CmoCh07G002420 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G002420
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHeat stress transcription factor B-2a
LocationCmo_Chr07 : 1191784 .. 1192862 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGTGAATTTGATTATGCAGTCTTCAAAAACCAGAAACCCTGCTCCTTTTCTGTCAAAGACTTATGATCTGTTAGAAGAGGCTGGAAGCTTCCATTTTAAGGCAGCAGATCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATAGGATTGTGTCCTGGAATGCAGAGGGAAATGGGTTCATAGTTTGGTCTCCTGCGGAATTCTCTGAGGTTTTGTTGCCCAAGTACTTCAAGCACAATAATTTCTCTAGCTTCATTCGCCAGCTTAATACTTACGTATGTATTCTCTCATTCTCTATCTTTTTGAAAATGCCCCCACCACTTTTTATTCTCTGAAACATCTTGAAGAAGAATTATTCATTATAAAGAGGATCCAATTGACCACTTTCCTGATTCGAATGCTTAAATTCTGCCATAGAAATTGGATCTAATAGGTAATATGTTATCTATTTTATGTGTTCCTTATGCTCCCTCTCACATAGGTTTGGCCATGAGTACCCATGGATATTAATGGAGAAGGAAATGAGATTGTGGATAGGTTATGATATATTTGAGTCGAGTTTCAATCTAATTATTGTAATAATGGGAACAGGGGTTCAAGAAGACGTCGCAAAAGAGGTGGGAATTCAAGCACGAGAAGTTTCAGAGGGGCAACAAGCAGATGCTGGGGGAGATTGTACGTAAGAAATGTGAGCCTAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAGCTGAAACAATGGCGGTTGGTCAGAGGAATGGCGACCATCTGCAACTAATGGAAGAGAACAAGAATCTAAGAAGACGGAAGCTGGAATTGCAAGCTCGAATAGCCCGATTCAAAGCACTTCATATTAGATTACTGGACTGTCTAGATCAGTGCATTAAGAAGTAGCCTACAGAGTTTTGCTAATTAGAAAAAGGGGTTGGTTGTGAAAATTTGAGAAAGAAAGTAATACTTCTGGATTATGCATTTGCTCCAAATTGAGTTTCCATTGTCCACTCTAATTAGTTCTAGAGAAGTTGCTATCTGTAAGAGTTGATATGAACAATTAACAATTAACAAA

mRNA sequence

GGTGTGAATTTGATTATGCAGTCTTCAAAAACCAGAAACCCTGCTCCTTTTCTGTCAAAGACTTATGATCTGTTAGAAGAGGCTGGAAGCTTCCATTTTAAGGCAGCAGATCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATAGGATTGTGTCCTGGAATGCAGAGGGAAATGGGTTCATAGTTTGGTCTCCTGCGGAATTCTCTGAGGTTTTGTTGCCCAAGTACTTCAAGCACAATAATTTCTCTAGCTTCATTCGCCAGCTTAATACTTACGGGTTCAAGAAGACGTCGCAAAAGAGGTGGGAATTCAAGCACGAGAAGTTTCAGAGGGGCAACAAGCAGATGCTGGGGGAGATTGTACGTAAGAAATGTGAGCCTAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAGCTGAAACAATGGCGGTTGGTCAGAGGAATGGCGACCATCTGCAACTAATGGAAGAGAACAAGAATCTAAGAAGACGGAAGCTGGAATTGCAAGCTCGAATAGCCCGATTCAAAGCACTTCATATTAGATTACTGGACTGTCTAGATCAGTGCATTAAGAAGTAGCCTACAGAGTTTTGCTAATTAGAAAAAGGGGTTGGTTGTGAAAATTTGAGAAAGAAAGTAATACTTCTGGATTATGCATTTGCTCCAAATTGAGTTTCCATTGTCCACTCTAATTAGTTCTAGAGAAGTTGCTATCTGTAAGAGTTGATATGAACAATTAACAATTAACAAA

Coding sequence (CDS)

