Carg19489 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19489
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	short-chain dehydrogenase TIC 32, chloroplastic-like
Location	Cucurbita_argyrosperma_scaffold_204 : 448166 .. 449679 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGAAATGTTCAAGTACCTCGTCGGTTCCGCTGGAGCAAGCGGCTACGGCTCTAAATCCACCGCCGAAGAAGTCAGTGAATCTTGTATGAACTCCATCACCGCCATAGTCACAGGTTGTTTTTCCGAATTTTGATTCTGATTCCATTACATTTCATTAGATTCTCACTCGCTAACGAATTTTGGAGCAGGAGCGACGTCGGGAATCGGAGAGGAGACGGCGAGAGTCTTGGCCAAGCGCGGTGTAAGGATCATCATTCCGGCTCGAAATCTAAAAGCCGCTGAGGAAGCGAAGGCGAGAATCGTATCCGAATCGGATTGTTTTGATCATTCACGAATCACGGTTATGGCTCTCGATCTTAGCTCTGTGAATTCCGTCGTGAACTTCGTCTCCAATTTCGAGTCGTTAAATTTGCCTCTTAATCTTCTCATGTAATTCACTCAAACACGTCGCTAATTCACTCTGTTGTATCGAATGATCACACGATATTTAATTTACCGAAGAAACTAAAACTCAGTTTCGTTCTAATTTTCAGAAACAACGCAGGCAGGTTCTGTTACGAACATGCGTTTTCTGAAGACGGAATTGAGATGACTTTCGCTACTAATTATCTTGGCAAGAACATTACAGAACAATTTTATTTTCATCTCCTTTAATCACGAGGCCTTTTACCATTATTGACGAACCGATGATGCAGGTCATTTTCTCTTGACGAAACTTCTATTGAATAGGATGATAGAAACCGCCAAATCGACAGGAGTCCAAGGCCGTATAGTGAATGTGACGTCCAACATCCATAGCTGGTTTTCGGGCGACATATTCGAATATCTCGGCCAGATAAGCCAGAAAAACAGGTATGAATAATGATTAATTTCCCTTCGCTTATGCATTACTGGCGGTTTGATCATAGCGACAGTGATATTCACTTGCAGCAGAGTGTACGATTCGACACGTGCTTACGCGTTCTCCAAACTCGCAAATGTCTTGCACACTGTTCAACTCGCTCACAAACTCCAGGTTCTTCAATACATCACATTCATTGGCATTTTAATTGAATGATTTCACGTCCGCGTTGGATTTTGACACAATCGAAACAGGAAATGAAGGCGAATGTTACGGTGAACTGTGTTCATCCAGGCGTTGTGAAAACCAATTTGAACAGAGAACGCGAAGGCTTCGTCACAGGTACGAACTACCGAACAATTAAGCTCCTGCATGGAAACTAATCGATCTAAAAAGCGTATACAGATAATTAATTCAATGAGAATGCAGATTTGATTTTCTACATGGCGTCCAAATCAAGGTTGTTGAAGACAATTCCTGAAGGTGCAGCAACAAGTTGTTACGTAGCCACGAATCGGAACGTGGAAAATGTGAATGGAAATTACTTCGCGGATTGCAACGATCAAGGAAGTTGCGAATGCAAAACGAAATCCGCGCATTTGGCTGAAGGCCTATGGTCCGCCTCCGAAACCATCGTCTCCACACTTACCGGTAAGCCTCAACCCTAA

mRNA sequence

ATGCTTGAAATGTTCAAGTACCTCGTCGGTTCCGCTGGAGCAAGCGGCTACGGCTCTAAATCCACCGCCGAAGAAGTCAGTGAATCTTGTATGAACTCCATCACCGCCATAGTCACAGGAGCGACGTCGGGAATCGGAGAGGAGACGGCGAGAGTCTTGGCCAAGCGCGGTGTAAGGATCATCATTCCGGCTCGAAATCTAAAAGCCGCTGAGGAAGCGAAGGCGAGAATCGTATCCGAATCGGATTGTTTTGATCATTCACGAATCACGGTTATGGCTCTCGATCTTAGCTCTGTGAATTCCGTCGTGAACTTCGTCTCCAATTTCGAGTCGTTAAATTTGCCTCTTAATCTTCTCATAAACAACGCAGGCAGGTTCTGTTACGAACATGCGTTTTCTGAAGACGGAATTGAGATGACTTTCGCTACTAATTATCTTGGTCATTTTCTCTTGACGAAACTTCTATTGAATAGGATGATAGAAACCGCCAAATCGACAGGAGTCCAAGGCCGTATAGTGAATGTGACGTCCAACATCCATAGCTGGTTTTCGGGCGACATATTCGAATATCTCGGCCAGATAAGCCAGAAAAACAGAGTGTACGATTCGACACGTGCTTACGCGTTCTCCAAACTCGCAAATGTCTTGCACACTGTTCAACTCGCTCACAAACTCCAGGAAATGAAGGCGAATGTTACGGTGAACTGTGTTCATCCAGGCGTTGTGAAAACCAATTTGAACAGAGAACGCGAAGGCTTCGTCACAGATTTGATTTTCTACATGGCGTCCAAATCAAGGTTGTTGAAGACAATTCCTGAAGGTGCAGCAACAAGTTGTTACGTAGCCACGAATCGGAACGTGGAAAATGTGAATGGAAATTACTTCGCGGATTGCAACGATCAAGGAAGTTGCGAATGCAAAACGAAATCCGCGCATTTGGCTGAAGGCCTATGGTCCGCCTCCGAAACCATCGTCTCCACACTTACCGGTAAGCCTCAACCCTAA

Coding sequence (CDS)

