CsaV3_6G046050 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G046050
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Homeobox-leucine zipper protein like
Location	chr6 : 27254198 .. 27256020 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCATTTCCAAGTGAAAAAATGAAATAATTAATTGGGAAGACACTAACAGGCCTCACAAAGGATAAAAGCGGGCACAAATGTGATTATACAAAAAATTGGAGGCACTTCTGCTAAAGTAGTAAAATAAATTCTTCCCATATTCCGAAATTCCGAATATATTTCATTTTATTCCCTCTATAAATAAGTTGCAACGCAATTCCCGTGTAAACCATCCCCCCAAACTTCTCTCAAACCTATCCACATACCAAAACTCATAAACAATCAAACAAATAACGAAAAAAATCCACCGCCGGTGACAATGGCCGCCGTGAATCTCCGACCGGACGCCGACAACTCATTACTCGTTTCCCATCTCTACAACCCTGAAGTTTACACCCAACAAGTGTTACCCCAACAAGGTAAATAATTAATTTTCTTACAAAATTTCATCTCGAAGTATACTTTATTTTTAATTTTCAAATTTATGTTTTTAGGTACGGGAGAGGGAAGTAAGCCGACGAAGCGACGGAGGAGGAGGAGCAAAGCGAAGGAGGGAGGCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATGAATTTTGGGAATGAACATAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGGCAGGTGGCGGTTTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTTAAAAAAGCTCATGATTCTGTTGTTCTACAAAAATCCCATCTTGAATCTGAGGTCAGTTTTATTATAAATTTTTCTTTTTCTTTCTTTTAATTTGGCATATTAATGATTTTTTCTCCAAAAATTACGTACGGTCAGAGAGTTATAATTTGTTTGACCTTATCGTTAATTTTGTAGTACTAAAAATAAAACTGGATTTTGATTTGCTTATCTAGTAAGAAATGAACGAAATTTGGTAAACAAAATAACAATGTTTTTTTATTTTTTAAAATAAAAATTTGAAAGGAATAAAAAAGAAGAACGTGCATGAGCTCTTGGCTCGAAGAATATGATGCCACCTTATAGGGTTTGGAATTTGTAAAATAATAAATAATATAAAAAAATCAATTTCTTCCCTAAAAAAACTCAGAAACTTTTCTTTTTCTTTTTCTTTTTTTTCCATTAACGTACAGCTTACTGCCATCTGAGGCAAATATAAATGGGATAACAACCTCTCTCTTCTCTCTTTAGACAATGATCCGTACACCATCTTAATATATATATCTATTTATAACTCTATAACAGTTCTTATAATAATTTGTTTAAATCTAATTAATTGTTTTGTTTGGTTTGATTTAGTTGATGAAAGTGAAAGAGCAGTTGAAAGAAGCAAAGAATGAGATACGAAAAATGGTAGAAGGAAGTGAGGTGAGAAATAATTCAAGCAATAGTCCAAGCTCTTCAGTGACGATGGAAGCAGTTGAGGAAGCAGCAGTAGTTCCTTTGGGGGAGCTTTTTTTTGAAGAATATGAAGATGTATTCTATTGCATGCAAGACAACAATTACAATCAAGGATTGAACTGGGCGCTTAATCTTAATTTTATGTAGATTAATTATATTTATTATATCTAATTAATCACTCTCTTTTAATTTTAGTTTGTGGATATAGAACCCTCATAGATTATATTAGATCATCTCTAGCTTAATATGTACATTTCTCTCTCTCCCTCTCTCTAACTAGTGTTATTTTTCAGAACTTGGAATTAATTAATATATATAATTAATTGTGTTATTAATTATATGTCTCTTTTTAGTCTC

mRNA sequence

ATGGCCGCCGTGAATCTCCGACCGGACGCCGACAACTCATTACTCGTTTCCCATCTCTACAACCCTGAAGTTTACACCCAACAAGTGTTACCCCAACAAGGTACGGGAGAGGGAAGTAAGCCGACGAAGCGACGGAGGAGGAGGAGCAAAGCGAAGGAGGGAGGCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATGAATTTTGGGAATGAACATAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGGCAGGTGGCGGTTTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTTAAAAAAGCTCATGATTCTGTTGTTCTACAAAAATCCCATCTTGAATCTGAGTTGATGAAAGTGAAAGAGCAGTTGAAAGAAGCAAAGAATGAGATACGAAAAATGGTAGAAGGAAGTGAGGTGAGAAATAATTCAAGCAATAGTCCAAGCTCTTCAGTGACGATGGAAGCAGTTGAGGAAGCAGCAGTAGTTCCTTTGGGGGAGCTTTTTTTTGAAGAATATGAAGATGTATTCTATTGCATGCAAGACAACAATTACAATCAAGGATTGAACTGGGCGCTTAATCTTAATTTTATGTAG

