07G005040 vs. TAIR10
Match: AT2G18550.1 (AT2G18550.1 homeobox protein 21)

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-45
Identity = 108/221 (48.87%), Postives = 146/221 (66.06%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAA------GVAGLKKRK 65
           D N LLIS LY P VYT ++ QQG     KP +RR+R+SK+   A      G    +KRK
Sbjct: 8   DHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGWFRKRK 67

Query: 66  LSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYST 125
           LS EQV++LE++F D+HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E+EY+ 
Sbjct: 68  LSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTK 127

Query: 126 LKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPL 185
           LK A+++ +++   L+SE++ L EQL EA+ EIQRL +  E   SNSP SS         
Sbjct: 128 LKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANHT 187

Query: 186 APSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            P +G+  +G      E++ Y       +Y  G++W++ +M
Sbjct: 188 TPFFGDYDIGFDGEADENLLY-----SPDYIDGLDWMSQFM 220

[Close]
BLAST of CmaCh07G005040 vs. TAIR10
Match: AT5G66700.1 (AT5G66700.1 homeobox 53)

HSP 1 Score: 161.0 bits (406), Expect = 8.2e-40
Identity = 111/226 (49.12%), Postives = 147/226 (65.04%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQ-----ILSQQGVAEGNKPMKRRR-RRSKAKEA------AGVA 65
           DD  +L S +Y      Q     I++Q    E +KP+KRRR RRSK   A      A + 
Sbjct: 8   DDQMMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIG 67

Query: 66  G-LKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKK 125
           G L+KRKL+ EQV +LE +FG+EHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKK
Sbjct: 68  GMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKK 127

Query: 126 LEEEYSTLKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSET 185
           LEEEY+ LK  HD+++L    LES+++KL EQL EA++EI++L E  E++ +NS +SS +
Sbjct: 128 LEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLS 187

Query: 186 MDTVPPLAPSWGELF-LGEYEDVFYCMQQQHGNYSQGME-WLNLYM 217
           ++     AP+  EL     Y   FY +     NY Q ME W  LY+
Sbjct: 188 VEA--NNAPTDFELAPETNYNIPFYMLD---NNYLQSMEYWDGLYV 228

[Close]
BLAST of CmaCh07G005040 vs. TAIR10
Match: AT3G01470.1 (AT3G01470.1 homeobox 1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 1 

Query: 56  KKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 115
           KKR+L+TEQV LLE +F  E+KLE ERK +LA +LGL PRQVAVWFQNRRARWK K+LE 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 116 EYSTLKKA-------HDSILLQNSHLESEMVKLNEQL---REAKNE 152
           +Y  LK         +DSI++ N  L SE+  L E+L   +E  NE
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANE 173

[Close]
BLAST of CmaCh07G005040 vs. TAIR10
Match: AT5G65310.1 (AT5G65310.1 homeobox protein 5)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 1 

Query: 49  AAGVAGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARW 108
           A+  A  KKR+L  EQVK LE NF  ++KLE ERK +LA ELGL PRQVA+WFQNRRARW
Sbjct: 65  ASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARW 124

Query: 109 KNKKLEEEYSTLKKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSN 166
           K K+LE +Y  LK   D++      L+ +   L  Q++E K ++   VEG + I  N
Sbjct: 125 KTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLN--VEGVKGIEEN 179

[Close]
BLAST of CmaCh07G005040 vs. NCBI nr
Match: gi|449451501|ref|XP_004143500.1| (PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 4.3e-75
Identity = 159/213 (74.65%), Postives = 180/213 (84.51%), Query Frame = 1 

Query: 7   DNTLLISNLYSPGVYTQ-ILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 66
           DN+LL+S+LY+P VYTQ +L QQG  EG+KP KRRRRRSKAKE  G AGLKKRKLS+EQV
Sbjct: 11  DNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGGGAAGLKKRKLSSEQV 70

Query: 67  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 126
           KLLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD
Sbjct: 71  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 130

Query: 127 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDTVPPLA-PS 186
           S++LQ SHLESE++K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+ V   A   
Sbjct: 131 SVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 190

Query: 187 WGELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
            GELF  EYEDVFYCMQ    NY+QG+ W LNL
Sbjct: 191 LGELFFEEYEDVFYCMQD--NNYNQGLNWALNL 221

[Close]
BLAST of CmaCh07G005040 vs. NCBI nr
Match: gi|659081044|ref|XP_008441120.1| (PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 5.7e-75
Identity = 161/212 (75.94%), Postives = 179/212 (84.43%), Query Frame = 1 

Query: 8   NTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAG-LKKRKLSTEQVK 67
           N+LL S+LY+P VYTQ+L QQG  EGNKP KRRRRRSKAKE  G AG LKKRKLS+EQVK
Sbjct: 13  NSLLSSHLYNPEVYTQVLPQQGTGEGNKPTKRRRRRSKAKEGGGGAGSLKKRKLSSEQVK 72

Query: 68  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 127
           LLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS
Sbjct: 73  LLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 132

