CSPI05G29540 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G29540
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMYB-related transcription factor
LocationChr5 : 27749216 .. 27750466 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAAAAGAAGAGCAAGAATGGAGGAAGGGACCTTGGACTTCTGAGGAAGATAAGTTGTTGCGTGAATATGTGAAGGTTCACGGGGAAGGAAGATGGAATTATGTTGCCAAAGGTTCAGGTAAAACGTTATTTTGTTTTCGTTTCATCGAACCCTCCAACTTTTAGGATCGATAGAGAAAGGTCATGTCAATTAGTATTATGTTGAGTTAAGTTGTTCACGTTTTGGTGTTTCCTAATTATGATTTGAAACAAATTAGGCATGTTTTTTTTTTTATAATTTATCTTGTAACGTTTTGGTTAAATTAAGAGATGTTTGTTTTATATCATTACAACGTGTCTTAATTAGTTGAACTTATGTGCAATTATACAGTGGAGTACTAGATTGAGATAAATCATAAAATTGTCTTAATATATACACTAAGTCATGCTTAGATTATGTGAAATTTACATATATATATATATATGCCGATTGTTAACGTAAAGTAATTTGTCTTTTATTGTTATTTTTATAGGATTGAATAGGACGGGAAAAAGTTGTAGATTGAGATGGGTGAATTATCTTAGACCAGGTCTCAAGAGATGTCATCTCACTCCTCAAGAGGAAGGAATTATCATCGAACTTCATGCTCTTTGGGGTAACAAGTAAAGGATCTCGTACTTATCACAAATTTCTTAGATAATCGTTTAGTTTTCATTTTTAAAAATTAGGTAATTTATAAACATTACTTGGATAAAAGATATACAAATAGTAAAAGAAATGGAAAGAAAACTAGAAACATAAAATTCAAAAATAGAAAATAACAAATGAAATCGTTCAGAAACAAGACCTATATACGTTTATAATTTTTGATTGACTAATAATTTTTAAATATTCTTTGTAGATGGTCAACCATAGCAAGATATTTACCGGGAAGAACTGACAACGAAATAAAAAATTATTGGAGAACTCATTTCAAGAAGATGAAGCCAAAGAGAAAGTCTAAAATAATGGTTGGGAAAACAGACAACAAAACAATGTCACCAGTTACTAGATGTGAAGAACATGTCATGGAGCTCATGAAACCATATGACAGTGACAATAATGACTTAAGCATGGTTTTTACAGAGCCAACAGCCATGGAAGATCATGAGCAAACCTACTACTTGTCAATGGTGTATCAAGATTTAACAAATTGGGCGGCAGAGAAGAAAGAGGAGAGTTTATGGGATGGCCTTTGGGAGGTTTCAGAGAATGATATCATATGA

mRNA sequence

ATGGAAGGAAAAGAAGAGCAAGAATGGAGGAAGGGACCTTGGACTTCTGAGGAAGATAAGTTGTTGCGTGAATATGTGAAGGTTCACGGGGAAGGAAGATGGAATTATGTTGCCAAAGGTTCAGGATTGAATAGGACGGGAAAAAGTTGTAGATTGAGATGGGTGAATTATCTTAGACCAGGTCTCAAGAGATGTCATCTCACTCCTCAAGAGGAAGGAATTATCATCGAACTTCATGCTCTTTGGGGTAACAAATGGTCAACCATAGCAAGATATTTACCGGGAAGAACTGACAACGAAATAAAAAATTATTGGAGAACTCATTTCAAGAAGATGAAGCCAAAGAGAAAGTCTAAAATAATGGTTGGGAAAACAGACAACAAAACAATGTCACCAGTTACTAGATGTGAAGAACATGTCATGGAGCTCATGAAACCATATGACAGTGACAATAATGACTTAAGCATGGTTTTTACAGAGCCAACAGCCATGGAAGATCATGAGCAAACCTACTACTTGTCAATGGTGTATCAAGATTTAACAAATTGGGCGGCAGAGAAGAAAGAGGAGAGTTTATGGGATGGCCTTTGGGAGGTTTCAGAGAATGATATCATATGA

