Cp4.1LG10g04930 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g04930
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHeat shock transcription factor
LocationCp4.1LG10 : 1152138 .. 1153110 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAACCTGGCAGCTTCCTAGCAAATGGCTGCAGATGCAGGGCTATAAGTACAGAAGCTGCTCAACTTTGAACAATCTTTGGCTCTGAAAATTGGGATGAGCTTAGTTATGCAGTCTTCAAGAATCAGAAACCCTGCTCCTTTTCTATCAAAGACTTATGATCTGTTACAAGAAGCTGGAAGCTTCCATTTTAAAGCAGCTGATGAAGAAGATGAAGAAGATGAAGAAGATGAAGAAGCTGAAGAAAATGGGGGCGGCAACAGGATTGTGTCCTGGAATGCAGATGGAAGTGGGTTCATAGTTTGGTCTCCTGCTGATTTCTCTGAGGTTTTATTGCCTAAATACTTTAAGCATAATAACTTCTCTAGCTTCATTCGCCAGCTTAATACTTATGTATGTATTCCTCTCTCTCTTTCTCTCTTTTTGAGAATGCCCCCTCCATTTGTTCTTCTCACAAACATCTCCAGGAAAAGATGTTAATTGTAAAGTGGATCCAATTGGCCATTTCCTGATAACTTGCGAACAGATTTAAAGAATTGAGTTGATTACATATTCTTGACATCATTTATTGGATCGGGTTTCGATCTAATTCTTGCAATATTGATGTCAGGGGTTCAAGAAGACGTCGCCAAAGAGGTGGGAGTTCAAGCACGAGAAATTTCAGAGGGGAAACAGGCACATGCTGGTGGAGATTGTACGTAAGAAATGTGAGCCGAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAGCTGCAACAATGGGTGTTGATCAGGAGAATGGAGACCATCTGTTACTAATGGAGGAGAACAAGAACCTAAGAAGACAGAAGCTGGAATTGCAGGCTCAAATAGCTCAATTCAAAGCACTTCATATTAGATTACTCGACTGTGTAGGTCGACGCATTGAAAAATAGCCTAAGGAGTTTTGATAATTAGAAAGATGGGTTGGTTGTGAAAGTTTCAGAAAG

mRNA sequence

CAGAACCTGGCAGCTTCCTAGCAAATGGCTGCAGATGCAGGGCTATAAGTACAGAAGCTGCTCAACTTTGAACAATCTTTGGCTCTGAAAATTGGGATGAGCTTAGTTATGCAGTCTTCAAGAATCAGAAACCCTGCTCCTTTTCTATCAAAGACTTATGATCTGTTACAAGAAGCTGGAAGCTTCCATTTTAAAGCAGCTGATGAAGAAGATGAAGAAGATGAAGAAGATGAAGAAGCTGAAGAAAATGGGGGCGGCAACAGGATTGTGTCCTGGAATGCAGATGGAAGTGGGTTCATAGTTTGGTCTCCTGCTGATTTCTCTGAGGTTTTATTGCCTAAATACTTTAAGCATAATAACTTCTCTAGCTTCATTCGCCAGCTTAATACTTATGGGTTCAAGAAGACGTCGCCAAAGAGGTGGGAGTTCAAGCACGAGAAATTTCAGAGGGGAAACAGGCACATGCTGGTGGAGATTGTACGTAAGAAATGTGAGCCGAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAGCTGCAACAATGGGTGTTGATCAGGAGAATGGAGACCATCTGTTACTAATGGAGGAGAACAAGAACCTAAGAAGACAGAAGCTGGAATTGCAGGCTCAAATAGCTCAATTCAAAGCACTTCATATTAGATTACTCGACTGTGTAGGTCGACGCATTGAAAAATAGCCTAAGGAGTTTTGATAATTAGAAAGATGGGTTGGTTGTGAAAGTTTCAGAAAG

Coding sequence (CDS)

