CmaCh07G002470 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAACCTCTACCCTTTATAGAACGTAACCTGGTAGCTTCCTAACAAATGGCTGCAGGTGGAAGGCTTATAAGTTGAGAAGCTGATCAACTTTGAACAGATTTTGGGAGTGAATTTGATTATGCAGTCTTCAAAAACCAGAAACCCTGCTCCTTTTCTGTCAAAGACTTATGATCTGTTAGAAGAGGCTGGAAGCTTCCATTTAAAAGCAGCAGATCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAAATAGGATTGTGTCCTGGAATGCAGAGGGAAATGGGTTCATAGTTTGGTCTCCTGCGGAATTCTCTGAGGTGTTGTTGCCTAAGTACTTCAAGCATAATAATTTCTCTAGCTTCATTCGCCAGCTTAATACTTACGTATGTATTCTCTCTTTCTCTATCTTTTTGAAAATGCCCCCACCACTTTTTATTCTCTGAAACATCTTGAAGAAGAATTATTCATTATAATGAGGATCCAATTGACCACTTTCCTGATTCGAATGCTTAAATTCTGCCATAGAAATTGGATCTAATAGGTAATATGTTATCTATTTGATGTGTTCCTTATGCTCCCTCTCACATAGGTTTGGGCATGAGTACCCATGGATATTAAATGAAAAAGGAAATGAGATTTTTGATAGGTTATGATATATTAGAGTCGAGTTTCAATCTAATTATTGTAATAATGGAAACAGGGGTTCAAGAAGACGTCGCAAAAGAGGTGGGAATTCAAGCATGAGAAGTTTCAGAGGGGAAACAAGCAGATGCTGGGGGAGATTTTACGTAAGAAATGTGAGCCTAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGATCTGAAACAATGGCGGTTGGTCAGAAGAATGGCGACCATCTGCAACTAATGGAAGAGAACAAGAATCTAAGAAGACGGAAGCTGGAATTGCAAGCTCGAATAGTCCGATTCAAAGCACTTCATATTAGATTACTGGACTGTCTAGATCAGTGCATTAAGAAGTAGCCTACAGAGTTTTGCTAATTAGAAAATTGGGTTGGTTGTGAAAATTTGAGGAAGAAAGTAATACTTCCGGGTTATGCATTTGCTCCAAATTGAGTTTCCATTGTCCACTCTAATTAGTTCTAGGGAAGTTGCTATCTGTAAGAGTTGATATGAACAATGAACAATTAACAAAACAGTTTATACTGGTTTATAAACTAA GAAACCTCTACCCTTTATAGAACGTAACCTGGTAGCTTCCTAACAAATGGCTGCAGGTGGAAGGCTTATAAGTTGAGAAGCTGATCAACTTTGAACAGATTTTGGGAGTGAATTTGATTATGCAGTCTTCAAAAACCAGAAACCCTGCTCCTTTTCTGTCAAAGACTTATGATCTGTTAGAAGAGGCTGGAAGCTTCCATTTAAAAGCAGCAGATCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAAATAGGATTGTGTCCTGGAATGCAGAGGGAAATGGGTTCATAGTTTGGTCTCCTGCGGAATTCTCTGAGGTGTTGTTGCCTAAGTACTTCAAGCATAATAATTTCTCTAGCTTCATTCGCCAGCTTAATACTTACGGGTTCAAGAAGACGTCGCAAAAGAGGTGGGAATTCAAGCATGAGAAGTTTCAGAGGGGAAACAAGCAGATGCTGGGGGAGATTTTACGTAAGAAATGTGAGCCTAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGATCTGAAACAATGGCGGTTGGTCAGAAGAATGGCGACCATCTGCAACTAATGGAAGAGAACAAGAATCTAAGAAGACGGAAGCTGGAATTGCAAGCTCGAATAGTCCGATTCAAAGCACTTCATATTAGATTACTGGACTGTCTAGATCAGTGCATTAAGAAGTAGCCTACAGAGTTTTGCTAATTAGAAAATTGGGTTGGTTGTGAAAATTTGAGGAAGAAAGTAATACTTCCGGGTTATGCATTTGCTCCAAATTGAGTTTCCATTGTCCACTCTAATTAGTTCTAGGGAAGTTGCTATCTGTAAGAGTTGATATGAACAATGAACAATTAACAAAACAGTTTATACTGGTTTATAAACTAA ATGCAGTCTTCAAAAACCAGAAACCCTGCTCCTTTTCTGTCAAAGACTTATGATCTGTTAGAAGAGGCTGGAAGCTTCCATTTAAAAGCAGCAGATCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAAATAGGATTGTGTCCTGGAATGCAGAGGGAAATGGGTTCATAGTTTGGTCTCCTGCGGAATTCTCTGAGGTGTTGTTGCCTAAGTACTTCAAGCATAATAATTTCTCTAGCTTCATTCGCCAGCTTAATACTTACGGGTTCAAGAAGACGTCGCAAAAGAGGTGGGAATTCAAGCATGAGAAGTTTCAGAGGGGAAACAAGCAGATGCTGGGGGAGATTTTACGTAAGAAATGTGAGCCTAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGATCTGAAACAATGGCGGTTGGTCAGAAGAATGGCGACCATCTGCAACTAATGGAAGAGAACAAGAATCTAAGAAGACGGAAGCTGGAATTGCAAGCTCGAATAGTCCGATTCAAAGCACTTCATATTAGATTACTGGACTGTCTAGATCAGTGCATTAAGAAGTAG MQSSKTRNPAPFLSKTYDLLEEAGSFHLKAADQEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEILRKKCEPSVFPAFLRSSHEGSETMAVGQKNGDHLQLMEENKNLRRRKLELQARIVRFKALHIRLLDCLDQCIKK
BLAST of CmaCh07G002470 vs. Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-28 Identity = 71/202 (35.15%), Postives = 110/202 (54.46%), Query Frame = 1
BLAST of CmaCh07G002470 vs. Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26 Identity = 70/163 (42.94%), Postives = 96/163 (58.90%), Query Frame = 1
BLAST of CmaCh07G002470 vs. Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26 Identity = 75/174 (43.10%), Postives = 97/174 (55.75%), Query Frame = 1
BLAST of CmaCh07G002470 vs. Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=1 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 1.9e-26 Identity = 70/166 (42.17%), Postives = 89/166 (53.61%), Query Frame = 1
BLAST of CmaCh07G002470 vs. Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25 Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TrEMBL
