CmaCh06G005930 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G005930
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionShort-chain dehydrogenase, putative
LocationCma_Chr06 : 2868080 .. 2869554 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTCATTTGCACTCCATCACCGCCTTAGTCACAGGTTTGTCTTCTTTGAATTTTGAATTTCGATTTTGTTACATTACGTTTTTCTTTCAATTTTAACTAATTTAAGCGCAGGGGAGCGACGTCGGGAATCGGAGCGGAGACGGCGAGAGTCTTAGCCAAGCGCGGCGCCAGGATCGTCATTCCGGTTCGCAACCTTAAAGCCGCCGTGGAAGTGAAGGCGCGAATCTGATCGGAATTGGACTGTTTCGATCATTCACGAATCACGGTGATGGTTCTCAATCTAAGTTCTATGAATTTCGACACGAACTTCGTCTCCAATTTCGAGTCCTTACATTTGCCTCTTAATCTCCTGATGTAATTCGTCCACAAACATCGCTAATTCACTCTGTTGAATCGAAGGAACAAACTACAATGATTTATTAAAGAAACTAAAAGACGGATTCGTTCTGATTTTTCAGTAACAATGCCGCAGGTTCTGTTACGAACGTGCAATTTCTGAAGACGGAATGGAGTTGACGTTCGCTACGAATTATCTAGGTAAGTACGCAGAACAAAACTTTTCATGTCTAATGATGAGAACTTCTGCCATTATTAATCTGATCGATCATGTCGGTCATTTTCTTTTCACGAAACTTTTGTTGAATAAGATGATCGAAACCGCCAAATCAACGGGAATCCAAGGCCGAATAGTGAATGTGACGTCCAATATCCGCAGCCGGTTTTCCGGCGACGTATTCGAATGTCTCGGCCAGATAAGTCTGAGCAACAGGTAAGATTAATTTTCCTTTGCTTGCGTATCAATGGCGGTCTGATAGCGATACTGATATTAACTCGCAGCAGAGAGTACGATGCGACACGTGCTTACACCGTCCAACTCGCTCACAGACTTCAGGTTCTTCCTCGATATCAATTGGTATGTTCATAGAACGATTTCACGCTCGACTTTGTTTTTGACAAAATCGGAACAGGAAATGGAGGCAAATGTTACAGTAAACTGTGTTCATCCGGGCGTAGTGAAAACCAAATTAAACAGAGATCGTGAAGGCTTCGTCATAGGTATCCAAACAATTGAAGCATTTCTATATAACTAATTAATGAATGAGAAATGCATATTTGATTCTCTACAATGCGTCAATTTCCTCAAGGAGCAGCAACAAGTTGCCAAGTAGCCGCGAATCGGAGCGTTGATAATGTGAATGGCAAATACTTTGCGGATTGCAATGATTAAGGTGGTTGTGAATCCAAATTAGGTACCAAGTCCACGCACTTAGCTGCACGCCTGCCTCTGAAACCATCGTCTCCACATTTACAGGTAACCCTGATTCTAATCTCAACAATTTGATCACTCAATTCAATGAATCACGTAGGATTGAGTTGTTTGAGTTCAAATAAATAATAGATACGGAATCCTTTGACTAATAGACATTGTCCTAATTTTGGTACTTTCCCTCATAGTTTTTTAACTTGTTTG

mRNA sequence

ATGTTCTCATTTGCACTCCATCACCGCCTTAGTCACAGGCGCGAATCTGATCGGAATTGGACTGTTTCGATCATTCACGAATCACGGTTCTGTTACGAACGTGCAATTTCTGAAGACGGAATGGAGTTGACGTTCGCTACGAATTATCTAGATGATCGAAACCGCCAAATCAACGGGAATCCAAGGCCGAATAGTGAATGTGACGTCCAATATCCGCAGCCGGTTTTCCGGCGACGTATTCGAATGTCTCGGCCAGATAAGTCTGAGCAACAGGTAAGATTAATTTTCCTTTGCTTGCGTATCAATGGCGGTCTGATAGCGATACTGATATTAACTCGCAGCAGAGAGTACGATGCGACACGTGCTTACACCGTCCAACTCGCTCACAGACTTCAGGAAATGGAGGCAAATGTTACAGTAAACTGTGTTCATCCGGGCGTAGTGAAAACCAAATTAAACAGAGATCGTGAAGGCTTCGTCATAGGAGCAGCAACAAGTTGCCAAGTAGCCGCGAATCGGAGCGTTGATAATGTGAATGGCAAATACTTTGCGGATTGCAATGATTAAGGTGGTTGTGAATCCAAATTAGGTACCAAGTCCACGCACTTAGCTGCACGCCTGCCTCTGAAACCATCGTCTCCACATTTACAGGTAACCCTGATTCTAATCTCAACAATTTGATCACTCAATTCAATGAATCACGTAGGATTGAGTTGTTTGAGTTCAAATAAATAATAGATACGGAATCCTTTGACTAATAGACATTGTCCTAATTTTGGTACTTTCCCTCATAGTTTTTTAACTTGTTTG

