Carg16034 (gene) Silver-seed gourd

NameCarg16034
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHomeobox-leucine zipper protein like
LocationCucurbita_argyrosperma_scaffold_090 : 315387 .. 316473 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTTCACATACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTACTGAAGAACTCTACCGCCGGTGATAATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTCCTTATCTCCATCCTTTATTAGTTTCTTCTTCGTGGTATTGGAGCTTTTTCAAAAATCATGTTTTTTTTTTTTTTTTTTTTTTCAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGGTAAAAATATATATTTTTTTTCAATTGATTTGAAAGTAGACGAAACGACTCTCCACAATGGTATGATATTGTCCATTTTAGTATAAAGTCTCACGGTTTTGCTTTAGGCTTCTCCAAGATGCCTCGTACCAATGGAGATAGTATTATTTGATTATAAACTCATGAACATTCCCTAAATTAGTAGATGTGGGACTTTCATCATCTAACCCTTCGTATTTTATGTGTTAAATGTTTTCTTTGATTTTAATGTATACCGATTAATGGGTTATTTTTAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA

mRNA sequence

CACTTCACATACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTACTGAAGAACTCTACCGCCGGTGATAATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA

Coding sequence (CDS)

ATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA

Protein sequence

MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
BLAST of Carg16034 vs. NCBI nr
Match: XP_023003086.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima])

HSP 1 Score: 386.3 bits (991), Expect = 6.6e-104
Identity = 196/216 (90.74%), Postives = 199/216 (92.13%), Query Frame = 0

Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKL 60
           MA A DD+TLLISNLYSPGV+TQIL QQG AEGNKP KR      AKEA G AGLKKRKL
Sbjct: 1   MATAADDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEM KL+EQLREAKNEIQRLVEGSEKIWSNSPTSSETMD VPP  
Sbjct: 121 KKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPLA 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

BLAST of Carg16034 vs. NCBI nr
Match: XP_023518445.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 198/216 (91.67%), Postives = 201/216 (93.06%), Query Frame = 0

Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKL 60
           MAAADDD+TLLISNLYSPGV+TQILPQQGAAEGNKPT  XXXXXX          KKRKL
Sbjct: 1   MAAADDDNTLLISNLYSPGVYTQILPQQGAAEGNKPTXXXXXXXXXXXXXXXXXXKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSI+LQNSHLE EM KLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPP 
Sbjct: 121 KKAHDSIILQNSHLEYEMTKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPA 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

BLAST of Carg16034 vs. NCBI nr
Match: XP_022963111.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata])

HSP 1 Score: 375.9 bits (964), Expect = 9.0e-101
Identity = 198/216 (91.67%), Postives = 202/216 (93.52%), Query Frame = 0

Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKL 60
           MAAADDD+TLL+SNLYSPGVFTQIL QQGAAEGNKP   XXXXXX          KKRKL
Sbjct: 1   MAAADDDNTLLMSNLYSPGVFTQILTQQGAAEGNKPXXXXXXXXXXXXXXXXXXXKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWS+SPTSSETMDA+PPPV
Sbjct: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSSSPTSSETMDAMPPPV 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

BLAST of Carg16034 vs. NCBI nr
Match: XP_004143500.1 (PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1 hypothetical protein Csa_6G501990 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 3.3e-63
Identity = 147/215 (68.37%), Postives = 169/215 (78.60%), Query Frame = 0

Query: 5   DDDSTLLISNLYSPGVFT-QILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKLSTE 64
           D D++LL+S+LY+P V+T Q+LPQQG  EG+KPT  XXXXXX               S+E
Sbjct: 9   DADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXXXXSSE 68

Query: 65  QVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 124
           QVKLLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA
Sbjct: 69  QVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 128

Query: 125 HDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDAV-PPPV 184
           HDS++LQ SHLESE+ K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+AV    V
Sbjct: 129 HDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAV 188

Query: 185 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
              GELF  EYEDVFYCMQ    NY+QG+ W LNL
Sbjct: 189 VPLGELFFEEYEDVFYCMQD--NNYNQGLNWALNL 221

BLAST of Carg16034 vs. NCBI nr
Match: XP_008441120.1 (PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 4.8e-62
Identity = 146/212 (68.87%), Postives = 166/212 (78.30%), Query Frame = 0