Match: A0A0A0KI26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517310 PE=3 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 2.6e-83 Identity = 159/197 (80.71%), Postives = 174/197 (88.32%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TrEMBL
Match: I1J7X9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G143500 PE=3 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.0e-58 Identity = 118/184 (64.13%), Postives = 139/184 (75.54%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TrEMBL
Match: A0A0B2S611_GLYSO (Heat stress transcription factor B-2a OS=Glycine soja GN=glysoja_028764 PE=3 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.0e-58 Identity = 118/184 (64.13%), Postives = 139/184 (75.54%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TrEMBL
Match: M5WVD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011804mg PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.5e-57 Identity = 119/186 (63.98%), Postives = 143/186 (76.88%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TrEMBL
Match: W9RZ03_9ROSA (Heat stress transcription factor B-2a OS=Morus notabilis GN=L484_014528 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 4.2e-57 Identity = 118/189 (62.43%), Postives = 142/189 (75.13%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TAIR10
Match: AT5G62020.1 (AT5G62020.1 heat shock transcription factor B2A) HSP 1 Score: 127.1 bits (318), Expect = 1.1e-29 Identity = 71/202 (35.15%), Postives = 110/202 (54.46%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TAIR10
Match: AT5G16820.1 (AT5G16820.1 heat shock factor 3) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 70/163 (42.94%), Postives = 96/163 (58.90%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TAIR10
Match: AT1G32330.1 (AT1G32330.1 heat shock transcription factor A1D) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 70/166 (42.17%), Postives = 89/166 (53.61%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TAIR10
Match: AT4G17750.1 (AT4G17750.1 heat shock factor 1) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27 Identity = 75/174 (43.10%), Postives = 97/174 (55.75%), Query Frame = 1
BLAST of CmaCh07G002470 vs. TAIR10
Match: AT4G13980.1 (AT4G13980.1 winged-helix DNA-binding transcription factor family protein) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26 Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 1
BLAST of CmaCh07G002470 vs. NCBI nr
Match: gi|659078703|ref|XP_008439862.1| (PREDICTED: heat stress transcription factor B-2a-like [Cucumis melo]) HSP 1 Score: 322.4 bits (825), Expect = 5.3e-85 Identity = 162/198 (81.82%), Postives = 176/198 (88.89%), Query Frame = 1
BLAST of CmaCh07G002470 vs. NCBI nr
Match: gi|778720797|ref|XP_011658207.1| (PREDICTED: heat stress transcription factor B-2a-like [Cucumis sativus]) HSP 1 Score: 316.2 bits (809), Expect = 3.8e-83 Identity = 159/197 (80.71%), Postives = 174/197 (88.32%), Query Frame = 1
BLAST of CmaCh07G002470 vs. NCBI nr
Match: gi|645237175|ref|XP_008225084.1| (PREDICTED: heat stress transcription factor B-2a-like [Prunus mume]) HSP 1 Score: 232.6 bits (592), Expect = 5.5e-58 Identity = 122/187 (65.24%), Postives = 147/187 (78.61%), Query Frame = 1
BLAST of CmaCh07G002470 vs. NCBI nr
Match: gi|356495198|ref|XP_003516466.1| (PREDICTED: heat stress transcription factor B-2a-like [Glycine max]) HSP 1 Score: 232.3 bits (591), Expect = 7.2e-58 Identity = 118/184 (64.13%), Postives = 139/184 (75.54%), Query Frame = 1
BLAST of CmaCh07G002470 vs. NCBI nr
Match: gi|595874379|ref|XP_007212104.1| (hypothetical protein PRUPE_ppa011804mg [Prunus persica]) HSP 1 Score: 230.7 bits (587), Expect = 2.1e-57 Identity = 119/186 (63.98%), Postives = 143/186 (76.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |