CmaCh04G028120 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G028120
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MYB-like DNA-binding domain protein
Location	Cma_Chr04 : 18829494 .. 18830573 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACAACAAGCTTTTTGTTGTTACATAGCAGAAGAAGCTGCAGCAGCAGCAGAAGAAGATATAAAAATGGATGCAGAAGAAAAAGAATGGAGGAAGGGGCCATGGACTCCTGAGGAAGACAAGTTGTTATCTGAATACGTGAAAGTGCATGGCGAAGGAAGATGGACTTCTGTTGCCACTGGTTCACGTAAAAACATATTCTCTTCCTTTTTTTTTTTTTCCTCTAAACTAGAAGATTAGAGTTAAAGATGTAAAATCAATCTTTTTCAGGCTTGAATAGAACAGGAAAAAGTTGCAGATTGAGATGGGTGAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCTTGAGGAAGGCATTGTCATAGAACTTCATGCTCTTTGGGGTAACAAGTAAGTAATTATTCTATAACAGTCCATTAAGCTTTTCCAAACCCCCTCTTTGGACTCTTTCTTTATGAACTTCCCCTCAAGGTTTTTAAAACGCGTTTGTTAGGAGAGGTTTCCACACCCTTATAAAAAATGTTTCATTCTCACCTCTATAACTGATGTGAGATCACATAATCTGCCAACCTTCGAAGCCCAACATCCTCGTTGGCACTCATTCTTCTCTATAATCGATCGATGTAGGATCCCACATATTTCTCTCTCTAACATTTTTCTTACCCATCTCTCTTAACCAAATGGATAATGTTTTAACTGACAGATGGTCAACCATAGCAAGATATTTACCGGGAAGAACTGATAATGAAATAAAAAATTACTGGAGAACGCATTTCAAGAAGATGAAGCCAAAGAGAGAGGCTCAAATGGTTGTTCCAAAACCAGACAACAAAACATCAGCACCAATCAGCTTTGAACAAGACAGAGAGGAGAAAGATATGATGAAGCTATGTGAAAGAGACAATGCTGAATTAGGGATGGTTTTTACAGAGCCTGCAGCCATGGCGGCTGATCAGAGCTACTTGTCAATGGTGTATGAAGATTTTGCAACTTGGGCGGCAGCTGCGGCGGCGGAAGAGAGCTACTTATGGGGTGGCCTTTGGGAAGATTCAAACAACCTTTTGTAA

mRNA sequence

ATGCCACAACAAGCTTTTTGTTGTTACATAGCAGAAGAAGCTGCAGCAGCAGCAGAAGAAGATATAAAAATGGATGCAGAAGAAAAAGAATGGAGGAAGGGGCCATGGACTCCTGAGGAAGACAAGTTGTTATCTGAATACGTGAAAGTGCATGGCGAAGGAAGATGGACTTCTGTTGCCACTGGTTCACGCTTGAATAGAACAGGAAAAAGTTGCAGATTGAGATGGGTGAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCTTGAGGAAGGCATTGTCATAGAACTTCATGCTCTTTGGGGTAACAAATGGTCAACCATAGCAAGATATTTACCGGGAAGAACTGATAATGAAATAAAAAATTACTGGAGAACGCATTTCAAGAAGATGAAGCCAAAGAGAGAGGCTCAAATGGTTGTTCCAAAACCAGACAACAAAACATCAGCACCAATCAGCTTTGAACAAGACAGAGAGGAGAAAGATATGATGAAGCTATGTGAAAGAGACAATGCTGAATTAGGGATGGTTTTTACAGAGCCTGCAGCCATGGCGGCTGATCAGAGCTACTTGTCAATGGTGTATGAAGATTTTGCAACTTGGGCGGCAGCTGCGGCGGCGGAAGAGAGCTACTTATGGGGTGGCCTTTGGGAAGATTCAAACAACCTTTTGTAA

Coding sequence (CDS)

