Cla016504 (gene) Watermelon (97103) v1

Overview
NameCla016504
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMYB transcription factor (AHRD V1 **** Q9LRU5_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
LocationChr11 : 22030736 .. 22031902 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGAAAAGAAGTACAAGAATGGAGGAAGGGACCTTGGACTTGTGAGGAAGACAAGTTGTTGTGTGAATATGTGAAGGTGCATGGGGAAGGAAGATGGACTTCTGTTGCCAATGGTTCAGGTGATAATTTTATTCTTTTCTTTTTCATCTCTCCCTTTCACAAAATTATGATTTGTTTTAACCTAGTGAATTATGCTCAAGTTACTTATAGTCAATCAGGTTGAAAAAAAAAAATTCAAACAAAGCATCTTAACTATATAGACTTAGATTAGGTGAAATTTCCATATACGTTAGAGTTAGACTATAACAATGCAGCGTAAAGTAATTTGTTTTTTCGGGTTGTTTTTTACAGGCTTGAATAGGACAGGAAAAAGTTGTAGATTGAGATGGGTAAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGTAACAAGTAAAAAATATCTCTCTAACCTAGCTATTTCAATTTCTTCAATAATTATTTTGCTTTTGATTTATTTAAAAATTAAGTTTATACACACTACTCTCACCCACCCATAAATTTCGTTATTTAGTTTATAAAAACTAATTTTTTGTGCTTTAATTTCATTAGAAATTCAAATGTTTCTTTAATATATATATATAATAAAGAAATTAAGAGAAAATTACAAATATAAATTTTAAGAATAGAAAACAAAAGATAAAACGGTTTTCAAATAAATCTAGGGACTTAACCATCTTAATTTTAAATGTTTTCTGTAGATGGTCTACCATAGCAAGATATTTACCCGGAAGAACCGACAACGAAATAAAAAACTATTGGAGAACTCATTTCAAGAAGATGAAACCAAAAAGAAAGACTCAAATAAATGTCCCAAAAACAGCAACAGTCAACAAAACATTTCCACCAATTACTAGCTCTAGAGAATATGGCATGGAGCTGATGAAACCATATGAAAGAGACGATGACTCAGCCATGGTTTTTACAGAGCCTGCAGCCATGGGAGATGAACTAAGCTACTTGTCAATGGTGTATCAAGATTTTGCAACTTGGGCGGCGGAGGCGGCCGCGGAGCAGGAGGAGGAGAGCTTATGGGGTGGCCTTTGGGAGGTCCCAGAGAATGATATCATATGA

mRNA sequence

ATGGATGGAAAAGAAGTACAAGAATGGAGGAAGGGACCTTGGACTTGTGAGGAAGACAAGTTGTTGTGTGAATATGTGAAGGTGCATGGGGAAGGAAGATGGACTTCTGTTGCCAATGGTTCAGGCTTGAATAGGACAGGAAAAAGTTGTAGATTGAGATGGGTAAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGTAACAAATGGTCTACCATAGCAAGATATTTACCCGGAAGAACCGACAACGAAATAAAAAACTATTGGAGAACTCATTTCAAGAAGATGAAACCAAAAAGAAAGACTCAAATAAATGTCCCAAAAACAGCAACAGTCAACAAAACATTTCCACCAATTACTAGCTCTAGAGAATATGGCATGGAGCTGATGAAACCATATGAAAGAGACGATGACTCAGCCATGGTTTTTACAGAGCCTGCAGCCATGGGAGATGAACTAAGCTACTTGTCAATGGTGTATCAAGATTTTGCAACTTGGGCGGCGGAGGCGGCCGCGGAGCAGGAGGAGGAGAGCTTATGGGGTGGCCTTTGGGAGGTCCCAGAGAATGATATCATATGA

Coding sequence (CDS)