ATGCTTGAAATGTTCAAGTACCTCGTCGGTTCCGCTGGAGCAAGCGGCTACGGCTCTAAATCCACCGCCGAAGAAGTCAGTGAATCTTGTATGAACTCCATCACCGCCATAGTCACAGGAGCGACGTCGGGAATCGGAGAGGAGACGGCGAGAGTCTTGGCCAAGCGCGGTGTAAGGATCATCATTCCGGCTCGAAATCTAAAAGCCGCTGAGGAAGCGAAGGCGAGAATCGTATCCGAATCGGATTGTTTTGATCATTCACGAATCACGGTTATGGCTCTCGATCTTAGCTCTGTGAATTCCGTCGTGAACTTCGTCTCCAATTTCGAGTCGTTAAATTTGCCTCTTAATCTTCTCATAAACAACGCAGGCAGGTTCTGTTACGAACATGCGTTTTCTGAAGACGGAATTGAGATGACTTTCGCTACTAATTATCTTGGTCATTTTCTCTTGACGAAACTTCTATTGAATAGGATGATAGAAACCGCCAAATCGACAGGAGTCCAAGGCCGTATAGTGAATGTGACGTCCAACATCCATAGCTGGTTTTCGGGCGACATATTCGAATATCTCGGCCAGATAAGCCAGAAAAACAGAGTGTACGATTCGACACGTGCTTACGCGTTCTCCAAACTCGCAAATGTCTTGCACACTGTTCAACTCGCTCACAAACTCCAGGAAATGAAGGCGAATGTTACGGTGAACTGTGTTCATCCAGGCGTTGTGAAAACCAATTTGAACAGAGAACGCGAAGGCTTCGTCACAGATTTGATTTTCTACATGGCGTCCAAATCAAGGTTGTTGAAGACAATTCCTGAAGGTGCAGCAACAAGTTGTTACGTAGCCACGAATCGGAACGTGGAAAATGTGAATGGAAATTACTTCGCGGATTGCAACGATCAAGGAAGTTGCGAATGCAAAACGAAATCCGCGCATTTGGCTGAAGGCCTATGGTCCGCCTCCGAAACCATCGTCTCCACACTTACCGGTAAGCCTCAACCCTAA

Protein sequence

MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRIIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFVSNFESLNLPLNLLINNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIHSWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPGVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCNDQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP

Homology

[Close]

BLAST of Carg19489 vs. NCBI nr
Match: XP_022923251.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 646.4 bits (1666), Expect = 5.5e-182
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60
           MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI
Sbjct: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60

Query: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120
           IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI
Sbjct: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120

Query: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180
           NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH
Sbjct: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180

Query: 181 SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG 240
           SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG
Sbjct: 181 SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG 240

Query: 241 VVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCND 300
           VVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCND
Sbjct: 241 VVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCND 300

Query: 301 QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335
           QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP
Sbjct: 301 QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 334

[Close]

BLAST of Carg19489 vs. NCBI nr
Match: XP_023552712.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 643.7 bits (1659), Expect = 3.6e-181
Identity = 332/334 (99.40%), Postives = 333/334 (99.70%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60
           MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI
Sbjct: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60

Query: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120
           IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI
Sbjct: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120

Query: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180
           NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH
Sbjct: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180

Query: 181 SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG 240
           SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG
Sbjct: 181 SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG 240

Query: 241 VVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCND 300
           VVKTNLNREREGFVTDLIFYM SKSRLLKTIPEGAAT+CYVATNRNVENVNGNYFADCND
Sbjct: 241 VVKTNLNREREGFVTDLIFYMTSKSRLLKTIPEGAATTCYVATNRNVENVNGNYFADCND 300

Query: 301 QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335
           QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP
Sbjct: 301 QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 334

[Close]

BLAST of Carg19489 vs. NCBI nr
Match: XP_022923250.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 641.7 bits (1654), Expect = 1.4e-180
Identity = 334/335 (99.70%), Postives = 334/335 (99.70%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60
           MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI
Sbjct: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60

Query: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120
           IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI
Sbjct: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120

Query: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180
           NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH
Sbjct: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180

Query: 181 SWFSGDIFEYLGQISQKN-RVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP 240
           SWFSGDIFEYLGQISQKN RVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP
Sbjct: 181 SWFSGDIFEYLGQISQKNSRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP 240

Query: 241 GVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCN 300
           GVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCN
Sbjct: 241 GVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCN 300

Query: 301 DQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335
           DQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP
Sbjct: 301 DQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335

[Close]

BLAST of Carg19489 vs. NCBI nr
Match: XP_023552711.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.0 bits (1647), Expect = 8.8e-180
Identity = 332/335 (99.10%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60
           MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI
Sbjct: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60

Query: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120
           IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI
Sbjct: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120

Query: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180
           NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH
Sbjct: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180

Query: 181 SWFSGDIFEYLGQISQKN-RVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP 240
           SWFSGDIFEYLGQISQKN RVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP
Sbjct: 181 SWFSGDIFEYLGQISQKNSRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP 240

Query: 241 GVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCN 300
           GVVKTNLNREREGFVTDLIFYM SKSRLLKTIPEGAAT+CYVATNRNVENVNGNYFADCN
Sbjct: 241 GVVKTNLNREREGFVTDLIFYMTSKSRLLKTIPEGAATTCYVATNRNVENVNGNYFADCN 300

Query: 301 DQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335
           DQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP
Sbjct: 301 DQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335

[Close]

BLAST of Carg19489 vs. NCBI nr
Match: XP_022965266.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 632.1 bits (1629), Expect = 1.1e-177
Identity = 324/334 (97.01%), Postives = 325/334 (97.31%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60
           MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI
Sbjct: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESCMNSITAIVTGATSGIGEETARVLAKRGVRI 60