Coding sequence (CDS)

ATGGCCGCCGTGAATCTCCGACCGGACGCCGACAACTCATTACTCGTTTCCCATCTCTACAACCCTGAAGTTTACACCCAACAAGTGTTACCCCAACAAGGTACGGGAGAGGGAAGTAAGCCGACGAAGCGACGGAGGAGGAGGAGCAAAGCGAAGGAGGGAGGCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTTCAGAGCAAGTGAAGCTTTTGGAGATGAATTTTGGGAATGAACATAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGGCAGGTGGCGGTTTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTTAAAAAAGCTCATGATTCTGTTGTTCTACAAAAATCCCATCTTGAATCTGAGTTGATGAAAGTGAAAGAGCAGTTGAAAGAAGCAAAGAATGAGATACGAAAAATGGTAGAAGGAAGTGAGGTGAGAAATAATTCAAGCAATAGTCCAAGCTCTTCAGTGACGATGGAAGCAGTTGAGGAAGCAGCAGTAGTTCCTTTGGGGGAGCTTTTTTTTGAAGAATATGAAGATGTATTCTATTGCATGCAAGACAACAATTACAATCAAGGATTGAACTGGGCGCTTAATCTTAATTTTATGTAG

Protein sequence

MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGGGAAGLKKRKLSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM

Homology

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BLAST of CsaV3_6G046050 vs. NCBI nr
Match: XP_004143500.1 (PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1 hypothetical protein Csa_6G501990 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 5.8e-103
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXX 60
           MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 120
           XXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE
Sbjct: 61  XXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 120

Query: 121 EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM 180
           EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM
Sbjct: 121 EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM 180

Query: 181 EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 225
           EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM
Sbjct: 181 EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 224

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BLAST of CsaV3_6G046050 vs. NCBI nr
Match: XP_008441120.1 (PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 5.7e-90
Identity = 206/214 (96.26%), Postives = 210/214 (98.13%), Query Frame = 0


Query: 12  NSLLVSHLYNPEVYTQQVLPQQGTGEGSKP-TXXXXXXXXXXXXXXXXXXXXXXXSSEQV 71
           NSLL SHLYNPEVYT QVLPQQGTGEG+KP  XXXXXXXXXXXXXXXXXXXXXXXSSEQV
Sbjct: 13  NSLLSSHLYNPEVYT-QVLPQQGTGEGNKPXXXXXXXXXXXXXXXXXXXXXXXXXSSEQV 72

Query: 72  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 131
           KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD
Sbjct: 73  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 132

Query: 132 SVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 191
           SV+LQKSHLESEL+KVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP
Sbjct: 133 SVLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 192

Query: 192 LGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 225
           LGELFFEEYEDVFYCMQDNNYNQGL+WALNLNFM
Sbjct: 193 LGELFFEEYEDVFYCMQDNNYNQGLDWALNLNFM 225

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BLAST of CsaV3_6G046050 vs. NCBI nr
Match: XP_023518445.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 3.5e-63
Identity = 160/215 (74.42%), Postives = 180/215 (83.72%), Query Frame = 0


Query: 9   DADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXXXXSSE 68
           D DN+LL+S+LY+P VYT Q+LPQQG  EG+KPTXXXXXXXXXXXXXXXXXX     S+E
Sbjct: 5   DDDNTLLISNLYSPGVYT-QILPQQGAAEGNKPTXXXXXXXXXXXXXXXXXXKKRKLSTE 64

Query: 69  QVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 128
           QVKLLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA
Sbjct: 65  QVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 124

Query: 129 HDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAV 188
           HDS++LQ SHLE E+ K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+AV   A 
Sbjct: 125 HDSIILQNSHLEYEMTKLSEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDAVPPPA- 184