ATGGATGGAAAAGAAGTACAAGAATGGAGGAAGGGACCTTGGACTTGTGAGGAAGACAAGTTGTTGTGTGAATATGTGAAGGTGCATGGGGAAGGAAGATGGACTTCTGTTGCCAATGGTTCAGGCTTGAATAGGACAGGAAAAAGTTGTAGATTGAGATGGGTAAATTATCTTAGACCTGGTCTTAAGAGAGGCCATCTCACTCCTCAAGAGGAAGGCATTATCATAGAACTTCATGCTCTTTGGGGTAACAAATGGTCTACCATAGCAAGATATTTACCCGGAAGAACCGACAACGAAATAAAAAACTATTGGAGAACTCATTTCAAGAAGATGAAACCAAAAAGAAAGACTCAAATAAATGTCCCAAAAACAGCAACAGTCAACAAAACATTTCCACCAATTACTAGCTCTAGAGAATATGGCATGGAGCTGATGAAACCATATGAAAGAGACGATGACTCAGCCATGGTTTTTACAGAGCCTGCAGCCATGGGAGATGAACTAAGCTACTTGTCAATGGTGTATCAAGATTTTGCAACTTGGGCGGCGGAGGCGGCCGCGGAGCAGGAGGAGGAGAGCTTATGGGGTGGCCTTTGGGAGGTCCCAGAGAATGATATCATATGA

Protein sequence

MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGDELSYLSMVYQDFATWAAEAAAEQEEESLWGGLWEVPENDII
Homology
[Close]
BLAST of Cla016504 vs. Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 8.0e-42
Identity = 78/123 (63.41%), Postives = 95/123 (77.24%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           +E+RKGPWT +ED LL  +V + G+ RW  VA  SGLNRTGKSCRLRWVNYL PGLKRG 
Sbjct: 6   EEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGK 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           +TPQEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  ++ P ++
Sbjct: 66  MTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMS-PTSS 125

Query: 127 TVN 130
           + N
Sbjct: 126 SSN 127

[Close]
BLAST of Cla016504 vs. Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.2e-41
Identity = 77/129 (59.69%), Postives = 96/129 (74.42%), Query Frame = 1 

Query: 10  RKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHLTP 69
           RKGPWT +ED LL  +V + G+ RW  +A  SGLNRTGKSCRLRWVNYL PGLKRG +TP
Sbjct: 8   RKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTP 67

Query: 70  QEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTATVN 129
           QEE +++ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   ++K  ++ P ++  N
Sbjct: 68  QEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVS-PTSSFSN 127

Query: 130 KTFPPITSS 139
            +   +T++
Sbjct: 128 CSSSSVTTT 135

[Close]
BLAST of Cla016504 vs. Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.8e-41
Identity = 82/141 (58.16%), Postives = 101/141 (71.63%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           +E RKGPWT +ED  L   V++ GE RW  +A  SGLNRTGKSCRLRWVNYL PGLKRG 
Sbjct: 6   EEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGR 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           ++P EE +I+ELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +RK+ ++ P ++
Sbjct: 66  MSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNMS-PSSS 125

Query: 127 TVNKTFP---PITSSREYGME 145
           + + T+    P T S   G+E
Sbjct: 126 SSSLTYQSCHPETPSMIIGIE 145

[Close]
BLAST of Cla016504 vs. Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.8e-39
Identity = 74/111 (66.67%), Postives = 85/111 (76.58%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           +E RKGPWT +ED  L   V++ G+ RW  VA  SGLNRTGKSCRLRWVNYL PGLK G 
Sbjct: 6   EEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGR 65

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK 118
           ++P+EE +IIELHA WGN+WS IAR LPGRTDNEIKNYWRTH +K   +R+
Sbjct: 66  MSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERR 116

[Close]
BLAST of Cla016504 vs. Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-38
Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = 1 

Query: 8   EWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGHL 67
           E RKGPWT EED +L  Y+  HGEG W S+A  +GL RTGKSCRLRW+NYLRP ++RG++
Sbjct: 12  EVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNI 71