ATGCCACAACAAGCTTTTTGTTGTTACATAGCAGAAGAAGCTGCAGCAGCAGCAGAAGAAGATATAAAAATGGATGCAGAAGAAAAAGAATGGAGGAAGGGGCCATGGACTCCTGAGGAAGACAAGTTGTTATCTGAATACGTGAAAGTGCATGGCGAAGGAAGATGGACTTCTGTTGCCACTGGTTCACGCTTGAATAGAACAGGAAAAAGTTGCAGATTGAGATGGGTGAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCTTGAGGAAGGCATTGTCATAGAACTTCATGCTCTTTGGGGTAACAAATGGTCAACCATAGCAAGATATTTACCGGGAAGAACTGATAATGAAATAAAAAATTACTGGAGAACGCATTTCAAGAAGATGAAGCCAAAGAGAGAGGCTCAAATGGTTGTTCCAAAACCAGACAACAAAACATCAGCACCAATCAGCTTTGAACAAGACAGAGAGGAGAAAGATATGATGAAGCTATGTGAAAGAGACAATGCTGAATTAGGGATGGTTTTTACAGAGCCTGCAGCCATGGCGGCTGATCAGAGCTACTTGTCAATGGTGTATGAAGATTTTGCAACTTGGGCGGCAGCTGCGGCGGCGGAAGAGAGCTACTTATGGGGTGGCCTTTGGGAAGATTCAAACAACCTTTTGTAA

Protein sequence

MPQQAFCCYIAEEAAAAAEEDIKMDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMVVPKPDNKTSAPISFEQDREEKDMMKLCERDNAELGMVFTEPAAMAADQSYLSMVYEDFATWAAAAAAEESYLWGGLWEDSNNLL

Homology

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BLAST of CmaCh04G028120 vs. Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 3.6e-40
Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 1


Query: 24  MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 83
           M   ++E+RKGPWT +ED LL  +V + G+ RW  VA  S LNRTGKSCRLRWVNYL PG
Sbjct: 1   MKLVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPG 60

Query: 84  LKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQM 143
           LKRG +TP EE +V+ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +++  M
Sbjct: 61  LKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPM 119

[Close]

BLAST of CmaCh04G028120 vs. Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 1


Query: 27  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKR 86
           +E+  RKGPWT +ED LL  +V + G+ RW  +A  S LNRTGKSCRLRWVNYL PGLKR
Sbjct: 3   QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKR 62

Query: 87  GHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRE 140
           G +TP EE +V+ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +++
Sbjct: 63  GKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 115

[Close]

BLAST of CmaCh04G028120 vs. Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-38
Identity = 73/114 (64.04%), Postives = 88/114 (77.19%), Query Frame = 1


Query: 29  KEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRGH 88
           +E RKGPWT +ED  L   V++ GE RW  +A  S LNRTGKSCRLRWVNYL PGLKRG 
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 89  LTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQM 143
           ++P EE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +R++ M
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNM 119

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BLAST of CmaCh04G028120 vs. Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.8e-38
Identity = 73/114 (64.04%), Postives = 85/114 (74.56%), Query Frame = 1


Query: 29  KEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRGH 88
           +E RKGPWT +ED  L   V++ G+ RW  VA  S LNRTGKSCRLRWVNYL PGLK G 
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 89  LTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQM 143
           ++P EE ++IELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +R   M
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGDM 119

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BLAST of CmaCh04G028120 vs. Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.9e-37
Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 1


Query: 28  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRG 87
           E E RKGPWT EED +L  Y+  HG+G W S+A  + L RTGKSCRLRW+NYLRP ++RG
Sbjct: 17  EAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRG 76

Query: 88  HLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 134
           ++TP E+ I++ELHA WGN+WS IA++LPGRTDNEIKN+WRT  +K
Sbjct: 77  NITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQK 122

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BLAST of CmaCh04G028120 vs. TrEMBL
Match: A0A0A0KSK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G641610 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-71
Identity = 137/199 (68.84%), Postives = 155/199 (77.89%), Query Frame = 1


Query: 27  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKR 86
           EE+EWRKGPWT +EDKLL EYVKVHGEGRW SVA GS LNRTGKSCRLRWVNYLRPGLKR
Sbjct: 33  EEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGLKR 92

Query: 87  GHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMVVPK 146
            HLTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+++++V K
Sbjct: 93  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 152

Query: 147 PDNKTSAPISFEQDREEKDMMKLCERDNAELGMVFTEPAAMAADQS--YLSMVYEDFATW 206
            DNKT  P++   +    ++MK  + DN +L MVFTEP AM   +   YLSMVY+D   W
Sbjct: 153 TDNKTMPPVT-RCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLTNW 212