Query: 8   STLLISNLYSPGVFTQILPQQGAAEGNKP-TKRXXXXXXAKEATGAAGLKKRKLSTEQVK 67
           ++LL S+LY+P V+TQ+LPQQG  EGNKP    XXXXXX               S+EQVK
Sbjct: 13  NSLLSSHLYNPEVYTQVLPQQGTGEGNKPXXXXXXXXXXXXXXXXXXXXXXXXXSSEQVK 72

Query: 68  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 127
           LLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS
Sbjct: 73  LLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 132

Query: 128 ILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDAV-PPPVPSW 187
           +LLQ SHLESE+ K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+AV    V   
Sbjct: 133 VLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVPL 192

Query: 188 GELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
           GELF  EYEDVFYCMQ    NY+QG++W LNL
Sbjct: 193 GELFFEEYEDVFYCMQD--NNYNQGLDWALNL 222

BLAST of Carg16034 vs. TAIR10
Match: AT4G36740.1 (homeobox protein 40)

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-45
Identity = 107/216 (49.54%), Postives = 143/216 (66.20%), Query Frame = 0

Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKLSTEQ 64
           DD +   IS LY P V+TQI+ Q G  +  K  ++      A    G    +KRKL+ EQ
Sbjct: 6   DDQNMAFISQLY-PDVYTQIV-QPGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQ 65

Query: 65  VKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAH 124
           V +LEM+FGDEHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK +H
Sbjct: 66  VNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSH 125

Query: 125 DSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSWG 184
           D++++    LESE+ +L EQL +A+ EIQRL E  E   SNSP SS ++       P +G
Sbjct: 126 DNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANETPFFG 185

Query: 185 ELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           +  +G    +Y+ +FY + +   +Y    EW++LY+
Sbjct: 186 DYKVGDDGDDYDHLFYPVPE--NSYIDEAEWMSLYI 216

BLAST of Carg16034 vs. TAIR10
Match: AT2G18550.1 (homeobox protein 21)

HSP 1 Score: 168.3 bits (425), Expect = 5.1e-42
Identity = 108/222 (48.65%), Postives = 144/222 (64.86%), Query Frame = 0

Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGA------AGLKKR 64
           DD + LLIS LY P V+T ++PQQG     KPT+ XXXXXX                +KR
Sbjct: 7   DDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRXXXXXXXXXXXXXXXXXXXNGWFRKR 66

Query: 65  KLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 124
           KLS EQV++LE++F D+HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E+EY+
Sbjct: 67  KLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYT 126

Query: 125 TLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPP 184
            LK A+++ +++   L+SE+  L EQL EA+ EIQRL +  E   SNSP SS        
Sbjct: 127 KLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANH 186

Query: 185 PVPSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
             P +G+  +G      E++ Y       +Y  G++W++ +M
Sbjct: 187 TTPFFGDYDIGFDGEADENLLY-----SPDYIDGLDWMSQFM 220

BLAST of Carg16034 vs. TAIR10
Match: AT5G66700.1 (homeobox 53)

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-32
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 0

Query: 55  LKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLE 114
           L+KRKL+ EQV +LE +FG+EHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKKLE
Sbjct: 70  LRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLE 129

Query: 115 EEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMD 174
           EEY+ LK  HD+++L    LES++ KL+EQL EA               +NS +SS +++
Sbjct: 130 EEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAXXXXXXXXXXXXXXPTNSSSSSLSVE 189

Query: 175 AVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGME-WLNLYM 217
           A   P   +       Y   FY +     NY Q ME W  LY+
Sbjct: 190 ANNAPT-DFELAPETNYNIPFYMLD---NNYLQSMEYWDGLYV 228

BLAST of Carg16034 vs. TAIR10
Match: AT2G22430.1 (homeobox protein 6)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-18
Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 0

Query: 48  EATGAAGL--KKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRR 107
           E  G  GL  KKR+LS  QVK LE NF  E+KLE ERK +LA ELGL PRQVAVWFQNRR
Sbjct: 52  EERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRR 111