Query: 128 ILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDTVPPLA-PSW 187
           +LLQ SHLESE+VK+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+ V   A    
Sbjct: 133 VLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVPL 192

Query: 188 GELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
           GELF  EYEDVFYCMQ    NY+QG++W LNL
Sbjct: 193 GELFFEEYEDVFYCMQD--NNYNQGLDWALNL 222

[Close]
BLAST of CmaCh07G005040 vs. NCBI nr
Match: gi|595820944|ref|XP_007204731.1| (hypothetical protein PRUPE_ppa011343mg [Prunus persica])

HSP 1 Score: 236.5 bits (602), Expect = 4.4e-59
Identity = 140/215 (65.12%), Postives = 164/215 (76.28%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 65
           DD+ LLIS+LY   VYTQI+ QQG +   KP KRRR++SK+ EA G AGLKKRKL+ EQV
Sbjct: 13  DDHMLLISHLYPSDVYTQIVPQQGAS---KP-KRRRKKSKSGEAGG-AGLKKRKLTAEQV 72

Query: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125
            LLE+NFG+EHKLESE+KDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS LKK HD
Sbjct: 73  NLLELNFGNEHKLESEKKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKEHD 132

Query: 126 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKI----WSNSPTSSETMDTVPPLAP 185
           S + +N  LESEM KL EQ+ EA+ EI+RL   SE++     SNSP+SS +MD + P  P
Sbjct: 133 STVSENRKLESEMSKLKEQISEAEKEIRRL---SERVDHGGSSNSPSSSLSMDAIDP--P 192

Query: 186 SWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
             GE  + EY+DVFY  Q    NY  GMEW+NLYM
Sbjct: 193 FLGEFGVEEYDDVFYMPQ---NNYIHGMEWMNLYM 214

[Close]
BLAST of CmaCh07G005040 vs. NCBI nr
Match: gi|645272939|ref|XP_008241637.1| (PREDICTED: homeobox-leucine zipper protein ATHB-40 [Prunus mume])

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-58
Identity = 139/212 (65.57%), Postives = 160/212 (75.47%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 65
           DD+ LLIS+LY   VYTQI+ QQG +   KP KRRR++SK+ EA G AG KKRKL+ EQV
Sbjct: 13  DDHMLLISHLYPSDVYTQIVPQQGAS---KP-KRRRKKSKSGEAGG-AGHKKRKLTAEQV 72

Query: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125
            LLE+NFG+EHKLESE+KDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS LKK HD
Sbjct: 73  NLLELNFGNEHKLESEKKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKEHD 132

Query: 126 SILLQNSHLESEMVKLNEQLREAKNEIQRL-VEGSEKIWSNSPTSSETMDTVPPLAPSWG 185
           + + +N  LESEM KL EQL EA+ EIQRL V       SNSP+SS +MD + P  P  G
Sbjct: 133 NTVSENRKLESEMSKLKEQLSEAEKEIQRLSVRVDHGGSSNSPSSSLSMDAIDP--PFLG 192

Query: 186 ELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           E  + EY+DVFY  Q    NY  GMEW+NLYM
Sbjct: 193 EFGVEEYDDVFYMPQ---NNYIHGMEWMNLYM 214

[Close]
BLAST of CmaCh07G005040 vs. NCBI nr
Match: gi|703111325|ref|XP_010099829.1| (Homeobox-leucine zipper protein ATHB-40 [Morus notabilis])

HSP 1 Score: 233.4 bits (594), Expect = 3.7e-58
Identity = 131/212 (61.79%), Postives = 165/212 (77.83%), Query Frame = 1 

Query: 6   DDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 65
           +D+  LIS LY PGVYTQ++ QQG A   KP +RRRR++K+ E  G A  KKRKLS+EQV
Sbjct: 7   EDHMALISQLY-PGVYTQMVPQQGEA---KP-RRRRRKNKSGEGGGCAAAKKRKLSSEQV 66

Query: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125
            LLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK HD
Sbjct: 67  NLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKMHD 126

Query: 126 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTV-PPLAPSWG 185
           +++++   LESE+++L EQ+ +AK EIQRL E +E + SNSP+SS +++ V PP    +G
Sbjct: 127 NVVVEKCRLESEVLQLKEQIMDAKKEIQRLAERAEGVSSNSPSSSLSVEAVEPPFLGEFG 186

Query: 186 ELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            +  G Y+++FY  +    NY  GMEW+NLY+
Sbjct: 187 VVSEG-YDNMFYAAE---NNYIHGMEWVNLYL 209