Query: 207 AAAAAAEESYLW--GGLWE 222
           AA    E  + W  GG  E
Sbjct: 213 AAEKKEESLWEWPLGGFRE 230

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BLAST of CmaCh04G028120 vs. TrEMBL
Match: V4STY9_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013466mg PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 121/215 (56.28%), Postives = 148/215 (68.84%), Query Frame = 1


Query: 28  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRG 87
           E+ WRKGPWTPEEDKLL+E+V +HGEGRW+SVA  + LNR+GKSCRLRWVNYLRPGLKRG
Sbjct: 8   EQGWRKGPWTPEEDKLLTEHVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRG 67

Query: 88  HLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMK-----PKREAQM 147
            LTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K      KR+A +
Sbjct: 68  QLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALL 127

Query: 148 VVPKPDNKTSAPISFEQDREEKDMMKLCERDNA-------ELGMVFTEPAAMAADQSYLS 207
           +  K   +       +Q + E +M ++   D         E  M F +P     +QS+ +
Sbjct: 128 LKQKQQQQK------QQQQHEDNMNRVSSNDEKMMSTAEHEKQMAFMQPPMAMENQSWPT 187

Query: 208 MVYEDFATWAA----AAAAEESYLWGGLW--EDSN 225
           M Y+D A+W +     A  +E  LWGGLW  +D+N
Sbjct: 188 M-YQDIASWPSDHHQPAVIDELGLWGGLWTFDDTN 215

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BLAST of CmaCh04G028120 vs. TrEMBL
Match: A0A067FY73_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047854mg PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 121/215 (56.28%), Postives = 148/215 (68.84%), Query Frame = 1


Query: 28  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRG 87
           E+ WRKGPWTPEEDKLL+E+V + GEGRW+SVA  + LNR+GKSCRLRWVNYLRPGLKRG
Sbjct: 8   EQGWRKGPWTPEEDKLLTEHVNLLGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRG 67

Query: 88  HLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMK-----PKREAQM 147
            LTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K      KR+A +
Sbjct: 68  QLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALL 127

Query: 148 VVPKPDNKTSAPISFEQDREEKDMMKLCERDNA-------ELGMVFTEPAAMAADQSYLS 207
           +  K   +       +Q + E +M ++   D         E  M F +PA    +QS+ +
Sbjct: 128 LKQKQQQQK------QQQQHEDNMNRVSSNDEKTMSTAEHEKQMAFMQPAMAMENQSWPT 187

Query: 208 MVYEDFATWAA----AAAAEESYLWGGLW--EDSN 225
           M Y+D A+W +     A  +E  LWGGLW  +D+N
Sbjct: 188 M-YQDIASWPSDHHQPAVIDELGLWGGLWTFDDTN 215

[Close]

BLAST of CmaCh04G028120 vs. TrEMBL
Match: A0A061EFJ9_THECC (Myb domain protein 121 OS=Theobroma cacao GN=TCM_018971 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.0e-54
Identity = 118/214 (55.14%), Postives = 142/214 (66.36%), Query Frame = 1


Query: 25  DAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGL 84
           +A ++ WRKGPWTPEEDKLL+EYV +HGEGRW+SVA  + LNR+GKSCRLRWVNYLRPGL
Sbjct: 8   EAPQQGWRKGPWTPEEDKLLTEYVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGL 67

Query: 85  KRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK------MKPKR 144
           KRGHLTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK       + KR
Sbjct: 68  KRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKKEKSSQKQEKR 127

Query: 145 EAQMVVPKPDNKTSAPISFEQDREEKDMMK-----LCERDNAELGMVFTEPAAMAADQSY 204
           +AQ +  K   +   P    + + +KD MK       E+ N ++  V    A       Y
Sbjct: 128 KAQTLKLKQQLQQQQP----KPQPDKDEMKRVLPVQTEKANTKVSQVTEAQARPEMVFMY 187

Query: 205 LSMVYEDFATWAAAAAAE-------ESYLWGGLW 221
            ++  +     + AAAA        +  LWGGLW
Sbjct: 188 PTLEDQCLPVTSPAAAASWLDQYLVDEGLWGGLW 217