Query: 108 ARWKNKKLEEEY 118
           ARWK K+LE++Y
Sbjct: 112 ARWKTKQLEKDY 123

BLAST of Carg16034 vs. TAIR10
Match: AT4G40060.1 (homeobox protein 16)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-18
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0

Query: 56  KKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 115
           KKR+L  +QVK LE NF  E+KLE ERK +LA ELGL PRQVAVWFQNRRARWK K+LE+
Sbjct: 59  KKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 118

Query: 116 EY 118
           +Y
Sbjct: 119 DY 120

BLAST of Carg16034 vs. Swiss-Prot
Match: sp|O23208|ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44
Identity = 107/216 (49.54%), Postives = 143/216 (66.20%), Query Frame = 0

Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKLSTEQ 64
           DD +   IS LY P V+TQI+ Q G  +  K  ++      A    G    +KRKL+ EQ
Sbjct: 6   DDQNMAFISQLY-PDVYTQIV-QPGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQ 65

Query: 65  VKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAH 124
           V +LEM+FGDEHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK +H
Sbjct: 66  VNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSH 125

Query: 125 DSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSWG 184
           D++++    LESE+ +L EQL +A+ EIQRL E  E   SNSP SS ++       P +G
Sbjct: 126 DNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANETPFFG 185

Query: 185 ELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           +  +G    +Y+ +FY + +   +Y    EW++LY+
Sbjct: 186 DYKVGDDGDDYDHLFYPVPE--NSYIDEAEWMSLYI 216

BLAST of Carg16034 vs. Swiss-Prot
Match: sp|Q9ZU70|ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 9.3e-41
Identity = 108/222 (48.65%), Postives = 144/222 (64.86%), Query Frame = 0

Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGA------AGLKKR 64
           DD + LLIS LY P V+T ++PQQG     KPT+ XXXXXX                +KR
Sbjct: 7   DDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRXXXXXXXXXXXXXXXXXXXNGWFRKR 66

Query: 65  KLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 124
           KLS EQV++LE++F D+HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E+EY+
Sbjct: 67  KLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYT 126

Query: 125 TLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPP 184
            LK A+++ +++   L+SE+  L EQL EA+ EIQRL +  E   SNSP SS        
Sbjct: 127 KLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANH 186

Query: 185 PVPSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
             P +G+  +G      E++ Y       +Y  G++W++ +M
Sbjct: 187 TTPFFGDYDIGFDGEADENLLY-----SPDYIDGLDWMSQFM 220

BLAST of Carg16034 vs. Swiss-Prot
Match: sp|Q9LVR0|ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-31
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 0

Query: 55  LKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLE 114
           L+KRKL+ EQV +LE +FG+EHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKKLE
Sbjct: 70  LRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLE 129

Query: 115 EEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMD 174
           EEY+ LK  HD+++L    LES++ KL+EQL EA               +NS +SS +++
Sbjct: 130 EEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAXXXXXXXXXXXXXXPTNSSSSSLSVE 189

Query: 175 AVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGME-WLNLYM 217
           A   P   +       Y   FY +     NY Q ME W  LY+
Sbjct: 190 ANNAPT-DFELAPETNYNIPFYMLD---NNYLQSMEYWDGLYV 228

BLAST of Carg16034 vs. Swiss-Prot
Match: sp|Q7XI85|HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25
Identity = 76/173 (43.93%), Postives = 107/173 (61.85%), Query Frame = 0

Query: 63  EQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 122
           EQV++LE++F +E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK 
Sbjct: 69  EQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKH 128

Query: 123 AHDSILLQNSHLESEMAKLSEQLREAKNEIQRL------------------VEGSEKIWS 182
           AHD+ +L   HLE+E+ +L E+L  A+ E++RL                  + GS    +
Sbjct: 129 AHDAAILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVA 188

Query: 183 NSPTSSETMDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQG--MEWLNLY 216
            SP+SS +     PP    G+  LG+ +D+ Y    ++G Y+    +EW +LY
Sbjct: 189 GSPSSSFSTGTCQPPSFGGGD-HLGD-DDLVYV--PEYGGYADNSVVEWFSLY 237

BLAST of Carg16034 vs. Swiss-Prot
Match: sp|A2YN17|HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-23
Identity = 57/93 (61.29%), Postives = 75/93 (80.65%), Query Frame = 0