Query: 68  TPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK 112
           TP+E+ +I+ELHA WGN+WS IA+ LPGRTDNEIKNYWRT  +K
Sbjct: 72  TPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQK 115

[Close]
BLAST of Cla016504 vs. TrEMBL
Match: A0A0A0KSK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G641610 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.0e-83
Identity = 155/197 (78.68%), Postives = 166/197 (84.26%), Query Frame = 1 

Query: 3   GKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGL 62
           GKE QEWRKGPWT +EDKLLCEYVKVHGEGRW SVA GSGLNRTGKSCRLRWVNYLRPGL
Sbjct: 31  GKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGL 90

Query: 63  KRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINV 122
           KR HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK++I V
Sbjct: 91  KRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMV 150

Query: 123 PKTATVNKTFPPITSSREYGMELMKPYERD-DDSAMVFTEPAAMGD--ELSYLSMVYQDF 182
            KT   NKT PP+T   E+ MELMKPY+ D +D +MVFTEP AM D  +  YLSMVYQD 
Sbjct: 151 GKTD--NKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDL 210

Query: 183 ATWAAEAAAEQEEESLW 197
             W    AAE++EESLW
Sbjct: 211 TNW----AAEKKEESLW 221

[Close]
BLAST of Cla016504 vs. TrEMBL
Match: V4STY9_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013466mg PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 8.0e-57
Identity = 115/202 (56.93%), Postives = 135/202 (66.83%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           Q WRKGPWT EEDKLL E+V +HGEGRW+SVA  +GLNR+GKSCRLRWVNYLRPGLKRG 
Sbjct: 9   QGWRKGPWTPEEDKLLTEHVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRGQ 68

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K  +K +       
Sbjct: 69  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALLL 128

Query: 127 TVNKTFPPITSSREYGMELMKPYER------DDDSAMVFTEPAAMGDELSYLSMVYQDFA 186
              +         E  M  +   +       + +  M F +P    +  S+ +M YQD A
Sbjct: 129 KQKQQQQKQQQQHEDNMNRVSSNDEKMMSTAEHEKQMAFMQPPMAMENQSWPTM-YQDIA 188

Query: 187 TWAAE--AAAEQEEESLWGGLW 201
           +W ++    A  +E  LWGGLW
Sbjct: 189 SWPSDHHQPAVIDELGLWGGLW 209

[Close]
BLAST of Cla016504 vs. TrEMBL
Match: A0A067FY73_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047854mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.0e-56
Identity = 117/205 (57.07%), Postives = 139/205 (67.80%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           Q WRKGPWT EEDKLL E+V + GEGRW+SVA  +GLNR+GKSCRLRWVNYLRPGLKRG 
Sbjct: 9   QGWRKGPWTPEEDKLLTEHVNLLGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRGQ 68

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K  +K +    + A
Sbjct: 69  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQE---KRKA 128

Query: 127 TVNKTFPPITSSREYGMELMKPYERDDDSA---------MVFTEPAAMGDELSYLSMVYQ 186
            + K        ++   + M     +D+           M F +PA   +  S+ +M YQ
Sbjct: 129 LLLKQKQQQQKQQQQHEDNMNRVSSNDEKTMSTAEHEKQMAFMQPAMAMENQSWPTM-YQ 188

Query: 187 DFATWAAE--AAAEQEEESLWGGLW 201
           D A+W ++    A  +E  LWGGLW
Sbjct: 189 DIASWPSDHHQPAVIDELGLWGGLW 209

[Close]
BLAST of Cla016504 vs. TrEMBL
Match: A0A061EFJ9_THECC (Myb domain protein 121 OS=Theobroma cacao GN=TCM_018971 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.6e-55
Identity = 118/211 (55.92%), Postives = 133/211 (63.03%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           Q WRKGPWT EEDKLL EYV +HGEGRW+SVA  +GLNR+GKSCRLRWVNYLRPGLKRGH
Sbjct: 12  QGWRKGPWTPEEDKLLTEYVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRGH 71

