Cla008879 (gene) Watermelon (97103) v1

Overview
NameCla008879
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionShort-chain dehydrogenase/reductase family protein (AHRD V1 ***- D7M8Y3_ARALL); contains Interpro domain(s) IPR002198 Short-chain dehydrogenase/reductase SDR
LocationChr10 : 1430693 .. 1432916 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAATAAGATATGGTATAGCTTGGACTCATACTTTGGAGGTATGGACTAGGACCTGCTTTAATCTCATGCTCTCCTTTTACCTATACAATAAAAATAAAATAAAATATTCAATTTTTTTAATTTTAAAATAAAAAATAAAAAATTGGCACATGGGACATTGTTATTAGGTGTTGTCCGTGGTACAATTTTTTTTCCACTTTGGATGCATTCTAGAATGCAACTATTTTTGTGCATATAACTTTAATCACACAAACACAAAAAGTATTTAAAAAAAAAAAAAAAAAAGCTCAAAAGATTATTTTGGTCCATATTCTTTAGAATTTGTGTAAAATTTAGTTTATTATAGATTTTTATTTTTATTTATTTATTTATTTTATCTATTAACCTTTGTACTATACAACCAATTAATGGGAGTAATACCCCTAAGCTAAGATAGCGTATGAAATTTTTTGAAGATAAAAGTGTAGCATATGGAGCCCTATTTTAGTTTTTTCAGTTACAAAGATAGCAAACACGAAAACAGAAAAAACTGAGTTTCATTCACAGGGTGGATTGTTTCAATTCAGATTTCCCCATTCATTCACTTTTATTTTCCCCTACAAAAAAATTAATAATATAATAAAATTTTTAATTTCAATTTCATATTCCCCAAAACAAACTCATAACGTCTCCTCAAAGTCTCGGCCTCTTCCATTTCGCTTGCAATGCTCAAGTACCTCGTCGGCTCCGCCGGAGCAAGCGGCTAGGGCTCCAAATCCACCGCCGAAGAAGTCACTCAACCTTGTACTCATCTGAGTTCCATCACCGCCATAGTCACAGGTTATTTTATCTGAACTCCGAATTTTTATTCTGATTCTGATTCCATTACATTTCATTTTATTATTAACTCGCTAACAAATTTTGGCACAGGAGCGACGTCGGGAATCGGAGAGGAGACGGCGAGAGTCTTAGCTAAGCGCGGCGCGAGGATCATCATTCCGGCTCGCAACCTAAAAGCCGCCGAGGAAGCGAAGGCGAGAATCGAATTGGAATGTTTCGATCATTCACGAATCACGGTGATGGTTCTCGATCTTAGCTCTCTGAATTCCGTCATGAACTTCTTCTCCGAATTCGAGTCCTTAAATTTGCCTCTTAATCTCCTCATGTAATTCATTCAAAAACATCGCTAATTTCACTCCGTTGAATCGAACGAACGAATGACATTGAATTGATCAAAGAAACTAAAGCTCAGTTTCGTTTCTAATTTTCAGAAACAACGCAGGCAGGTTCTGTTACGAACATGCGATTTCTGAAGACGGAATTGAAAAGACCTTCGCTACTAATTATCTAGGCAAGAACATTATATAGAACAAATTTATTTTCATCTCCTTCAATCATGAGGCCTTTTACCATTATTGATCGAATCTATGAAATCGATAATGCAGGTCATTTTCTCTTGACGAAACTTCTGTTGAACAAGATGATAGAAACGGCCAAATCGACGAGAATCCAAGGCCGAATAGTGAATGTGACGTCCAACATCCACAGCTGGTTTTCCGGCGACTTATTCGAATATCTCAGCCAGATAAGCCGGAACAACAACAACAGGTACGATTGATTATCCTTTGCTTATGCATTAATGGCGCTCTGATCATAGCGATTCTGATAATCATTCGAAGCAGAGTGTACGACGCGACACGCGCTTATGCGTTCTCCAAGCTCGCAAATGTCTTGCACACCGTACAACTAGCTTACAGACTCCAGGTTTTCTTCCATAGATCATAATCATTGTTATTTTCATGGAATGATTTCAAGTCCGCTTTGGATATTGACAAAATCGAAACAGGAAATGAAGGCAAATGTTACGGTAAACTGTGTTCATCCGGGAGTTGTGAGAACCAATCTGAACAGAGATGGTGAAGGATTCATCACAGGTATTAATGATCAAATTAAAGCTTCTACATGGAAAGTATTCAATCTAAAAAGAACGAGAAACTGCAGATTTGATTTTCTACATGGCATCCAAATCAAAGTTGTTGAAGACAATTCCTCAAGGCGCAGCAACAAGTTGTTACGTAGCCACGAATCGAAACGTGGAAAATGTGAATGGAAAATATTTTGCGGATTGCAATGAACAAGGAAACTGTGAATCCAATACAAAATCAGCCCACTTGGCCGAACGCCTATGGTCCGCCTCTGAAACCATGGTCTCCACTTTAACTAGTAAGCCTCAACCCTAA