Coding sequence (CDS)

ATGGAAGGAAAAGAAGAGCAAGAATGGAGGAAGGGACCTTGGACTTCTGAGGAAGATAAGTTGTTGCGTGAATATGTGAAGGTTCACGGGGAAGGAAGATGGAATTATGTTGCCAAAGGTTCAGGATTGAATAGGACGGGAAAAAGTTGTAGATTGAGATGGGTGAATTATCTTAGACCAGGTCTCAAGAGATGTCATCTCACTCCTCAAGAGGAAGGAATTATCATCGAACTTCATGCTCTTTGGGGTAACAAATGGTCAACCATAGCAAGATATTTACCGGGAAGAACTGACAACGAAATAAAAAATTATTGGAGAACTCATTTCAAGAAGATGAAGCCAAAGAGAAAGTCTAAAATAATGGTTGGGAAAACAGACAACAAAACAATGTCACCAGTTACTAGATGTGAAGAACATGTCATGGAGCTCATGAAACCATATGACAGTGACAATAATGACTTAAGCATGGTTTTTACAGAGCCAACAGCCATGGAAGATCATGAGCAAACCTACTACTTGTCAATGGTGTATCAAGATTTAACAAATTGGGCGGCAGAGAAGAAAGAGGAGAGTTTATGGGATGGCCTTTGGGAGGTTTCAGAGAATGATATCATATGA
Homology
[Close]
BLAST of CSPI05G29540 vs. Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.1e-42
Identity = 76/112 (67.86%), Postives = 93/112 (83.04%), Query Frame = 1 

Query: 6   EQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRC 65
           ++E+RKGPWT +ED LL  +V + G+ RW++VAK SGLNRTGKSCRLRWVNYL PGLKR 
Sbjct: 5   QEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRG 64

Query: 66  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK 118
            +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K
Sbjct: 65  KMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 116

[Close]
BLAST of CSPI05G29540 vs. Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.1e-41
Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 1 

Query: 5   EEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64
           +E+  RKGPWT +ED LL  +V + G+ RW+++AK SGLNRTGKSCRLRWVNYL PGLKR
Sbjct: 3   QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKR 62

Query: 65  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM-VG 124
             +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  +    
Sbjct: 63  GKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTS 122

Query: 125 KTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAM-----EDHEQTYYLSMVYQ 184
              N + S VT    +  +        + ++S   T  +       +++E  Y L  +++
Sbjct: 123 SFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVYSLDDIWR 182

[Close]
BLAST of CSPI05G29540 vs. Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 1 

Query: 7   QEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRCH 66
           +E RKGPWT +ED  L   V++ GE RW+++AK SGLNRTGKSCRLRWVNYL PGLKR  
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKI 121
           ++P EE +I+ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +RKS +
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNM 119

[Close]
BLAST of CSPI05G29540 vs. Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-39
Identity = 74/111 (66.67%), Postives = 89/111 (80.18%), Query Frame = 1 

Query: 7   QEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRCH 66
           +E RKGPWT +ED  L   V++ G+ RW++VAK SGLNRTGKSCRLRWVNYL PGLK   
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK 118
           ++P+EE +IIELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +R+
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERR 116

[Close]
BLAST of CSPI05G29540 vs. Swiss-Prot
Match: MYB24_ARATH (Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-38
Identity = 87/209 (41.63%), Postives = 123/209 (58.85%), Query Frame = 1 

Query: 3   GKEEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGL 62
           G  + E RKGPWT EED +L  Y+  HGEG WN +AK +GL RTGKSCRLRW+NYLRP +
Sbjct: 11  GSGDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDV 70