ATGAGCTTAGTTATGCAGTCTTCAAGAATCAGAAACCCTGCTCCTTTTCTATCAAAGACTTATGATCTGTTACAAGAAGCTGGAAGCTTCCATTTTAAAGCAGCTGATGAAGAAGATGAAGAAGATGAAGAAGATGAAGAAGCTGAAGAAAATGGGGGCGGCAACAGGATTGTGTCCTGGAATGCAGATGGAAGTGGGTTCATAGTTTGGTCTCCTGCTGATTTCTCTGAGGTTTTATTGCCTAAATACTTTAAGCATAATAACTTCTCTAGCTTCATTCGCCAGCTTAATACTTATGGGTTCAAGAAGACGTCGCCAAAGAGGTGGGAGTTCAAGCACGAGAAATTTCAGAGGGGAAACAGGCACATGCTGGTGGAGATTGTACGTAAGAAATGTGAGCCGAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAGCTGCAACAATGGGTGTTGATCAGGAGAATGGAGACCATCTGTTACTAATGGAGGAGAACAAGAACCTAAGAAGACAGAAGCTGGAATTGCAGGCTCAAATAGCTCAATTCAAAGCACTTCATATTAGATTACTCGACTGTGTAGGTCGACGCATTGAAAAATAG

Protein sequence

MSLVMQSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQFKALHIRLLDCVGRRIEK
Homology
[Close]
BLAST of Cp4.1LG10g04930 vs. Swiss-Prot
Match: HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-27
Identity = 75/194 (38.66%), Postives = 104/194 (53.61%), Query Frame = 1 

Query: 5   MQSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADG 64
           M+      P PFL+KTYD++ +AG+                         +  VSW+A  
Sbjct: 42  MEGLHDAGPPPFLTKTYDMVDDAGT-------------------------DAAVSWSATS 101

Query: 65  SGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHML 124
           + F+VW P  F+ VLLP++FKHNNFSSF+RQLNTYGF+K  P RWEF +E F RG RH+L
Sbjct: 102 NSFVVWDPHAFATVLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLL 161

Query: 125 VEIVRKK-------CEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLEL 184
             I R+K        + S+ P +L   H G     +D+   D  LLM E   LR+++   
Sbjct: 162 KNIKRRKPPSHTASNQQSLGP-YLEVGHFG-YDAEIDRLKRDKQLLMAEVVKLRQEQQNT 205

Query: 185 QAQIAQFKALHIRL 192
           +A +   KA+  RL
Sbjct: 222 KANL---KAMEDRL 205

[Close]
BLAST of Cp4.1LG10g04930 vs. Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-27
Identity = 69/163 (42.33%), Postives = 92/163 (56.44%), Query Frame = 1 

Query: 7   SSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSG 66
           SS+   P PFL+KT++L+                   ED   ++      ++SWN DGS 
Sbjct: 15  SSQRSIPTPFLTKTFNLV-------------------EDSSIDD------VISWNEDGSS 74

Query: 67  FIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVE 126
           FIVW+P DF++ LLPK+FKHNNFSSF+RQLNTYGFKK  P RWEF ++ F+RG + +L E
Sbjct: 75  FIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLRE 134

Query: 127 IVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKN 170
           I R+K   +       SS +   TM V   N       E+N N
Sbjct: 135 IQRRKITTTHQTVVAPSSEQRNQTMVVSPSNSG-----EDNNN 147

[Close]
BLAST of Cp4.1LG10g04930 vs. Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 7.0e-27
Identity = 70/183 (38.25%), Postives = 102/183 (55.74%), Query Frame = 1 

Query: 10  IRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIV 69
           + +  PFLSKTYD++ +  +                         N +VSW++  + F+V
Sbjct: 22  VNSVPPFLSKTYDMVDDPLT-------------------------NEVVSWSSGNNSFVV 81

Query: 70  WSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVR 129
           WS  +FS+VLLPKYFKHNNFSSF+RQLNTYGF+K  P RWEF +E F RG + +L  IVR
Sbjct: 82  WSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVR 141