Query: 63  EQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 122
           EQV++LE++F +E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK 
Sbjct: 69  EQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKH 128

Query: 123 AHDSILLQNSHLESEMAKLSEQLREAKNEIQRL 156
           AHD+ +L   HLE+E+ +L E+L  A+ E++RL
Sbjct: 129 AHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161

BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A0A0KGE8|A0A0A0KGE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.2e-63
Identity = 147/215 (68.37%), Postives = 169/215 (78.60%), Query Frame = 0

Query: 5   DDDSTLLISNLYSPGVFT-QILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKLSTE 64
           D D++LL+S+LY+P V+T Q+LPQQG  EG+KPT  XXXXXX               S+E
Sbjct: 9   DADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXXXXSSE 68

Query: 65  QVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 124
           QVKLLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA
Sbjct: 69  QVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 128

Query: 125 HDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDAV-PPPV 184
           HDS++LQ SHLESE+ K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+AV    V
Sbjct: 129 HDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAV 188

Query: 185 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
              GELF  EYEDVFYCMQ    NY+QG+ W LNL
Sbjct: 189 VPLGELFFEEYEDVFYCMQD--NNYNQGLNWALNL 221

BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A1S3B2Q4|A0A1S3B2Q4_CUCME (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.2e-62
Identity = 146/212 (68.87%), Postives = 166/212 (78.30%), Query Frame = 0

Query: 8   STLLISNLYSPGVFTQILPQQGAAEGNKP-TKRXXXXXXAKEATGAAGLKKRKLSTEQVK 67
           ++LL S+LY+P V+TQ+LPQQG  EGNKP    XXXXXX               S+EQVK
Sbjct: 13  NSLLSSHLYNPEVYTQVLPQQGTGEGNKPXXXXXXXXXXXXXXXXXXXXXXXXXSSEQVK 72

Query: 68  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 127
           LLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS
Sbjct: 73  LLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 132

Query: 128 ILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDAV-PPPVPSW 187
           +LLQ SHLESE+ K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+AV    V   
Sbjct: 133 VLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVPL 192

Query: 188 GELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
           GELF  EYEDVFYCMQ    NY+QG++W LNL
Sbjct: 193 GELFFEEYEDVFYCMQD--NNYNQGLDWALNL 222

BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A199UBK8|A0A199UBK8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S025300 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.3e-51
Identity = 124/212 (58.49%), Postives = 148/212 (69.81%), Query Frame = 0

Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKLSTEQ 64
           D D   LIS LY PGV+TQ++PQQG     KP +R       +   G  G KKRKLS  Q
Sbjct: 11  DQDHMALISQLY-PGVYTQMVPQQGE---TKPRRRRRKNRGGE--NGVPGHKKRKLSAHQ 70

Query: 65  VKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAH 124
           V LLE+NFG+EHKLESERKD+LASELGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK AH
Sbjct: 71  VNLLEVNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTAH 130

Query: 125 DSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSWG 184
           +SI+++  HLESE+ KL E+L EA+ EIQRL E  + + SNS  SS +M A+    P  G
Sbjct: 131 ESIVVEKCHLESEVLKLKEKLLEAEKEIQRLTERVDGVSSNS-CSSLSMKAM--NTPFLG 190

Query: 185 ELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           E  +  Y D+FY  +    NY  GMEW+NLYM
Sbjct: 191 EFGIEGYGDIFYMPEI---NYIHGMEWVNLYM 210

BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A1R3GFL1|A0A1R3GFL1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_26215 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50
Identity = 132/214 (61.68%), Postives = 151/214 (70.56%), Query Frame = 0

Query: 6   DDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKLSTEQV 65
           +D   LIS +Y PGV+TQ+  QQG    +KP  RXXXXXX       AG KKRKLS EQV
Sbjct: 5   EDHMALISQMY-PGVYTQMATQQGE---SKP--RXXXXXXXXXENSLAGAKKRKLSQEQV 64

Query: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125
            LLE+NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS LK AHD
Sbjct: 65  NLLELNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSKLKSAHD 124