mRNA sequence

ATGTCAAATAAGATATGGTATAGCTTGGACTCATACTTTGGAGGAGCGACGTCGGGAATCGGAGAGGAGACGGCGAGAGTCTTAGCTAAGCGCGGCGCGAGGATCATCATTCCGGCTCGCAACCTAAAAGCCGCCGAGGAAGCGAAGGCGAGAATCGAATTGGAATGTTTCGATCATTCACGAATCACGGTGATGGTTCTCGATCTTAGCTCTCTGAATTCCGTCATGAACTTCTTCTCCGAATTCGAGTCCTTAAATTTGCCTCTTAATCTCCTCATGTCATTTTCTCTTGACGAAACTTCTGTTGAACAAGATGATAGAAACGGCCAAATCGACGAGAATCCAAGGCCGAATAGTGAATGTGACGTCCAACATCCACAGCTGGTTTTCCGGCGACTTATTCGAATATCTCAGCCAGATAAGCCGGAACAACAACAACAGGTACGATTGATTATCCTTTGCTTATGCATTAATGGCGCTCTGATCATAGCGATTCTGATAATCATTCGAAGCAGAGTGTACGACGCGACACGCGCTTATGCGTTCTCCAAGCTCGCAAATGTCTTGCACACCGTACAACTAGCTTACAGACTCCAGGAAATGAAGGCAAATGTTACGGTAAACTGTGTTCATCCGGGAGTTGTGAGAACCAATCTGAACAGAGATGGTGAAGGATTCATCACAGATTTGATTTTCTACATGGCATCCAAATCAAAGTTGTTGAAGACAATTCCTCAAGGCGCAGCAACAAGTTGTTACGTAGCCACGAATCGAAACGTGGAAAATGTGAATGGAAAATATTTTGCGGATTGCAATGAACAAGGAAACTGTGAATCCAATACAAAATCAGCCCACTTGGCCGAACGCCTATGGTCCGCCTCTGAAACCATGGTCTCCACTTTAACTAGTAAGCCTCAACCCTAA

Coding sequence (CDS)

ATGTCAAATAAGATATGGTATAGCTTGGACTCATACTTTGGAGGAGCGACGTCGGGAATCGGAGAGGAGACGGCGAGAGTCTTAGCTAAGCGCGGCGCGAGGATCATCATTCCGGCTCGCAACCTAAAAGCCGCCGAGGAAGCGAAGGCGAGAATCGAATTGGAATGTTTCGATCATTCACGAATCACGGTGATGGTTCTCGATCTTAGCTCTCTGAATTCCGTCATGAACTTCTTCTCCGAATTCGAGTCCTTAAATTTGCCTCTTAATCTCCTCATGTCATTTTCTCTTGACGAAACTTCTGTTGAACAAGATGATAGAAACGGCCAAATCGACGAGAATCCAAGGCCGAATAGTGAATGTGACGTCCAACATCCACAGCTGGTTTTCCGGCGACTTATTCGAATATCTCAGCCAGATAAGCCGGAACAACAACAACAGGTACGATTGATTATCCTTTGCTTATGCATTAATGGCGCTCTGATCATAGCGATTCTGATAATCATTCGAAGCAGAGTGTACGACGCGACACGCGCTTATGCGTTCTCCAAGCTCGCAAATGTCTTGCACACCGTACAACTAGCTTACAGACTCCAGGAAATGAAGGCAAATGTTACGGTAAACTGTGTTCATCCGGGAGTTGTGAGAACCAATCTGAACAGAGATGGTGAAGGATTCATCACAGATTTGATTTTCTACATGGCATCCAAATCAAAGTTGTTGAAGACAATTCCTCAAGGCGCAGCAACAAGTTGTTACGTAGCCACGAATCGAAACGTGGAAAATGTGAATGGAAAATATTTTGCGGATTGCAATGAACAAGGAAACTGTGAATCCAATACAAAATCAGCCCACTTGGCCGAACGCCTATGGTCCGCCTCTGAAACCATGGTCTCCACTTTAACTAGTAAGCCTCAACCCTAA

Protein sequence

MSNKIWYSLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNSVMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQHPQLVFRRLIRISQPDKPEQQQQVRLIILCLCINGALIIAILIIIRSRVYDATRAYAFSKLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKTIPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVSTLTSKPQP
Homology
[Close]
BLAST of Cla008879 vs. Swiss-Prot
Match: TIC32_PEA (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.5e-31
Identity = 103/295 (34.92%), Postives = 148/295 (50.17%), Query Frame = 1 

Query: 15  GATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNS 74
           GA+SGIG ET RVLA RGA +I+  RN+ AA++ K  I L+    +++  + LDLSSL+S
Sbjct: 37  GASSGIGAETTRVLALRGAHVIMGVRNMVAAKDVKDTI-LKDIPSAKVDAIELDLSSLDS 96

Query: 75  VMNFFSEFESLNLPLNLLMS--------FSLDETSVEQDDRNGQIDENPRPNSECDVQHP 134
           V  F SEF S   PLN+L++        F L + ++E       I               
Sbjct: 97  VKKFASEFNSSGRPLNILINNAGIMACPFKLSKDNIELQFATNHIGH------------- 156