[Close]

BLAST of CmaCh04G028120 vs. TrEMBL
Match: M0ZLR9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001376 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 9.0e-54
Identity = 115/210 (54.76%), Postives = 140/210 (66.67%), Query Frame = 1


Query: 25  DAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGL 84
           +++E+ WRKGPWTPEEDKLLSEYV +HGEGRW+SV+  + LNRTGKSCRLRWVNYLRPGL
Sbjct: 11  NSDEQGWRKGPWTPEEDKLLSEYVNLHGEGRWSSVSRCAGLNRTGKSCRLRWVNYLRPGL 70

Query: 85  KRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMVV 144
           KRGH+TP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFK    K++ + ++
Sbjct: 71  KRGHITPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKTKVVKQDKKKIM 130

Query: 145 PKPDN-------KTSAPISFEQDRE------EKDMMKLCERDN-AELGMVFTEPAAMAAD 204
            +  N       +T   I   +  E      + D M +   +N  E  +V   P   ++D
Sbjct: 131 RQMRNHPQQNYTRTDKKIMSSEAEEVIMIKSDDDNMFISSTNNYDEDPVVELPPVTTSSD 190

Query: 205 QSYLSMVYEDFATWAAAAAAEESYLWGGLW 221
            SY         TW      +E  LWGGLW
Sbjct: 191 TSY---------TWTETFPMDE--LWGGLW 209

[Close]

BLAST of CmaCh04G028120 vs. TAIR10
Match: AT3G30210.1 (AT3G30210.1 myb domain protein 121)

HSP 1 Score: 199.1 bits (505), Expect = 2.9e-51
Identity = 103/205 (50.24%), Postives = 134/205 (65.37%), Query Frame = 1


Query: 27  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKR 86
           +++  RKGPWT EEDKLL+EYV  HGEGRW++VA  + LNR+GKSCRLRWVNYLRPGLKR
Sbjct: 23  QQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKR 82

Query: 87  GHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMVVPK 146
           G +TP EEGI++ELH+LWGNKWSTIARYLPGRTDNEIKNYWRTH+KK +     Q  V K
Sbjct: 83  GQITPQEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSSKQDKVKK 142

Query: 147 PDNKTSAPISFE---QDREEKDMMKLCERDNAELGMVFTEPAAMAADQSYLSMVYED--- 206
             ++    +  +   Q + E    +L  +D+    M       +A+   Y + V++D   
Sbjct: 143 SLSRKQQQVDLKPQPQAQSENHQSQLVSQDH----MNIDNDHNIASSLYYPTSVFDDKLY 202

Query: 207 -----FATWAAAAAAEESYLWGGLW 221
                  T +  +  +E +LWG LW
Sbjct: 203 MPQSVATTSSDHSMIDEGHLWGSLW 223

[Close]

BLAST of CmaCh04G028120 vs. TAIR10
Match: AT4G13480.1 (AT4G13480.1 myb domain protein 79)

HSP 1 Score: 185.7 bits (470), Expect = 3.3e-47
Identity = 82/106 (77.36%), Postives = 91/106 (85.85%), Query Frame = 1


Query: 28  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRG 87
           E+ WRKGPWT EED+LL EYV+VHGEGRW SV+  + L R GKSCRLRWVNYLRP LKRG
Sbjct: 3   EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 88  HLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 134
            +TP EE I++ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHFKK
Sbjct: 63  QITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKK 108

[Close]

BLAST of CmaCh04G028120 vs. TAIR10
Match: AT3G24310.1 (AT3G24310.1 myb domain protein 305)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-46
Identity = 88/137 (64.23%), Postives = 102/137 (74.45%), Query Frame = 1


Query: 28  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRG 87
           E+ WRKGPWT EED+LL +YV++HGEGRW SVA  + L R GKSCRLRWVNYLRP LKRG
Sbjct: 15  EEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRG 74

Query: 88  HLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK--MKPKREAQMVVP 147
            +TP EE I++ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHFKK    P   A+    
Sbjct: 75  QITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPTNSAE---- 134

Query: 148 KPDNKTSAPISFEQDRE 163
           K  N+      F+Q R+
Sbjct: 135 KTKNRILKRQQFQQQRQ 147

[Close]