Coding sequence (CDS)

ATGTTCTCATTTGCACTCCATCACCGCCTTAGTCACAGGCGCGAATCTGATCGGAATTGGACTGTTTCGATCATTCACGAATCACGGTTCTGTTACGAACGTGCAATTTCTGAAGACGGAATGGAGTTGACGTTCGCTACGAATTATCTAGATGATCGAAACCGCCAAATCAACGGGAATCCAAGGCCGAATAGTGAATGTGACGTCCAATATCCGCAGCCGGTTTTCCGGCGACGTATTCGAATGTCTCGGCCAGATAAGTCTGAGCAACAGGTAAGATTAATTTTCCTTTGCTTGCGTATCAATGGCGGTCTGATAGCGATACTGATATTAACTCGCAGCAGAGAGTACGATGCGACACGTGCTTACACCGTCCAACTCGCTCACAGACTTCAGGAAATGGAGGCAAATGTTACAGTAAACTGTGTTCATCCGGGCGTAGTGAAAACCAAATTAAACAGAGATCGTGAAGGCTTCGTCATAGGAGCAGCAACAAGTTGCCAAGTAGCCGCGAATCGGAGCGTTGATAATGTGAATGGCAAATACTTTGCGGATTGCAATGATTAA

Protein sequence

MFSFALHHRLSHRRESDRNWTVSIIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMSRPDKSEQQVRLIFLCLRINGGLIAILILTRSREYDATRAYTVQLAHRLQEMEANVTVNCVHPGVVKTKLNRDREGFVIGAATSCQVAANRSVDNVNGKYFADCND
Homology
[Close]
BLAST of CmaCh06G005930 vs. TrEMBL
Match: A0A0A0L3R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G003470 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.8e-47
Identity = 109/170 (64.12%), Postives = 123/170 (72.35%), Query Frame = 1 

Query: 51  DDRNRQINGNPRPNSECDVQYPQPVFRRRIRMSRPDKSEQQ---VRLIFLCLRINGG-LI 110
           DDRN +I+GNPRPNSECDVQ+PQ VFRRRIR+S+PDK EQQ   VRLI L L ING  +I
Sbjct: 134 DDRNGRIDGNPRPNSECDVQHPQLVFRRRIRISQPDKPEQQQVQVRLILLSLCINGAPII 193

Query: 111 AILILTRSREYDATRAY----------TVQLAHRLQEMEANVTVNCVHPGVVKTKLNRDR 170
            ILI+ +SREYDATRAY          TVQLAHRLQEM+ANVTVNCVHPGVV+T LNRDR
Sbjct: 194 VILIIIQSREYDATRAYAFSKLANLLHTVQLAHRLQEMKANVTVNCVHPGVVRTNLNRDR 253

Query: 171 EGFV------------------IGAATSCQVAANRSVDNVNGKYFADCND 189
           EGF+                    AATSC VA +R V+NVNGKYFADCN+
Sbjct: 254 EGFIKDLIFFMASKSKLLKTIPQSAATSCYVATHRKVENVNGKYFADCNE 303

[Close]
BLAST of CmaCh06G005930 vs. TrEMBL
Match: A0A072TUU0_MEDTR (NAD(P)-binding rossmann-fold protein OS=Medicago truncatula GN=MTR_8g099995 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21
Identity = 73/195 (37.44%), Postives = 102/195 (52.31%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMS 83
           I +  +F  E AISEDG+E+TFATNYL                      + + ++ +  +
Sbjct: 119 INNAGKFAEEHAISEDGVEMTFATNYLGH----------------FVLTKMLMKKMVETA 178