Query: 63  KRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMV 122
           +R ++TP+E+  I+ELHA WGN+WS IA++LPGRTDNEIKN+WRT  +K   K      V
Sbjct: 71  RRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKIQKYIIKSGETTTV 130

Query: 123 GKTDNK------TMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMV 182
           G   ++      T S V    +  M++  P  S  +          A   ++Q  Y + V
Sbjct: 131 GSQSSEFINHHATTSHVMNDTQETMDMYSPTTSYQH----------ASNINQQLNYGNYV 190

Query: 183 YQD---LTNWAAEKKEESLW--DGLWEVS 201
            +    +   + ++ E++ W  D LW ++
Sbjct: 191 PESGSIMMPLSVDQSEQNYWSVDDLWPMN 209

[Close]
BLAST of CSPI05G29540 vs. TrEMBL
Match: A0A0A0KSK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G641610 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-108
Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 1 

Query: 2   EGKEEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPG 61
           +GKEEQEWRKGPWTS+EDKLL EYVKVHGEGRWN VAKGSGLNRTGKSCRLRWVNYLRPG
Sbjct: 30  KGKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPG 89

Query: 62  LKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM 121
           LKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM
Sbjct: 90  LKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM 149

Query: 122 VGKTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLT 181
           VGKTDNKTM PVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLT
Sbjct: 150 VGKTDNKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLT 209

Query: 182 NWAAEKKEESLWD 195
           NWAAEKKEESLW+
Sbjct: 210 NWAAEKKEESLWE 222

[Close]
BLAST of CSPI05G29540 vs. TrEMBL
Match: M0ZLR9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001376 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.4e-55
Identity = 113/206 (54.85%), Postives = 133/206 (64.56%), Query Frame = 1 

Query: 5   EEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64
           +EQ WRKGPWT EEDKLL EYV +HGEGRW+ V++ +GLNRTGKSCRLRWVNYLRPGLKR
Sbjct: 13  DEQGWRKGPWTPEEDKLLSEYVNLHGEGRWSSVSRCAGLNRTGKSCRLRWVNYLRPGLKR 72

Query: 65  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 124
            H+TPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFK    K+  K ++ +
Sbjct: 73  GHITPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKTKVVKQDKKKIMRQ 132

Query: 125 TDNKTMSPVTRCEEHVME------LMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQ 184
             N      TR ++ +M       +M   D DN     +F   T   D +    L  V  
Sbjct: 133 MRNHPQQNYTRTDKKIMSSEAEEVIMIKSDDDN-----MFISSTNNYDEDPVVELPPVTT 192

Query: 185 DLT---NWAAEKKEESLWDGLWEVSE 202
                  W      + LW GLW + +
Sbjct: 193 SSDTSYTWTETFPMDELWGGLWNIDD 213

[Close]
BLAST of CSPI05G29540 vs. TrEMBL
Match: V4STY9_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013466mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-54
Identity = 114/212 (53.77%), Postives = 141/212 (66.51%), Query Frame = 1 

Query: 6   EQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRC 65
           EQ WRKGPWT EEDKLL E+V +HGEGRW+ VA+ +GLNR+GKSCRLRWVNYLRPGLKR 
Sbjct: 8   EQGWRKGPWTPEEDKLLTEHVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRG 67

Query: 66  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKS---KIMV 125
            LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K  +K    K ++
Sbjct: 68  QLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALL 127

Query: 126 GKTDNKTMSPVTRCEEHVMELM----KPYDSDNNDLSMVFTE-PTAMEDHEQTYYLSMVY 185
            K   +      + E+++  +     K   +  ++  M F + P AME+         +Y
Sbjct: 128 LKQKQQQQKQQQQHEDNMNRVSSNDEKMMSTAEHEKQMAFMQPPMAMENQS----WPTMY 187

Query: 186 QDLTNWAAEK------KEESLWDGLWEVSEND 204
           QD+ +W ++        E  LW GLW   + +
Sbjct: 188 QDIASWPSDHHQPAVIDELGLWGGLWTFDDTN 215