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK------MKPKRKTQI 126
           LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK       + KRK Q 
Sbjct: 72  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKKEKSSQKQEKRKAQT 131

Query: 127 NVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGDELSYLSMVYQDFA 186
              K     +   P     E    L    E+ +      TE  A   E+ ++    +D  
Sbjct: 132 LKLKQQLQQQQPKPQPDKDEMKRVLPVQTEKANTKVSQVTEAQAR-PEMVFMYPTLEDQC 191

Query: 187 TWAAEAAAEQE-------EESLWGGLWEVPE 205
                 AA          +E LWGGLW + +
Sbjct: 192 LPVTSPAAAASWLDQYLVDEGLWGGLWNLDD 221

[Close]
BLAST of Cla016504 vs. TrEMBL
Match: W9SN56_9ROSA (Transcription factor OS=Morus notabilis GN=L484_000185 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.6e-55
Identity = 115/216 (53.24%), Postives = 139/216 (64.35%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           Q W+KGPWT EEDKLL EYV +HGEGRW+SVA  +GLNR+GKSCRLRWVNYLRPGLKRG 
Sbjct: 16  QGWKKGPWTPEEDKLLSEYVNLHGEGRWSSVARCAGLNRSGKSCRLRWVNYLRPGLKRGQ 75

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK------MKPKRKTQI 126
           +TPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKN+WRTHFKK       + KR++QI
Sbjct: 76  ITPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNFWRTHFKKKEKSSLKQQKRRSQI 135

Query: 127 NVPK-------TATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAM-----GDE 186
              K           N      T++ E  + +   + +  D      E   M     G +
Sbjct: 136 LKDKFQKDQLQAQQENTHHTKTTTASEEKLNIHDHHHQSQDQTTTTHEHHDMAFSVNGSD 195

Query: 187 LSYLSMVYQDFATWAAEAAAEQEEESLWGGLWEVPE 205
              L ++YQD  + +   A   +E  LWGGLW + +
Sbjct: 196 HQCLPVMYQDLVSCSWYDATPDQEYVLWGGLWNLDD 231

[Close]
BLAST of Cla016504 vs. NCBI nr
Match: gi|659119529|ref|XP_008459705.1| (PREDICTED: transcription factor MYB59-like [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-90
Identity = 169/218 (77.52%), Postives = 179/218 (82.11%), Query Frame = 1 

Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           MDGKE QEWRKGPWT EEDKLLCEYVKVHGEGRW+SVA GSGLNRTGKSCRLRWVNYL+P
Sbjct: 1   MDGKEEQEWRKGPWTVEEDKLLCEYVKVHGEGRWSSVAKGSGLNRTGKSCRLRWVNYLKP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPK--RKT 120
           GLKRGHLTPQEEGIIIELHALWGNKWSTIA+YLPGRTDNEIKNYWRTHFKKMKPK  RK+
Sbjct: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIAKYLPGRTDNEIKNYWRTHFKKMKPKPRRKS 120

Query: 121 QINVPKTATVNKTFPPITSSREYGMELMKPYERDDDSAMVFTEPAAMGD--ELSYLSMVY 180
           QI VPKT   NKT PPI+   E  MELMKPY+  DD  MVFT+P AM D  +  YLS VY
Sbjct: 121 QIIVPKTD--NKTLPPISRCEERVMELMKPYD-SDDLGMVFTDPTAMEDHEQTYYLSKVY 180

Query: 181 QDFATWAAEA------AAEQEEESLWGGLWEVPENDII 209
           QD   W  E+       AEQEEESLW GLWEVPENDI+
Sbjct: 181 QDLTNWTVESGAVAAVVAEQEEESLWDGLWEVPENDIM 215

[Close]
BLAST of Cla016504 vs. NCBI nr
Match: gi|449447677|ref|XP_004141594.1| (PREDICTED: transcription factor MYB59-like [Cucumis sativus])