Query: 189 VPLGELFFEEYEDVFYCMQD--NNYNQGLNWALNL 222
              GELF  EYEDVFYCMQ    NY+QG+ W LNL
Sbjct: 185 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 214

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BLAST of CsaV3_6G046050 vs. NCBI nr
Match: XP_023544855.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 7.7e-63
Identity = 150/221 (67.87%), Postives = 172/221 (77.83%), Query Frame = 0


Query: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPT-XXXXXXXXXXXXXXXXX 60
           MAAVNLRPD DNS L+SH+YNPE+YT Q+LPQQG  EG+KPT  XXXXXXXXX       
Sbjct: 1   MAAVNLRPDDDNSTLISHIYNPEIYT-QMLPQQGMAEGNKPTKRXXXXXXXXXVAEAAAG 60

Query: 61  XXXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLE 120
                 SSEQVKLLE+NFGNEHKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+KLE
Sbjct: 61  LKKRKLSSEQVKLLEINFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLE 120

Query: 121 EEYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVT 180
            +YS LK AHDS VLQK+HL+SE+ K+KEQL EAKNEI+K+VE SE RN        SVT
Sbjct: 121 HQYSILKTAHDSAVLQKTHLQSEIEKLKEQLAEAKNEIQKLVEVSE-RNR-----RWSVT 180

Query: 181 MEAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALN 221
           M+ V+ AA    GE+  EEYEDVFY MQ+NNYNQ + W LN
Sbjct: 181 MDDVQAAAC--WGEILMEEYEDVFYSMQENNYNQPVEWYLN 212

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BLAST of CsaV3_6G046050 vs. NCBI nr
Match: XP_023003086.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 3.2e-61
Identity = 139/213 (65.26%), Postives = 160/213 (75.12%), Query Frame = 0


Query: 11  DNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXXXXSSEQV 70
           DN+LL+S+LY+P VYT Q+L QQG  EG+KP                        S+EQV
Sbjct: 7   DNTLLISNLYSPGVYT-QILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKLSTEQV 66

Query: 71  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 130
           KLLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD
Sbjct: 67  KLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 126

Query: 131 SVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 190
           S++LQ SHLESE++K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+ V   A   
Sbjct: 127 SILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDTVPPLA-PS 186

Query: 191 LGELFFEEYEDVFYCMQD--NNYNQGLNWALNL 222
            GELF  EYEDVFYCMQ    NY+QG+ W LNL
Sbjct: 187 WGELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 214

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BLAST of CsaV3_6G046050 vs. TAIR10
Match: AT4G36740.1 (homeobox protein 40)

HSP 1 Score: 162.5 bits (410), Expect = 2.9e-40
Identity = 103/217 (47.47%), Postives = 137/217 (63.13%), Query Frame = 0


Query: 4   VNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXX 63
           +N   D  N   +S LY P+VYTQ V P  G  +  K                       
Sbjct: 1   MNYTVDDQNMAFISQLY-PDVYTQIVQP--GEVKQPKRRRKKTKGSVASADGGNGLFRKR 60

Query: 64  XXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 123
             + EQV +LEM+FG+EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+
Sbjct: 61  KLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYN 120

Query: 124 TLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSP-SSSVTMEA 183
            LK +HD+VV+ K  LESE++++KEQL +A+ EI+++ E   V   SSNSP SSSV++EA
Sbjct: 121 KLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAE--RVEGGSSNSPISSSVSVEA 180

Query: 184 VEEA--AVVPLGELFFEEYEDVFYCMQDNNYNQGLNW 218
            E        +G+   ++Y+ +FY + +N+Y     W
Sbjct: 181 NETPFFGDYKVGD-DGDDYDHLFYPVPENSYIDEAEW 211

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BLAST of CsaV3_6G046050 vs. TAIR10
Match: AT2G18550.1 (homeobox protein 21)

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-36
Identity = 119/226 (52.65%), Postives = 151/226 (66.81%), Query Frame = 0


Query: 5   NLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPT------XXXXXXXXXXXXXXXX 64
           N   D  N LL+S LY P VYT  ++PQQG GE +KPT      XXXXXXXXXXXXXX  
Sbjct: 3   NQNVDDHNLLLISQLY-PNVYT-PLVPQQG-GE-AKPTRXXXXXXXXXXXXXXXXXXXNG 62

Query: 65  XXXXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL 124
                  S EQV++LE++F ++HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++
Sbjct: 63  WFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRV 122