ATGCAGTCTTCAAAAACCAGAAACCCTGCTCCTTTTCTGTCAAAGACTTATGATCTGTTAGAAGAGGCTGGAAGCTTCCATTTTAAGGCAGCAGATCAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATAGGATTGTGTCCTGGAATGCAGAGGGAAATGGGTTCATAGTTTGGTCTCCTGCGGAATTCTCTGAGGTTTTGTTGCCCAAGTACTTCAAGCACAATAATTTCTCTAGCTTCATTCGCCAGCTTAATACTTACGGGTTCAAGAAGACGTCGCAAAAGAGGTGGGAATTCAAGCACGAGAAGTTTCAGAGGGGCAACAAGCAGATGCTGGGGGAGATTGTACGTAAGAAATGTGAGCCTAGTGTGTTTCCAGCCTTTCTAAGATCTTCTCATGAAGGAGCTGAAACAATGGCGGTTGGTCAGAGGAATGGCGACCATCTGCAACTAATGGAAGAGAACAAGAATCTAAGAAGACGGAAGCTGGAATTGCAAGCTCGAATAGCCCGATTCAAAGCACTTCATATTAGATTACTGGACTGTCTAGATCAGTGCATTAAGAAGTAG
Homology
[Close]
BLAST of CmoCh07G002420 vs. Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.8e-28
Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 1 

Query: 3   SSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSP 62
           SS+   P PFL+KT++L+E++                     + ++SWN +G+ FIVW+P
Sbjct: 15  SSQRSIPTPFLTKTFNLVEDSSI-------------------DDVISWNEDGSSFIVWNP 74

Query: 63  AEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKKC 122
            +F++ LLPK+FKHNNFSSF+RQLNTYGFKK    RWEF ++ F+RG K++L EI R+K 
Sbjct: 75  TDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKI 134

Query: 123 EPSVFPAFLRSSHEGAETMAVGQRN-----------------------------GDHLQL 178
             +       SS +  +TM V   N                             G  ++L
Sbjct: 135 TTTHQTVVAPSSEQRNQTMVVSPSNSGEDNNNNQVMSSSPSSWYCHQTKTTGNGGLSVEL 194

[Close]
BLAST of CmoCh07G002420 vs. Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 72/168 (42.86%), Postives = 98/168 (58.33%), Query Frame = 1 

Query: 11  PFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEVLL 70
           PFLSKTYD++++  +                   N +VSW++  N F+VWS  EFS+VLL
Sbjct: 27  PFLSKTYDMVDDPLT-------------------NEVVSWSSGNNSFVVWSAPEFSKVLL 86

Query: 71  PKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK---CEPSVF 130
           PKYFKHNNFSSF+RQLNTYGF+K    RWEF +E F RG KQ+L  IVR+K    + +  
Sbjct: 87  PKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQ 146

Query: 131 PAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFK 176
              ++SS  GA  + VG+       + EE + L+R K  L   + R +
Sbjct: 147 QTQVQSSSVGA-CVEVGK-----FGIEEEVERLKRDKNVLMQELVRLR 169

[Close]
BLAST of CmoCh07G002420 vs. Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 7.3e-26
Identity = 69/168 (41.07%), Postives = 88/168 (52.38%), Query Frame = 1 

Query: 9   PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEV 68
           P PFLSKTYD++++  +                   + IVSW+A  N FIVW P EF+  
Sbjct: 35  PPPFLSKTYDMVDDHNT-------------------DSIVSWSANNNSFIVWKPPEFARD 94

Query: 69  LLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKKCEPSVFP 128
           LLPK FKHNNFSSF+RQLNTYGF+K    RWEF +E F RG K +L  I R+K       
Sbjct: 95  LLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQGQ 154

Query: 129 AFLRSSHEGAETMAVGQ-RNGDHLQLMEENKNLRRRKLELQARIARFK 176
              RS H   +  +V          L EE + L+R K  L   + R +
Sbjct: 155 GHQRSQHSNGQNSSVSACVEVGKFGLEEEVERLKRDKNVLMQELVRLR 183

[Close]
BLAST of CmoCh07G002420 vs. Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-25
Identity = 73/176 (41.48%), Postives = 96/176 (54.55%), Query Frame = 1 

Query: 9   PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEV 68
           P PFLSKTYD++E+  +                   + IVSW+   N FIVW P EFS  
Sbjct: 50  PPPFLSKTYDMVEDPAT-------------------DAIVSWSPTNNSFIVWDPPEFSRD 109

Query: 69  LLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKKCEPSVFP 128
           LLPKYFKHNNFSSF+RQLNTYGF+K    RWEF +E F RG K +L +I R+K   SV  
Sbjct: 110 LLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRK---SVQG 169

Query: 129 AFLRSSHEGAETMAVGQRNGDHLQ---------LMEENKNLRRRKLELQARIARFK 176
               SS+  ++ ++ GQ +   L          L EE + L+R K  L   + + +
Sbjct: 170 HGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLR 203