[Close]
BLAST of CSPI05G29540 vs. TrEMBL
Match: A0A067JWC7_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_25591 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-53
Identity = 112/210 (53.33%), Postives = 140/210 (66.67%), Query Frame = 1 

Query: 6   EQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRC 65
           EQ WRKGPWT EEDKLL EYVK+HGEGRW+ V++ SGLNR+GKSCRLRWVNYLRPGLKR 
Sbjct: 7   EQVWRKGPWTPEEDKLLAEYVKLHGEGRWSSVSRCSGLNRSGKSCRLRWVNYLRPGLKRG 66

Query: 66  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSK----IM 125
            +TPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK + K++ K    I+
Sbjct: 67  QITPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKKEKKQEKKKGNQIL 126

Query: 126 VG--------KTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYL 185
           +         + + +  + + R  +  ++  K          MVF  PT +E       L
Sbjct: 127 INTQELQKHKEQEQQLGNEMKRVLKGTIQDEKVNHDHQEKQEMVFMCPTNLEHQCLPPAL 186

Query: 186 SMVYQDLTNWAAEKKEES-LWDGLWEVSEN 203
                ++ +WA    ++  LW GLW + ++
Sbjct: 187 MSQADNIASWADFMVDDGLLWGGLWNLDDD 216

[Close]
BLAST of CSPI05G29540 vs. TrEMBL
Match: A0A067FY73_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047854mg PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-53
Identity = 113/211 (53.55%), Postives = 141/211 (66.82%), Query Frame = 1 

Query: 6   EQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRC 65
           EQ WRKGPWT EEDKLL E+V + GEGRW+ VA+ +GLNR+GKSCRLRWVNYLRPGLKR 
Sbjct: 8   EQGWRKGPWTPEEDKLLTEHVNLLGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRG 67

Query: 66  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKS---KIMV 125
            LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K  +K    K ++
Sbjct: 68  QLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALL 127

Query: 126 GKTDNKTMSPVTRCEEHVMELM----KPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQ 185
            K   +      + E+++  +     K   +  ++  M F +P AM    Q++    +YQ
Sbjct: 128 LKQKQQQQKQQQQHEDNMNRVSSNDEKTMSTAEHEKQMAFMQP-AMAMENQSW--PTMYQ 187

Query: 186 DLTNWAAEK------KEESLWDGLWEVSEND 204
           D+ +W ++        E  LW GLW   + +
Sbjct: 188 DIASWPSDHHQPAVIDELGLWGGLWTFDDTN 215

[Close]
BLAST of CSPI05G29540 vs. TAIR10
Match: AT3G30210.1 (AT3G30210.1 myb domain protein 121)

HSP 1 Score: 204.1 bits (518), Expect = 8.1e-53
Identity = 107/209 (51.20%), Postives = 138/209 (66.03%), Query Frame = 1 

Query: 5   EEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64
           ++Q  RKGPWT EEDKLL EYV  HGEGRW+ VAK +GLNR+GKSCRLRWVNYLRPGLKR
Sbjct: 23  QQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKR 82

Query: 65  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 124
             +TPQEEGII+ELH+LWGNKWSTIARYLPGRTDNEIKNYWRTH+KK +     +  V K
Sbjct: 83  GQITPQEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSSKQDKVKK 142

Query: 125 TDNKTM-------SPVTRCEEHVMELMKP--YDSDN-NDLSMVFTEPTAMEDHEQTYYLS 184
           + ++          P  + E H  +L+     + DN ++++     PT++ D +   Y+ 
Sbjct: 143 SLSRKQQQVDLKPQPQAQSENHQSQLVSQDHMNIDNDHNIASSLYYPTSVFDDK--LYMP 202

Query: 185 MVYQDLTNWAAEKKEESLWDGLWEVSEND 204
                 ++  +   E  LW  LW + E+D
Sbjct: 203 QSVATTSSDHSMIDEGHLWGSLWNLDEDD 229