Query: 125 EEEYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSP-SSS 184
           E+EY+ LK A+++ V++K  L+SE++ +KEQL EA+ EI+++ +   V    SNSP SSS
Sbjct: 123 EDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAK--RVEGTLSNSPISSS 182

Query: 185 VTMEAVEEAAVVPLGELFFEEYEDVFYCMQDNN------YNQGLNW 218
           VT+EA            FF +Y+  F    D N      Y  GL+W
Sbjct: 183 VTIEANHTTP-------FFGDYDIGFDGEADENLLYSPDYIDGLDW 215

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BLAST of CsaV3_6G046050 vs. TAIR10
Match: AT5G66700.1 (homeobox 53)

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-30
Identity = 79/153 (51.63%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 66  SSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 125
           + EQV +LE +FGNEHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKKLEEEY+ L
Sbjct: 76  TDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKL 135

Query: 126 KKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEE 185
           K  HD+VVL +  LES+++K+ EQL EA                +S+S S SV      E
Sbjct: 136 KNHHDNVVLGQCQLESQILKLTEQLSEAXXXXXXXXXXXXXXPTNSSSSSLSV------E 195

Query: 186 AAVVPLG-ELFFEEYEDVFYCMQDNNYNQGLNW 218
           A   P   EL  E   ++ + M DNNY Q + +
Sbjct: 196 ANNAPTDFELAPETNYNIPFYMLDNNYLQSMEY 222

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BLAST of CsaV3_6G046050 vs. TAIR10
Match: AT2G22430.1 (homeobox protein 6)

HSP 1 Score: 82.4 bits (202), Expect = 3.9e-16
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 66  SSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 123
           S  QVK LE NF  E+KLE ERK +LA ELGL PRQVAVWFQNRRARWK K+LE++Y
Sbjct: 67  SINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDY 123

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BLAST of CsaV3_6G046050 vs. TAIR10
Match: AT5G03790.1 (homeobox 51)

HSP 1 Score: 82.4 bits (202), Expect = 3.9e-16
Identity = 45/102 (44.12%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 66  SSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 125
           +S Q+  LE +F  E KL+S+RK +L+ ELGL PRQ+AVWFQNRRARWK K+LE+ Y +L
Sbjct: 82  TSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSL 141

Query: 126 KKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVR 168
           ++ +D V  +K  L  E+ K++  L++ +  I+K +    ++
Sbjct: 142 RQEYDVVSREKQMLHDEVKKLRALLRD-QGLIKKQISAGTIK 182

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BLAST of CsaV3_6G046050 vs. Swiss-Prot
Match: sp|O23208|ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 162.5 bits (410), Expect = 5.3e-39
Identity = 103/217 (47.47%), Postives = 137/217 (63.13%), Query Frame = 0


Query: 4   VNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXX 63
           +N   D  N   +S LY P+VYTQ V P  G  +  K                       
Sbjct: 1   MNYTVDDQNMAFISQLY-PDVYTQIVQP--GEVKQPKRRRKKTKGSVASADGGNGLFRKR 60

Query: 64  XXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 123
             + EQV +LEM+FG+EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+
Sbjct: 61  KLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYN 120

Query: 124 TLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSP-SSSVTMEA 183
            LK +HD+VV+ K  LESE++++KEQL +A+ EI+++ E   V   SSNSP SSSV++EA
Sbjct: 121 KLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAE--RVEGGSSNSPISSSVSVEA 180

Query: 184 VEEA--AVVPLGELFFEEYEDVFYCMQDNNYNQGLNW 218
            E        +G+   ++Y+ +FY + +N+Y     W
Sbjct: 181 NETPFFGDYKVGD-DGDDYDHLFYPVPENSYIDEAEW 211

[Close]

BLAST of CsaV3_6G046050 vs. Swiss-Prot
Match: sp|Q9ZU70|ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-35
Identity = 119/226 (52.65%), Postives = 151/226 (66.81%), Query Frame = 0


Query: 5   NLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPT------XXXXXXXXXXXXXXXX 64
           N   D  N LL+S LY P VYT  ++PQQG GE +KPT      XXXXXXXXXXXXXX  
Sbjct: 3   NQNVDDHNLLLISQLY-PNVYT-PLVPQQG-GE-AKPTRXXXXXXXXXXXXXXXXXXXNG 62