BLAST of CmaCh04G028120 vs. TAIR10
Match: AT5G59780.3 (AT5G59780.3 myb domain protein 59)

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-41
Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 1


Query: 24  MDAEEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPG 83
           M   ++E+RKGPWT +ED LL  +V + G+ RW  VA  S LNRTGKSCRLRWVNYL PG
Sbjct: 1   MKLVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPG 60

Query: 84  LKRGHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQM 143
           LKRG +TP EE +V+ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +++  M
Sbjct: 61  LKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPM 119

[Close]

BLAST of CmaCh04G028120 vs. TAIR10
Match: AT3G46130.1 (AT3G46130.1 myb domain protein 48)

HSP 1 Score: 161.0 bits (406), Expect = 8.6e-40
Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 1


Query: 27  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKR 86
           +E+  RKGPWT +ED LL  +V + G+ RW  +A  S LNRTGKSCRLRWVNYL PGLKR
Sbjct: 3   QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKR 62

Query: 87  GHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRE 140
           G +TP EE +V+ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +++
Sbjct: 63  GKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 115

[Close]

BLAST of CmaCh04G028120 vs. NCBI nr
Match: gi|659119529|ref|XP_008459705.1| (PREDICTED: transcription factor MYB59-like [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 2.5e-73
Identity = 144/211 (68.25%), Postives = 160/211 (75.83%), Query Frame = 1


Query: 27  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKR 86
           EE+EWRKGPWT EEDKLL EYVKVHGEGRW+SVA GS LNRTGKSCRLRWVNYL+PGLKR
Sbjct: 5   EEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLKPGLKR 64

Query: 87  GHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPK--REAQMVV 146
           GHLTP EEGI+IELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKPK  R++Q++V
Sbjct: 65  GHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPKPRRKSQIIV 124

Query: 147 PKPDNKTSAPISFEQDREEKDMMKLCERDNAELGMVFTEPAAMAADQS--YLSMVYEDFA 206
           PK DNKT  PIS     EE+ M  +   D+ +LGMVFT+P AM   +   YLS VY+D  
Sbjct: 125 PKTDNKTLPPIS---RCEERVMELMKPYDSDDLGMVFTDPTAMEDHEQTYYLSKVYQDLT 184

Query: 207 TW--------AAAAAAEESYLWGGLWEDSNN 226
            W        A  A  EE  LW GLWE   N
Sbjct: 185 NWTVESGAVAAVVAEQEEESLWDGLWEVPEN 212

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BLAST of CmaCh04G028120 vs. NCBI nr
Match: gi|449447677|ref|XP_004141594.1| (PREDICTED: transcription factor MYB59-like [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 3.1e-71
Identity = 137/199 (68.84%), Postives = 155/199 (77.89%), Query Frame = 1


Query: 27  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKR 86
           EE+EWRKGPWT +EDKLL EYVKVHGEGRW SVA GS LNRTGKSCRLRWVNYLRPGLKR
Sbjct: 5   EEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64

Query: 87  GHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMVVPK 146
            HLTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+++++V K
Sbjct: 65  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 124

Query: 147 PDNKTSAPISFEQDREEKDMMKLCERDNAELGMVFTEPAAMAADQS--YLSMVYEDFATW 206
            DNKT  P++   +    ++MK  + DN +L MVFTEP AM   +   YLSMVY+D   W
Sbjct: 125 TDNKTMPPVT-RCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLTNW 184

Query: 207 AAAAAAEESYLW--GGLWE 222
           AA    E  + W  GG  E
Sbjct: 185 AAEKKEESLWEWPLGGFRE 202

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BLAST of CmaCh04G028120 vs. NCBI nr
Match: gi|700197351|gb|KGN52528.1| (hypothetical protein Csa_5G641610 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 3.1e-71
Identity = 137/199 (68.84%), Postives = 155/199 (77.89%), Query Frame = 1


Query: 27  EEKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKR 86
           EE+EWRKGPWT +EDKLL EYVKVHGEGRW SVA GS LNRTGKSCRLRWVNYLRPGLKR
Sbjct: 33  EEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGLKR 92

Query: 87  GHLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKREAQMVVPK 146
            HLTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR+++++V K
Sbjct: 93  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 152