[Close]
BLAST of CmoCh07G002420 vs. Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25
Identity = 62/135 (45.93%), Postives = 84/135 (62.22%), Query Frame = 1 

Query: 9   PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEV 68
           P PFL+KTY L+++       A D              ++SWN +G+ F+VW PAEF+  
Sbjct: 46  PTPFLTKTYQLVDDP------AVDD-------------VISWNDDGSTFVVWRPAEFARD 105

Query: 69  LLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKKCEPSVFP 128
           LLPKYFKHNNFSSF+RQLNTYGF+K    RWEF ++ F+RG +++L EI R+K  P   P
Sbjct: 106 LLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGERRLLCEIHRRKVTPPA-P 160

Query: 129 AFLRSSHEGAETMAV 144
           A   ++   A  MA+
Sbjct: 166 AATTAAVAAAIPMAL 160

[Close]
BLAST of CmoCh07G002420 vs. TrEMBL
Match: A0A0A0KI26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517310 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-85
Identity = 164/197 (83.25%), Postives = 177/197 (89.85%), Query Frame = 1 

Query: 1   MQSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEE------NRIVSWNAEG 60
           MQSS+TRNPAPFLSKTYDLLEEAGSFHF+ ADQ++EE+EEEEEE      NR VSWNAEG
Sbjct: 1   MQSSRTRNPAPFLSKTYDLLEEAGSFHFEEADQDQEEDEEEEEEEEKNGGNRTVSWNAEG 60

Query: 61  NGFIVWSPAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQML 120
           +GFIVWSPA+FSE LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEFKHEKFQRG + ML
Sbjct: 61  SGFIVWSPADFSEHLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGKRHML 120

Query: 121 GEIVRKKCEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARF 180
            EIVRKKCEPSVFPAFLRSSHEG  TMAV Q NGDHL LMEEN NLRR+KLELQA+IA+F
Sbjct: 121 VEIVRKKCEPSVFPAFLRSSHEGGATMAVNQENGDHLLLMEENNNLRRQKLELQAQIAQF 180

Query: 181 KALHIRLLDCLDQCIKK 192
           KALHIRLLDCL +CI+K
Sbjct: 181 KALHIRLLDCLGRCIEK 197

[Close]
BLAST of CmoCh07G002420 vs. TrEMBL
Match: I1J7X9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G143500 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-57
Identity = 118/186 (63.44%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 2   QSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWS 61
           QS + R PAPFL KTYDLLEE G              E  E+  +IVSWNAEG GF+VWS
Sbjct: 25  QSPRQRCPAPFLLKTYDLLEELG--------------ENIEDSTKIVSWNAEGTGFVVWS 84

Query: 62  PAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK 121
           P+EFSE+ LP+YFKHNNFSSFIRQLNTYGFKK S KRWEFKHEKFQRG + MLGEI RKK
Sbjct: 85  PSEFSELTLPRYFKHNNFSSFIRQLNTYGFKKISSKRWEFKHEKFQRGCRHMLGEITRKK 144

Query: 122 CEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFKALHIRL 181
           CEPSVFPA+L+SS E     +  + N DH  LMEENKNL++ +LELQ +I   KAL ++L
Sbjct: 145 CEPSVFPAYLKSSSEENNATSSTEENNDHQLLMEENKNLKKERLELQVQIDECKALEMKL 196

Query: 182 LDCLDQ 188
           L+CL Q
Sbjct: 205 LECLSQ 196

[Close]
BLAST of CmoCh07G002420 vs. TrEMBL
Match: A0A0B2S611_GLYSO (Heat stress transcription factor B-2a OS=Glycine soja GN=glysoja_028764 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-57
Identity = 118/186 (63.44%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 2   QSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWS 61
           QS + R PAPFL KTYDLLEE G              E  E+  +IVSWNAEG GF+VWS
Sbjct: 25  QSPRQRCPAPFLLKTYDLLEELG--------------ENIEDSTKIVSWNAEGTGFVVWS 84

Query: 62  PAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK 121
           P+EFSE+ LP+YFKHNNFSSFIRQLNTYGFKK S KRWEFKHEKFQRG + MLGEI RKK
Sbjct: 85  PSEFSELTLPRYFKHNNFSSFIRQLNTYGFKKISSKRWEFKHEKFQRGCRHMLGEITRKK 144