Query: 135 QLVFRRLIRISQPDKPEQQQQVRLIILCLCINGALI---IAILIIIRSRVYDATRAYAFS 194
            L+   L+   +    E +++ R++ +    +       I    I     Y+  RAY  S
Sbjct: 157 FLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKINDQSSYNNWRAYGQS 216

Query: 195 KLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKT 254
           KLANVLH  QL   L+E   N+T N +HPG + TNL R     +  LI  +     +LK 
Sbjct: 217 KLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFRHNSA-VNGLINVIG--KLVLKN 276

Query: 255 IPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMV 299
           + QGAAT+CYVA +  V+ V+G+YF+D N       + K   LA++LW  S  +V
Sbjct: 277 VQQGAATTCYVALHPQVKGVSGEYFSDSNVY-KTTPHGKDVDLAKKLWDFSINLV 313

[Close]
BLAST of Cla008879 vs. Swiss-Prot
Match: TIC32_ARATH (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30
Identity = 96/297 (32.32%), Postives = 148/297 (49.83%), Query Frame = 1 

Query: 15  GATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNS 74
           GA+SGIG ETARVL+ RG  +++  RN  +  + K  I ++    +++ VM LDLSS+ S
Sbjct: 36  GASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDI-VKQVPGAKLDVMELDLSSMQS 95

Query: 75  VMNFFSEFESLNLPLNLLMS--------FSLDETSVEQDDRNGQIDENPRPNSECDVQHP 134
           V  F SE++S  LPLNLL++        F L + ++E       +               
Sbjct: 96  VRKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGH------------- 155

Query: 135 QLVFRRLIRISQPDKPEQQQQVRLIILCLCINGALI---IAILIIIRSRVYDATRAYAFS 194
            L+ + L+   +    E +++ R++ L    +       +    I     Y + RAY  S
Sbjct: 156 FLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQS 215

Query: 195 KLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKT 254
           KL NVLH  +L  +L+E   N+T N +HPG + TNL R    ++   +  +A    +LK+
Sbjct: 216 KLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVA--KYILKS 275

Query: 255 IPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVST 301
           +PQGAAT+CYVA N  V  V+G+YF D N         K   LA+++W  S  +  +
Sbjct: 276 VPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPL-VKDTELAKKVWDFSTKLTDS 315

[Close]
BLAST of Cla008879 vs. Swiss-Prot
Match: RDH12_MOUSE (Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.7e-21
Identity = 87/280 (31.07%), Postives = 134/280 (47.86%), Query Frame = 1 

Query: 15  GATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNS 74
           GA +GIG+ETAR LA+RGAR+ I  R++   E A + I  +   +S++ V  LDLS   S
Sbjct: 46  GANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADT-KNSQVLVRKLDLSDTKS 105

Query: 75  VMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQHPQLVFRRLI 134
           +  F   F +    L++L    ++   V     +   D          + H  L +  L 
Sbjct: 106 IRAFAERFLAEEKKLHIL----INNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLE 165

Query: 135 RISQPDKPEQQQQVRLIILCLCINGALIIAILIIIRSRVYDATRAYAFSKLANVLHTVQL 194
           R+      ++    R++ L    +    I    +   + Y +  AY  SKLAN+L T +L
Sbjct: 166 RL------KESAPARVVNLSSIAHLIGKIRFHDLQGQKRYCSAFAYGHSKLANLLFTREL 225

Query: 195 AYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKTIPQGAATSCYV 254
           A RLQ     VT   VHPGVV + + R+   ++  L++ +   S   K+  QGA TS + 
Sbjct: 226 AKRLQ--GTGVTAYAVHPGVVLSEITRN--SYLLCLLWRLF--SPFFKSTSQGAQTSLHC 285

Query: 255 ATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSAS 295
           A   ++E ++GKYF+DC       S  ++   AERLW+ S
Sbjct: 286 ALAEDLEPLSGKYFSDCKRMW-VSSRARNKKTAERLWNVS 307

[Close]
BLAST of Cla008879 vs. Swiss-Prot
Match: WWOX_CHICK (WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 5.7e-20
Identity = 91/306 (29.74%), Postives = 142/306 (46.41%), Query Frame = 1 

Query: 15  GATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNS 74
           GA SGIG ETA+  A  GA +I+  RN+    +A  RI LE +  +++  M LDL+SL S
Sbjct: 131 GANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQRI-LEEWHKAKVEAMTLDLASLRS 190

Query: 75  VMNFFSEFESLNLPLNLLM--------SFSLDETSVEQDDRNGQIDENPRPNSECDVQHP 134
           V NF   F+S N+PL++L+        S+ L E  +E   +   +             H 
Sbjct: 191 VQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLESTFQVNHLG------------HF 250

Query: 135 QLV--FRRLIRISQPDKPEQQQQVRLIILCLCINGALIIAILIIIRSRVYDATRAYAFSK 194
            LV     ++R S P +             +  +   +   L+    + Y A  AY  SK
Sbjct: 251 YLVQLLEDILRRSSPARVVVVSSESHRFTEIKDSSGKLDFSLLSPSKKEYWAMLAYNRSK 310