HSP 1 Score: 318.2 bits (814), Expect = 1.1e-83
Identity = 156/199 (78.39%), Postives = 168/199 (84.42%), Query Frame = 1 

Query: 1   MDGKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRP 60
           M+GKE QEWRKGPWT +EDKLLCEYVKVHGEGRW SVA GSGLNRTGKSCRLRWVNYLRP
Sbjct: 1   MEGKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRP 60

Query: 61  GLKRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQI 120
           GLKR HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK++I
Sbjct: 61  GLKRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKI 120

Query: 121 NVPKTATVNKTFPPITSSREYGMELMKPYERD-DDSAMVFTEPAAMGD--ELSYLSMVYQ 180
            V KT   NKT PP+T   E+ MELMKPY+ D +D +MVFTEP AM D  +  YLSMVYQ
Sbjct: 121 MVGKTD--NKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQ 180

Query: 181 DFATWAAEAAAEQEEESLW 197
           D   W    AAE++EESLW
Sbjct: 181 DLTNW----AAEKKEESLW 193

[Close]
BLAST of Cla016504 vs. NCBI nr
Match: gi|700197351|gb|KGN52528.1| (hypothetical protein Csa_5G641610 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 7.1e-83
Identity = 155/197 (78.68%), Postives = 166/197 (84.26%), Query Frame = 1 

Query: 3   GKEVQEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGL 62
           GKE QEWRKGPWT +EDKLLCEYVKVHGEGRW SVA GSGLNRTGKSCRLRWVNYLRPGL
Sbjct: 31  GKEEQEWRKGPWTSDEDKLLCEYVKVHGEGRWNSVAKGSGLNRTGKSCRLRWVNYLRPGL 90

Query: 63  KRGHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINV 122
           KR HLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRK++I V
Sbjct: 91  KRCHLTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKSKIMV 150

Query: 123 PKTATVNKTFPPITSSREYGMELMKPYERD-DDSAMVFTEPAAMGD--ELSYLSMVYQDF 182
            KT   NKT PP+T   E+ MELMKPY+ D +D +MVFTEP AM D  +  YLSMVYQD 
Sbjct: 151 GKTD--NKTMPPVTRCEEHVMELMKPYDSDNNDLSMVFTEPTAMEDHEQTYYLSMVYQDL 210

Query: 183 ATWAAEAAAEQEEESLW 197
             W    AAE++EESLW
Sbjct: 211 TNW----AAEKKEESLW 221

[Close]
BLAST of Cla016504 vs. NCBI nr
Match: gi|567876715|ref|XP_006430947.1| (hypothetical protein CICLE_v10013466mg, partial [Citrus clementina])

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56
Identity = 115/202 (56.93%), Postives = 135/202 (66.83%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           Q WRKGPWT EEDKLL E+V +HGEGRW+SVA  +GLNR+GKSCRLRWVNYLRPGLKRG 
Sbjct: 9   QGWRKGPWTPEEDKLLTEHVNLHGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRGQ 68

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K  +K +       
Sbjct: 69  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQEKRKALLL 128

Query: 127 TVNKTFPPITSSREYGMELMKPYER------DDDSAMVFTEPAAMGDELSYLSMVYQDFA 186
              +         E  M  +   +       + +  M F +P    +  S+ +M YQD A
Sbjct: 129 KQKQQQQKQQQQHEDNMNRVSSNDEKMMSTAEHEKQMAFMQPPMAMENQSWPTM-YQDIA 188

Query: 187 TWAAE--AAAEQEEESLWGGLW 201
           +W ++    A  +E  LWGGLW
Sbjct: 189 SWPSDHHQPAVIDELGLWGGLW 209

[Close]
BLAST of Cla016504 vs. NCBI nr
Match: gi|568858220|ref|XP_006482652.1| (PREDICTED: transcription factor MYB57 [Citrus sinensis])

HSP 1 Score: 226.5 bits (576), Expect = 4.3e-56
Identity = 117/205 (57.07%), Postives = 139/205 (67.80%), Query Frame = 1 