Query: 61  IIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLI 120
           IIPARNLKAAEEAKARIVSES+CFD SRITVMALDLSSV SVVNF    ESLNLPLNLLI
Sbjct: 61  IIPARNLKAAEEAKARIVSESNCFDRSRITVMALDLSSVKSVVNFVSNFESLNLPLNLLI 120

Query: 121 NNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180
           NNAGRFCYEHA SEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH
Sbjct: 121 NNAGRFCYEHALSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH 180

Query: 181 SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG 240
           SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG
Sbjct: 181 SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG 240

Query: 241 VVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCND 300
           VVKTNLNREREGFVTDLIFYMASKSRLLK IPEGAATSCYVATNRNVENVNG YFADCND
Sbjct: 241 VVKTNLNREREGFVTDLIFYMASKSRLLKIIPEGAATSCYVATNRNVENVNGKYFADCND 300

Query: 301 QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335
           QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP
Sbjct: 301 QGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 334

[Close]

BLAST of Carg19489 vs. TAIR10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 416.0 bits (1068), Expect = 2.2e-116
Identity = 219/327 (66.97%), Postives = 263/327 (80.43%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESC-MNSITAIVTGATSGIGEETARVLAKRGVR 60
           M+E  KYL+G+AGASG+GSKSTAEEV+E+C + SITA++TGATSGIG ETARVLAKRG R
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGAR 60

Query: 61  IIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLL 120
           +I PARN+KAAEEAK RIVSE   F  + I VM LDLSS+ SV NF    ESL+LPLNLL
Sbjct: 61  LIFPARNVKAAEEAKERIVSE---FPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLL 120

Query: 121 INNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNI 180
           INNAG+  +EHA SEDGIEMTFATNYLGHFLLT LLLN+MI+TA+ TGVQGRIVNVTS I
Sbjct: 121 INNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGI 180

Query: 181 HSWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP 240
           H WFSGD+ EYL  ISQ    +D+TRAYA SKLANVLHT +L+ +LQ++ ANVTVNCVHP
Sbjct: 181 HGWFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHP 240

Query: 241 GVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCN 300
           GVV+T L R+REG +TDL+F++ASK  L+KT+P+ AAT+CYVATN  + NV+G YF DCN
Sbjct: 241 GVVRTRLTRDREGLLTDLVFFLASK--LVKTVPQAAATTCYVATNPRLVNVSGKYFTDCN 300

Query: 301 DQGSCECKTKSAHLAEGLWSASETIVS 327
           +       T S+  A  LW+ASE +V+
Sbjct: 301 ETTPSGLGTNSSE-ATKLWAASEILVT 321

[Close]

BLAST of Carg19489 vs. TAIR10
Match: AT1G64590.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 400.6 bits (1028), Expect = 9.5e-112
Identity = 209/332 (62.95%), Postives = 259/332 (78.01%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVS-ESCMNSITAIVTGATSGIGEETARVLAKRGVR 60
           M+E  K+L+GS G SG+GS+STA+ V+  S + S+TAI+TGATSGIG ETARVLAKRG R
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGAR 60

Query: 61  IIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLL 120
           +++PAR++K AEE KARI+SE   F  + I VM LDLSS+ SV  F    ESLNLPLN+L
Sbjct: 61  LVLPARSVKTAEETKARILSE---FPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNIL 120

Query: 121 INNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNI 180
           INNAG++ ++HA SEDG+EMTFATNYLGHFLLTKLLL +MIETA  TGVQGRIVNVTS +
Sbjct: 121 INNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVV 180

Query: 181 HSWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHP 240
           HSWFSGD+ +YL  IS+ NR YD+TRAYA SKLANVLHTV+L+  L +M ANVT NCVHP
Sbjct: 181 HSWFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHP 240

Query: 241 GVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCN 300
           G+VKT L R+REG VTDL+F++ SK  LLK++P+ AAT+CYVAT+  + NV G YF+DCN
Sbjct: 241 GIVKTRLTRDREGVVTDLVFFLTSK--LLKSVPQAAATTCYVATSPRLRNVCGKYFSDCN 300

Query: 301 D-----QGSCECKTKSAHLAEGLWSASETIVS 327
           +      GSC  K      A+ LW+AS+ +VS
Sbjct: 301 EARSSKSGSCNLK------AQRLWTASDLLVS 321

[Close]

BLAST of Carg19489 vs. TAIR10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 285.4 bits (729), Expect = 4.5e-77
Identity = 154/323 (47.68%), Postives = 223/323 (69.04%), Query Frame = 0


Query: 6   KYLVGSAGASGYGSKSTAEEVSESCM---NSITAIVTGATSGIGEETARVLAKRGVRIII 65
           +YL G AG +G+GS+STAE+V++      + +TAI+TG TSGIG ETARVLAKRGVR+++
Sbjct: 6   RYLAGIAGPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVM 65

Query: 66  PARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLINN 125
             R++K AE  K RI+ E+   D   I +  +DLSS++SV  F     S +LPLN+LINN
Sbjct: 66  AVRDMKKAEMVKERIIRENPEAD---IILFEIDLSSLSSVARFCSQFLSQDLPLNILINN 125

Query: 126 AGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIHSW 185
           AG F     FSE+ IE+TFATN+LGH+LLT++L+ +MI+TA+ +G++GRI+N++S IH+W
Sbjct: 126 AGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIHNW 185

Query: 186 FSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPGVV 245
              D F +   +   +R Y+ TRAYA SKLA +LH   L+ +L++  ANVT+N VHPG+V
Sbjct: 186 VKPDCFSFPKLLHPISR-YNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGIV 245

Query: 246 KTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCNDQG 305
           KT + R  +G  TD +F +ASK  LLK+I +GAAT+CYVA +   + ++G YFADCN+  
Sbjct: 246 KTGIIRAHKGLFTDSLFLIASK--LLKSISQGAATTCYVALSNETKGLSGKYFADCNET- 305