[Close]
BLAST of CSPI05G29540 vs. TAIR10
Match: AT4G13480.1 (AT4G13480.1 myb domain protein 79)

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 84/106 (79.25%), Postives = 93/106 (87.74%), Query Frame = 1 

Query: 6   EQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRC 65
           E+ WRKGPWT+EED+LL EYV+VHGEGRWN V+K +GL R GKSCRLRWVNYLRP LKR 
Sbjct: 3   EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 66  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 112
            +TP EE II+ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHFKK
Sbjct: 63  QITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKK 108

[Close]
BLAST of CSPI05G29540 vs. TAIR10
Match: AT3G24310.1 (AT3G24310.1 myb domain protein 305)

HSP 1 Score: 188.0 bits (476), Expect = 6.0e-48
Identity = 92/144 (63.89%), Postives = 108/144 (75.00%), Query Frame = 1 

Query: 3   GKEEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGL 62
           G  E+ WRKGPWT+EED+LL +YV++HGEGRWN VA+ +GL R GKSCRLRWVNYLRP L
Sbjct: 12  GMVEEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDL 71

Query: 63  KRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKI-M 122
           KR  +TP EE II+ELHA WGN+WSTIAR LPGRTDNEIKNYWRTHFKK   K KS    
Sbjct: 72  KRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKK---KTKSPTNS 131

Query: 123 VGKTDNKTMSPVTRCEEHVMELMK 146
             KT N+ +      ++  MEL +
Sbjct: 132 AEKTKNRILKRQQFQQQRQMELQQ 152

[Close]
BLAST of CSPI05G29540 vs. TAIR10
Match: AT5G59780.3 (AT5G59780.3 myb domain protein 59)

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43
Identity = 76/112 (67.86%), Postives = 93/112 (83.04%), Query Frame = 1 

Query: 6   EQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKRC 65
           ++E+RKGPWT +ED LL  +V + G+ RW++VAK SGLNRTGKSCRLRWVNYL PGLKR 
Sbjct: 5   QEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRG 64

Query: 66  HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK 118
            +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K
Sbjct: 65  KMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 116

[Close]
BLAST of CSPI05G29540 vs. TAIR10
Match: AT3G46130.1 (AT3G46130.1 myb domain protein 48)

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-42
Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 1 

Query: 5   EEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64
           +E+  RKGPWT +ED LL  +V + G+ RW+++AK SGLNRTGKSCRLRWVNYL PGLKR
Sbjct: 3   QEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKR 62

Query: 65  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM-VG 124
             +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  +    
Sbjct: 63  GKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTS 122

Query: 125 KTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAM-----EDHEQTYYLSMVYQ 184
              N + S VT    +  +        + ++S   T  +       +++E  Y L  +++
Sbjct: 123 SFSNCSSSSVTTTTTNTQDTSCHSRKSSGEVSFYDTGGSRSTREMNQENEDVYSLDDIWR 182

[Close]
BLAST of CSPI05G29540 vs. NCBI nr
Match: gi|449447677|ref|XP_004141594.1| (PREDICTED: transcription factor MYB59-like [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-109
Identity = 189/194 (97.42%), Postives = 191/194 (98.45%), Query Frame = 1 

Query: 1   MEGKEEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRP 60
           MEGKEEQEWRKGPWTS+EDKLL EYVKVHGEGRWN VAKGSGLNRTGKSCRLRWVNYLRP
Sbjct: 1   MEGKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKI 120
           GLKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKI
Sbjct: 61  GLKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKI 120

Query: 121 MVGKTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDL 180
           MVGKTDNKTM PVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDL
Sbjct: 121 MVGKTDNKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDL 180