Query: 7   QEWRKGPWTCEEDKLLCEYVKVHGEGRWTSVANGSGLNRTGKSCRLRWVNYLRPGLKRGH 66
           Q WRKGPWT EEDKLL E+V + GEGRW+SVA  +GLNR+GKSCRLRWVNYLRPGLKRG 
Sbjct: 9   QGWRKGPWTPEEDKLLTEHVNLLGEGRWSSVARSAGLNRSGKSCRLRWVNYLRPGLKRGQ 68

Query: 67  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKMKPKRKTQINVPKTA 126
           LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKK K  +K +    + A
Sbjct: 69  LTPQEEGIIIELHALWGNKWSTIARYLPGRTDNEIKNYWRTHFKKEKSSQKQE---KRKA 128

Query: 127 TVNKTFPPITSSREYGMELMKPYERDDDSA---------MVFTEPAAMGDELSYLSMVYQ 186
            + K        ++   + M     +D+           M F +PA   +  S+ +M YQ
Sbjct: 129 LLLKQKQQQQKQQQQHEDNMNRVSSNDEKTMSTAEHEKQMAFMQPAMAMENQSWPTM-YQ 188

Query: 187 DFATWAAE--AAAEQEEESLWGGLW 201
           D A+W ++    A  +E  LWGGLW
Sbjct: 189 DIASWPSDHHQPAVIDELGLWGGLW 209

The following BLAST results are available for this feature:
BLAST of Cla016504 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB59_ARATH8.0e-4263.41Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2[more]
MYB48_ARATH5.2e-4159.69Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1[more]
MYBA2_ORYSJ8.8e-4158.16Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1[more]
MYBA1_ORYSJ4.8e-3966.67Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1[more]
MYB05_ANTMA1.4e-3866.35Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1[more]
BLAST of Cla016504 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSK2_CUCSA5.0e-8378.68Uncharacterized protein OS=Cucumis sativus GN=Csa_5G641610 PE=4 SV=1[more]
V4STY9_9ROSI8.0e-5756.93Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10013466mg PE=... [more]
A0A067FY73_CITSI3.0e-5657.07Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047854mg PE=4 SV=1[more]
A0A061EFJ9_THECC2.6e-5555.92Myb domain protein 121 OS=Theobroma cacao GN=TCM_018971 PE=4 SV=1[more]
W9SN56_9ROSA2.6e-5553.24Transcription factor OS=Morus notabilis GN=L484_000185 PE=4 SV=1[more]
BLAST of Cla016504 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119529|ref|XP_008459705.1|1.6e-9077.52PREDICTED: transcription factor MYB59-like [Cucumis melo][more]
gi|449447677|ref|XP_004141594.1|1.1e-8378.39PREDICTED: transcription factor MYB59-like [Cucumis sativus][more]
gi|700197351|gb|KGN52528.1|7.1e-8378.68hypothetical protein Csa_5G641610 [Cucumis sativus][more]
gi|567876715|ref|XP_006430947.1|1.1e-5656.93hypothetical protein CICLE_v10013466mg, partial [Citrus clementina][more]
gi|568858220|ref|XP_006482652.1|4.3e-5657.07PREDICTED: transcription factor MYB57 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009737 response to abscisic acid
cellular_component GO:0005575 cellular_component
cellular_component GO:0000785 chromatin
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016504Cla016504.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 64..108
score: 2.5E-14coord: 11..58
score: 1.3
IPR001005SANT/Myb domainSMARTSM00717santcoord: 63..111
score: 7.9E-14coord: 10..60
score: 1.4
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 12..65
score: 3.9E-22coord: 66..111
score: 1.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 9..105
score: 5.62
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 1..58
score: 17.303coord: 59..113
score: 23
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 7..201
score: 1.6
NoneNo IPR availablePANTHERPTHR10641:SF572MYB TRANSCRIPTION FACTORcoord: 7..201
score: 1.6