Query: 306 SCECKTKSAHLAEGLWSASETIV 326
           +C       ++A  L + S  ++
Sbjct: 306 NCSDLANDEYVALKLCTQSRALI 321

[Close]

BLAST of Carg19489 vs. TAIR10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 261.2 bits (666), Expect = 9.0e-70
Identity = 150/331 (45.32%), Postives = 216/331 (65.26%), Query Frame = 0


Query: 4   MFKYLVGSAGASGYGSKSTAEEVSESC-MNSITAIVTGATSGIGEETARVLAKRGVRIII 63
           ++  + G  G SG+GS STAEEV++     ++TAI+TG T GIG ETARVL+KRG  ++I
Sbjct: 3   LYSLITGRRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVI 62

Query: 64  PARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLINN 123
            ARN+ AAE AK  I+ ++    ++R+T++ LDLSS+ S+  F     +L+LPLNLLINN
Sbjct: 63  GARNMGAAENAKTEILRQN---ANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINN 122

Query: 124 AGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTS--NIH 183
           AG     +  SEDGIE+ FATN++GHFLLT LLL+ M  TAK++GV+GRI+NV+S  +I+
Sbjct: 123 AGVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIY 182

Query: 184 SWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPG 243
           ++  G  F+ +  I      Y   RAY  SKLAN+LH  +L+ +LQE   N+T N VHPG
Sbjct: 183 TYQEGIQFDSINDICS----YSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPG 242

Query: 244 VVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCND 303
           ++ TNL +     +  L F+      L K IP+GAAT+CYVA + +V+ V G YFADCN+
Sbjct: 243 LILTNLFQHTALLMRFLKFF---SFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNE 302

Query: 304 QGSCECKTKSAHLAEGLWSASETIVSTLTGK 332
               +   +   LA+ LW  S  ++++++ K
Sbjct: 303 VTPSKL-ARDETLAQKLWDFSVKLINSVSKK 322

[Close]

BLAST of Carg19489 vs. TAIR10
Match: AT2G37540.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 3.9e-65
Identity = 144/327 (44.04%), Postives = 208/327 (63.61%), Query Frame = 0


Query: 4   MFKYLVGSAGASGYGSKSTAEEVSESC-MNSITAIVTGATSGIGEETARVLAKRGVRIII 63
           ++  + G  G SG+GS STAE+V+++   + +TAI+TG TSGIG E ARVLA RG  +II
Sbjct: 3   IYGVMTGKKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVII 62

Query: 64  PARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLINN 123
            ARN KAA E+K  I+  +    ++R+  + +D+SS+ SV +F     +LN+PLN+LINN
Sbjct: 63  AARNPKAANESKEMILQMN---PNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINN 122

Query: 124 AGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIHSW 183
           AG        +EDGIE  FATN++GHFLLT LLL++M  TA+ +GVQGRIVN++S  H++
Sbjct: 123 AGVMFCPFKLTEDGIESQFATNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTY 182

Query: 184 FSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPGVV 243
              +  ++ G        Y   RAY  SKL+N+LH+  L+ +LQE   N+T+N VHPG+V
Sbjct: 183 TYSEGIKFQGINDPAG--YSERRAYGQSKLSNLLHSNALSRRLQEEGVNITINSVHPGLV 242

Query: 244 KTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCNDQG 303
            TNL R   GF   +  + A      K IP+GAAT+CYVA + ++E V G YF DCN   
Sbjct: 243 TTNLFR-YSGF--SMKVFRAMTFLFWKNIPQGAATTCYVALHPDLEGVTGKYFGDCNIVA 302

Query: 304 SCECKTKSAHLAEGLWSASETIVSTLT 330
             +  T ++ LA+ LW  S  ++ +++
Sbjct: 303 PSKFATNNS-LADKLWDFSVFLIDSIS 320

[Close]

BLAST of Carg19489 vs. Swiss-Prot
Match: sp|A2RVM0|TIC32_ARATH (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.1e-59
Identity = 143/328 (43.60%), Postives = 197/328 (60.06%), Query Frame = 0


Query: 7   YLVGSAGASGYGSKSTAEEVSESCMNS-ITAIVTGATSGIGEETARVLAKRGVRIIIPAR 66
           +  GS GASG+ S+STAEEV+     + +TAIVTGA+SGIG ETARVL+ RGV +++  R
Sbjct: 2   WFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVR 61

Query: 67  NLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLINNAGR 126
           N  +  + K  IV +      +++ VM LDLSS+ SV  F    +S  LPLNLLINNAG 
Sbjct: 62  NTDSGAKVKEDIVKQ---VPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGI 121

Query: 127 FCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH--SWF 186
                  S+D IE+ FATN+LGHFLLTKLLL+ M  T++ +  +GRIVN++S  H  S+ 
Sbjct: 122 MACPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYP 181

Query: 187 SGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPGVVK 246
            G  F+ +   S     Y S RAY  SKL NVLH  +L  +L+E   N+T N +HPG + 
Sbjct: 182 EGVRFDKINDKSS----YSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIM 241

Query: 247 TNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCNDQGS 306
           TNL R    ++   +  +A    +LK++P+GAAT+CYVA N  V  V+G YF D N    
Sbjct: 242 TNLGRYFNPYLAVAVGAVA--KYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKP 301

Query: 307 CECKTKSAHLAEGLWSASETIVSTLTGK 332
                K   LA+ +W  S  +  + +G+
Sbjct: 302 LPL-VKDTELAKKVWDFSTKLTDSQSGE 319

[Close]

BLAST of Carg19489 vs. Swiss-Prot
Match: sp|Q6RVV4|TIC32_PEA (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.7e-54
Identity = 135/316 (42.72%), Postives = 185/316 (58.54%), Query Frame = 0