Query: 147 PDNKTSAPISFEQDREEKDMMKLCERDNAELGMVFTEPAAMAADQS--YLSMVYEDFATW 206
            DNKT  P++   +    ++MK  + DN +L MVFTEP AM   +   YLSMVY+D   W
Sbjct: 153 TDNKTMPPVT-RCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLTNW 212

Query: 207 AAAAAAEESYLW--GGLWE 222
           AA    E  + W  GG  E
Sbjct: 213 AAEKKEESLWEWPLGGFRE 230

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BLAST of CmaCh04G028120 vs. NCBI nr
Match: gi|567876715|ref|XP_006430947.1| (hypothetical protein CICLE_v10013466mg, partial [Citrus clementina])

HSP 1 Score: 230.3 bits (586), Expect = 3.3e-57
Identity = 121/215 (56.28%), Postives = 148/215 (68.84%), Query Frame = 1


Query: 28  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRG 87
           E+ WRKGPWTPEEDKLL+E+V +HGEGRW+SVA  + LNR+GKSCRLRWVNYLRPGLKRG
Sbjct: 8   EQGWRKGPWTPEEDKLLTEHVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRG 67

Query: 88  HLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMK-----PKREAQM 147
            LTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K      KR+A +
Sbjct: 68  QLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALL 127

Query: 148 VVPKPDNKTSAPISFEQDREEKDMMKLCERDNA-------ELGMVFTEPAAMAADQSYLS 207
           +  K   +       +Q + E +M ++   D         E  M F +P     +QS+ +
Sbjct: 128 LKQKQQQQK------QQQQHEDNMNRVSSNDEKMMSTAEHEKQMAFMQPPMAMENQSWPT 187

Query: 208 MVYEDFATWAA----AAAAEESYLWGGLW--EDSN 225
           M Y+D A+W +     A  +E  LWGGLW  +D+N
Sbjct: 188 M-YQDIASWPSDHHQPAVIDELGLWGGLWTFDDTN 215

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BLAST of CmaCh04G028120 vs. NCBI nr
Match: gi|568858220|ref|XP_006482652.1| (PREDICTED: transcription factor MYB57 [Citrus sinensis])

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 121/215 (56.28%), Postives = 148/215 (68.84%), Query Frame = 1


Query: 28  EKEWRKGPWTPEEDKLLSEYVKVHGEGRWTSVATGSRLNRTGKSCRLRWVNYLRPGLKRG 87
           E+ WRKGPWTPEEDKLL+E+V + GEGRW+SVA  + LNR+GKSCRLRWVNYLRPGLKRG
Sbjct: 8   EQGWRKGPWTPEEDKLLTEHVNLLGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRG 67

Query: 88  HLTPLEEGIVIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMK-----PKREAQM 147
            LTP EEGI+IELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K      KR+A +
Sbjct: 68  QLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALL 127

Query: 148 VVPKPDNKTSAPISFEQDREEKDMMKLCERDNA-------ELGMVFTEPAAMAADQSYLS 207
           +  K   +       +Q + E +M ++   D         E  M F +PA    +QS+ +
Sbjct: 128 LKQKQQQQK------QQQQHEDNMNRVSSNDEKTMSTAEHEKQMAFMQPAMAMENQSWPT 187

Query: 208 MVYEDFATWAA----AAAAEESYLWGGLW--EDSN 225
           M Y+D A+W +     A  +E  LWGGLW  +D+N
Sbjct: 188 M-YQDIASWPSDHHQPAVIDELGLWGGLWTFDDTN 215

The following BLAST results are available for this feature:

BLAST of CmaCh04G028120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB59_ARATH	3.6e-40	63.87	Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2	[more]
MYB48_ARATH	1.5e-38	64.60	Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1	[more]
MYBA2_ORYSJ	2.0e-38	64.04	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1	[more]
MYBA1_ORYSJ	5.8e-38	64.04	Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1	[more]
MYB21_ARATH	4.9e-37	63.21	Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1	[more]