Query: 195 LANVLHTVQLAYRLQEMKANVTVNCVHPG-VVRTNLNRDGEGFITDLIFYMASKSKLLKT 254
           L N+L + +L  RL      VT N VHPG ++ ++++R+   ++  L+F +A      K+
Sbjct: 311 LCNILFSNELNRRLS--PHGVTSNSVHPGNMIYSSIHRN--WWVYTLLFTLA--RPFTKS 370

Query: 255 IPQGAATSCYVATNRNVENVNGKYFADCNEQGNC--ESNTKSAHLAERLWSASETMVSTL 308
           + QGAAT+ Y AT   +E + G YF +C     C   +  ++   A  LW  SE ++   
Sbjct: 371 MQQGAATTVYCATAAELEGLGGMYFNNC---CRCLPSAEARNELTAVALWELSERLIREQ 414

[Close]
BLAST of Cla008879 vs. Swiss-Prot
Match: RDH12_HUMAN (Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3)

HSP 1 Score: 99.4 bits (246), Expect = 7.4e-20
Identity = 89/282 (31.56%), Postives = 129/282 (45.74%), Query Frame = 1 

Query: 15  GATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNS 74
           GA +GIG+ETAR LA RGAR+ I  R++   E A + I ++   +S++ V  LDLS   S
Sbjct: 46  GANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDT-KNSQVLVRKLDLSDTKS 105

Query: 75  VMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQHPQLVFRRL- 134
           +  F   F +    L++L    ++   V     +   D          + H  L +  L 
Sbjct: 106 IRAFAEGFLAEEKQLHIL----INNAGVMMCPYSKTADGFETHLGVNHLGHFLLTYLLLE 165

Query: 135 -IRISQPDKPEQQQQVRLIILCLCINGALIIAILIIIRSRVYDATRAYAFSKLANVLHTV 194
            +++S P         R++ +    +    I    +   + Y    AY  SKLANVL T 
Sbjct: 166 RLKVSAP--------ARVVNVSSVAHHIGKIPFHDLQSEKRYSRGFAYCHSKLANVLFTR 225

Query: 195 QLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKTIPQGAATSC 254
           +LA RLQ     VT   VHPGVVR+ L R      + L       S  +KT  +GA TS 
Sbjct: 226 ELAKRLQ--GTGVTTYAVHPGVVRSELVRHS----SLLCLLWRLFSPFVKTAREGAQTSL 285

Query: 255 YVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSAS 295
           + A    +E ++GKYF+DC          ++   AERLW+ S
Sbjct: 286 HCALAEGLEPLSGKYFSDCKRTW-VSPRARNNKTAERLWNVS 307

[Close]
BLAST of Cla008879 vs. TrEMBL
Match: A0A0A0L3R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G003470 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 2.2e-143
Identity = 268/303 (88.45%), Postives = 280/303 (92.41%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARI--ELECFDHSRITVM 67
           S+ +   GATSGIGEETARVLAK GARI+IPARNLKAAEEAKARI  ELECFDHSRITVM
Sbjct: 35  SITAIVTGATSGIGEETARVLAKGGARIVIPARNLKAAEEAKARIVSELECFDHSRITVM 94

Query: 68  VLDLSSLNSVMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQH 127
           VLDLSSLNSVMNF SEFESLNLPLNLLMSFSLDETSVEQDDRNG+ID NPRPNSECDVQH
Sbjct: 95  VLDLSSLNSVMNFVSEFESLNLPLNLLMSFSLDETSVEQDDRNGRIDGNPRPNSECDVQH 154

Query: 128 PQLVFRRLIRISQPDKPEQQQ-QVRLIILCLCINGALIIAILIIIRSRVYDATRAYAFSK 187
           PQLVFRR IRISQPDKPEQQQ QVRLI+L LCINGA II ILIII+SR YDATRAYAFSK
Sbjct: 155 PQLVFRRRIRISQPDKPEQQQVQVRLILLSLCINGAPIIVILIIIQSREYDATRAYAFSK 214

Query: 188 LANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKTI 247
           LAN+LHTVQLA+RLQEMKANVTVNCVHPGVVRTNLNRD EGFI DLIF+MASKSKLLKTI
Sbjct: 215 LANLLHTVQLAHRLQEMKANVTVNCVHPGVVRTNLNRDREGFIKDLIFFMASKSKLLKTI 274

Query: 248 PQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVSTLTSK 307
           PQ AATSCYVAT+R VENVNGKYFADCNEQG+CESNTKSAHLAERLWS SE +VS LT K
Sbjct: 275 PQSAATSCYVATHRKVENVNGKYFADCNEQGSCESNTKSAHLAERLWSTSEIIVSNLTGK 334

[Close]
BLAST of Cla008879 vs. TrEMBL
Match: A0A0A0KKE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G149870 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-66
Identity = 160/298 (53.69%), Postives = 197/298 (66.11%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVL 67
           S  +   GATSGIG ETAR+LAKRGAR+I+P+RN+KAAEE KARIE EC D S I VM L
Sbjct: 33  SFTAIITGATSGIGAETARILAKRGARLILPSRNIKAAEETKARIESECSD-SEIIVMSL 92