Query: 13  GASGYGSKSTAEEVSESC-MNSITAIVTGATSGIGEETARVLAKRGVRIIIPARNLKAAE 72
           G SG+   STAE+V+       +TAIVTGA+SGIG ET RVLA RG  +I+  RN+ AA+
Sbjct: 9   GVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAAK 68

Query: 73  EAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLINNAGRFCYEHA 132
           + K  I+ +      +++  + LDLSS++SV  F     S   PLN+LINNAG       
Sbjct: 69  DVKDTILKD---IPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFK 128

Query: 133 FSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIH--SWFSGDIFE 192
            S+D IE+ FATN++GHFLLT LLL+ M +T + +  +GRIVNV S  H  ++  G  F+
Sbjct: 129 LSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFD 188

Query: 193 YLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPGVVKTNLNRE 252
            +   S     Y++ RAY  SKLANVLH  QL   L+E   N+T N +HPG + TNL R 
Sbjct: 189 KINDQSS----YNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFRH 248

Query: 253 REGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCNDQGSCECKTK 312
               V  LI  +     +LK + +GAAT+CYVA +  V+ V+G YF+D N   +     K
Sbjct: 249 NSA-VNGLINVIG--KLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTP-HGK 308

Query: 313 SAHLAEGLWSASETIV 326
              LA+ LW  S  +V
Sbjct: 309 DVDLAKKLWDFSINLV 313

[Close]

BLAST of Carg19489 vs. Swiss-Prot
Match: sp|Q9HBH5|RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.7e-38
Identity = 118/310 (38.06%), Postives = 168/310 (54.19%), Query Frame = 0


Query: 31  MNSITAIVTGATSGIGEETARVLAKRGVRIIIPARNLKAAEEAKARIVSE----SDCFDH 90
           M+  T ++TGA SG+G  TA  L + G R+I+  R+   AEEA  ++  E    ++C   
Sbjct: 41  MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPE 100

Query: 91  ------SRITVMALDLSSVNSVVNFXXXXESLNLPLNLLINNAGRFCYEHAFSEDGIEMT 150
                   + V  LDL+S+ SV  F          L++LINNAG F   +  +EDG EM 
Sbjct: 101 PGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQ 160

Query: 151 FATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIHSWFSGDI-FEYLGQISQKNR 210
           F  N+LGHFLLT LLL  +  +A S     RIV V+S ++ +  GDI F+ L       +
Sbjct: 161 FGVNHLGHFLLTNLLLGLLKSSAPS-----RIVVVSSKLYKY--GDINFDDL----NSEQ 220

Query: 211 VYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPGVVKTNLNRE-REGFVTDLI 270
            Y+ +  Y+ SKLAN+L T +LA +L+    NVTVN +HPG+V+TNL R      +   +
Sbjct: 221 SYNKSFCYSRSKLANILFTRELARRLE--GTNVTVNVLHPGIVRTNLGRHIHIPLLVKPL 280

Query: 271 FYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCNDQGSCECKTKSAHLAEGLW 329
           F + S +   KT  EGA TS Y+A++  VE V+G YF DC ++     K     +A  LW
Sbjct: 281 FNLVSWA-FFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLP-KAMDESVARKLW 335

[Close]

BLAST of Carg19489 vs. Swiss-Prot
Match: sp|Q9ERI6|RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus OX=10090 GN=Rdh14 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.7e-38
Identity = 119/308 (38.64%), Postives = 168/308 (54.55%), Query Frame = 0


Query: 31  MNSITAIVTGATSGIGEETARVLAKRGVRIIIPARNLKAAEEAKARIVSE--------SD 90
           M+  T ++TGA SG+G  TA  L + G R+I+  R+   AEEA  ++  E         D
Sbjct: 42  MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPD 101

Query: 91  CFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNLLINNAGRFCYEHAFSEDGIEMTFA 150
             D  ++ V  LDL+S+ SV  F          L++LINNAG F   +  +EDG EM F 
Sbjct: 102 GTD-GQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFG 161

Query: 151 TNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSNIHSWFSGDI-FEYLGQISQKNRVY 210
            N+LGHFLLT LLL  +  +A S     RIV V+S ++ +  G+I FE L       + Y
Sbjct: 162 VNHLGHFLLTNLLLGLLKSSAPS-----RIVVVSSKLYKY--GEINFEDL----NSEQSY 221

Query: 211 DSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVHPGVVKTNLNRE-REGFVTDLIFY 270
           + +  Y+ SKLAN+L T +LA +L+    NVTVN +HPG+V+TNL R      +   +F 
Sbjct: 222 NKSFCYSRSKLANILFTRELARRLE--GTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFN 281

Query: 271 MASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADCNDQGSCECKTKSAHLAEGLWSA 329
           + S +   KT  EGA TS Y+A + +VE V+G YF DC ++     K     +A  LW  
Sbjct: 282 LVSWA-FFKTPLEGAQTSIYLACSPDVEGVSGRYFGDCKEEELLP-KAMDESVARKLWDI 333

[Close]

BLAST of Carg19489 vs. Swiss-Prot
Match: sp|P59837|RDH12_BOVIN (Retinol dehydrogenase 12 OS=Bos taurus OX=9913 GN=RDH12 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-35
Identity = 108/289 (37.37%), Postives = 162/289 (56.06%), Query Frame = 0


Query: 37  IVTGATSGIGEETARVLAKRGVRIIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDL 96
           ++TGA +GIG+ETAR LA+RG R+ I  R++   E A + I +++    +S++ V  LDL
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADT---KNSQVLVRKLDL 102

Query: 97  SSVNSVVNFXXXXESLNLPLNLLINNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLL 156
           S   S+  F     +    L++LINNAG     ++ + DG E   A N+LGHFLLT LLL
Sbjct: 103 SDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLL 162

