Carg16034 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CACTTCACATACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTACTGAAGAACTCTACCGCCGGTGATAATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTCCTTATCTCCATCCTTTATTAGTTTCTTCTTCGTGGTATTGGAGCTTTTTCAAAAATCATGTTTTTTTTTTTTTTTTTTTTTTCAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGGTAAAAATATATATTTTTTTTCAATTGATTTGAAAGTAGACGAAACGACTCTCCACAATGGTATGATATTGTCCATTTTAGTATAAAGTCTCACGGTTTTGCTTTAGGCTTCTCCAAGATGCCTCGTACCAATGGAGATAGTATTATTTGATTATAAACTCATGAACATTCCCTAAATTAGTAGATGTGGGACTTTCATCATCTAACCCTTCGTATTTTATGTGTTAAATGTTTTCTTTGATTTTAATGTATACCGATTAATGGGTTATTTTTAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA CACTTCACATACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTACTGAAGAACTCTACCGCCGGTGATAATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA ATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
BLAST of Carg16034 vs. NCBI nr
Match: XP_023003086.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima]) HSP 1 Score: 386.3 bits (991), Expect = 6.6e-104 Identity = 196/216 (90.74%), Postives = 199/216 (92.13%), Query Frame = 0
BLAST of Carg16034 vs. NCBI nr
Match: XP_023518445.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101 Identity = 198/216 (91.67%), Postives = 201/216 (93.06%), Query Frame = 0
BLAST of Carg16034 vs. NCBI nr
Match: XP_022963111.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata]) HSP 1 Score: 375.9 bits (964), Expect = 9.0e-101 Identity = 198/216 (91.67%), Postives = 202/216 (93.52%), Query Frame = 0
BLAST of Carg16034 vs. NCBI nr
Match: XP_004143500.1 (PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1 hypothetical protein Csa_6G501990 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 3.3e-63 Identity = 147/215 (68.37%), Postives = 169/215 (78.60%), Query Frame = 0
BLAST of Carg16034 vs. NCBI nr
Match: XP_008441120.1 (PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo]) HSP 1 Score: 247.3 bits (630), Expect = 4.8e-62 Identity = 146/212 (68.87%), Postives = 166/212 (78.30%), Query Frame = 0
BLAST of Carg16034 vs. TAIR10
Match: AT4G36740.1 (homeobox protein 40) HSP 1 Score: 180.6 bits (457), Expect = 1.0e-45 Identity = 107/216 (49.54%), Postives = 143/216 (66.20%), Query Frame = 0
BLAST of Carg16034 vs. TAIR10
Match: AT2G18550.1 (homeobox protein 21) HSP 1 Score: 168.3 bits (425), Expect = 5.1e-42 Identity = 108/222 (48.65%), Postives = 144/222 (64.86%), Query Frame = 0
BLAST of Carg16034 vs. TAIR10
Match: AT5G66700.1 (homeobox 53) HSP 1 Score: 135.6 bits (340), Expect = 3.7e-32 Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 0
BLAST of Carg16034 vs. TAIR10
Match: AT2G22430.1 (homeobox protein 6) HSP 1 Score: 90.5 bits (223), Expect = 1.4e-18 Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 0
BLAST of Carg16034 vs. TAIR10
Match: AT4G40060.1 (homeobox protein 16) HSP 1 Score: 89.7 bits (221), Expect = 2.3e-18 Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of Carg16034 vs. Swiss-Prot
Match: sp|O23208|ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3) HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44 Identity = 107/216 (49.54%), Postives = 143/216 (66.20%), Query Frame = 0
BLAST of Carg16034 vs. Swiss-Prot
Match: sp|Q9ZU70|ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 9.3e-41 Identity = 108/222 (48.65%), Postives = 144/222 (64.86%), Query Frame = 0
BLAST of Carg16034 vs. Swiss-Prot
Match: sp|Q9LVR0|ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 6.7e-31 Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 0
BLAST of Carg16034 vs. Swiss-Prot
Match: sp|Q7XI85|HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25 Identity = 76/173 (43.93%), Postives = 107/173 (61.85%), Query Frame = 0
BLAST of Carg16034 vs. Swiss-Prot
Match: sp|A2YN17|HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.3e-23 Identity = 57/93 (61.29%), Postives = 75/93 (80.65%), Query Frame = 0
BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A0A0KGE8|A0A0A0KGE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.2e-63 Identity = 147/215 (68.37%), Postives = 169/215 (78.60%), Query Frame = 0
BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A1S3B2Q4|A0A1S3B2Q4_CUCME (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 3.2e-62 Identity = 146/212 (68.87%), Postives = 166/212 (78.30%), Query Frame = 0
BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A199UBK8|A0A199UBK8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S025300 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 7.3e-51 Identity = 124/212 (58.49%), Postives = 148/212 (69.81%), Query Frame = 0
BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A1R3GFL1|A0A1R3GFL1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_26215 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50 Identity = 132/214 (61.68%), Postives = 151/214 (70.56%), Query Frame = 0
BLAST of Carg16034 vs. TrEMBL
Match: tr|A0A1J7GKB0|A0A1J7GKB0_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_12990 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50 Identity = 118/214 (55.14%), Postives = 153/214 (71.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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