Query: 122 CEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFKALHIRL 181
           CEPSVFPA+L+SS E     +  + N DH  LMEENKNL++ +LELQ +I   KAL ++L
Sbjct: 145 CEPSVFPAYLKSSSEENNATSSTEENNDHQLLMEENKNLKKERLELQVQIDECKALEMKL 196

Query: 182 LDCLDQ 188
           L+CL Q
Sbjct: 205 LECLSQ 196

[Close]
BLAST of CmoCh07G002420 vs. TrEMBL
Match: M5WVD4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011804mg PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.3e-57
Identity = 118/188 (62.77%), Postives = 143/188 (76.06%), Query Frame = 1 

Query: 2   QSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWS 61
           QS +TR+PAPFLSKTYDLLEE  +             EE +   +IVSWNAEG+GF+VWS
Sbjct: 9   QSPRTRSPAPFLSKTYDLLEEGAA-------------EEGDSGKKIVSWNAEGSGFVVWS 68

Query: 62  PAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK 121
           PAEFSE+LLPKYFKHNNFSSFIRQLNTYGFKKTS ++WEFKHE+FQ+G + ML EI RKK
Sbjct: 69  PAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPRQWEFKHERFQKGCRHMLVEITRKK 128

Query: 122 CEPSVFPAFLRSSHE--GAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFKALHI 181
           CEPS FP +L++S E   + T        + L LMEENKNLR++KLELQ +I++FKAL +
Sbjct: 129 CEPSAFPVYLKASEESGSSNTAVAAAEENNCLLLMEENKNLRKQKLELQMQISQFKALEM 183

Query: 182 RLLDCLDQ 188
           +LLDCL Q
Sbjct: 189 KLLDCLAQ 183

[Close]
BLAST of CmoCh07G002420 vs. TrEMBL
Match: W9RZ03_9ROSA (Heat stress transcription factor B-2a OS=Morus notabilis GN=L484_014528 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56
Identity = 118/189 (62.43%), Postives = 142/189 (75.13%), Query Frame = 1 

Query: 2   QSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEE-----EEEEEEEEENRIVSWNAEGNG 61
           QS  T++P PFLSKTY+LLEE G+    ++D +      E      + + ++SWN EGNG
Sbjct: 36  QSPMTKSPTPFLSKTYNLLEEGGAGIIMSSDHDRSIINGEYYAGSYKRSSVISWNEEGNG 95

Query: 62  FIVWSPAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGE 121
           F+VWSPAEFSE+LLPKYFKHNNFSSF+RQLNTYGFKKTS KRWEFKH+KFQ+G K ML E
Sbjct: 96  FVVWSPAEFSELLLPKYFKHNNFSSFVRQLNTYGFKKTSSKRWEFKHDKFQKGCKHMLVE 155

Query: 122 IVRKKCEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFKA 181
           I RKKCEPSVFPAF ++S   +   A      + LQLMEENKNLRR K+ELQ +IA FKA
Sbjct: 156 ITRKKCEPSVFPAFRKASDRDS---AAATEENNRLQLMEENKNLRREKVELQTQIAHFKA 215

Query: 182 LHIRLLDCL 186
           L ++LLDCL
Sbjct: 216 LEVKLLDCL 221

[Close]
BLAST of CmoCh07G002420 vs. TAIR10
Match: AT5G62020.1 (AT5G62020.1 heat shock transcription factor B2A)

HSP 1 Score: 125.2 bits (313), Expect = 4.4e-29
Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 1 

Query: 3   SSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSP 62
           SS+   P PFL+KT++L+E++                     + ++SWN +G+ FIVW+P
Sbjct: 15  SSQRSIPTPFLTKTFNLVEDSSI-------------------DDVISWNEDGSSFIVWNP 74

Query: 63  AEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKKC 122
            +F++ LLPK+FKHNNFSSF+RQLNTYGFKK    RWEF ++ F+RG K++L EI R+K 
Sbjct: 75  TDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKI 134

Query: 123 EPSVFPAFLRSSHEGAETMAVGQRN-----------------------------GDHLQL 178
             +       SS +  +TM V   N                             G  ++L
Sbjct: 135 TTTHQTVVAPSSEQRNQTMVVSPSNSGEDNNNNQVMSSSPSSWYCHQTKTTGNGGLSVEL 194

[Close]
BLAST of CmoCh07G002420 vs. TAIR10
Match: AT5G16820.1 (AT5G16820.1 heat shock factor 3)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-27
Identity = 72/168 (42.86%), Postives = 98/168 (58.33%), Query Frame = 1 