Query: 157 NRMIETAKSTGVQGRIVNVTSNIHSWFSGDIFEYLGQIS----QKNRVYDSTRAYAFSKL 216
            R+ E+A +     R+VN++S  H         +LG+I     Q ++ Y+   AY  SKL
Sbjct: 163 GRLKESAPA-----RVVNLSSVAH---------HLGKIRFHDLQGDKYYNLGFAYCHSKL 222

Query: 217 ANVLHTVQLAHKLQEMKANVTVNCVHPGVVKTNLNREREGFVTDLIFYMASKSRLLKTIP 276
           ANVL T +LA +L+     VT   VHPG+V++ L   R  F+  L++ + S    LKT  
Sbjct: 223 ANVLFTRELAKRLK--GTGVTTYAVHPGIVRSKL--VRHSFLLCLLWRLFSP--FLKTTW 282

Query: 277 EGAATSCYVATNRNVENVNGNYFADCNDQGSCECKTKSAHLAEGLWSAS 322
           EGA TS + A    +E ++G YF+DC  +     + ++   AE LW+ S
Sbjct: 283 EGAQTSLHCALAEGLEPLSGKYFSDCK-KTWVSPRARNNKTAERLWNVS 307

[Close]

BLAST of Carg19489 vs. TrEMBL
Match: tr|A0A1S3BLF4|A0A1S3BLF4_CUCME (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491110 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 4.9e-155
Identity = 284/340 (83.53%), Postives = 309/340 (90.88%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESC--MNSITAIVTGATSGIGEETARVLAKRGV 60
           MLEM KYLVGSAGASGYGS STAEEV++S   +NSITAIVTGATSGIGEETARVLAKRG 
Sbjct: 1   MLEMLKYLVGSAGASGYGSNSTAEEVTQSSTHLNSITAIVTGATSGIGEETARVLAKRGA 60

Query: 61  RIIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNL 120
           RI+IPARNLKAAEEAKARIVSE +CFD+SRITVM LDLSS+NSV+NF    E+LNLPLNL
Sbjct: 61  RIVIPARNLKAAEEAKARIVSELECFDYSRITVMVLDLSSLNSVMNFVSEFEALNLPLNL 120

Query: 121 LINNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSN 180
           LINNAGRFCYEHA SEDGIEMTFATNYLGHFLLTKLLLN+MIETAKSTG+QGRIVNVTSN
Sbjct: 121 LINNAGRFCYEHATSEDGIEMTFATNYLGHFLLTKLLLNKMIETAKSTGIQGRIVNVTSN 180

Query: 181 IHSWFSGDIFEYLGQISQ----KNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTV 240
           IHSWFSGDIFEYL QIS+     NR YD+TRAY+FSKLAN+LHTVQLAH+LQEMKANVTV
Sbjct: 181 IHSWFSGDIFEYLSQISRNYNNNNREYDATRAYSFSKLANLLHTVQLAHRLQEMKANVTV 240

Query: 241 NCVHPGVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNY 300
           NCVHPGVV+TNLNR+REGF+ DLIF+MASKS+LLKTIP+ AATSCYVAT+R VENVNG Y
Sbjct: 241 NCVHPGVVRTNLNRDREGFLKDLIFFMASKSKLLKTIPQSAATSCYVATHRKVENVNGKY 300

Query: 301 FADCNDQGSCECKTKSAHLAEGLWSASETIVSTLTGKPQP 335
           F DCN+QGSCE  TKSAHLAE LWSASE I+S LTG PQP
Sbjct: 301 FEDCNEQGSCESNTKSAHLAERLWSASEIIISNLTGNPQP 340

[Close]

BLAST of Carg19489 vs. TrEMBL
Match: tr|A0A1R3IB47|A0A1R3IB47_COCAP (Short-chain dehydrogenase/reductase SDR OS=Corchorus capsularis OX=210143 GN=CCACVL1_13385 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 4.8e-118
Identity = 228/329 (69.30%), Postives = 271/329 (82.37%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESC--MNSITAIVTGATSGIGEETARVLAKRGV 60
           MLE  KYL+GS GASG+GSKSTAE+V+E+   + SITAI+TGATSGIG ETARVLAKRG 
Sbjct: 1   MLETVKYLIGSRGASGFGSKSTAEQVTETSPDLRSITAIITGATSGIGAETARVLAKRGA 60

Query: 61  RIIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNL 120
           R+++PARNLKAAEEAKARIVSE   F  S I VMALDLSS++SV  F    ESLNLPLNL
Sbjct: 61  RLVLPARNLKAAEEAKARIVSE---FPGSEIVVMALDLSSLSSVRQFVAEFESLNLPLNL 120

Query: 121 LINNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSN 180
           LINNAG+F +EHA SEDGIEMTFATNYLGHFLLTKLLLN MI+TAK TGVQGRIVNV+S 
Sbjct: 121 LINNAGKFAHEHAISEDGIEMTFATNYLGHFLLTKLLLNNMIKTAKETGVQGRIVNVSSM 180

Query: 181 IHSWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVH 240
           +H WFSGD+  YLGQIS+  R YD+TRAYA SKLANVLHT +LA +L+++ ANVTVNCVH
Sbjct: 181 VHGWFSGDMIRYLGQISRSKRSYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVH 240

Query: 241 PGVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADC 300
           PG+V+T L REREG +TDL+F++ASK  LLKTIP+ AAT+CYVAT+  + NV+G YFADC
Sbjct: 241 PGIVRTRLTREREGLITDLVFFLASK--LLKTIPQAAATTCYVATHPRLVNVSGKYFADC 300

Query: 301 NDQGSCECKTKSAHLAEGLWSASETIVST 328
           N+  + +  + S + A  LW+ASE +VST
Sbjct: 301 NEAWTSKLGSNS-NEASRLWAASEIMVST 323

[Close]