Query: 84  RPDKSEQQVRLIFLCLR--INGGLIAIL--ILTRSREYDATRAY----------TVQLAH 143
           +    E ++  +   +     G +I+ L  I     EYDATRAY          T +LA 
Sbjct: 179 KETGIEGRIVNVSSAIHGWFTGDVISYLAHICRNKSEYDATRAYALSKLANVFHTNELAR 238

Query: 144 RLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVAANR 189
           RL+EM+ANVTVNCVHPGVV+T+L R+REGF+                  AAT+C VA + 
Sbjct: 239 RLKEMDANVTVNCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTCYVATHP 297

[Close]
BLAST of CmaCh06G005930 vs. TrEMBL
Match: A0A0D2SCP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G020400 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-21
Identity = 73/192 (38.02%), Postives = 100/192 (52.08%), Query Frame = 1 

Query: 29  RFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMSRPDKS 88
           RF +  AISEDG+E+TFATNYL                    +          M    ++
Sbjct: 124 RFAHHHAISEDGIEMTFATNYLG------------------HFLLTKLLLNKMMETTKQT 183

Query: 89  EQQVRLIFLCLRINGGLIAILI-----LTRSR-EYDATRAY----------TVQLAHRLQ 148
             Q R++ +   ING     +I     ++RS+ +YDATRAY          T +LA RL+
Sbjct: 184 GVQGRIVNVSSSINGWFSGDMIRYLGQISRSKSQYDATRAYALSKLANVLHTKELAQRLK 243

Query: 149 EMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVAANRSVD 189
           EM ANVTVNCVHPG+V+T+L R+REGF+                  A+T+C VA    ++
Sbjct: 244 EMGANVTVNCVHPGIVRTRLTREREGFITDLVFFLASKLLKTTPQAASTTCYVATYPRLE 297

[Close]
BLAST of CmaCh06G005930 vs. TrEMBL
Match: A0A124SCZ2_CYNCS (Glucose/ribitol dehydrogenase OS=Cynara cardunculus var. scolymus GN=Ccrd_002640 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.4e-21
Identity = 74/195 (37.95%), Postives = 103/195 (52.82%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMS 83
           I +  +F Y+  ISEDG+E+TFATNYL                      + + ++ I  +
Sbjct: 119 INNAGKFSYDHGISEDGIEMTFATNYLGH----------------FLLTKLLLKKMIATA 178

Query: 84  RPDKSEQQVRLIFLCLR--INGGLIAIL-ILTRSRE-YDATRAYTV----------QLAH 143
           +    + ++  +   +    +G LI  L  +TR +  YDATRAY +          +LA 
Sbjct: 179 KTTGIQGRIVNVSSGIHTWFSGDLIRSLGQITRDKSHYDATRAYAISKLANVLHTKELAR 238

Query: 144 RLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVAANR 189
           RLQ+MEANVTVNCVHPGVV+T L RDREGF+                  AAT+C VA + 
Sbjct: 239 RLQQMEANVTVNCVHPGVVRTGLTRDREGFITDFVFFLTSKFLKTIPQAAATTCYVATHP 297

[Close]
BLAST of CmaCh06G005930 vs. TrEMBL
Match: V4VIN7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021041mg PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.4e-21
Identity = 71/195 (36.41%), Postives = 103/195 (52.82%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMS 83
           I +  +F ++ AISEDG+E+TFATNYL                      + + ++ I  +
Sbjct: 119 INNAGKFAHQHAISEDGIEMTFATNYLGH----------------FLLTKLLLKKMIETA 178

Query: 84  RPDKSEQQVRLIFLCLR--INGGLIAIL--ILTRSREYDATRAY----------TVQLAH 143
           +    + ++  +   +    +G +I  L  I      YDATRAY          T +LA 
Sbjct: 179 KATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQ 238

Query: 144 RLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVAANR 189
           RL++MEANVTVNCVHPG+V+T+L R+REGF+                 GAAT+C VA + 
Sbjct: 239 RLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHP 297

[Close]
BLAST of CmaCh06G005930 vs. TAIR10
Match: AT4G24050.1 (AT4G24050.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21
Identity = 73/200 (36.50%), Postives = 101/200 (50.50%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDD---RNRQINGNPRPNSECDVQYPQPVFRRRI 83
           I +  +  +E AISEDG+E+TFATNYL      N  +N   +   E  VQ          
Sbjct: 118 INNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQG--------- 177