Query: 11  PFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEVLL 70
           PFLSKTYD++++  +                   N +VSW++  N F+VWS  EFS+VLL
Sbjct: 27  PFLSKTYDMVDDPLT-------------------NEVVSWSSGNNSFVVWSAPEFSKVLL 86

Query: 71  PKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK---CEPSVF 130
           PKYFKHNNFSSF+RQLNTYGF+K    RWEF +E F RG KQ+L  IVR+K    + +  
Sbjct: 87  PKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQ 146

Query: 131 PAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFK 176
              ++SS  GA  + VG+       + EE + L+R K  L   + R +
Sbjct: 147 QTQVQSSSVGA-CVEVGK-----FGIEEEVERLKRDKNVLMQELVRLR 169

[Close]
BLAST of CmoCh07G002420 vs. TAIR10
Match: AT1G32330.1 (AT1G32330.1 heat shock transcription factor A1D)

HSP 1 Score: 118.6 bits (296), Expect = 4.1e-27
Identity = 69/168 (41.07%), Postives = 88/168 (52.38%), Query Frame = 1 

Query: 9   PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEV 68
           P PFLSKTYD++++  +                   + IVSW+A  N FIVW P EF+  
Sbjct: 35  PPPFLSKTYDMVDDHNT-------------------DSIVSWSANNNSFIVWKPPEFARD 94

Query: 69  LLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKKCEPSVFP 128
           LLPK FKHNNFSSF+RQLNTYGF+K    RWEF +E F RG K +L  I R+K       
Sbjct: 95  LLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQGQ 154

Query: 129 AFLRSSHEGAETMAVGQ-RNGDHLQLMEENKNLRRRKLELQARIARFK 176
              RS H   +  +V          L EE + L+R K  L   + R +
Sbjct: 155 GHQRSQHSNGQNSSVSACVEVGKFGLEEEVERLKRDKNVLMQELVRLR 183

[Close]
BLAST of CmoCh07G002420 vs. TAIR10
Match: AT4G17750.1 (AT4G17750.1 heat shock factor 1)

HSP 1 Score: 117.5 bits (293), Expect = 9.2e-27
Identity = 73/176 (41.48%), Postives = 96/176 (54.55%), Query Frame = 1 

Query: 9   PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEV 68
           P PFLSKTYD++E+  +                   + IVSW+   N FIVW P EFS  
Sbjct: 50  PPPFLSKTYDMVEDPAT-------------------DAIVSWSPTNNSFIVWDPPEFSRD 109

Query: 69  LLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKKCEPSVFP 128
           LLPKYFKHNNFSSF+RQLNTYGF+K    RWEF +E F RG K +L +I R+K   SV  
Sbjct: 110 LLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRK---SVQG 169

Query: 129 AFLRSSHEGAETMAVGQRNGDHLQ---------LMEENKNLRRRKLELQARIARFK 176
               SS+  ++ ++ GQ +   L          L EE + L+R K  L   + + +
Sbjct: 170 HGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLR 203

[Close]
BLAST of CmoCh07G002420 vs. TAIR10
Match: AT3G22830.1 (AT3G22830.1 heat shock transcription factor A6B)

HSP 1 Score: 115.2 bits (287), Expect = 4.6e-26
Identity = 56/113 (49.56%), Postives = 71/113 (62.83%), Query Frame = 1 

Query: 9   PAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWSPAEFSEV 68
           P PFL+KTYDL+E++ +                   N +VSW+   N FIVW P  FS  
Sbjct: 59  PPPFLTKTYDLVEDSRT-------------------NHVVSWSKSNNSFIVWDPQAFSVT 118

Query: 69  LLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK 122
           LLP++FKHNNFSSF+RQLNTYGF+K +  RWEF +E F RG K +L  I R+K
Sbjct: 119 LLPRFFKHNNFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRK 152

[Close]
BLAST of CmoCh07G002420 vs. NCBI nr
Match: gi|659078703|ref|XP_008439862.1| (PREDICTED: heat stress transcription factor B-2a-like [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 3.3e-87
Identity = 167/198 (84.34%), Postives = 179/198 (90.40%), Query Frame = 1 

Query: 1   MQSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEE-------NRIVSWNAE 60
           MQSS+TRNPAPFLSKTYDLLEEAGSFHFK ADQE+E+E+EEEEE       NRIVSWNAE
Sbjct: 1   MQSSRTRNPAPFLSKTYDLLEEAGSFHFKEADQEDEDEDEEEEEEEEENGGNRIVSWNAE 60