Query: 181 TNWAAEKKEESLWD 195
           TNWAAEKKEESLW+
Sbjct: 181 TNWAAEKKEESLWE 194

[Close]
BLAST of CSPI05G29540 vs. NCBI nr
Match: gi|700197351|gb|KGN52528.1| (hypothetical protein Csa_5G641610 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.7e-108
Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 1 

Query: 2   EGKEEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPG 61
           +GKEEQEWRKGPWTS+EDKLL EYVKVHGEGRWN VAKGSGLNRTGKSCRLRWVNYLRPG
Sbjct: 30  KGKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPG 89

Query: 62  LKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM 121
           LKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM
Sbjct: 90  LKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIM 149

Query: 122 VGKTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLT 181
           VGKTDNKTM PVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLT
Sbjct: 150 VGKTDNKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDLT 209

Query: 182 NWAAEKKEESLWD 195
           NWAAEKKEESLW+
Sbjct: 210 NWAAEKKEESLWE 222

[Close]
BLAST of CSPI05G29540 vs. NCBI nr
Match: gi|659119529|ref|XP_008459705.1| (PREDICTED: transcription factor MYB59-like [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 1.8e-99
Identity = 179/217 (82.49%), Postives = 192/217 (88.48%), Query Frame = 1 

Query: 1   MEGKEEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRP 60
           M+GKEEQEWRKGPWT EEDKLL EYVKVHGEGRW+ VAKGSGLNRTGKSCRLRWVNYL+P
Sbjct: 1   MDGKEEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLKP 60

Query: 61  GLKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPK--RKS 120
           GLKR HLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKPK  RKS
Sbjct: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPKPRRKS 120

Query: 121 KIMVGKTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQ 180
           +I+V KTDNKT+ P++RCEE VMELMKPYDSD  DL MVFT+PTAMEDHEQTYYLS VYQ
Sbjct: 121 QIIVPKTDNKTLPPISRCEERVMELMKPYDSD--DLGMVFTDPTAMEDHEQTYYLSKVYQ 180

Query: 181 DLTNW----------AAEKKEESLWDGLWEVSENDII 206
           DLTNW           AE++EESLWDGLWEV ENDI+
Sbjct: 181 DLTNWTVESGAVAAVVAEQEEESLWDGLWEVPENDIM 215

[Close]
BLAST of CSPI05G29540 vs. NCBI nr
Match: gi|747102046|ref|XP_011099170.1| (PREDICTED: myb-related protein 305 [Sesamum indicum])

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 115/214 (53.74%), Postives = 137/214 (64.02%), Query Frame = 1 

Query: 3   GKEEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGL 62
           G  EQ WRKGPWT EEDKLL EYV+ HGEGRW+ V+K SGLNR+GKSCRLRWVNYLRPGL
Sbjct: 5   GVSEQGWRKGPWTPEEDKLLVEYVRQHGEGRWSCVSKSSGLNRSGKSCRLRWVNYLRPGL 64

Query: 63  KRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKR------ 122
           K+ HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K  R      
Sbjct: 65  KKGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKRKSSRNDQEVK 124

Query: 123 ------KSKIMVGKTDNKTMSPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQT 182
                 K    + + D    +  +   +   E     +  N ++ +       +E+H Q 
Sbjct: 125 RKFHRQKQHHTLQENDKNDSTKASPDCQLAAEATSDREKSNQEMDVRGNVNDNVENHHQL 184

Query: 183 YYLSMVYQDLTNW-AAEKKEESLWDGLWEVSEND 204
             L M+YQD + W      +  LW GLW + + +
Sbjct: 185 LPL-MMYQDSSAWFDFIPADNYLWGGLWNLDDQN 217

[Close]
BLAST of CSPI05G29540 vs. NCBI nr
Match: gi|565343277|ref|XP_006338764.1| (PREDICTED: myb-related protein 340 [Solanum tuberosum])

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 113/206 (54.85%), Postives = 133/206 (64.56%), Query Frame = 1 