Query: 130 KK---CEPSVFPAFLRSSHEGAAT----MGVDQE----NGDHLLLMEENKNLRRQKLELQ 182
           +K    + +     ++SS  GA       G+++E      D  +LM+E   LR+Q+   +
Sbjct: 142 RKPSHVQQNQQQTQVQSSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATE 179

[Close]
BLAST of Cp4.1LG10g04930 vs. Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.1e-27
Identity = 68/173 (39.31%), Postives = 98/173 (56.65%), Query Frame = 1 

Query: 13  PAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIVWSP 72
           PAPFL KTY+++ ++ +                         ++IVSW+A+ + FIVW+ 
Sbjct: 21  PAPFLVKTYEMVDDSST-------------------------DQIVSWSANNNSFIVWNH 80

Query: 73  ADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVRKKC 132
           A+FS +LLP YFKHNNFSSFIRQLNTYGF+K  P+RWEF ++ F +  +H+L  I R+K 
Sbjct: 81  AEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRK- 140

Query: 133 EPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQFK 186
                P     SH        DQE     +L E+   L R+K  ++A++ +FK
Sbjct: 141 -----PI---HSHSHPPASSTDQERA---VLQEQMDKLSREKAAIEAKLLKFK 156

[Close]
BLAST of Cp4.1LG10g04930 vs. Swiss-Prot
Match: HFA4D_ORYSJ (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-26
Identity = 58/119 (48.74%), Postives = 74/119 (62.18%), Query Frame = 1 

Query: 13  PAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIVWSP 72
           P PFL KTY+++++A +                         N +VSW   G+ F+VW+P
Sbjct: 18  PPPFLIKTYEMVEDAAT-------------------------NHVVSWGPGGASFVVWNP 77

Query: 73  ADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVRKK 132
            DFS  LLPKYFKHNNFSSFIRQLNTYGF+K  P+RWEF +E F RG+ H+L  I R+K
Sbjct: 78  LDFSRDLLPKYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFIRGHTHLLKNIHRRK 111

[Close]
BLAST of Cp4.1LG10g04930 vs. TrEMBL
Match: A0A0A0KI26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517310 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.1e-94
Identity = 175/197 (88.83%), Postives = 183/197 (92.89%), Query Frame = 1 

Query: 5   MQSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADG 64
           MQSSR RNPAPFLSKTYDLL+EAGSFHF+ AD++ EEDEE+EE EE  GGNR VSWNA+G
Sbjct: 1   MQSSRTRNPAPFLSKTYDLLEEAGSFHFEEADQDQEEDEEEEEEEEKNGGNRTVSWNAEG 60

Query: 65  SGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHML 124
           SGFIVWSPADFSE LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEFKHEKFQRG RHML
Sbjct: 61  SGFIVWSPADFSEHLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGKRHML 120

Query: 125 VEIVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQF 184
           VEIVRKKCEPSVFPAFLRSSHEG ATM V+QENGDHLLLMEEN NLRRQKLELQAQIAQF
Sbjct: 121 VEIVRKKCEPSVFPAFLRSSHEGGATMAVNQENGDHLLLMEENNNLRRQKLELQAQIAQF 180

Query: 185 KALHIRLLDCVGRRIEK 202
           KALHIRLLDC+GR IEK
Sbjct: 181 KALHIRLLDCLGRCIEK 197

[Close]
BLAST of Cp4.1LG10g04930 vs. TrEMBL
Match: M5WVD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011804mg PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-63
Identity = 126/197 (63.96%), Postives = 149/197 (75.63%), Query Frame = 1 

Query: 6   QSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGS 65
           QS R R+PAPFLSKTYDLL+E                     AEE   G +IVSWNA+GS
Sbjct: 9   QSPRTRSPAPFLSKTYDLLEEGA-------------------AEEGDSGKKIVSWNAEGS 68

Query: 66  GFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLV 125
           GF+VWSPA+FSE+LLPKYFKHNNFSSFIRQLNTYGFKKTSP++WEFKHE+FQ+G RHMLV
Sbjct: 69  GFVVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPRQWEFKHERFQKGCRHMLV 128