Query: 61  GNGFIVWSPAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQM 120
           G+GFIVWSPA+FSE+LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEFKHEKFQRG + M
Sbjct: 61  GSGFIVWSPADFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGKRHM 120

Query: 121 LGEIVRKKCEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIAR 180
           L EIVRKKCEPSVFPAFLRSSHEG  TMAV Q NGDHL LMEEN NLRR+KLELQA+IA+
Sbjct: 121 LVEIVRKKCEPSVFPAFLRSSHEGGATMAVNQENGDHLLLMEENNNLRRQKLELQAQIAQ 180

Query: 181 FKALHIRLLDCLDQCIKK 192
           FKALHIRLLDCL QCI+K
Sbjct: 181 FKALHIRLLDCLGQCIEK 198

[Close]
BLAST of CmoCh07G002420 vs. NCBI nr
Match: gi|778720797|ref|XP_011658207.1| (PREDICTED: heat stress transcription factor B-2a-like [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 2.4e-85
Identity = 164/197 (83.25%), Postives = 177/197 (89.85%), Query Frame = 1 

Query: 1   MQSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEE------NRIVSWNAEG 60
           MQSS+TRNPAPFLSKTYDLLEEAGSFHF+ ADQ++EE+EEEEEE      NR VSWNAEG
Sbjct: 1   MQSSRTRNPAPFLSKTYDLLEEAGSFHFEEADQDQEEDEEEEEEEEKNGGNRTVSWNAEG 60

Query: 61  NGFIVWSPAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQML 120
           +GFIVWSPA+FSE LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEFKHEKFQRG + ML
Sbjct: 61  SGFIVWSPADFSEHLLPKYFKHNNFSSFIRQLNTYGFKKTSSKRWEFKHEKFQRGKRHML 120

Query: 121 GEIVRKKCEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARF 180
            EIVRKKCEPSVFPAFLRSSHEG  TMAV Q NGDHL LMEEN NLRR+KLELQA+IA+F
Sbjct: 121 VEIVRKKCEPSVFPAFLRSSHEGGATMAVNQENGDHLLLMEENNNLRRQKLELQAQIAQF 180

Query: 181 KALHIRLLDCLDQCIKK 192
           KALHIRLLDCL +CI+K
Sbjct: 181 KALHIRLLDCLGRCIEK 197

[Close]
BLAST of CmoCh07G002420 vs. NCBI nr
Match: gi|645237175|ref|XP_008225084.1| (PREDICTED: heat stress transcription factor B-2a-like [Prunus mume])

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 121/189 (64.02%), Postives = 147/189 (77.78%), Query Frame = 1 

Query: 2   QSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWS 61
           QS +TR+PAPFLSKTYDLLE+  +             EE +   +IVSWNAEG+GFIVWS
Sbjct: 9   QSPRTRSPAPFLSKTYDLLEKGAA-------------EEGDSGKKIVSWNAEGSGFIVWS 68

Query: 62  PAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK 121
           PAEFSE+LLPKYFKHNNFSSFIRQLNTYGFKKTS K+WEFKHEKFQ+G + ML EI RKK
Sbjct: 69  PAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPKQWEFKHEKFQKGCRHMLVEITRKK 128

Query: 122 CEPSVFPAFLRSSHE---GAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFKALH 181
           CEPS FP +L++S E    + T+A  + N + L LMEENKNLR++KLELQ ++++FKAL 
Sbjct: 129 CEPSAFPVYLKASEESGSSSTTVAAAEEN-NRLLLMEENKNLRKQKLELQMQLSQFKALE 183

Query: 182 IRLLDCLDQ 188
           ++LLDCL Q
Sbjct: 189 MKLLDCLAQ 183

[Close]
BLAST of CmoCh07G002420 vs. NCBI nr
Match: gi|356495198|ref|XP_003516466.1| (PREDICTED: heat stress transcription factor B-2a-like [Glycine max])

HSP 1 Score: 230.3 bits (586), Expect = 2.8e-57
Identity = 118/186 (63.44%), Postives = 137/186 (73.66%), Query Frame = 1 

Query: 2   QSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWS 61
           QS + R PAPFL KTYDLLEE G              E  E+  +IVSWNAEG GF+VWS
Sbjct: 25  QSPRQRCPAPFLLKTYDLLEELG--------------ENIEDSTKIVSWNAEGTGFVVWS 84