Query: 5   EEQEWRKGPWTSEEDKLLREYVKVHGEGRWNYVAKGSGLNRTGKSCRLRWVNYLRPGLKR 64
           +EQ WRKGPWT EEDKLL EYV +HGEGRW+ V++ +GLNRTGKSCRLRWVNYLRPGLKR
Sbjct: 13  DEQGWRKGPWTPEEDKLLSEYVNLHGEGRWSSVSRCAGLNRTGKSCRLRWVNYLRPGLKR 72

Query: 65  CHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMVGK 124
            H+TPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFK    K+  K ++ +
Sbjct: 73  GHITPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKTKVVKQDKKKIMRQ 132

Query: 125 TDNKTMSPVTRCEEHVME------LMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQ 184
             N      TR ++ +M       +M   D DN     +F   T   D +    L  V  
Sbjct: 133 MRNHPQQNYTRTDKKIMSSEAEEVIMIKSDDDN-----MFISSTNNYDEDPVVELPPVTT 192

Query: 185 DLT---NWAAEKKEESLWDGLWEVSE 202
                  W      + LW GLW + +
Sbjct: 193 SSDTSYTWTETFPMDELWGGLWNIDD 213

The following BLAST results are available for this feature:
BLAST of CSPI05G29540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB59_ARATH2.1e-4267.86Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2[more]
MYB48_ARATH5.1e-4145.70Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1[more]
MYBA2_ORYSJ1.1e-4066.67Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1[more]
MYBA1_ORYSJ1.3e-3966.67Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1[more]
MYB24_ARATH2.4e-3841.63Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1[more]
BLAST of CSPI05G29540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSK2_CUCSA1.2e-10896.89Uncharacterized protein OS=Cucumis sativus GN=Csa_5G641610 PE=4 SV=1[more]
M0ZLR9_SOLTU7.4e-5554.85Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001376 PE=4 SV=1[more]
V4STY9_9ROSI1.6e-5453.77Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013466mg PE=... [more]
A0A067JWC7_JATCU1.1e-5353.33MYB family protein OS=Jatropha curcas GN=JCGZ_25591 PE=4 SV=1[more]
A0A067FY73_CITSI1.1e-5353.55Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047854mg PE=4 SV=1[more]
BLAST of CSPI05G29540 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G30210.18.1e-5351.20 myb domain protein 121[more]
AT4G13480.11.6e-4879.25 myb domain protein 79[more]
AT3G24310.16.0e-4863.89 myb domain protein 305[more]
AT5G59780.31.2e-4367.86 myb domain protein 59[more]
AT3G46130.12.9e-4245.70 myb domain protein 48[more]
BLAST of CSPI05G29540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447677|ref|XP_004141594.1|1.5e-10997.42PREDICTED: transcription factor MYB59-like [Cucumis sativus][more]
gi|700197351|gb|KGN52528.1|1.7e-10896.89hypothetical protein Csa_5G641610 [Cucumis sativus][more]
gi|659119529|ref|XP_008459705.1|1.8e-9982.49PREDICTED: transcription factor MYB59-like [Cucumis melo][more]
gi|747102046|ref|XP_011099170.1|1.1e-5453.74PREDICTED: myb-related protein 305 [Sesamum indicum][more]
gi|565343277|ref|XP_006338764.1|1.1e-5454.85PREDICTED: myb-related protein 340 [Solanum tuberosum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009737 response to abscisic acid
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G29540.1CSPI05G29540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 68..108
score: 6.7E-14coord: 11..58
score: 4.5
IPR001005SANT/Myb domainSMARTSM00717santcoord: 10..60
score: 2.2E-15coord: 63..111
score: 3.9
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 12..65
score: 1.0E-22coord: 66..111
score: 2.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 9..105
score: 2.85
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 63..113
score: 19.168coord: 6..62
score: 23
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 5..198
score: 2.5
NoneNo IPR availablePANTHERPTHR10641:SF572MYB TRANSCRIPTION FACTORcoord: 5..198
score: 2.5