Query: 126 EIVRKKCEPSVFPAFLRSSHEGAA--TMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQ 185
           EI RKKCEPS FP +L++S E  +  T     E  + LLLMEENKNLR+QKLELQ QI+Q
Sbjct: 129 EITRKKCEPSAFPVYLKASEESGSSNTAVAAAEENNCLLLMEENKNLRKQKLELQMQISQ 186

Query: 186 FKALHIRLLDCVGRRIE 201
           FKAL ++LLDC+ + +E
Sbjct: 189 FKALEMKLLDCLAQNME 186

[Close]
BLAST of Cp4.1LG10g04930 vs. TrEMBL
Match: U5FYD0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05130g PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.3e-60
Identity = 118/190 (62.11%), Postives = 147/190 (77.37%), Query Frame = 1 

Query: 6   QSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGS 65
           +S R R+PAPFLSKTYDLL+E G+                +  +++  G R+VSWNA+G+
Sbjct: 22  RSPRTRSPAPFLSKTYDLLEEGGAH---------------DSVDDHPHGKRVVSWNAEGN 81

Query: 66  GFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLV 125
           GF+VWSPA+FSE+ LP+YFKH+NFSSFIRQLNTYGFKKTS K+WEFKHEKFQ+G RHMLV
Sbjct: 82  GFVVWSPAEFSELTLPRYFKHSNFSSFIRQLNTYGFKKTSSKQWEFKHEKFQKGRRHMLV 141

Query: 126 EIVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQFK 185
           EI+RKKCEPS+FPA+L++S      + +D E  + L LM ENKNLRR+KLELQ QIAQFK
Sbjct: 142 EIIRKKCEPSMFPAYLKASSNQQNAI-IDMEETNCLTLMAENKNLRREKLELQIQIAQFK 195

Query: 186 ALHIRLLDCV 196
           AL  +LLDC+
Sbjct: 202 ALETKLLDCL 195

[Close]
BLAST of Cp4.1LG10g04930 vs. TrEMBL
Match: I3SY63_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-59
Identity = 121/199 (60.80%), Postives = 151/199 (75.88%), Query Frame = 1 

Query: 6   QSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGS 65
           QS R R PAPFL KTYDLL+E G+       EED              G++IVSWN++G+
Sbjct: 22  QSPRPRCPAPFLLKTYDLLEEGGA-------EED--------------GSKIVSWNSEGT 81

Query: 66  GFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLV 125
           GF+VWSPA+FSE+ LP+YFKHNNFSSFIRQLNTYGFKKTS KRWEF+HEKFQRG RHMLV
Sbjct: 82  GFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYGFKKTSSKRWEFQHEKFQRGCRHMLV 141

Query: 126 EIVRKKCEPSVFPAFLRSSHEGAATM---GVDQENGDHLLLMEENKNLRRQKLELQAQIA 185
           +I RKKCEPSVFP++L+SS E  ATM     ++    H LLMEENKNL++++LELQ QIA
Sbjct: 142 DITRKKCEPSVFPSYLKSSSEENATMTSNSTEESKDYHELLMEENKNLKKERLELQTQIA 199

Query: 186 QFKALHIRLLDCVGRRIEK 202
           + K+L ++LLDC+ + ++K
Sbjct: 202 ECKSLQMKLLDCLSQFMDK 199

[Close]
BLAST of Cp4.1LG10g04930 vs. TrEMBL
Match: B9H2V9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04260g PE=3 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59
Identity = 116/191 (60.73%), Postives = 148/191 (77.49%), Query Frame = 1 

Query: 5   MQSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADG 64
           ++S + + PAPFLSKTYDL++E G+                +   ++  G RIVSWNADG
Sbjct: 22  IKSPKTKCPAPFLSKTYDLIEEGGA----------------DGVVDHPHGKRIVSWNADG 81