BLAST of CmaCh04G028120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSK2_CUCSA	2.1e-71	68.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G641610 PE=4 SV=1	[more]
V4STY9_9ROSI	2.3e-57	56.28	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013466mg PE=...	[more]
A0A067FY73_CITSI	1.1e-56	56.28	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047854mg PE=4 SV=1	[more]
A0A061EFJ9_THECC	4.0e-54	55.14	Myb domain protein 121 OS=Theobroma cacao GN=TCM_018971 PE=4 SV=1	[more]
M0ZLR9_SOLTU	9.0e-54	54.76	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001376 PE=4 SV=1	[more]

BLAST of CmaCh04G028120 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G30210.1	2.9e-51	50.24	myb domain protein 121	[more]
AT4G13480.1	3.3e-47	77.36	myb domain protein 79	[more]
AT3G24310.1	1.6e-46	64.23	myb domain protein 305	[more]
AT5G59780.3	2.1e-41	63.87	myb domain protein 59	[more]
AT3G46130.1	8.6e-40	64.60	myb domain protein 48	[more]

BLAST of CmaCh04G028120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119529\|ref\|XP_008459705.1\|	2.5e-73	68.25	PREDICTED: transcription factor MYB59-like [Cucumis melo]	[more]
gi\|449447677\|ref\|XP_004141594.1\|	3.1e-71	68.84	PREDICTED: transcription factor MYB59-like [Cucumis sativus]	[more]
gi\|700197351\|gb\|KGN52528.1\|	3.1e-71	68.84	hypothetical protein Csa_5G641610 [Cucumis sativus]	[more]
gi\|567876715\|ref\|XP_006430947.1\|	3.3e-57	56.28	hypothetical protein CICLE_v10013466mg, partial [Citrus clementina]	[more]
gi\|568858220\|ref\|XP_006482652.1\|	1.6e-56	56.28	PREDICTED: transcription factor MYB57 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G028120.1	CmaCh04G028120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 86..130 score: 9.5E-13coord: 33..80 score: 3.3
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 85..133 score: 1.5E-12coord: 32..82 score: 7.7
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 84..133 score: 3.7E-22coord: 27..83 score: 6.8
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 31..127 score: 7.11
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 85..135 score: 17.972coord: 28..84 score: 24
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 4..167 score: 4.0
None	No IPR available	PANTHER	PTHR10641:SF572	MYB TRANSCRIPTION FACTOR	coord: 4..167 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G028120	Cucsa.238540	Cucumber (Gy14) v1	cgycmaB0663
CmaCh04G028120	Cla016504	Watermelon (97103) v1	cmawmB736
CmaCh04G028120	Csa5G641610	Cucumber (Chinese Long) v2	cmacuB723
CmaCh04G028120	MELO3C022047	Melon (DHL92) v3.5.1	cmameB634
CmaCh04G028120	ClCG11G004940	Watermelon (Charleston Gray)	cmawcgB619
CmaCh04G028120	CSPI05G29540	Wild cucumber (PI 183967)	cmacpiB730
CmaCh04G028120	CmoCh04G029420	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G028120	Lsi03G001860	Bottle gourd (USVL1VR-Ls)	cmalsiB656
CmaCh04G028120	Cp4.1LG01g22460	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G028120	MELO3C022047.2	Melon (DHL92) v3.6.1	cmamedB720
CmaCh04G028120	CsaV3_5G038670	Cucumber (Chinese Long) v3	cmacucB0860
CmaCh04G028120	Cla97C11G211730	Watermelon (97103) v2	cmawmbB724
CmaCh04G028120	Bhi06G000255	Wax gourd	cmawgoB0838
CmaCh04G028120	CsGy5G028980	Cucumber (Gy14) v2	cgybcmaB647

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G028120	Wax gourd	cmawgoB0839
CmaCh04G028120	Cucurbita maxima (Rimu)	cmacmaB324
CmaCh04G028120	Cucumber (Gy14) v1	cgycmaB0275
CmaCh04G028120	Cucurbita moschata (Rifu)	cmacmoB692
CmaCh04G028120	Wild cucumber (PI 183967)	cmacpiB694
CmaCh04G028120	Cucurbita pepo (Zucchini)	cmacpeB705
CmaCh04G028120	Silver-seed gourd	carcmaB0033
CmaCh04G028120	Silver-seed gourd	carcmaB0374
CmaCh04G028120	Cucumber (Chinese Long) v3	cmacucB0816