Query: 68  DLSSLNSVMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQHPQ 127
           DLSSL+SV  F S+FESLNLPLNLL++ +  + S E       I+     N        +
Sbjct: 93  DLSSLSSVRTFVSQFESLNLPLNLLIN-NAGKFSHEHAITEDGIEMTFATNYLGHFLLTK 152

Query: 128 LVFRRLIRISQPDKPEQQQQVRLIILCLCINGALIIAILIII------RSRVYDATRAYA 187
           L+  +++  ++    E     R++ +   I+G     IL  +      +SR YDATRAYA
Sbjct: 153 LLVNKMVETAKVTGVEG----RIVNVSSSIHGWFSGDILKYLGQISRNKSRNYDATRAYA 212

Query: 188 FSKLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLL 247
            SKLANVLHT +LA R ++M ANVTVNCVHPG+VRT L RD EGFITDL+F+MA  SKLL
Sbjct: 213 LSKLANVLHTHELARRFKQMGANVTVNCVHPGIVRTRLTRDREGFITDLVFFMA--SKLL 272

Query: 248 KTIPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVS 300
           KTIPQ AAT+CYVATN  + +V GKYF DCNE    +    S   A RLWSASE MV+
Sbjct: 273 KTIPQAAATTCYVATNPRLRHVTGKYFVDCNESSPSKL-AGSPSEAARLWSASEIMVN 321

[Close]
BLAST of Cla008879 vs. TrEMBL
Match: I1KPN7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G026200 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.4e-65
Identity = 155/305 (50.82%), Postives = 198/305 (64.92%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVL 67
           S+ +   GATSGIG ETARVLAKRGAR+++PAR++KAAE+AKARI  EC D S I VM L
Sbjct: 35  SITAIITGATSGIGTETARVLAKRGARLVLPARSMKAAEDAKARIVSECPD-SEIIVMAL 94

Query: 68  DLSSLNSVMNFFSEFESLNLPLNLLMS--------FSLDETSVEQDDRNGQIDENPRPNS 127
           DLSSLNSV NF + F SL LPL+LL++         ++ E  VE       +      N 
Sbjct: 95  DLSSLNSVTNFVAHFHSLGLPLHLLINNAGKFAHEHAISEDGVEMTFATNYLGHFVMTN- 154

Query: 128 ECDVQHPQLVFRRLIRISQPDKPEQQQQVRLIILCLCING-----ALIIAILIIIRSRVY 187
                   L+ ++++  ++    E   Q R++ +   I+G     A+    LI    R Y
Sbjct: 155 --------LLVKKMVETAK----ETGVQGRIVNVSSSIHGWFSGDAISYLALISRNKRHY 214

Query: 188 DATRAYAFSKLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYM 247
           DATRAYA SKLANV HT +LA RLQ+M ANVTVNCVHPG+VRT L R+ EG +TDL+F++
Sbjct: 215 DATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGIVRTRLTREREGLLTDLVFFL 274

Query: 248 ASKSKLLKTIPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSAS 300
           A  SKLLKTIPQ AAT+CYVAT+  + NV+GKYFADCNE    +  + S   A RLW+AS
Sbjct: 275 A--SKLLKTIPQAAATTCYVATHPRLLNVSGKYFADCNETSTSKLGSNSTE-AARLWAAS 322

[Close]
BLAST of Cla008879 vs. TrEMBL
Match: A0A151RIL7_CAJCA (Retinol dehydrogenase 12 (Fragment) OS=Cajanus cajan GN=KK1_036278 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-65
Identity = 152/293 (51.88%), Postives = 199/293 (67.92%), Query Frame = 1 

Query: 15  GATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNS 74
           GATSGIG ETARVLAKRGAR+I+PAR++KAAE+AKARI  EC  HS I VM LDLSSLNS
Sbjct: 7   GATSGIGAETARVLAKRGARLILPARSVKAAEDAKARILSEC-PHSEIIVMPLDLSSLNS 66

Query: 75  VMNFFSEFESLNLPLNLLMSFS---LDETSVEQDDRNGQIDENPRPNSECDVQHPQLVFR 134
           V NF ++F SL LPL+LL++ +     E +V +D     ++     N        +L+ +
Sbjct: 67  VRNFVAQFHSLGLPLHLLINNAGKFAPEHAVSEDG----VEMTFATNYLGHFLLTKLLLK 126

Query: 135 RLIRISQPDKPEQQQQVRLIILCLCING-----ALIIAILIIIRSRVYDATRAYAFSKLA 194
           +++  ++    E   Q R++ +   I+G     A+   +LI      YDATRAYA SKLA
Sbjct: 127 KMVETAE----ETGVQGRIVNVSSSIHGWFSGDAISYLVLISRNKSHYDATRAYALSKLA 186

Query: 195 NVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKTIPQ 254
           NV HT +LA RL++M ANVTVNCVHPG+VRT L R+ EG +TDL+F++A  SKLLKTIPQ
Sbjct: 187 NVFHTKELARRLEQMGANVTVNCVHPGIVRTRLTREREGLLTDLVFFLA--SKLLKTIPQ 246