Query: 65  SGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHML 124
            GFIVWSPA+FSE+ LP++FKHNNFSSFIRQLNTYGFKKTS K+WEFKHEKF RG RH+L
Sbjct: 82  DGFIVWSPAEFSELTLPRFFKHNNFSSFIRQLNTYGFKKTSSKQWEFKHEKFLRGRRHLL 141

Query: 125 VEIVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQF 184
           VEI RKKCEPS FPA+L +S+  +AT+ +++ N   L+LMEEN+NLRR+K+EL+ QIAQF
Sbjct: 142 VEITRKKCEPSTFPAYLEASNRESATLAMEESN--RLILMEENRNLRREKMELEIQIAQF 194

Query: 185 KALHIRLLDCV 196
           KAL ++LLDC+
Sbjct: 202 KALEMKLLDCL 194

[Close]
BLAST of Cp4.1LG10g04930 vs. TAIR10
Match: AT5G62020.1 (AT5G62020.1 heat shock transcription factor B2A)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 69/163 (42.33%), Postives = 92/163 (56.44%), Query Frame = 1 

Query: 7   SSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSG 66
           SS+   P PFL+KT++L+                   ED   ++      ++SWN DGS 
Sbjct: 15  SSQRSIPTPFLTKTFNLV-------------------EDSSIDD------VISWNEDGSS 74

Query: 67  FIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVE 126
           FIVW+P DF++ LLPK+FKHNNFSSF+RQLNTYGFKK  P RWEF ++ F+RG + +L E
Sbjct: 75  FIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLRE 134

Query: 127 IVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKN 170
           I R+K   +       SS +   TM V   N       E+N N
Sbjct: 135 IQRRKITTTHQTVVAPSSEQRNQTMVVSPSNSG-----EDNNN 147

[Close]
BLAST of Cp4.1LG10g04930 vs. TAIR10
Match: AT5G16820.1 (AT5G16820.1 heat shock factor 3)

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-28
Identity = 70/183 (38.25%), Postives = 102/183 (55.74%), Query Frame = 1 

Query: 10  IRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIV 69
           + +  PFLSKTYD++ +  +                         N +VSW++  + F+V
Sbjct: 22  VNSVPPFLSKTYDMVDDPLT-------------------------NEVVSWSSGNNSFVV 81

Query: 70  WSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVR 129
           WS  +FS+VLLPKYFKHNNFSSF+RQLNTYGF+K  P RWEF +E F RG + +L  IVR
Sbjct: 82  WSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVR 141

Query: 130 KK---CEPSVFPAFLRSSHEGAAT----MGVDQE----NGDHLLLMEENKNLRRQKLELQ 182
           +K    + +     ++SS  GA       G+++E      D  +LM+E   LR+Q+   +
Sbjct: 142 RKPSHVQQNQQQTQVQSSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATE 179

[Close]
BLAST of Cp4.1LG10g04930 vs. TAIR10
Match: AT4G13980.1 (AT4G13980.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 121.7 bits (304), Expect = 5.1e-28
Identity = 68/173 (39.31%), Postives = 98/173 (56.65%), Query Frame = 1 

Query: 13  PAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIVWSP 72
           PAPFL KTY+++ ++ +                         ++IVSW+A+ + FIVW+ 
Sbjct: 21  PAPFLVKTYEMVDDSST-------------------------DQIVSWSANNNSFIVWNH 80

Query: 73  ADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVRKKC 132
           A+FS +LLP YFKHNNFSSFIRQLNTYGF+K  P+RWEF ++ F +  +H+L  I R+K 
Sbjct: 81  AEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRK- 140

Query: 133 EPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQFK 186
                P     SH        DQE     +L E+   L R+K  ++A++ +FK
Sbjct: 141 -----PI---HSHSHPPASSTDQERA---VLQEQMDKLSREKAAIEAKLLKFK 156

[Close]
BLAST of Cp4.1LG10g04930 vs. TAIR10
Match: AT1G32330.1 (AT1G32330.1 heat shock transcription factor A1D)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-27
Identity = 69/175 (39.43%), Postives = 91/175 (52.00%), Query Frame = 1 