Query: 84  RMSRPDKSEQQVRLIFLCLRINGGLIAILI-----LTRSR-EYDATRAY----------T 143
                       R++ +   I+G     LI     +++ + ++DATRAY          T
Sbjct: 178 ------------RIVNVTSGIHGWFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHT 237

Query: 144 VQLAHRLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQ 189
            +L+ RLQ++ ANVTVNCVHPGVV+T+L RDREG +                  AAT+C 
Sbjct: 238 KELSSRLQKIGANVTVNCVHPGVVRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCY 296

[Close]
BLAST of CmaCh06G005930 vs. TAIR10
Match: AT1G64590.1 (AT1G64590.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 3.3e-21
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 1 

Query: 22  VSIIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIR 81
           + I +  ++ ++ A+SEDG+E+TFATNYL                      + + ++ I 
Sbjct: 116 ILINNAGKYAHKHALSEDGVEMTFATNYLGH----------------FLLTKLLLKKMIE 175

Query: 82  MSRPDKSEQQVRLIFLCLR--INGGLIAIL--ILTRSREYDATRAY----------TVQL 141
            +     + ++  +   +    +G ++  L  I   +R YDATRAY          TV+L
Sbjct: 176 TAAQTGVQGRIVNVTSVVHSWFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVEL 235

Query: 142 AHRLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVAA 189
           +  L +M+ANVT NCVHPG+VKT+L RDREG V                  AAT+C VA 
Sbjct: 236 SRLLHKMDANVTANCVHPGIVKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTCYVAT 295

[Close]
BLAST of CmaCh06G005930 vs. TAIR10
Match: AT5G50130.1 (AT5G50130.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 56/183 (30.60%), Postives = 81/183 (44.26%), Query Frame = 1 

Query: 37  SEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMSRPDKSEQQVRLIF 96
           SE+ +ELTFATN+L                    Y          +   +KS  + R+I 
Sbjct: 133 SEEKIELTFATNFLG------------------HYLLTEMLIEKMIDTAEKSGIEGRIIN 192

Query: 97  LCLRINGGLIAIL-----ILTRSREYDATRAYTVQ----------LAHRLQEMEANVTVN 156
           L   I+  +         +L     Y+ TRAY             L+ +L++  ANVT+N
Sbjct: 193 LSSVIHNWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTIN 252

Query: 157 CVHPGVVKTKLNRDREG------FVI----------GAATSCQVAANRSVDNVNGKYFAD 189
            VHPG+VKT + R  +G      F+I          GAAT+C VA +     ++GKYFAD
Sbjct: 253 AVHPGIVKTGIIRAHKGLFTDSLFLIASKLLKSISQGAATTCYVALSNETKGLSGKYFAD 297

[Close]
BLAST of CmaCh06G005930 vs. TAIR10
Match: AT2G37540.1 (AT2G37540.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 8.5e-09
Identity = 33/77 (42.86%), Postives = 42/77 (54.55%), Query Frame = 1 

Query: 127 LAHRLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVA 186
           L+ RLQE   N+T+N VHPG+V T L R   GF +                GAAT+C VA
Sbjct: 216 LSRRLQEEGVNITINSVHPGLVTTNLFR-YSGFSMKVFRAMTFLFWKNIPQGAATTCYVA 275

Query: 187 ANRSVDNVNGKYFADCN 188
            +  ++ V GKYF DCN
Sbjct: 276 LHPDLEGVTGKYFGDCN 291

[Close]
BLAST of CmaCh06G005930 vs. TAIR10
Match: AT5G02540.1 (AT5G02540.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 1 

Query: 126 QLAHRLQEMEANVTVNCVHPGVVKTKLNRDR---------------EGFVIGAATSCQVA 185
           +L+ +LQE   N+T N VHPG++ T L +                 +    GAAT+C VA
Sbjct: 215 ELSRQLQEEGVNITANSVHPGLILTNLFQHTALLMRFLKFFSFYLWKNIPQGAATTCYVA 274

Query: 186 ANRSVDNVNGKYFADCND 189
            + SV  V GKYFADCN+
Sbjct: 275 LHPSVKGVTGKYFADCNE 292

[Close]
BLAST of CmaCh06G005930 vs. NCBI nr
Match: gi|700200546|gb|KGN55679.1| (hypothetical protein Csa_3G003470 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 9.7e-47
Identity = 109/170 (64.12%), Postives = 123/170 (72.35%), Query Frame = 1 