The following BLAST results are available for this feature:
BLAST of CmaCh07G005040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATB40_ARATH4.2e-4651.13Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 ... [more]
ATB21_ARATH6.8e-4448.87Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 ... [more]
ATB53_ARATH1.5e-3849.12Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 ... [more]
HOX14_ORYSJ2.3e-3141.05Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 P... [more]
HOX14_ORYSI8.6e-3141.03Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=... [more]
BLAST of CmaCh07G005040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGE8_CUCSA3.0e-7574.65Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501990 PE=4 SV=1[more]
M5WGL9_PRUPE3.0e-5965.12Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011343mg PE=4 SV=1[more]
W9RLH1_9ROSA2.6e-5861.79Homeobox-leucine zipper protein ATHB-40 OS=Morus notabilis GN=L484_009043 PE=4 S... [more]
A0A067KIZ9_JATCU3.3e-5358.72Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12260 PE=4 SV=1[more]
A0A0B2RV77_GLYSO5.6e-5357.55Homeobox-leucine zipper protein ATHB-40 OS=Glycine soja GN=glysoja_003267 PE=4 S... [more]
BLAST of CmaCh07G005040 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36740.12.4e-4751.13 homeobox protein 40[more]
AT2G18550.13.8e-4548.87 homeobox protein 21[more]
AT5G66700.18.2e-4049.12 homeobox 53[more]
AT3G01470.13.5e-2255.66 homeobox 1[more]
AT5G65310.11.7e-2149.57 homeobox protein 5[more]
BLAST of CmaCh07G005040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451501|ref|XP_004143500.1|4.3e-7574.65PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis sativus][more]
gi|659081044|ref|XP_008441120.1|5.7e-7575.94PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo][more]
gi|595820944|ref|XP_007204731.1|4.4e-5965.12hypothetical protein PRUPE_ppa011343mg [Prunus persica][more]
gi|645272939|ref|XP_008241637.1|2.2e-5865.57PREDICTED: homeobox-leucine zipper protein ATHB-40 [Prunus mume][more]
gi|703111325|ref|XP_010099829.1|3.7e-5861.79Homeobox-leucine zipper protein ATHB-40 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000047HTH_motif
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G005040.1CmaCh07G005040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 82..91
score: 1.4E-5coord: 91..107
score: 1.
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 57..110
score: 1.1
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 54..115
score: 3.1
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 56..111
score: 16
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 58..118
score: 2.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 56..120
score: 5.13
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 86..109
scor
NoneNo IPR availableunknownCoilCoilcoord: 103..162
scor
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 32..173
score: 7.7
NoneNo IPR availablePANTHERPTHR24326:SF281HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATEDcoord: 32..173
score: 7.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh07G005040Cucsa.104950Cucumber (Gy14) v1cgycmaB0235
CmaCh07G005040Cla014193Watermelon (97103) v1cmawmB826
CmaCh07G005040Csa6G501990Cucumber (Chinese Long) v2cmacuB877
CmaCh07G005040MELO3C017549Melon (DHL92) v3.5.1cmameB796
CmaCh07G005040MELO3C007809Melon (DHL92) v3.5.1cmameB809
CmaCh07G005040ClCG01G019340Watermelon (Charleston Gray)cmawcgB754
CmaCh07G005040CSPI06G30800Wild cucumber (PI 183967)cmacpiB893
CmaCh07G005040CmoCh03G007980Cucurbita moschata (Rifu)cmacmoB858
CmaCh07G005040Lsi01G006990Bottle gourd (USVL1VR-Ls)cmalsiB786
CmaCh07G005040Cp4.1LG10g00850Cucurbita pepo (Zucchini)cmacpeB866
CmaCh07G005040Cp4.1LG19g09540Cucurbita pepo (Zucchini)cmacpeB880
CmaCh07G005040MELO3C007809.2Melon (DHL92) v3.6.1cmamedB907
CmaCh07G005040CsaV3_6G046050Cucumber (Chinese Long) v3cmacucB1035
CmaCh07G005040Cla97C01G018750Watermelon (97103) v2cmawmbB875
CmaCh07G005040CsGy6G030330Cucumber (Gy14) v2cgybcmaB861
CmaCh07G005040Carg14172Silver-seed gourdcarcmaB1289
CmaCh07G005040Carg16034Silver-seed gourdcarcmaB1056
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh07G005040CmaCh03G007690Cucurbita maxima (Rimu)cmacmaB523
CmaCh07G005040CmaCh04G007730Cucurbita maxima (Rimu)cmacmaB546
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh07G005040Watermelon (97103) v2cmawmbB904
CmaCh07G005040Wax gourdcmawgoB1072
CmaCh07G005040Cucurbita moschata (Rifu)cmacmoB875
CmaCh07G005040Cucurbita moschata (Rifu)cmacmoB843
CmaCh07G005040Cucurbita pepo (Zucchini)cmacpeB876
CmaCh07G005040Bottle gourd (USVL1VR-Ls)cmalsiB808
CmaCh07G005040Cucumber (Gy14) v2cgybcmaB266
CmaCh07G005040Melon (DHL92) v3.6.1cmamedB885
CmaCh07G005040Silver-seed gourdcarcmaB0571
CmaCh07G005040Silver-seed gourdcarcmaB1360
CmaCh07G005040Silver-seed gourdcarcmaB1415
CmaCh07G005040Cucumber (Chinese Long) v3cmacucB1010