Query: 65  XXXXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKL 124
                  S EQV++LE++F ++HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++
Sbjct: 63  WFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRV 122

Query: 125 EEEYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSP-SSS 184
           E+EY+ LK A+++ V++K  L+SE++ +KEQL EA+ EI+++ +   V    SNSP SSS
Sbjct: 123 EDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAK--RVEGTLSNSPISSS 182

Query: 185 VTMEAVEEAAVVPLGELFFEEYEDVFYCMQDNN------YNQGLNW 218
           VT+EA            FF +Y+  F    D N      Y  GL+W
Sbjct: 183 VTIEANHTTP-------FFGDYDIGFDGEADENLLYSPDYIDGLDW 215

[Close]

BLAST of CsaV3_6G046050 vs. Swiss-Prot
Match: sp|Q9LVR0|ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.0e-29
Identity = 79/153 (51.63%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 66  SSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 125
           + EQV +LE +FGNEHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKKLEEEY+ L
Sbjct: 76  TDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKL 135

Query: 126 KKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEE 185
           K  HD+VVL +  LES+++K+ EQL EA                +S+S S SV      E
Sbjct: 136 KNHHDNVVLGQCQLESQILKLTEQLSEAXXXXXXXXXXXXXXPTNSSSSSLSV------E 195

Query: 186 AAVVPLG-ELFFEEYEDVFYCMQDNNYNQGLNW 218
           A   P   EL  E   ++ + M DNNY Q + +
Sbjct: 196 ANNAPTDFELAPETNYNIPFYMLDNNYLQSMEY 222

[Close]

BLAST of CsaV3_6G046050 vs. Swiss-Prot
Match: sp|A2YN17|HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-24
Identity = 57/93 (61.29%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 68  EQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 127
           EQV++LE++F  E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK 
Sbjct: 69  EQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKH 128

Query: 128 AHDSVVLQKSHLESELMKVKEQLKEAKNEIRKM 161
           AHD+ +L K HLE+E++++KE+L  A+ E+R++
Sbjct: 129 AHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161

[Close]

BLAST of CsaV3_6G046050 vs. Swiss-Prot
Match: sp|Q7XI85|HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.3e-24
Identity = 57/93 (61.29%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 68  EQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK 127
           EQV++LE++F  E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK 
Sbjct: 69  EQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKH 128

Query: 128 AHDSVVLQKSHLESELMKVKEQLKEAKNEIRKM 161
           AHD+ +L K HLE+E++++KE+L  A+ E+R++
Sbjct: 129 AHDAAILHKCHLENEVLRLKERLVVAEEEVRRL 161

[Close]

BLAST of CsaV3_6G046050 vs. TrEMBL
Match: tr|A0A0A0KGE8|A0A0A0KGE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.9e-103
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXX 60
           MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAAVNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 120
           XXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE
Sbjct: 61  XXXXXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 120

Query: 121 EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM 180
           EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM
Sbjct: 121 EYSTLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTM 180

Query: 181 EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 225
           EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM
Sbjct: 181 EAVEEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 224

[Close]

BLAST of CsaV3_6G046050 vs. TrEMBL
Match: tr|A0A1S3B2Q4|A0A1S3B2Q4_CUCME (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.8e-90
Identity = 206/214 (96.26%), Postives = 210/214 (98.13%), Query Frame = 0


Query: 12  NSLLVSHLYNPEVYTQQVLPQQGTGEGSKP-TXXXXXXXXXXXXXXXXXXXXXXXSSEQV 71
           NSLL SHLYNPEVYT QVLPQQGTGEG+KP  XXXXXXXXXXXXXXXXXXXXXXXSSEQV
Sbjct: 13  NSLLSSHLYNPEVYT-QVLPQQGTGEGNKPXXXXXXXXXXXXXXXXXXXXXXXXXSSEQV 72

Query: 72  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 131
           KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD
Sbjct: 73  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 132

Query: 132 SVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 191
           SV+LQKSHLESEL+KVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP
Sbjct: 133 SVLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 192

Query: 192 LGELFFEEYEDVFYCMQDNNYNQGLNWALNLNFM 225
           LGELFFEEYEDVFYCMQDNNYNQGL+WALNLNFM
Sbjct: 193 LGELFFEEYEDVFYCMQDNNYNQGLDWALNLNFM 225

[Close]