BLAST of Carg19489 vs. TrEMBL
Match: tr|A0A1Q3BL03|A0A1Q3BL03_CEPFO (Adh_short domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12200 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.4e-117
Identity = 223/329 (67.78%), Postives = 274/329 (83.28%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESC--MNSITAIVTGATSGIGEETARVLAKRGV 60
           M+E  KYL+GS GASGYGSKSTAE+V+ +C  ++SITAI+TGATSGIG ETARVLAKRG 
Sbjct: 1   MVETVKYLIGSVGASGYGSKSTAEQVTGNCPDLSSITAIITGATSGIGAETARVLAKRGA 60

Query: 61  RIIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNL 120
           R+++PAR+LKAAEEAKARIVSE   F  S I V+ALDLSS+NSV  F    ESLNLPLNL
Sbjct: 61  RLVLPARSLKAAEEAKARIVSE---FPDSHIIVLALDLSSLNSVRLFVAEFESLNLPLNL 120

Query: 121 LINNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSN 180
           LINNAG+F +EHA SEDGIEMTFATNYLGHFLLTK+L+N+M ETAK TG+QGRIVNV+S 
Sbjct: 121 LINNAGKFAHEHAISEDGIEMTFATNYLGHFLLTKMLVNKMSETAKETGIQGRIVNVSSG 180

Query: 181 IHSWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVH 240
           IH+WFSGD+ +YL +I++ N  YD+TRAYA SKLANVLHT +LAH+L+EM+ANVTVNCVH
Sbjct: 181 IHTWFSGDMIQYLAEITRNNCHYDATRAYALSKLANVLHTKELAHRLKEMEANVTVNCVH 240

Query: 241 PGVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADC 300
           PG+V+T L REREG +TDL+F++ASK  L+KTIP+ AAT+CYVAT+  + NV+G YF+DC
Sbjct: 241 PGIVRTRLTREREGLITDLLFFLASK--LVKTIPQAAATTCYVATHPRLLNVSGKYFSDC 300

Query: 301 NDQGSCECKTKSAHLAEGLWSASETIVST 328
           N+  + +    S+  A  LWSASE +VS+
Sbjct: 301 NEAWTSKLGANSSEAAR-LWSASEIMVSS 323

[Close]

BLAST of Carg19489 vs. TrEMBL
Match: tr|A0A0D2PB19|A0A0D2PB19_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G131000 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 3.1e-117
Identity = 223/328 (67.99%), Postives = 269/328 (82.01%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESC--MNSITAIVTGATSGIGEETARVLAKRGV 60
           MLE  KYL+GS G SG+GSKSTAEEV+E+C  + SITAI+TGATSGIG ETARVLAKRG 
Sbjct: 1   MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITAIITGATSGIGAETARVLAKRGA 60

Query: 61  RIIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNL 120
           R+++PARNLKAAEEAKARIVSE   F  S I VMALDLSS+ SV NF    ESLNLP+N+
Sbjct: 61  RLVLPARNLKAAEEAKARIVSE---FPESEIIVMALDLSSLTSVRNFVSELESLNLPVNI 120

Query: 121 LINNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSN 180
           LINNAG+F +EHA SEDGIEMTFATNYLGHFLLTKLLLN M++TAK TGV GRIVNV+S+
Sbjct: 121 LINNAGKFAHEHAISEDGIEMTFATNYLGHFLLTKLLLNTMMKTAKQTGVPGRIVNVSSS 180

Query: 181 IHSWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVH 240
           IH WFSGD+  Y+GQIS+    YD+TRAYA SKLANVLHT +LA +L+++ ANVTVNCVH
Sbjct: 181 IHGWFSGDMIRYIGQISRSKSQYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVH 240

Query: 241 PGVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADC 300
           PG+V+T L REREG +TDL+F++ASK  LLKTIP+ AAT+CYVAT+  + N++G YFADC
Sbjct: 241 PGIVRTRLTREREGLITDLVFFLASK--LLKTIPQAAATTCYVATHPRLLNISGKYFADC 300

Query: 301 NDQGSCECKTKSAHLAEGLWSASETIVS 327
           N+  + +  + S   A+ LW+ASE +VS
Sbjct: 301 NEAWTSKLGSNSNEAAK-LWAASEIMVS 322

[Close]

BLAST of Carg19489 vs. TrEMBL
Match: tr|A0A2P5WX93|A0A2P5WX93_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA24946 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 5.3e-117
Identity = 227/330 (68.79%), Postives = 270/330 (81.82%), Query Frame = 0


Query: 1   MLEMFKYLVGSAGASGYGSKSTAEEVSESC--MNSITAIVTGATSGIGEETARVLAKRGV 60
           MLE  KYL+GS GASG+GSKSTAEEV+E+C  + SITAI+TGATSGIG ETARVLAKRG 
Sbjct: 1   MLETVKYLIGSRGASGFGSKSTAEEVTETCPDLRSITAIITGATSGIGAETARVLAKRGA 60

Query: 61  RIIIPARNLKAAEEAKARIVSESDCFDHSRITVMALDLSSVNSVVNFXXXXESLNLPLNL 120
           R++IPARNLKAA EAKARIVSE   F +S I +MALDLSS++SV  F    ESL+LPLNL
Sbjct: 61  RLVIPARNLKAAAEAKARIVSE---FPNSEIVIMALDLSSLSSVRKFVLDFESLDLPLNL 120

Query: 121 LINNAGRFCYEHAFSEDGIEMTFATNYLGHFLLTKLLLNRMIETAKSTGVQGRIVNVTSN 180
           LINNAGRF + HA SEDGIEMTFATNYLGHFLLTKLLLN+M+ETAK +GVQGRIVNV+S+
Sbjct: 121 LINNAGRFAHHHAISEDGIEMTFATNYLGHFLLTKLLLNKMMETAKQSGVQGRIVNVSSS 180