Query: 13  PAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIVWSP 72
           P PFLSKTYD++ +  +                         + IVSW+A+ + FIVW P
Sbjct: 35  PPPFLSKTYDMVDDHNT-------------------------DSIVSWSANNNSFIVWKP 94

Query: 73  ADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVRKKC 132
            +F+  LLPK FKHNNFSSF+RQLNTYGF+K  P RWEF +E F RG +H+L  I R+K 
Sbjct: 95  PEFARDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKP 154

Query: 133 EPSVFPAFLRSSHEGAATMGVDQ--ENGDHLLLMEENKNLRRQKLELQAQIAQFK 186
                    RS H       V    E G    L EE + L+R K  L  ++ + +
Sbjct: 155 AHGQGQGHQRSQHSNGQNSSVSACVEVG-KFGLEEEVERLKRDKNVLMQELVRLR 183

[Close]
BLAST of Cp4.1LG10g04930 vs. TAIR10
Match: AT4G17750.1 (AT4G17750.1 heat shock factor 1)

HSP 1 Score: 118.6 bits (296), Expect = 4.3e-27
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = 1 

Query: 13  PAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGSGFIVWSP 72
           P PFLSKTYD++++  +                         + IVSW+   + FIVW P
Sbjct: 50  PPPFLSKTYDMVEDPAT-------------------------DAIVSWSPTNNSFIVWDP 109

Query: 73  ADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLVEIVRKK 132
            +FS  LLPKYFKHNNFSSF+RQLNTYGF+K  P RWEF +E F RG +H+L +I R+K
Sbjct: 110 PEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRK 143

[Close]
BLAST of Cp4.1LG10g04930 vs. NCBI nr
Match: gi|659078703|ref|XP_008439862.1| (PREDICTED: heat stress transcription factor B-2a-like [Cucumis melo])

HSP 1 Score: 355.5 bits (911), Expect = 6.0e-95
Identity = 178/198 (89.90%), Postives = 186/198 (93.94%), Query Frame = 1 

Query: 5   MQSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDE-EDEEDEEAEENGGGNRIVSWNAD 64
           MQSSR RNPAPFLSKTYDLL+EAGSFHFK AD+EDE EDEE+EE EE  GGNRIVSWNA+
Sbjct: 1   MQSSRTRNPAPFLSKTYDLLEEAGSFHFKEADQEDEDEDEEEEEEEEENGGNRIVSWNAE 60

Query: 65  GSGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHM 124
           GSGFIVWSPADFSE+LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEFKHEKFQRG RHM
Sbjct: 61  GSGFIVWSPADFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGKRHM 120

Query: 125 LVEIVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQ 184
           LVEIVRKKCEPSVFPAFLRSSHEG ATM V+QENGDHLLLMEEN NLRRQKLELQAQIAQ
Sbjct: 121 LVEIVRKKCEPSVFPAFLRSSHEGGATMAVNQENGDHLLLMEENNNLRRQKLELQAQIAQ 180

Query: 185 FKALHIRLLDCVGRRIEK 202
           FKALHIRLLDC+G+ IEK
Sbjct: 181 FKALHIRLLDCLGQCIEK 198

[Close]
BLAST of Cp4.1LG10g04930 vs. NCBI nr
Match: gi|778720797|ref|XP_011658207.1| (PREDICTED: heat stress transcription factor B-2a-like [Cucumis sativus])

HSP 1 Score: 353.2 bits (905), Expect = 3.0e-94
Identity = 175/197 (88.83%), Postives = 183/197 (92.89%), Query Frame = 1 

Query: 5   MQSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADG 64
           MQSSR RNPAPFLSKTYDLL+EAGSFHF+ AD++ EEDEE+EE EE  GGNR VSWNA+G
Sbjct: 1   MQSSRTRNPAPFLSKTYDLLEEAGSFHFEEADQDQEEDEEEEEEEEKNGGNRTVSWNAEG 60

Query: 65  SGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHML 124
           SGFIVWSPADFSE LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEFKHEKFQRG RHML
Sbjct: 61  SGFIVWSPADFSEHLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGKRHML 120