BLAST of CsaV3_6G046050 vs. TrEMBL
Match: tr|A0A2P5BC59|A0A2P5BC59_PARAD (Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_252380 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.3e-45
Identity = 143/208 (68.75%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 11  DNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXXXXSSEQV 70
           D+ +L S LY P VYTQ V PQQG     +  XXXXXXXXXXXXXXXXXXXXXX S+EQV
Sbjct: 11  DHMVLFSQLY-PGVYTQMV-PQQG-----EXXXXXXXXXXXXXXXXXXXXXXXXLSAEQV 70

Query: 71  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 130
            LLE+NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK HD
Sbjct: 71  NLLEINFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKQHD 130

Query: 131 SVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 190
           SVV++K  LESEL+K+KEQL +A+ EI+++ E   V + SSNSPSSS++MEA  +     
Sbjct: 131 SVVVEKCRLESELLKLKEQLSDAEKEIQRLAE--RVDSASSNSPSSSLSMEAAMDPPF-- 190

Query: 191 LGEL-FFEEYEDVFYCMQDNNYNQGLNW 218
           LGE    EEY+DVFY  Q NNY  G+ W
Sbjct: 191 LGEYRVVEEYDDVFYVPQ-NNYINGMEW 206

[Close]

BLAST of CsaV3_6G046050 vs. TrEMBL
Match: tr|W9RLH1|W9RLH1_9ROSA (Homeobox-leucine zipper protein ATHB-40 OS=Morus notabilis OX=981085 GN=L484_009043 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.8e-45
Identity = 139/214 (64.95%), Postives = 167/214 (78.04%), Query Frame = 0


Query: 4   VNLRPDADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXX 63
           +N + D D+  L+S LY P VYTQ V PQQG  +     XXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MNNQIDEDHMALISQLY-PGVYTQMV-PQQGEAK----XXXXXXXXXXXXXXXXXXXXXX 60

Query: 64  XXSSEQVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 123
           XX  EQV LLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS
Sbjct: 61  XXXXEQVNLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120

Query: 124 TLKKAHDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAV 183
           TLKK HD+VV++K  LESE++++KEQ+ +AK EI+++ E +E    SSNSPSSS+++EAV
Sbjct: 121 TLKKMHDNVVVEKCRLESEVLQLKEQIMDAKKEIQRLAERAE--GVSSNSPSSSLSVEAV 180

Query: 184 EEAAVVPLGELFFEEYEDVFYCMQDNNYNQGLNW 218
           E   +   G +  E Y+++FY   +NNY  G+ W
Sbjct: 181 EPPFLGEFG-VVSEGYDNMFYA-AENNYIHGMEW 204

[Close]

BLAST of CsaV3_6G046050 vs. TrEMBL
Match: tr|A0A2P5FXR9|A0A2P5FXR9_9ROSA (Octamer-binding transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_015720 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.8e-45
Identity = 142/208 (68.27%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 11  DNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTXXXXXXXXXXXXXXXXXXXXXXXSSEQV 70
           D+ +L S LY P VY+Q V PQQG     +  XXXXXXXXXXXXXXXXXXXXXX S+EQV
Sbjct: 11  DHMVLFSQLY-PGVYSQMV-PQQG-----EXXXXXXXXXXXXXXXXXXXXXXXXLSAEQV 70

Query: 71  KLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHD 130
            LLE+NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKK HD
Sbjct: 71  NLLEINFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKQHD 130

Query: 131 SVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVP 190
           SVV++K  LESEL+K+KEQL +A+ EI+++ E   V + SSNSPSSS++MEA  +     
Sbjct: 131 SVVVEKCRLESELLKLKEQLSDAEKEIQRLAE--RVDSASSNSPSSSLSMEAAMDPPF-- 190

Query: 191 LGEL-FFEEYEDVFYCMQDNNYNQGLNW 218
           LGE    EEY+DVFY  Q NNY  G+ W
Sbjct: 191 LGEYRVVEEYDDVFYVPQ-NNYIYGMEW 206

The following BLAST results are available for this feature:

BLAST of CsaV3_6G046050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143500.1	5.8e-103	100.00	PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis sativus] >KGN48810.1...	[more]
XP_008441120.1	5.7e-90	96.26	PREDICTED: homeobox-leucine zipper protein ATHB-40, partial [Cucumis melo]	[more]
XP_023518445.1	3.5e-63	74.42	homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]	[more]
XP_023544855.1	7.7e-63	67.87	homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003086.1	3.2e-61	65.26	homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima]	[more]