Query: 255 GAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVS 300
            AAT+CYVAT+  + NV+GKYFADCNE    +  + S   A RLW+ASE ++S
Sbjct: 247 AAATTCYVATHPRLSNVSGKYFADCNETSTSKLGSNSTE-ASRLWAASEFIIS 287

[Close]
BLAST of Cla008879 vs. TrEMBL
Match: B9RYQ7_RICCO (Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_1312690 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.1e-65
Identity = 154/300 (51.33%), Postives = 205/300 (68.33%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVL 67
           S+ +   GATSGIG ETARVLAK+GAR++IPAR++KAAEEAKARI  +    S I +M L
Sbjct: 34  SVTAIITGATSGIGAETARVLAKQGARLVIPARSMKAAEEAKARIMSDFKPESEIIIMAL 93

Query: 68  DLSSLNSVMNFFSEFESLNLPLNLLMSFS---LDETSVEQDDRNGQIDENPRPNSECDVQ 127
           DLSSLNSV NF +EFES NLPLNLL++ +     E ++ +D     I+     N      
Sbjct: 94  DLSSLNSVKNFVAEFESFNLPLNLLINNAGTFAHEHAISEDG----IEMTFATNYLGHFL 153

Query: 128 HPQLVFRRLIRISQPDKPEQQQQVRLIILCLCI----NGALIIAILIIIRSRV-YDATRA 187
             +L+ +++I  ++    E   Q R++ +   I    +G +I  +  I R++  YDATRA
Sbjct: 154 LTKLLLKKMIETAK----ETGVQGRIVNVSSSIHSWFSGDMIRYLGEISRNKCHYDATRA 213

Query: 188 YAFSKLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSK 247
           YA SKLAN+LHT +LA RL++M+ANVTVNCVHPG+VRT L R+ EG +TD++F+MA  SK
Sbjct: 214 YALSKLANILHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGILTDMVFFMA--SK 273

Query: 248 LLKTIPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVS 300
           LLKTIPQ AAT+C+VAT+  + NV+GKYFADCNE    +  + S   A +LWSASE MVS
Sbjct: 274 LLKTIPQAAATTCFVATSPRLLNVSGKYFADCNEASASKLGSSSTE-ASKLWSASEIMVS 322

[Close]
BLAST of Cla008879 vs. NCBI nr
Match: gi|700200546|gb|KGN55679.1| (hypothetical protein Csa_3G003470 [Cucumis sativus])

HSP 1 Score: 516.5 bits (1329), Expect = 3.1e-143
Identity = 268/303 (88.45%), Postives = 280/303 (92.41%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARI--ELECFDHSRITVM 67
           S+ +   GATSGIGEETARVLAK GARI+IPARNLKAAEEAKARI  ELECFDHSRITVM
Sbjct: 35  SITAIVTGATSGIGEETARVLAKGGARIVIPARNLKAAEEAKARIVSELECFDHSRITVM 94

Query: 68  VLDLSSLNSVMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQH 127
           VLDLSSLNSVMNF SEFESLNLPLNLLMSFSLDETSVEQDDRNG+ID NPRPNSECDVQH
Sbjct: 95  VLDLSSLNSVMNFVSEFESLNLPLNLLMSFSLDETSVEQDDRNGRIDGNPRPNSECDVQH 154

Query: 128 PQLVFRRLIRISQPDKPEQQQ-QVRLIILCLCINGALIIAILIIIRSRVYDATRAYAFSK 187
           PQLVFRR IRISQPDKPEQQQ QVRLI+L LCINGA II ILIII+SR YDATRAYAFSK
Sbjct: 155 PQLVFRRRIRISQPDKPEQQQVQVRLILLSLCINGAPIIVILIIIQSREYDATRAYAFSK 214

Query: 188 LANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKTI 247
           LAN+LHTVQLA+RLQEMKANVTVNCVHPGVVRTNLNRD EGFI DLIF+MASKSKLLKTI
Sbjct: 215 LANLLHTVQLAHRLQEMKANVTVNCVHPGVVRTNLNRDREGFIKDLIFFMASKSKLLKTI 274

Query: 248 PQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVSTLTSK 307
           PQ AATSCYVAT+R VENVNGKYFADCNEQG+CESNTKSAHLAERLWS SE +VS LT K
Sbjct: 275 PQSAATSCYVATHRKVENVNGKYFADCNEQGSCESNTKSAHLAERLWSTSEIIVSNLTGK 334

[Close]
BLAST of Cla008879 vs. NCBI nr
Match: gi|778699371|ref|XP_011654698.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucumis sativus])

HSP 1 Score: 260.8 bits (665), Expect = 3.1e-66
Identity = 160/298 (53.69%), Postives = 197/298 (66.11%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVL 67
           S  +   GATSGIG ETAR+LAKRGAR+I+P+RN+KAAEE KARIE EC D S I VM L
Sbjct: 33  SFTAIITGATSGIGAETARILAKRGARLILPSRNIKAAEETKARIESECSD-SEIIVMSL 92