Query: 125 VEIVRKKCEPSVFPAFLRSSHEGAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQF 184
           VEIVRKKCEPSVFPAFLRSSHEG ATM V+QENGDHLLLMEEN NLRRQKLELQAQIAQF
Sbjct: 121 VEIVRKKCEPSVFPAFLRSSHEGGATMAVNQENGDHLLLMEENNNLRRQKLELQAQIAQF 180

Query: 185 KALHIRLLDCVGRRIEK 202
           KALHIRLLDC+GR IEK
Sbjct: 181 KALHIRLLDCLGRCIEK 197

[Close]
BLAST of Cp4.1LG10g04930 vs. NCBI nr
Match: gi|764556533|ref|XP_011460676.1| (PREDICTED: heat stress transcription factor B-2a-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 254.2 bits (648), Expect = 1.9e-64
Identity = 133/202 (65.84%), Postives = 154/202 (76.24%), Query Frame = 1 

Query: 6   QSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNR-IVSWNADG 65
           QSSR R+PAPFLSKTYDLL                  EE+EE +++GGG R IVSWN +G
Sbjct: 30  QSSRTRSPAPFLSKTYDLL------------------EEEEEEDKDGGGRRSIVSWNGEG 89

Query: 66  SGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHML 125
           +GFIVWSPA+FSE+LLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQ+G RHML
Sbjct: 90  NGFIVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQKGCRHML 149

Query: 126 VEIVRKKCEPSVFPAFLRSSHEGAATMG---------VDQENGDHLLLMEENKNLRRQKL 185
           VEI RKKCEPS FP +L++S E  +  G          +QEN   LLLMEENKNLR+QK+
Sbjct: 150 VEINRKKCEPSAFPVYLKASEESTSATGGINRSMSNAAEQEN-QSLLLMEENKNLRKQKM 209

Query: 186 ELQAQIAQFKALHIRLLDCVGR 198
           ELQ Q++QFKAL  +LLDCVG+
Sbjct: 210 ELQMQLSQFKALETKLLDCVGQ 212

[Close]
BLAST of Cp4.1LG10g04930 vs. NCBI nr
Match: gi|645237175|ref|XP_008225084.1| (PREDICTED: heat stress transcription factor B-2a-like [Prunus mume])

HSP 1 Score: 253.1 bits (645), Expect = 4.2e-64
Identity = 127/197 (64.47%), Postives = 150/197 (76.14%), Query Frame = 1 

Query: 6   QSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGS 65
           QS R R+PAPFLSKTYDLL++                     AEE   G +IVSWNA+GS
Sbjct: 9   QSPRTRSPAPFLSKTYDLLEKGA-------------------AEEGDSGKKIVSWNAEGS 68

Query: 66  GFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLV 125
           GFIVWSPA+FSE+LLPKYFKHNNFSSFIRQLNTYGFKKTSPK+WEFKHEKFQ+G RHMLV
Sbjct: 69  GFIVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPKQWEFKHEKFQKGCRHMLV 128

Query: 126 EIVRKKCEPSVFPAFLRSSHE--GAATMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQ 185
           EI RKKCEPS FP +L++S E   ++T     E  + LLLMEENKNLR+QKLELQ Q++Q
Sbjct: 129 EITRKKCEPSAFPVYLKASEESGSSSTTVAAAEENNRLLLMEENKNLRKQKLELQMQLSQ 186

Query: 186 FKALHIRLLDCVGRRIE 201
           FKAL ++LLDC+ + +E
Sbjct: 189 FKALEMKLLDCLAQNME 186

[Close]
BLAST of Cp4.1LG10g04930 vs. NCBI nr
Match: gi|595874379|ref|XP_007212104.1| (hypothetical protein PRUPE_ppa011804mg [Prunus persica])

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-63
Identity = 126/197 (63.96%), Postives = 149/197 (75.63%), Query Frame = 1 