BLAST of CsaV3_6G046050 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36740.1	2.9e-40	47.47	homeobox protein 40	[more]
AT2G18550.1	2.0e-36	52.65	homeobox protein 21	[more]
AT5G66700.1	2.8e-30	51.63	homeobox 53	[more]
AT2G22430.1	3.9e-16	71.93	homeobox protein 6	[more]
AT5G03790.1	3.9e-16	44.12	homeobox 51	[more]

BLAST of CsaV3_6G046050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23208\|ATB40_ARATH	5.3e-39	47.47	Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
sp\|Q9ZU70\|ATB21_ARATH	3.6e-35	52.65	Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
sp\|Q9LVR0\|ATB53_ARATH	5.0e-29	51.63	Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
sp\|A2YN17\|HOX14_ORYSI	6.3e-24	61.29	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
sp\|Q7XI85\|HOX14_ORYSJ	6.3e-24	61.29	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CsaV3_6G046050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGE8\|A0A0A0KGE8_CUCSA	3.9e-103	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1	[more]
tr\|A0A1S3B2Q4\|A0A1S3B2Q4_CUCME	3.8e-90	96.26	homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 ...	[more]
tr\|A0A2P5BC59\|A0A2P5BC59_PARAD	1.3e-45	68.75	Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01...	[more]
tr\|W9RLH1\|W9RLH1_9ROSA	4.8e-45	64.95	Homeobox-leucine zipper protein ATHB-40 OS=Morus notabilis OX=981085 GN=L484_009...	[more]
tr\|A0A2P5FXR9\|A0A2P5FXR9_9ROSA	4.8e-45	68.27	Octamer-binding transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS
IPR001356	Homeobox_dom
IPR000047	HTH_motif

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G046050.1	CsaV3_6G046050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..167
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 59..125 e-value: 2.9E-19 score: 70.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..64
None	No IPR available	PANTHER	PTHR24326:SF281	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED	coord: 9..218
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 9..218
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 96..112 score: 58.71 coord: 87..96 score: 46.12
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 59..120 e-value: 2.5E-18 score: 76.9
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 62..115 e-value: 5.2E-17 score: 61.3
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 56..116 score: 16.649
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 61..117 e-value: 1.23683E-15 score: 67.6536
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 91..114
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 61..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G046050	CSPI06G30800	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G046050	Cucsa.104950	Cucumber (Gy14) v1	cgycucB126
CsaV3_6G046050	CmaCh07G005040	Cucurbita maxima (Rimu)	cmacucB1035
CsaV3_6G046050	CmaCh03G007690	Cucurbita maxima (Rimu)	cmacucB0809
CsaV3_6G046050	CmoCh03G007980	Cucurbita moschata (Rifu)	cmocucB0793
CsaV3_6G046050	Cp4.1LG10g00850	Cucurbita pepo (Zucchini)	cpecucB0092
CsaV3_6G046050	Cp4.1LG19g09540	Cucurbita pepo (Zucchini)	cpecucB0618
CsaV3_6G046050	CsGy6G030330	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G046050	Carg16034	Silver-seed gourd	carcucB0797
CsaV3_6G046050	Cla014193	Watermelon (97103) v1	cucwmB526
CsaV3_6G046050	MELO3C007809	Melon (DHL92) v3.5.1	cucmeB517
CsaV3_6G046050	ClCG01G019340	Watermelon (Charleston Gray)	cucwcgB455
CsaV3_6G046050	Lsi01G006990	Bottle gourd (USVL1VR-Ls)	cuclsiB462
CsaV3_6G046050	MELO3C007809.2	Melon (DHL92) v3.6.1	cucmedB505
CsaV3_6G046050	Cla97C01G018750	Watermelon (97103) v2	cucwmbB430
CsaV3_6G046050	Bhi03G000982	Wax gourd	cucwgoB641

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G046050	Cucurbita moschata (Rifu)	cmocucB1019
CsaV3_6G046050	Cucurbita pepo (Zucchini)	cpecucB0580
CsaV3_6G046050	Bottle gourd (USVL1VR-Ls)	cuclsiB499
CsaV3_6G046050	Silver-seed gourd	carcucB0442