Query: 68  DLSSLNSVMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQHPQ 127
           DLSSL+SV  F S+FESLNLPLNLL++ +  + S E       I+     N        +
Sbjct: 93  DLSSLSSVRTFVSQFESLNLPLNLLIN-NAGKFSHEHAITEDGIEMTFATNYLGHFLLTK 152

Query: 128 LVFRRLIRISQPDKPEQQQQVRLIILCLCINGALIIAILIII------RSRVYDATRAYA 187
           L+  +++  ++    E     R++ +   I+G     IL  +      +SR YDATRAYA
Sbjct: 153 LLVNKMVETAKVTGVEG----RIVNVSSSIHGWFSGDILKYLGQISRNKSRNYDATRAYA 212

Query: 188 FSKLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLL 247
            SKLANVLHT +LA R ++M ANVTVNCVHPG+VRT L RD EGFITDL+F+MA  SKLL
Sbjct: 213 LSKLANVLHTHELARRFKQMGANVTVNCVHPGIVRTRLTRDREGFITDLVFFMA--SKLL 272

Query: 248 KTIPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVS 300
           KTIPQ AAT+CYVATN  + +V GKYF DCNE    +    S   A RLWSASE MV+
Sbjct: 273 KTIPQAAATTCYVATNPRLRHVTGKYFVDCNESSPSKL-AGSPSEAARLWSASEIMVN 321

[Close]
BLAST of Cla008879 vs. NCBI nr
Match: gi|449452414|ref|XP_004143954.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 8.9e-66
Identity = 160/297 (53.87%), Postives = 195/297 (65.66%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVL 67
           S  +   GATSGIG ETAR+LAKRGAR+I+P+RN+KAAEE KARIE EC D S I VM L
Sbjct: 33  SFTAIITGATSGIGAETARILAKRGARLILPSRNIKAAEETKARIESECSD-SEIIVMSL 92

Query: 68  DLSSLNSVMNFFSEFESLNLPLNLLMSFSLDETSVEQDDRNGQIDENPRPNSECDVQHPQ 127
           DLSSL+SV  F S+FESLNLPLNLL++ +  + S E       I+     N        +
Sbjct: 93  DLSSLSSVRTFVSQFESLNLPLNLLIN-NAGKFSHEHAITEDGIEMTFATNYLGHFLLTK 152

Query: 128 LVFRRLIRISQPDKPEQQQQVRLIILCLCINGALIIAIL-----IIIRSRVYDATRAYAF 187
           L+  +++  ++    E     R++ +   I+G     IL     I    R YDATRAYA 
Sbjct: 153 LLVNKMVETAKVTGVEG----RIVNVSSSIHGWFSGDILKYLGQISRNKRNYDATRAYAL 212

Query: 188 SKLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLK 247
           SKLANVLHT +LA R ++M ANVTVNCVHPG+VRT L RD EGFITDL+F+MA  SKLLK
Sbjct: 213 SKLANVLHTHELARRFKQMGANVTVNCVHPGIVRTRLTRDREGFITDLVFFMA--SKLLK 272

Query: 248 TIPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVS 300
           TIPQ AAT+CYVATN  + +V GKYF DCNE    +    S   A RLWSASE MV+
Sbjct: 273 TIPQAAATTCYVATNPRLRHVTGKYFVDCNESSPSKL-AGSPSEAARLWSASEIMVN 320

[Close]
BLAST of Cla008879 vs. NCBI nr
Match: gi|356523777|ref|XP_003530511.1| (PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Glycine max])

HSP 1 Score: 258.1 bits (658), Expect = 2.0e-65
Identity = 155/305 (50.82%), Postives = 198/305 (64.92%), Query Frame = 1 

Query: 8   SLDSYFGGATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVL 67
           S+ +   GATSGIG ETARVLAKRGAR+++PAR++KAAE+AKARI  EC D S I VM L
Sbjct: 35  SITAIITGATSGIGTETARVLAKRGARLVLPARSMKAAEDAKARIVSECPD-SEIIVMAL 94

Query: 68  DLSSLNSVMNFFSEFESLNLPLNLLMS--------FSLDETSVEQDDRNGQIDENPRPNS 127
           DLSSLNSV NF + F SL LPL+LL++         ++ E  VE       +      N 
Sbjct: 95  DLSSLNSVTNFVAHFHSLGLPLHLLINNAGKFAHEHAISEDGVEMTFATNYLGHFVMTN- 154

Query: 128 ECDVQHPQLVFRRLIRISQPDKPEQQQQVRLIILCLCING-----ALIIAILIIIRSRVY 187
                   L+ ++++  ++    E   Q R++ +   I+G     A+    LI    R Y
Sbjct: 155 --------LLVKKMVETAK----ETGVQGRIVNVSSSIHGWFSGDAISYLALISRNKRHY 214

Query: 188 DATRAYAFSKLANVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYM 247
           DATRAYA SKLANV HT +LA RLQ+M ANVTVNCVHPG+VRT L R+ EG +TDL+F++
Sbjct: 215 DATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGIVRTRLTREREGLLTDLVFFL 274

Query: 248 ASKSKLLKTIPQGAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSAS 300
           A  SKLLKTIPQ AAT+CYVAT+  + NV+GKYFADCNE    +  + S   A RLW+AS
Sbjct: 275 A--SKLLKTIPQAAATTCYVATHPRLLNVSGKYFADCNETSTSKLGSNSTE-AARLWAAS 322

[Close]
BLAST of Cla008879 vs. NCBI nr
Match: gi|1012330827|gb|KYP42331.1| (Retinol dehydrogenase 12, partial [Cajanus cajan])

HSP 1 Score: 257.3 bits (656), Expect = 3.4e-65
Identity = 152/293 (51.88%), Postives = 199/293 (67.92%), Query Frame = 1 

Query: 15  GATSGIGEETARVLAKRGARIIIPARNLKAAEEAKARIELECFDHSRITVMVLDLSSLNS 74
           GATSGIG ETARVLAKRGAR+I+PAR++KAAE+AKARI  EC  HS I VM LDLSSLNS
Sbjct: 7   GATSGIGAETARVLAKRGARLILPARSVKAAEDAKARILSEC-PHSEIIVMPLDLSSLNS 66

Query: 75  VMNFFSEFESLNLPLNLLMSFS---LDETSVEQDDRNGQIDENPRPNSECDVQHPQLVFR 134
           V NF ++F SL LPL+LL++ +     E +V +D     ++     N        +L+ +
Sbjct: 67  VRNFVAQFHSLGLPLHLLINNAGKFAPEHAVSEDG----VEMTFATNYLGHFLLTKLLLK 126

Query: 135 RLIRISQPDKPEQQQQVRLIILCLCING-----ALIIAILIIIRSRVYDATRAYAFSKLA 194
           +++  ++    E   Q R++ +   I+G     A+   +LI      YDATRAYA SKLA
Sbjct: 127 KMVETAE----ETGVQGRIVNVSSSIHGWFSGDAISYLVLISRNKSHYDATRAYALSKLA 186

Query: 195 NVLHTVQLAYRLQEMKANVTVNCVHPGVVRTNLNRDGEGFITDLIFYMASKSKLLKTIPQ 254
           NV HT +LA RL++M ANVTVNCVHPG+VRT L R+ EG +TDL+F++A  SKLLKTIPQ
Sbjct: 187 NVFHTKELARRLEQMGANVTVNCVHPGIVRTRLTREREGLLTDLVFFLA--SKLLKTIPQ 246

Query: 255 GAATSCYVATNRNVENVNGKYFADCNEQGNCESNTKSAHLAERLWSASETMVS 300
            AAT+CYVAT+  + NV+GKYFADCNE    +  + S   A RLW+ASE ++S
Sbjct: 247 AAATTCYVATHPRLSNVSGKYFADCNETSTSKLGSNSTE-ASRLWAASEFIIS 287

The following BLAST results are available for this feature:
BLAST of Cla008879 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIC32_PEA5.5e-3134.92Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 S... [more]
TIC32_ARATH1.6e-3032.32Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32... [more]
RDH12_MOUSE6.7e-2131.07Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1[more]
WWOX_CHICK5.7e-2029.74WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2[more]
RDH12_HUMAN7.4e-2031.56Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3[more]
BLAST of Cla008879 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3R1_CUCSA2.2e-14388.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G003470 PE=4 SV=1[more]
A0A0A0KKE2_CUCSA2.1e-6653.69Uncharacterized protein OS=Cucumis sativus GN=Csa_5G149870 PE=3 SV=1[more]
I1KPN7_SOYBN1.4e-6550.82Uncharacterized protein OS=Glycine max GN=GLYMA_08G026200 PE=3 SV=1[more]
A0A151RIL7_CAJCA2.4e-6551.88Retinol dehydrogenase 12 (Fragment) OS=Cajanus cajan GN=KK1_036278 PE=3 SV=1[more]
B9RYQ7_RICCO3.1e-6551.33Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_1312690 PE=3 SV=... [more]
BLAST of Cla008879 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200546|gb|KGN55679.1|3.1e-14388.45hypothetical protein Csa_3G003470 [Cucumis sativus][more]
gi|778699371|ref|XP_011654698.1|3.1e-6653.69PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucu... [more]
gi|449452414|ref|XP_004143954.1|8.9e-6653.87PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucu... [more]
gi|356523777|ref|XP_003530511.1|2.0e-6550.82PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Glycine max][more]
gi|1012330827|gb|KYP42331.1|3.4e-6551.88Retinol dehydrogenase 12, partial [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla008879Cla008879.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 203..220
score: 5.3E-6coord: 10..27
score: 5.3E-6coord: 180..199
score: 5.
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 15..92
score: 4.
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 174..272
score: 2.1E-12coord: 15..92
score: 2.9
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 15..268
score: 2.09
NoneNo IPR availablePANTHERPTHR24320FAMILY NOT NAMEDcoord: 15..299
score: 4.1
NoneNo IPR availablePANTHERPTHR24320:SF72RETINOL DEHYDROGENASE 14coord: 15..299
score: 4.1