Query: 126 SILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSE-TMDAVPPPVPSWG 185
             +L    LESE+ KL EQL EA+ EIQRL E  + + SNSP SS  +M+A+  P     
Sbjct: 125 GAVLDKCRLESEVLKLKEQLCEAEKEIQRLTERVDGVSSNSPISSSLSMEAMQEPP---- 184

Query: 186 ELFLGEY--EDVFYCMQQQHGNYSQGMEWLNLYM 217
             FLGE+  ED FY  +    +Y  GMEW+NLYM
Sbjct: 185 --FLGEFGVEDAFYIPE---NSYIHGMEWMNLYM 203

BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A1J7GKB0|A0A1J7GKB0_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_12990 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50
Identity = 118/214 (55.14%), Postives = 153/214 (71.50%), Query Frame = 0

Query: 6   DDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRXXXXXXAKEATGAAGLKKRKLSTEQV 65
           +D  +L S LYS G +TQI+PQQG  E  KP +R        E+      KKRKLS EQV
Sbjct: 7   EDHIMLTSQLYSAGPYTQIVPQQG--EYKKPRRRRNKKCRGGESGALDAHKKRKLSDEQV 66

Query: 66  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 125
            +LE +FG+EHKLESERKD+LA ELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAH+
Sbjct: 67  NMLEQSFGNEHKLESERKDKLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHE 126

Query: 126 SILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTS---SETMDAVPPPVPS 185
           +  L+   LE+E+ KL EQL EA+ EIQ +++ ++++ SNSP+S   S++M+AV  P P 
Sbjct: 127 ATTLEKCLLETEVLKLKEQLSEAEKEIQ-ILKHTDRVSSNSPSSSQQSQSMEAVVDP-PF 186

Query: 186 WGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           +GE  +  Y+D  + + + H  Y  GMEW+NLY+
Sbjct: 187 FGEFQVDGYDDDVFYVPETH--YINGMEWINLYI 214

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023003086.16.6e-10490.74homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima][more]
XP_023518445.11.8e-10191.67homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo][more]
XP_022963111.19.0e-10191.67homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata][more]
XP_004143500.13.3e-6368.37PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1... [more]
XP_008441120.14.8e-6268.87PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT4G36740.11.0e-4549.54homeobox protein 40[more]
AT2G18550.15.1e-4248.65homeobox protein 21[more]
AT5G66700.13.7e-3250.31homeobox 53[more]
AT2G22430.11.4e-1868.06homeobox protein 6[more]
AT4G40060.12.3e-1870.97homeobox protein 16[more]
Match NameE-valueIdentityDescription
sp|O23208|ATB40_ARATH1.8e-4449.54Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-... [more]
sp|Q9ZU70|ATB21_ARATH9.3e-4148.65Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-... [more]
sp|Q9LVR0|ATB53_ARATH6.7e-3150.31Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-... [more]
sp|Q7XI85|HOX14_ORYSJ1.9e-2543.93Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
sp|A2YN17|HOX14_ORYSI2.3e-2361.29Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KGE8|A0A0A0KGE8_CUCSA2.2e-6368.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1[more]
tr|A0A1S3B2Q4|A0A1S3B2Q4_CUCME3.2e-6268.87homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 ... [more]
tr|A0A199UBK8|A0A199UBK8_MANES7.3e-5158.49Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S025300 PE=4 SV=1[more]
tr|A0A1R3GFL1|A0A1R3GFL1_COCAP4.8e-5061.68Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_26215 PE=4 ... [more]
tr|A0A1J7GKB0|A0A1J7GKB0_LUPAN4.8e-5055.14Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_12990 PE=4 S... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
IPR001356Homeobox_dom
IPR000047HTH_motif
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16034-RACarg16034-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..158
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 53..119
e-value: 5.8E-19
score: 69.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..56
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 4..215
NoneNo IPR availablePANTHERPTHR24326:SF281HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATEDcoord: 4..215
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 82..91
score: 46.12
coord: 91..107
score: 58.71
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 54..115
e-value: 3.1E-18
score: 76.6
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 57..110
e-value: 1.1E-16
score: 60.2
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 51..111
score: 16.568
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 56..112
e-value: 9.04025E-16
score: 67.6536
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 86..109
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 56..120

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg16034Carg14172Silver-seed gourdcarcarB602