Query: 51  DDRNRQINGNPRPNSECDVQYPQPVFRRRIRMSRPDKSEQQ---VRLIFLCLRINGG-LI 110
           DDRN +I+GNPRPNSECDVQ+PQ VFRRRIR+S+PDK EQQ   VRLI L L ING  +I
Sbjct: 134 DDRNGRIDGNPRPNSECDVQHPQLVFRRRIRISQPDKPEQQQVQVRLILLSLCINGAPII 193

Query: 111 AILILTRSREYDATRAY----------TVQLAHRLQEMEANVTVNCVHPGVVKTKLNRDR 170
            ILI+ +SREYDATRAY          TVQLAHRLQEM+ANVTVNCVHPGVV+T LNRDR
Sbjct: 194 VILIIIQSREYDATRAYAFSKLANLLHTVQLAHRLQEMKANVTVNCVHPGVVRTNLNRDR 253

Query: 171 EGFV------------------IGAATSCQVAANRSVDNVNGKYFADCND 189
           EGF+                    AATSC VA +R V+NVNGKYFADCN+
Sbjct: 254 EGFIKDLIFFMASKSKLLKTIPQSAATSCYVATHRKVENVNGKYFADCNE 303

[Close]
BLAST of CmaCh06G005930 vs. NCBI nr
Match: gi|778674830|ref|XP_011650304.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 88/202 (43.56%), Postives = 109/202 (53.96%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMS 83
           I +  RFCYE AISEDG+E+TFATNYL                      + +  + I  +
Sbjct: 122 INNAGRFCYEHAISEDGIEMTFATNYLGH----------------FLLTKLLLNKMIETA 181

Query: 84  RPDKSEQQVRLIFLCLRIN----GGLIAILIL-----TRSREYDATRAY----------T 143
             + +  Q R++ +   I+    G +   L        + REYDATRAY          T
Sbjct: 182 --ESTGIQGRIVNVTSNIHSWFSGDVFEYLSQISRNNNKYREYDATRAYAFSKLANLLHT 241

Query: 144 VQLAHRLQEMEANVTVNCVHPGVVKTKLNRDREGFV------------------IGAATS 189
           VQLAHRLQEM+ANVTVNCVHPGVV+T LNRDREGF+                    AATS
Sbjct: 242 VQLAHRLQEMKANVTVNCVHPGVVRTNLNRDREGFIKDLIFFMASKSKLLKTIPQSAATS 301

[Close]
BLAST of CmaCh06G005930 vs. NCBI nr
Match: gi|659096562|ref|XP_008449162.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis melo])

HSP 1 Score: 127.5 bits (319), Expect = 2.5e-26
Identity = 86/203 (42.36%), Postives = 107/203 (52.71%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMS 83
           I +  RFCYE A SEDG+E+TFATNYL                      + +  + I  +
Sbjct: 122 INNAGRFCYEHATSEDGIEMTFATNYLGH----------------FLLTKLLLNKMIETA 181

Query: 84  RPDKSEQQVRLIFLCLRIN----GGLIAILIL------TRSREYDATRAY---------- 143
           +   +  Q R++ +   I+    G +   L          +REYDATRAY          
Sbjct: 182 K--STGIQGRIVNVTSNIHSWFSGDIFEYLSQISRNYNNNNREYDATRAYSFSKLANLLH 241

Query: 144 TVQLAHRLQEMEANVTVNCVHPGVVKTKLNRDREGFV------------------IGAAT 189
           TVQLAHRLQEM+ANVTVNCVHPGVV+T LNRDREGF+                    AAT
Sbjct: 242 TVQLAHRLQEMKANVTVNCVHPGVVRTNLNRDREGFLKDLIFFMASKSKLLKTIPQSAAT 301

[Close]
BLAST of CmaCh06G005930 vs. NCBI nr
Match: gi|1009156034|ref|XP_015896030.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 110.2 bits (274), Expect = 4.1e-21
Identity = 73/195 (37.44%), Postives = 100/195 (51.28%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMS 83
           I +  +F +E A+SEDG+E+TFATNYL                      + + +  I  +
Sbjct: 119 INNAGKFAHEHAVSEDGIEMTFATNYLGH----------------FLLTKLLLKNMIETA 178