Query: 62  PAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK 121
           P+EFSE+ LP+YFKHNNFSSFIRQLNTYGFKK S KRWEFKHEKFQRG + MLGEI RKK
Sbjct: 85  PSEFSELTLPRYFKHNNFSSFIRQLNTYGFKKISSKRWEFKHEKFQRGCRHMLGEITRKK 144

Query: 122 CEPSVFPAFLRSSHEGAETMAVGQRNGDHLQLMEENKNLRRRKLELQARIARFKALHIRL 181
           CEPSVFPA+L+SS E     +  + N DH  LMEENKNL++ +LELQ +I   KAL ++L
Sbjct: 145 CEPSVFPAYLKSSSEENNATSSTEENNDHQLLMEENKNLKKERLELQVQIDECKALEMKL 196

Query: 182 LDCLDQ 188
           L+CL Q
Sbjct: 205 LECLSQ 196

[Close]
BLAST of CmoCh07G002420 vs. NCBI nr
Match: gi|764556533|ref|XP_011460676.1| (PREDICTED: heat stress transcription factor B-2a-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 229.6 bits (584), Expect = 4.7e-57
Identity = 121/194 (62.37%), Postives = 143/194 (73.71%), Query Frame = 1 

Query: 2   QSSKTRNPAPFLSKTYDLLEEAGSFHFKAADQEEEEEEEEEEENRIVSWNAEGNGFIVWS 61
           QSS+TR+PAPFLSKTYDLLEE           EEEE+++      IVSWN EGNGFIVWS
Sbjct: 30  QSSRTRSPAPFLSKTYDLLEE-----------EEEEDKDGGGRRSIVSWNGEGNGFIVWS 89

Query: 62  PAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKRWEFKHEKFQRGNKQMLGEIVRKK 121
           PAEFSE+LLPKYFKHNNFSSFIRQLNTYGFKKTS KRWEFKHEKFQ+G + ML EI RKK
Sbjct: 90  PAEFSELLLPKYFKHNNFSSFIRQLNTYGFKKTSPKRWEFKHEKFQKGCRHMLVEINRKK 149

Query: 122 CEPSVFPAFLRSSHEGAETMA--------VGQRNGDHLQLMEENKNLRRRKLELQARIAR 181
           CEPS FP +L++S E                ++    L LMEENKNLR++K+ELQ ++++
Sbjct: 150 CEPSAFPVYLKASEESTSATGGINRSMSNAAEQENQSLLLMEENKNLRKQKMELQMQLSQ 209