Query: 181 IHSWFSGDIFEYLGQISQKNRVYDSTRAYAFSKLANVLHTVQLAHKLQEMKANVTVNCVH 240
           I+ WFSGD+  YLGQIS+    YD+T AYA SKLANVLHT +LA +L+EM ANVTVNCVH
Sbjct: 181 INGWFSGDMIRYLGQISRSKSQYDATLAYALSKLANVLHTKELAQRLKEMGANVTVNCVH 240

Query: 241 PGVVKTNLNREREGFVTDLIFYMASKSRLLKTIPEGAATSCYVATNRNVENVNGNYFADC 300
           PG+V+T L REREGF+TDL F +ASK  LLKTIP+ A+T+CYVAT+  +ENV+G YFADC
Sbjct: 241 PGIVRTRLTREREGFITDLFFILASK--LLKTIPQAASTTCYVATHPRLENVSGKYFADC 300

Query: 301 NDQGSCECKTKSAHLAEGLWSASETIVSTL 329
           N+  + +  + S   A  LW+ASE +VS +
Sbjct: 301 NETWTSKLGSDSIE-ASKLWTASEIMVSEI 324

The following BLAST results are available for this feature:

BLAST of Carg19489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923251.1	5.5e-182	100.00	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita mosch...	[more]
XP_023552712.1	3.6e-181	99.40	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita pepo ...	[more]
XP_022923250.1	1.4e-180	99.70	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita mosch...	[more]
XP_023552711.1	8.8e-180	99.10	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo ...	[more]
XP_022965266.1	1.1e-177	97.01	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita maxim...	[more]

BLAST of Carg19489 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24050.1	2.2e-116	66.97	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G64590.1	9.5e-112	62.95	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G50130.1	4.5e-77	47.68	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G02540.1	9.0e-70	45.32	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G37540.1	3.9e-65	44.04	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Carg19489 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A2RVM0\|TIC32_ARATH	1.1e-59	43.60	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q6RVV4\|TIC32_PEA	8.7e-54	42.72	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
sp\|Q9HBH5\|RDH14_HUMAN	6.7e-38	38.06	Retinol dehydrogenase 14 OS=Homo sapiens OX=9606 GN=RDH14 PE=1 SV=1	[more]
sp\|Q9ERI6\|RDH14_MOUSE	8.7e-38	38.64	Retinol dehydrogenase 14 OS=Mus musculus OX=10090 GN=Rdh14 PE=1 SV=1	[more]
sp\|P59837\|RDH12_BOVIN	1.4e-35	37.37	Retinol dehydrogenase 12 OS=Bos taurus OX=9913 GN=RDH12 PE=2 SV=1	[more]

BLAST of Carg19489 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BLF4\|A0A1S3BLF4_CUCME	4.9e-155	83.53	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A1R3IB47\|A0A1R3IB47_COCAP	4.8e-118	69.30	Short-chain dehydrogenase/reductase SDR OS=Corchorus capsularis OX=210143 GN=CCA...	[more]
tr\|A0A1Q3BL03\|A0A1Q3BL03_CEPFO	1.4e-117	67.78	Adh_short domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v...	[more]
tr\|A0A0D2PB19\|A0A0D2PB19_GOSRA	3.1e-117	67.99	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G131000 PE=3 ...	[more]
tr\|A0A2P5WX93\|A0A2P5WX93_GOSBA	5.3e-117	68.79	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA24946 PE=3 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR002347	SDR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19489-RA	Carg19489-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 164..180 score: 27.08 coord: 230..247 score: 36.77 coord: 35..52 score: 46.16 coord: 114..125 score: 42.55 coord: 207..226 score: 30.23
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 35..179 e-value: 4.2E-25 score: 88.3
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 29..328 e-value: 7.2E-71 score: 240.6
None	No IPR available	PANTHER	PTHR24320	FAMILY NOT NAMED	coord: 6..329
None	No IPR available	PANTHER	PTHR24320:SF114	SUBFAMILY NOT NAMED	coord: 6..329
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 35..299

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19489	Cla008879	Watermelon (97103) v1	carwmB0425
Carg19489	Csa3G003470	Cucumber (Chinese Long) v2	carcuB0462
Carg19489	MELO3C013783	Melon (DHL92) v3.5.1	carmeB0437
Carg19489	ClCG10G000880	Watermelon (Charleston Gray)	carwcgB0421
Carg19489	CSPI03G00910	Wild cucumber (PI 183967)	carcpiB0467
Carg19489	Cucsa.322460	Cucumber (Gy14) v1	carcgyB0496
Carg19489	CmaCh06G005930	Cucurbita maxima (Rimu)	carcmaB0597
Carg19489	CmaCh16G012240	Cucurbita maxima (Rimu)	carcmaB0596
Carg19489	CmoCh06G005970	Cucurbita moschata (Rifu)	carcmoB0582
Carg19489	CmoCh16G012680	Cucurbita moschata (Rifu)	carcmoB0581
Carg19489	Lsi07G011200	Bottle gourd (USVL1VR-Ls)	carlsiB389
Carg19489	Cp4.1LG14g10120	Cucurbita pepo (Zucchini)	carcpeB0601
Carg19489	Cp4.1LG08g09130	Cucurbita pepo (Zucchini)	carcpeB0604
Carg19489	CsGy3G000850	Cucumber (Gy14) v2	carcgybB0438
Carg19489	MELO3C013783.2	Melon (DHL92) v3.6.1	carmedB0439
Carg19489	CsaV3_3G000960	Cucumber (Chinese Long) v3	carcucB0462
Carg19489	Cla97C10G185500	Watermelon (97103) v2	carwmbB0453
Carg19489	BhiUN179G11	Wax gourd	carwgoB0517

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19489	Carg16278	Silver-seed gourd	carcarB442

The following block(s) are covering this gene:

None