Query: 84  RPDKSEQQVRLIFLCLR--INGGLIAIL--ILTRSREYDATRAY----------TVQLAH 143
           +    + ++  +   +    +G +I  L  I    R YDATRAY          T +LA 
Sbjct: 179 KVTGVQGRIVNVSSSIHCWFSGDMIRYLGEISRSKRHYDATRAYALSKLANVLHTKELAR 238

Query: 144 RLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVAANR 189
           RL+EMEANVTVNCVHPG+V+T+L R+REGFV                  AAT+C VA N 
Sbjct: 239 RLKEMEANVTVNCVHPGIVRTRLTREREGFVTDLVFFLTSKFLKTIPQAAATTCYVATNP 297

[Close]
BLAST of CmaCh06G005930 vs. NCBI nr
Match: gi|922338545|ref|XP_013447262.1| (NAD(P)-binding rossmann-fold protein [Medicago truncatula])

HSP 1 Score: 109.8 bits (273), Expect = 5.4e-21
Identity = 73/195 (37.44%), Postives = 102/195 (52.31%), Query Frame = 1 

Query: 24  IIHESRFCYERAISEDGMELTFATNYLDDRNRQINGNPRPNSECDVQYPQPVFRRRIRMS 83
           I +  +F  E AISEDG+E+TFATNYL                      + + ++ +  +
Sbjct: 119 INNAGKFAEEHAISEDGVEMTFATNYLGH----------------FVLTKMLMKKMVETA 178

Query: 84  RPDKSEQQVRLIFLCLR--INGGLIAIL--ILTRSREYDATRAY----------TVQLAH 143
           +    E ++  +   +     G +I+ L  I     EYDATRAY          T +LA 
Sbjct: 179 KETGIEGRIVNVSSAIHGWFTGDVISYLAHICRNKSEYDATRAYALSKLANVFHTNELAR 238

Query: 144 RLQEMEANVTVNCVHPGVVKTKLNRDREGFVI----------------GAATSCQVAANR 189
           RL+EM+ANVTVNCVHPGVV+T+L R+REGF+                  AAT+C VA + 
Sbjct: 239 RLKEMDANVTVNCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTCYVATHP 297

The following BLAST results are available for this feature:
BLAST of CmaCh06G005930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh06G005930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3R1_CUCSA6.8e-4764.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G003470 PE=4 SV=1[more]
A0A072TUU0_MEDTR3.7e-2137.44NAD(P)-binding rossmann-fold protein OS=Medicago truncatula GN=MTR_8g099995 PE=3... [more]
A0A0D2SCP5_GOSRA3.7e-2138.02Uncharacterized protein OS=Gossypium raimondii GN=B456_007G020400 PE=3 SV=1[more]
A0A124SCZ2_CYNCS6.4e-2137.95Glucose/ribitol dehydrogenase OS=Cynara cardunculus var. scolymus GN=Ccrd_002640... [more]
V4VIN7_9ROSI6.4e-2136.41Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021041mg PE=3 SV=1[more]
BLAST of CmaCh06G005930 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24050.13.3e-2136.50 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G64590.13.3e-2133.50 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT5G50130.11.2e-1030.60 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G37540.18.5e-0942.86 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT5G02540.11.9e-0839.74 NAD(P)-binding Rossmann-fold superfamily protein[more]
BLAST of CmaCh06G005930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200546|gb|KGN55679.1|9.7e-4764.12hypothetical protein Csa_3G003470 [Cucumis sativus][more]
gi|778674830|ref|XP_011650304.1|1.0e-2743.56PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus... [more]
gi|659096562|ref|XP_008449162.1|2.5e-2642.36PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis melo][more]
gi|1009156034|ref|XP_015896030.1|4.1e-2137.44PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Ziziphus jujuba][more]
gi|922338545|ref|XP_013447262.1|5.4e-2137.44NAD(P)-binding rossmann-fold protein [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G005930.1CmaCh06G005930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 119..183
score: 3.
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 119..159
score: 2.
NoneNo IPR availablePANTHERPTHR24320FAMILY NOT NAMEDcoord: 127..188
score: 8.2
NoneNo IPR availablePANTHERPTHR24320:SF81NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEINcoord: 127..188
score: 8.2