Query: 6   QSSRIRNPAPFLSKTYDLLQEAGSFHFKAADEEDEEDEEDEEAEENGGGNRIVSWNADGS 65
           QS R R+PAPFLSKTYDLL+E                     AEE   G +IVSWNA+GS
Sbjct: 9   QSPRTRSPAPFLSKTYDLLEEGA-------------------AEEGDSGKKIVSWNAEGS 68

Query: 66  GFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQRGNRHMLV 125
           GF+VWSPA+FSE+LLPKYFKHNNFSSFIRQLNTYGFKKTSP++WEFKHE+FQ+G RHMLV
Sbjct: 69  GFVVWSPAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPRQWEFKHERFQKGCRHMLV 128

Query: 126 EIVRKKCEPSVFPAFLRSSHEGAA--TMGVDQENGDHLLLMEENKNLRRQKLELQAQIAQ 185
           EI RKKCEPS FP +L++S E  +  T     E  + LLLMEENKNLR+QKLELQ QI+Q
Sbjct: 129 EITRKKCEPSAFPVYLKASEESGSSNTAVAAAEENNCLLLMEENKNLRKQKLELQMQISQ 186

Query: 186 FKALHIRLLDCVGRRIE 201
           FKAL ++LLDC+ + +E
Sbjct: 189 FKALEMKLLDCLAQNME 186

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g04930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HFA2B_ORYSJ2.4e-2738.66Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B ... [more]
HFB2A_ARATH3.1e-2742.33Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=... [more]
HFA1B_ARATH7.0e-2738.25Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=... [more]
HSFA5_ARATH9.1e-2739.31Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1[more]
HFA4D_ORYSJ1.2e-2648.74Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D ... [more]
BLAST of Cp4.1LG10g04930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI26_CUCSA2.1e-9488.83Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517310 PE=3 SV=1[more]
M5WVD4_PRUPE1.1e-6363.96Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011804mg PE=3 SV=1[more]
U5FYD0_POPTR3.3e-6062.11Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05130g PE=3 SV=1[more]
I3SY63_LOTJA1.3e-5960.80Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
B9H2V9_POPTR1.7e-5960.73Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04260g PE=3 SV=2[more]
BLAST of Cp4.1LG10g04930 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62020.11.8e-2842.33 heat shock transcription factor B2A[more]
AT5G16820.13.9e-2838.25 heat shock factor 3[more]
AT4G13980.15.1e-2839.31 winged-helix DNA-binding transcription factor family protein[more]
AT1G32330.12.0e-2739.43 heat shock transcription factor A1D[more]
AT4G17750.14.3e-2747.90 heat shock factor 1[more]
BLAST of Cp4.1LG10g04930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078703|ref|XP_008439862.1|6.0e-9589.90PREDICTED: heat stress transcription factor B-2a-like [Cucumis melo][more]
gi|778720797|ref|XP_011658207.1|3.0e-9488.83PREDICTED: heat stress transcription factor B-2a-like [Cucumis sativus][more]
gi|764556533|ref|XP_011460676.1|1.9e-6465.84PREDICTED: heat stress transcription factor B-2a-like [Fragaria vesca subsp. ves... [more]
gi|645237175|ref|XP_008225084.1|4.2e-6464.47PREDICTED: heat stress transcription factor B-2a-like [Prunus mume][more]
gi|595874379|ref|XP_007212104.1|1.6e-6363.96hypothetical protein PRUPE_ppa011804mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR027725HSF_fam
IPR011991Winged helix-turn-helix DNA-binding domain
IPR000232HSF_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009408 response to heat
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g04930.1Cp4.1LG10g04930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 16..130
score: 1.0
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 12..130
score: 3.1
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 9..125
score: 6.4
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 52..130
score: 1.9
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 54..200
score: 2.3E-97coord: 6..28
score: 2.3
NoneNo IPR availableunknownCoilCoilcoord: 160..187
scor
NoneNo IPR availablePANTHERPTHR10015:SF155SUBFAMILY NOT NAMEDcoord: 6..28
score: 2.3E-97coord: 54..200
score: 2.3