Query: 182 FKALHIRLLDCLDQ 188
           FKAL  +LLDC+ Q
Sbjct: 210 FKALETKLLDCVGQ 212

The following BLAST results are available for this feature:
BLAST of CmoCh07G002420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HFB2A_ARATH7.8e-2834.80Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=... [more]
HFA1B_ARATH2.5e-2642.86Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=... [more]
HFA1D_ARATH7.3e-2641.07Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=1 SV=... [more]
HFA1A_ARATH1.6e-2541.48Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=... [more]
HFB2B_ORYSJ2.1e-2545.93Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B ... [more]
BLAST of CmoCh07G002420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI26_CUCSA1.7e-8583.25Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517310 PE=3 SV=1[more]
I1J7X9_SOYBN1.9e-5763.44Uncharacterized protein OS=Glycine max GN=GLYMA_01G143500 PE=3 SV=1[more]
A0A0B2S611_GLYSO1.9e-5763.44Heat stress transcription factor B-2a OS=Glycine soja GN=glysoja_028764 PE=3 SV=... [more]
M5WVD4_PRUPE3.3e-5762.77Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011804mg PE=3 SV=1[more]
W9RZ03_9ROSA1.2e-5662.43Heat stress transcription factor B-2a OS=Morus notabilis GN=L484_014528 PE=3 SV=... [more]
BLAST of CmoCh07G002420 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62020.14.4e-2934.80 heat shock transcription factor B2A[more]
AT5G16820.11.4e-2742.86 heat shock factor 3[more]
AT1G32330.14.1e-2741.07 heat shock transcription factor A1D[more]
AT4G17750.19.2e-2741.48 heat shock factor 1[more]
AT3G22830.14.6e-2649.56 heat shock transcription factor A6B[more]
BLAST of CmoCh07G002420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078703|ref|XP_008439862.1|3.3e-8784.34PREDICTED: heat stress transcription factor B-2a-like [Cucumis melo][more]
gi|778720797|ref|XP_011658207.1|2.4e-8583.25PREDICTED: heat stress transcription factor B-2a-like [Cucumis sativus][more]
gi|645237175|ref|XP_008225084.1|1.2e-5764.02PREDICTED: heat stress transcription factor B-2a-like [Prunus mume][more]
gi|356495198|ref|XP_003516466.1|2.8e-5763.44PREDICTED: heat stress transcription factor B-2a-like [Glycine max][more]
gi|764556533|ref|XP_011460676.1|4.7e-5762.37PREDICTED: heat stress transcription factor B-2a-like [Fragaria vesca subsp. ves... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR011991Winged helix-turn-helix DNA-binding domain
IPR027725HSF_fam
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009408 response to heat
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G002420.1CmoCh07G002420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 69..81
score: 1.7E-11coord: 82..94
score: 1.7E-11coord: 31..54
score: 1.7
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 12..120
score: 9.8
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 8..120
score: 9.0
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 3..114
score: 7.0
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 41..120
score: 4.08
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 2..24
score: 2.3E-96coord: 44..189
score: 2.3
NoneNo IPR availableunknownCoilCoilcoord: 150..177
score: -coord: 33..53
scor
NoneNo IPR availablePANTHERPTHR10015:SF155SUBFAMILY NOT NAMEDcoord: 2..24
score: 2.3E-96coord: 44..189
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G002420CmaCh03G012600Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G002420CmaCh07G002470Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G002420Cla009616Watermelon (97103) v1cmowmB816
CmoCh07G002420Csa6G517310Cucumber (Chinese Long) v2cmocuB865
CmoCh07G002420MELO3C007286Melon (DHL92) v3.5.1cmomeB782
CmoCh07G002420ClCG01G022930Watermelon (Charleston Gray)cmowcgB755
CmoCh07G002420CSPI06G34580Wild cucumber (PI 183967)cmocpiB873
CmoCh07G002420Cp4.1LG10g04930Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G002420Cp4.1LG19g07110Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G002420MELO3C007286.2Melon (DHL92) v3.6.1cmomedB886
CmoCh07G002420CsaV3_6G050100Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G002420Cla97C01G022830Watermelon (97103) v2cmowmbB849
CmoCh07G002420Bhi03G000324Wax gourdcmowgoB1051
CmoCh07G002420CsGy6G034120Cucumber (Gy14) v2cgybcmoB843
CmoCh07G002420Carg07785Silver-seed gourdcarcmoB0888
CmoCh07G002420Carg15290Silver-seed gourdcarcmoB0745
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G002420Cucumber (Gy14) v2cgybcmoB133
CmoCh07G002420Melon (DHL92) v3.6.1cmomedB875
CmoCh07G002420Silver-seed gourdcarcmoB0046
CmoCh07G002420Silver-seed gourdcarcmoB0209
CmoCh07G002420Silver-seed gourdcarcmoB0239
CmoCh07G002420Silver-seed gourdcarcmoB1270
CmoCh07G002420Cucumber (Chinese Long) v3cmocucB0989
CmoCh07G002420Wax gourdcmowgoB1080
CmoCh07G002420Cucurbita moschata (Rifu)cmocmoB036
CmoCh07G002420Cucurbita moschata (Rifu)cmocmoB132
CmoCh07G002420Cucurbita moschata (Rifu)cmocmoB190
CmoCh07G002420Cucurbita moschata (Rifu)cmocmoB349
CmoCh07G002420Cucurbita moschata (Rifu)cmocmoB400
CmoCh07G002420Cucurbita moschata (Rifu)cmocmoB459
CmoCh07G002420Cucurbita moschata (Rifu)cmocmoB444
CmoCh07G002420Cucumber (Gy14) v1cgycmoB0043
CmoCh07G002420Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G002420Cucurbita maxima (Rimu)cmacmoB430
CmoCh07G002420Cucurbita maxima (Rimu)cmacmoB535
CmoCh07G002420Cucurbita maxima (Rimu)cmacmoB629
CmoCh07G002420Cucurbita pepo (Zucchini)cmocpeB799
CmoCh07G002420Cucurbita pepo (Zucchini)cmocpeB818
CmoCh07G002420Cucurbita pepo (Zucchini)cmocpeB825
CmoCh07G002420Cucurbita pepo (Zucchini)cmocpeB826
CmoCh07G002420Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G002420Bottle gourd (USVL1VR-Ls)cmolsiB783